Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47863.t1 | AET04392.2 | 98.1 | 320 | 6 | 0 | 11 | 330 | 3 | 322 | 4.70E-176 | 627.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47863.t1 | Q9FVJ3 | 72.3 | 328 | 82 | 2 | 11 | 329 | 9 | 336 | 1.5e-135 | 483.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47863.t1 | G7L835 | 98.1 | 320 | 6 | 0 | 11 | 330 | 3 | 322 | 3.4e-176 | 627.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47863 | MS.gene03069 | PPI |
| MS.gene74542 | MS.gene47863 | PPI |
| MS.gene47863 | MS.gene071746 | PPI |
| MS.gene40748 | MS.gene47863 | PPI |
| MS.gene034468 | MS.gene47863 | PPI |
| MS.gene02100 | MS.gene47863 | PPI |
| MS.gene016627 | MS.gene47863 | PPI |
| MS.gene84339 | MS.gene47863 | PPI |
| MS.gene039700 | MS.gene47863 | PPI |
| MS.gene03069 | MS.gene47863 | PPI |
| MS.gene66767 | MS.gene47863 | PPI |
| MS.gene43051 | MS.gene47863 | PPI |
| MS.gene003302 | MS.gene47863 | PPI |
| MS.gene27907 | MS.gene47863 | PPI |
| MS.gene20985 | MS.gene47863 | PPI |
| MS.gene85519 | MS.gene47863 | PPI |
| MS.gene058821 | MS.gene47863 | PPI |
| MS.gene47863 | MS.gene058831 | PPI |
| MS.gene90412 | MS.gene47863 | PPI |
| MS.gene21056 | MS.gene47863 | PPI |
| MS.gene92445 | MS.gene47863 | PPI |
| MS.gene005346 | MS.gene47863 | PPI |
| MS.gene058831 | MS.gene47863 | PPI |
| MS.gene023667 | MS.gene47863 | PPI |
| MS.gene90413 | MS.gene47863 | PPI |
| MS.gene050322 | MS.gene47863 | PPI |
| MS.gene007227 | MS.gene47863 | PPI |
| MS.gene056211 | MS.gene47863 | PPI |
| MS.gene35396 | MS.gene47863 | PPI |
| MS.gene47863 | MS.gene023667 | PPI |
| MS.gene65789 | MS.gene47863 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47863.t1 | MTR_8g088320 | 97.819 | 321 | 7 | 0 | 10 | 330 | 2 | 322 | 0.0 | 654 |
| MS.gene47863.t1 | MTR_2g030230 | 78.419 | 329 | 69 | 2 | 2 | 330 | 3 | 329 | 0.0 | 537 |
| MS.gene47863.t1 | MTR_3g017500 | 45.559 | 349 | 152 | 3 | 17 | 328 | 21 | 368 | 2.19e-112 | 331 |
| MS.gene47863.t1 | MTR_3g017500 | 45.559 | 349 | 152 | 3 | 17 | 328 | 51 | 398 | 8.08e-112 | 330 |
| MS.gene47863.t1 | MTR_8g038400 | 44.571 | 350 | 157 | 2 | 16 | 328 | 16 | 365 | 2.86e-109 | 323 |
| MS.gene47863.t1 | MTR_8g107340 | 39.205 | 176 | 106 | 1 | 153 | 328 | 1 | 175 | 5.33e-42 | 144 |
| MS.gene47863.t1 | MTR_6g069470 | 43.750 | 160 | 89 | 1 | 169 | 328 | 13 | 171 | 5.40e-42 | 144 |
| MS.gene47863.t1 | MTR_2g027100 | 45.783 | 166 | 77 | 2 | 169 | 327 | 1 | 160 | 6.61e-41 | 140 |
| MS.gene47863.t1 | MTR_3g067585 | 43.125 | 160 | 90 | 1 | 169 | 328 | 1 | 159 | 1.31e-40 | 140 |
| MS.gene47863.t1 | MTR_2g011590 | 40.764 | 157 | 92 | 1 | 172 | 328 | 3 | 158 | 1.62e-39 | 137 |
| MS.gene47863.t1 | MTR_1g031650 | 44.304 | 158 | 86 | 2 | 172 | 328 | 5 | 161 | 3.71e-36 | 129 |
| MS.gene47863.t1 | MTR_4g084280 | 40.625 | 160 | 94 | 1 | 169 | 328 | 1 | 159 | 1.64e-34 | 124 |
| MS.gene47863.t1 | MTR_8g464390 | 39.597 | 149 | 74 | 4 | 17 | 159 | 16 | 154 | 8.43e-28 | 113 |
| MS.gene47863.t1 | MTR_2g080950 | 44.828 | 116 | 56 | 2 | 17 | 132 | 16 | 123 | 7.24e-27 | 110 |
| MS.gene47863.t1 | MTR_6g080710 | 35.323 | 201 | 97 | 5 | 20 | 219 | 19 | 187 | 2.89e-26 | 105 |
| MS.gene47863.t1 | MTR_1g031650 | 42.742 | 124 | 70 | 1 | 205 | 328 | 2 | 124 | 1.41e-23 | 94.7 |
| MS.gene47863.t1 | MTR_1g069000 | 46.739 | 92 | 47 | 2 | 14 | 104 | 1 | 91 | 3.77e-21 | 94.4 |
| MS.gene47863.t1 | MTR_7g099830 | 45.455 | 88 | 47 | 1 | 14 | 101 | 1 | 87 | 1.21e-20 | 92.4 |
| MS.gene47863.t1 | MTR_7g020860 | 41.538 | 130 | 51 | 5 | 29 | 134 | 514 | 642 | 1.92e-20 | 92.8 |
| MS.gene47863.t1 | MTR_8g100100 | 35.507 | 138 | 64 | 3 | 29 | 142 | 512 | 648 | 8.10e-19 | 87.8 |
| MS.gene47863.t1 | MTR_8g100100 | 35.507 | 138 | 64 | 3 | 29 | 142 | 506 | 642 | 8.38e-19 | 87.8 |
| MS.gene47863.t1 | MTR_7g020860 | 43.220 | 118 | 42 | 5 | 32 | 125 | 517 | 633 | 9.82e-19 | 87.4 |
| MS.gene47863.t1 | MTR_8g067080 | 41.772 | 79 | 45 | 1 | 20 | 98 | 13 | 90 | 3.55e-17 | 82.0 |
| MS.gene47863.t1 | MTR_8g067080 | 41.772 | 79 | 45 | 1 | 20 | 98 | 13 | 90 | 3.72e-17 | 82.0 |
| MS.gene47863.t1 | MTR_8g471110 | 41.772 | 79 | 45 | 1 | 20 | 98 | 13 | 90 | 3.72e-17 | 82.0 |
| MS.gene47863.t1 | MTR_4g074170 | 38.532 | 109 | 55 | 3 | 29 | 126 | 491 | 598 | 5.15e-17 | 82.4 |
| MS.gene47863.t1 | MTR_8g067090 | 38.614 | 101 | 57 | 4 | 20 | 119 | 13 | 109 | 6.05e-17 | 81.3 |
| MS.gene47863.t1 | MTR_8g471120 | 38.614 | 101 | 57 | 4 | 20 | 119 | 13 | 109 | 6.05e-17 | 81.3 |
| MS.gene47863.t1 | MTR_3g098680 | 40.777 | 103 | 54 | 3 | 29 | 125 | 509 | 610 | 3.40e-16 | 80.1 |
| MS.gene47863.t1 | MTR_8g464390 | 35.398 | 113 | 57 | 4 | 53 | 159 | 1 | 103 | 9.42e-13 | 68.9 |
| MS.gene47863.t1 | MTR_2g080950 | 41.250 | 80 | 39 | 2 | 53 | 132 | 1 | 72 | 8.21e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47863.t1 | AT4G21160 | 71.818 | 330 | 84 | 2 | 10 | 330 | 8 | 337 | 0.0 | 507 |
| MS.gene47863.t1 | AT4G21160 | 71.818 | 330 | 84 | 2 | 10 | 330 | 8 | 337 | 0.0 | 507 |
| MS.gene47863.t1 | AT4G21160 | 71.818 | 330 | 84 | 2 | 10 | 330 | 8 | 337 | 0.0 | 507 |
| MS.gene47863.t1 | AT4G21160 | 71.818 | 330 | 84 | 2 | 10 | 330 | 8 | 337 | 0.0 | 507 |
| MS.gene47863.t1 | AT4G05330 | 69.643 | 336 | 94 | 2 | 3 | 330 | 1 | 336 | 2.17e-178 | 497 |
| MS.gene47863.t1 | AT4G05330 | 69.643 | 336 | 94 | 2 | 3 | 330 | 1 | 336 | 2.17e-178 | 497 |
| MS.gene47863.t1 | AT4G05330 | 70.847 | 295 | 78 | 2 | 44 | 330 | 7 | 301 | 2.32e-157 | 442 |
| MS.gene47863.t1 | AT3G07940 | 47.774 | 337 | 151 | 2 | 17 | 328 | 47 | 383 | 1.57e-113 | 334 |
| MS.gene47863.t1 | AT3G07940 | 47.642 | 212 | 86 | 2 | 19 | 205 | 49 | 260 | 1.60e-63 | 202 |
| MS.gene47863.t1 | AT1G73580 | 43.558 | 163 | 91 | 1 | 166 | 328 | 1 | 162 | 1.02e-40 | 140 |
| MS.gene47863.t1 | AT5G37740 | 43.558 | 163 | 88 | 2 | 169 | 328 | 1 | 162 | 1.92e-40 | 140 |
| MS.gene47863.t1 | AT1G70790 | 46.753 | 154 | 81 | 1 | 173 | 325 | 6 | 159 | 2.82e-40 | 140 |
| MS.gene47863.t1 | AT1G70790 | 46.753 | 154 | 81 | 1 | 173 | 325 | 6 | 159 | 2.82e-40 | 140 |
| MS.gene47863.t1 | AT1G70790 | 46.753 | 154 | 81 | 1 | 173 | 325 | 6 | 159 | 2.82e-40 | 140 |
| MS.gene47863.t1 | AT3G17980 | 40.625 | 160 | 94 | 1 | 169 | 328 | 13 | 171 | 2.88e-39 | 137 |
| MS.gene47863.t1 | AT2G01540 | 42.208 | 154 | 88 | 1 | 173 | 325 | 6 | 159 | 2.18e-37 | 132 |
| MS.gene47863.t1 | AT1G70800 | 39.241 | 158 | 95 | 1 | 169 | 326 | 10 | 166 | 4.29e-37 | 131 |
| MS.gene47863.t1 | AT5G37740 | 41.040 | 173 | 88 | 3 | 169 | 328 | 1 | 172 | 4.42e-37 | 131 |
| MS.gene47863.t1 | AT1G70810 | 39.375 | 160 | 96 | 1 | 169 | 328 | 1 | 159 | 9.66e-37 | 130 |
| MS.gene47863.t1 | AT1G48590 | 39.375 | 160 | 96 | 1 | 169 | 328 | 6 | 164 | 6.07e-36 | 128 |
| MS.gene47863.t1 | AT1G48590 | 39.375 | 160 | 96 | 1 | 169 | 328 | 6 | 164 | 6.07e-36 | 128 |
| MS.gene47863.t1 | AT1G48590 | 39.375 | 160 | 96 | 1 | 169 | 328 | 37 | 195 | 7.61e-36 | 129 |
| MS.gene47863.t1 | AT1G66360 | 41.615 | 161 | 93 | 1 | 169 | 328 | 1 | 161 | 9.04e-36 | 128 |
| MS.gene47863.t1 | AT5G47710 | 40.606 | 165 | 85 | 2 | 169 | 326 | 1 | 159 | 1.14e-34 | 124 |
| MS.gene47863.t1 | AT5G47710 | 40.606 | 165 | 85 | 2 | 169 | 326 | 1 | 159 | 1.14e-34 | 124 |
| MS.gene47863.t1 | AT5G47710 | 40.606 | 165 | 85 | 2 | 169 | 326 | 1 | 159 | 1.14e-34 | 124 |
| MS.gene47863.t1 | AT5G47710 | 40.606 | 165 | 85 | 2 | 169 | 326 | 1 | 159 | 1.14e-34 | 124 |
| MS.gene47863.t1 | AT1G23140 | 35.000 | 160 | 103 | 1 | 169 | 328 | 1 | 159 | 2.42e-31 | 116 |
| MS.gene47863.t1 | AT3G17660 | 39.231 | 130 | 69 | 3 | 5 | 132 | 2 | 123 | 2.38e-29 | 111 |
| MS.gene47863.t1 | AT3G17660 | 39.231 | 130 | 69 | 3 | 5 | 132 | 2 | 123 | 8.18e-29 | 111 |
| MS.gene47863.t1 | AT3G17660 | 39.231 | 130 | 69 | 3 | 5 | 132 | 2 | 123 | 1.96e-28 | 110 |
| MS.gene47863.t1 | AT5G54310 | 38.406 | 138 | 75 | 3 | 5 | 140 | 2 | 131 | 4.93e-27 | 111 |
| MS.gene47863.t1 | AT1G70790 | 43.333 | 120 | 67 | 1 | 207 | 325 | 3 | 122 | 2.38e-25 | 99.8 |
| MS.gene47863.t1 | AT1G48590 | 31.250 | 160 | 77 | 2 | 169 | 328 | 37 | 163 | 5.84e-22 | 91.3 |
| MS.gene47863.t1 | AT3G17660 | 33.846 | 130 | 66 | 3 | 5 | 132 | 2 | 113 | 4.06e-20 | 87.8 |
| MS.gene47863.t1 | AT2G37550 | 44.318 | 88 | 48 | 1 | 14 | 101 | 1 | 87 | 1.45e-19 | 89.4 |
| MS.gene47863.t1 | AT2G37550 | 44.318 | 88 | 48 | 1 | 14 | 101 | 1 | 87 | 1.45e-19 | 89.4 |
| MS.gene47863.t1 | AT3G53710 | 43.182 | 88 | 49 | 1 | 14 | 101 | 1 | 87 | 1.65e-19 | 89.4 |
| MS.gene47863.t1 | AT3G53710 | 43.182 | 88 | 49 | 1 | 14 | 101 | 1 | 87 | 1.65e-19 | 89.4 |
| MS.gene47863.t1 | AT3G53710 | 43.182 | 88 | 49 | 1 | 14 | 101 | 1 | 87 | 1.65e-19 | 89.4 |
| MS.gene47863.t1 | AT2G35210 | 40.594 | 101 | 55 | 3 | 20 | 119 | 13 | 109 | 6.86e-19 | 86.7 |
| MS.gene47863.t1 | AT2G35210 | 40.594 | 101 | 55 | 3 | 20 | 119 | 13 | 109 | 1.16e-18 | 86.3 |
| MS.gene47863.t1 | AT5G13300 | 37.500 | 128 | 58 | 4 | 29 | 135 | 513 | 639 | 1.32e-18 | 87.4 |
| MS.gene47863.t1 | AT1G60860 | 35.570 | 149 | 76 | 5 | 29 | 158 | 308 | 455 | 2.30e-18 | 86.3 |
| MS.gene47863.t1 | AT1G60860 | 35.570 | 149 | 76 | 5 | 29 | 158 | 368 | 515 | 2.98e-18 | 85.9 |
| MS.gene47863.t1 | AT1G60860 | 35.570 | 149 | 76 | 5 | 29 | 158 | 479 | 626 | 3.32e-18 | 85.9 |
| MS.gene47863.t1 | AT1G10870 | 29.231 | 195 | 110 | 7 | 29 | 208 | 479 | 660 | 6.83e-18 | 85.1 |
| MS.gene47863.t1 | AT1G10870 | 30.000 | 200 | 107 | 8 | 29 | 208 | 479 | 665 | 1.21e-17 | 84.3 |
| MS.gene47863.t1 | AT5G46750 | 43.750 | 80 | 44 | 1 | 20 | 99 | 13 | 91 | 2.68e-17 | 82.4 |
| MS.gene47863.t1 | AT5G61980 | 46.053 | 76 | 38 | 2 | 29 | 102 | 510 | 584 | 8.23e-17 | 82.0 |
| MS.gene47863.t1 | AT4G17890 | 40.777 | 103 | 53 | 4 | 18 | 119 | 17 | 112 | 9.10e-17 | 80.9 |
| MS.gene47863.t1 | AT4G17890 | 39.604 | 101 | 56 | 3 | 20 | 119 | 16 | 112 | 1.25e-16 | 80.5 |
| MS.gene47863.t1 | AT3G17660 | 37.500 | 80 | 42 | 2 | 53 | 132 | 1 | 72 | 1.65e-12 | 65.9 |
Find 63 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATAGACGGTTGGAATT+TGG | 0.165631 | 4.4:-12752208 | MS.gene47863:CDS |
| GCCATTGCAGAATTTATTAA+AGG | 0.185985 | 4.4:+12749153 | None:intergenic |
| TGTAACCTTACCAAACTTAT+TGG | 0.212227 | 4.4:+12749548 | None:intergenic |
| AAGAAGATTGAAGGATTTAT+TGG | 0.242961 | 4.4:-12751661 | MS.gene47863:CDS |
| GAAGGAATGGTAGAATTTAT+TGG | 0.252239 | 4.4:-12749876 | MS.gene47863:CDS |
| ATTCTCCACATTCGACATTC+TGG | 0.255352 | 4.4:+12748998 | None:intergenic |
| GAATAAACTTACGCCCATTT+AGG | 0.255700 | 4.4:+12751594 | None:intergenic |
| GTAGTGCTCCGGATCCTAAA+TGG | 0.293236 | 4.4:-12751608 | MS.gene47863:CDS |
| GTTCTCAGCTGATGATATAA+TGG | 0.298232 | 4.4:-12749199 | MS.gene47863:CDS |
| TTGTCCGTTCCTCAGCAATT+TGG | 0.300614 | 4.4:-12749572 | MS.gene47863:CDS |
| GCAATGGCATTTGGAGATAC+TGG | 0.302939 | 4.4:-12749138 | MS.gene47863:CDS |
| ATAAATTCTGCAATGGCATT+TGG | 0.314753 | 4.4:-12749147 | MS.gene47863:CDS |
| ACAATAGACGGTTGGAATTT+GGG | 0.317344 | 4.4:-12752207 | MS.gene47863:CDS |
| ATCTAGTGGTTCAAAGAATA+TGG | 0.320374 | 4.4:-12750077 | MS.gene47863:intron |
| TTCTTCAGGTCAGCAAATAT+TGG | 0.330231 | 4.4:-12751385 | MS.gene47863:intron |
| GGAGTAATTTGAATCCAGTT+TGG | 0.344163 | 4.4:-12749610 | MS.gene47863:CDS |
| GCAATTTGGACCAATAAGTT+TGG | 0.353128 | 4.4:-12749558 | MS.gene47863:intron |
| ATGATATGCGAATAGGAAAA+TGG | 0.364855 | 4.4:-12749107 | MS.gene47863:CDS |
| TCATGACTGGCGTCTGGTCC+TGG | 0.366903 | 4.4:+12750509 | None:intergenic |
| GTGGATGTCTCTTGATCATT+AGG | 0.379350 | 4.4:-12748959 | None:intergenic |
| ATCTGCCAATTCAATTTATG+AGG | 0.388056 | 4.4:-12750558 | MS.gene47863:CDS |
| ATAAGTTCCTCGTTCCAAAC+TGG | 0.391227 | 4.4:+12749596 | None:intergenic |
| AAAAGCCTCATAAATTGAAT+TGG | 0.395677 | 4.4:+12750553 | None:intergenic |
| CTGTTCAGACGACTGTAATA+AGG | 0.399690 | 4.4:-12749631 | MS.gene47863:CDS |
| TTGTATGCTTAAAATGTTGT+GGG | 0.417828 | 4.4:-12751357 | MS.gene47863:CDS |
| TACAGGTAAAAGAAGATTGA+AGG | 0.424972 | 4.4:-12751670 | MS.gene47863:intron |
| TTCTCAGCTGATGATATAAT+GGG | 0.433820 | 4.4:-12749198 | MS.gene47863:CDS |
| CCAAGCTTCAGAACAACATA+TGG | 0.438909 | 4.4:+12749789 | None:intergenic |
| TGTTCTGAAGCTTGGCCAAC+AGG | 0.440062 | 4.4:-12749781 | MS.gene47863:intron |
| TGTCTGTAACATTGGATGAA+TGG | 0.468188 | 4.4:-12750625 | MS.gene47863:CDS |
| CGTTCTTCATGACTGGCGTC+TGG | 0.471968 | 4.4:+12750503 | None:intergenic |
| TAATGACAATGCGCTTATAG+AGG | 0.485544 | 4.4:-12749076 | MS.gene47863:CDS |
| AAACATAACATACTTGATAC+AGG | 0.485779 | 4.4:+12752181 | None:intergenic |
| ATAGATGCAATGATGGAAGT+TGG | 0.488889 | 4.4:-12750590 | MS.gene47863:CDS |
| CCATATGTTGTTCTGAAGCT+TGG | 0.490331 | 4.4:-12749789 | MS.gene47863:CDS |
| TTGTGCTGATTGTAGTGCTC+CGG | 0.495186 | 4.4:-12751619 | MS.gene47863:CDS |
| ATGTTTGATGATATGCGAAT+AGG | 0.495475 | 4.4:-12749114 | MS.gene47863:CDS |
| AAGAACGTGCAAAATTCATC+AGG | 0.500258 | 4.4:-12750487 | MS.gene47863:intron |
| TAGTGCTCCGGATCCTAAAT+GGG | 0.500733 | 4.4:-12751607 | MS.gene47863:CDS |
| ACCTTTAATAAATTCTGCAA+TGG | 0.502560 | 4.4:-12749154 | MS.gene47863:CDS |
| ACTTACGCCCATTTAGGATC+CGG | 0.503153 | 4.4:+12751600 | None:intergenic |
| AGTCAATATCATTGACGGTA+AGG | 0.516186 | 4.4:-12749046 | MS.gene47863:CDS |
| AGCATAGTCAATATCATTGA+CGG | 0.523994 | 4.4:-12749051 | MS.gene47863:CDS |
| TGATGAAATAGATGCAATGA+TGG | 0.538280 | 4.4:-12750597 | MS.gene47863:CDS |
| ATGATGAAAATAGGAAGGAA+TGG | 0.540721 | 4.4:-12749889 | MS.gene47863:intron |
| AATTAAACTTAGAACTTGAG+TGG | 0.550387 | 4.4:-12748978 | MS.gene47863:CDS |
| GTCGATGAACAATAGACGGT+TGG | 0.555087 | 4.4:-12752215 | MS.gene47863:CDS |
| TTTGTATGCTTAAAATGTTG+TGG | 0.556153 | 4.4:-12751358 | MS.gene47863:CDS |
| TGTGGGGTGCACAGAAGTCT+TGG | 0.558109 | 4.4:-12751340 | MS.gene47863:CDS |
| ATTTAGCAATCAGAGATATG+AGG | 0.559392 | 4.4:-12749821 | MS.gene47863:CDS |
| CCGGAAGGATATACAAAACC+AGG | 0.574677 | 4.4:-12750527 | MS.gene47863:CDS |
| TGGTCCAAATTGCTGAGGAA+CGG | 0.581432 | 4.4:+12749568 | None:intergenic |
| GATAGCTTTCGAAAATCTAG+TGG | 0.590041 | 4.4:-12750091 | MS.gene47863:CDS |
| GATGCAATGATGGAAGTTGG+AGG | 0.591464 | 4.4:-12750587 | MS.gene47863:CDS |
| TGGAATGCTGAAAGTGAAAG+TGG | 0.593242 | 4.4:-12749856 | MS.gene47863:CDS |
| CTGAAAGTGAAAGTGGTCAA+AGG | 0.594303 | 4.4:-12749849 | MS.gene47863:CDS |
| GGATGTCGATGAACAATAGA+CGG | 0.602168 | 4.4:-12752219 | MS.gene47863:CDS |
| TCTTGGCACTCATATATCAA+AGG | 0.604306 | 4.4:-12751323 | MS.gene47863:intron |
| CTTATTGGTCCAAATTGCTG+AGG | 0.607175 | 4.4:+12749563 | None:intergenic |
| TGTATGCTTAAAATGTTGTG+GGG | 0.631760 | 4.4:-12751356 | MS.gene47863:CDS |
| AAGCTCCAGAATGTCGAATG+TGG | 0.636564 | 4.4:-12749003 | MS.gene47863:CDS |
| TTTGAATCCAGTTTGGAACG+AGG | 0.647447 | 4.4:-12749603 | MS.gene47863:CDS |
| ATAGACGGTTGGAATTTGGG+AGG | 0.688403 | 4.4:-12752204 | MS.gene47863:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATATTATTACCGTA+TGG | - | chr4.4:12750152-12750171 | MS.gene47863:CDS | 15.0% |
| !! | CAAATTACATATTTAAAAAC+AGG | - | chr4.4:12749371-12749390 | MS.gene47863:intron | 15.0% |
| !! | GATATAATCCATTAAAATTT+AGG | + | chr4.4:12749154-12749173 | None:intergenic | 15.0% |
| !! | TGAAATAATTGAAAAACTAA+CGG | - | chr4.4:12749946-12749965 | MS.gene47863:intron | 15.0% |
| !!! | AAGGATGTTATTTTATATTT+GGG | - | chr4.4:12750114-12750133 | MS.gene47863:CDS | 15.0% |
| !!! | TATATATCGAATTTTGATAA+GGG | + | chr4.4:12749059-12749078 | None:intergenic | 15.0% |
| !! | AAACTACATAAATTGTTTAC+AGG | + | chr4.4:12751714-12751733 | None:intergenic | 20.0% |
| !! | AATTTCATTTCATTAACTGA+TGG | + | chr4.4:12751228-12751247 | None:intergenic | 20.0% |
| !! | ATTAAAATGTCACTCTTAAA+TGG | + | chr4.4:12750952-12750971 | None:intergenic | 20.0% |
| !! | GAAATAATTGAAAAACTAAC+GGG | - | chr4.4:12749947-12749966 | MS.gene47863:intron | 20.0% |
| !! | TAAAAAAATTAGTAGGACAA+TGG | + | chr4.4:12750365-12750384 | None:intergenic | 20.0% |
| !! | TTTCAATTATTTCAAGACAA+GGG | + | chr4.4:12749940-12749959 | None:intergenic | 20.0% |
| !!! | ATGATATTGATGATGAAAAT+AGG | - | chr4.4:12751279-12751298 | MS.gene47863:intron | 20.0% |
| !!! | ATGTATTGTTTTAGGTATAT+TGG | + | chr4.4:12751778-12751797 | None:intergenic | 20.0% |
| !!! | ATTACATCATGTATTGTTTT+AGG | + | chr4.4:12751786-12751805 | None:intergenic | 20.0% |
| !!! | CTTTCTTTTTAAATTGACAA+TGG | - | chr4.4:12751507-12751526 | MS.gene47863:intron | 20.0% |
| !!! | GAAGGATGTTATTTTATATT+TGG | - | chr4.4:12750113-12750132 | MS.gene47863:CDS | 20.0% |
| !!! | GTATATATCGAATTTTGATA+AGG | + | chr4.4:12749060-12749079 | None:intergenic | 20.0% |
| !!! | TAATTTAAAAAAGAGTGTGT+TGG | + | chr4.4:12749117-12749136 | None:intergenic | 20.0% |
| !!! | TATAGTATGTATGTTTTTCA+AGG | - | chr4.4:12749259-12749278 | MS.gene47863:intron | 20.0% |
| !!! | TTTTCAATTATTTCAAGACA+AGG | + | chr4.4:12749941-12749960 | None:intergenic | 20.0% |
| ! | AAAAGCCTCATAAATTGAAT+TGG | + | chr4.4:12750627-12750646 | None:intergenic | 25.0% |
| ! | AAACATAACATACTTGATAC+AGG | + | chr4.4:12748999-12749018 | None:intergenic | 25.0% |
| ! | AAGAAGATTGAAGGATTTAT+TGG | - | chr4.4:12749516-12749535 | MS.gene47863:intron | 25.0% |
| ! | AAGGAAAAACTAAACCAAAA+TGG | + | chr4.4:12749460-12749479 | None:intergenic | 25.0% |
| ! | AAGTTTCTCCAAAAAGATTA+TGG | - | chr4.4:12751064-12751083 | MS.gene47863:intron | 25.0% |
| ! | AATAAACAAAAAAGGTTGTG+TGG | + | chr4.4:12749615-12749634 | None:intergenic | 25.0% |
| ! | AATCCATTAAAATTTAGGAG+AGG | + | chr4.4:12749149-12749168 | None:intergenic | 25.0% |
| ! | AATTAAACTTAGAACTTGAG+TGG | - | chr4.4:12752199-12752218 | MS.gene47863:CDS | 25.0% |
| ! | ACACAAATACATTCAATCAA+AGG | + | chr4.4:12751141-12751160 | None:intergenic | 25.0% |
| ! | ACCTTTAATAAATTCTGCAA+TGG | - | chr4.4:12752023-12752042 | MS.gene47863:intron | 25.0% |
| ! | AGAGTTGCAAAACAATAATT+TGG | + | chr4.4:12750809-12750828 | None:intergenic | 25.0% |
| ! | ATACATACAAATGTGTATGT+GGG | - | chr4.4:12749989-12750008 | MS.gene47863:intron | 25.0% |
| ! | ATATACATTACAAATGTGAC+AGG | + | chr4.4:12749734-12749753 | None:intergenic | 25.0% |
| ! | GAGTTGCAAAACAATAATTT+GGG | + | chr4.4:12750808-12750827 | None:intergenic | 25.0% |
| ! | TTCATATACAAGACATTGTA+AGG | + | chr4.4:12751897-12751916 | None:intergenic | 25.0% |
| ! | TTCTTACTATGAATAGATTG+AGG | - | chr4.4:12750428-12750447 | MS.gene47863:intron | 25.0% |
| ! | TTGTATGCTTAAAATGTTGT+GGG | - | chr4.4:12749820-12749839 | MS.gene47863:CDS | 25.0% |
| ! | TTTCAATGGCATATACTATT+AGG | - | chr4.4:12751427-12751446 | MS.gene47863:intron | 25.0% |
| ! | TTTGTATGCTTAAAATGTTG+TGG | - | chr4.4:12749819-12749838 | MS.gene47863:CDS | 25.0% |
| !! | AAAGCTATCCATAATCTTTT+TGG | + | chr4.4:12751075-12751094 | None:intergenic | 25.0% |
| !! | AACTGATGGTGTAATAAAAT+TGG | + | chr4.4:12751214-12751233 | None:intergenic | 25.0% |
| !! | AATTTATGAGGCTTTTATTC+CGG | - | chr4.4:12750631-12750650 | MS.gene47863:CDS | 25.0% |
| !! | GTTTTCATGAGTGATTTTAA+TGG | - | chr4.4:12751248-12751267 | MS.gene47863:intron | 25.0% |
| !! | TATCCTCTCCTAAATTTTAA+TGG | - | chr4.4:12749143-12749162 | MS.gene47863:CDS | 25.0% |
| !!! | ACCTTTTTTGTTTATTGTCA+TGG | - | chr4.4:12749619-12749638 | MS.gene47863:CDS | 25.0% |
| !!! | ATTGCACTTTGAAATTCAAA+AGG | - | chr4.4:12750403-12750422 | MS.gene47863:intron | 25.0% |
| !!! | GTCCTACTAATTTTTTTAGA+CGG | - | chr4.4:12750367-12750386 | MS.gene47863:intron | 25.0% |
| !!! | TACAAATTGTGTTGGTTATA+TGG | - | chr4.4:12749302-12749321 | MS.gene47863:intron | 25.0% |
| !!! | TATTGATGATGAAAATAGGA+AGG | - | chr4.4:12751283-12751302 | MS.gene47863:intron | 25.0% |
| !!! | TCCTACTAATTTTTTTAGAC+GGG | - | chr4.4:12750368-12750387 | MS.gene47863:intron | 25.0% |
| AACAACCAACCATTCTTATA+TGG | - | chr4.4:12750070-12750089 | MS.gene47863:intron | 30.0% | |
| ACAAAATCTGACAAGGAAAA+AGG | + | chr4.4:12750535-12750554 | None:intergenic | 30.0% | |
| AGCATAGTCAATATCATTGA+CGG | - | chr4.4:12752126-12752145 | MS.gene47863:intron | 30.0% | |
| AGTGCTAAACTTAATGATCT+AGG | - | chr4.4:12750254-12750273 | MS.gene47863:intron | 30.0% | |
| ATAAATTCTGCAATGGCATT+TGG | - | chr4.4:12752030-12752049 | MS.gene47863:intron | 30.0% | |
| ATCTAGTGGTTCAAAGAATA+TGG | - | chr4.4:12751100-12751119 | MS.gene47863:intron | 30.0% | |
| ATCTGCCAATTCAATTTATG+AGG | - | chr4.4:12750619-12750638 | MS.gene47863:CDS | 30.0% | |
| ATGATATGCGAATAGGAAAA+TGG | - | chr4.4:12752070-12752089 | MS.gene47863:intron | 30.0% | |
| ATGATGAAAATAGGAAGGAA+TGG | - | chr4.4:12751288-12751307 | MS.gene47863:intron | 30.0% | |
| ATGTTGACATTTATGATTGC+AGG | - | chr4.4:12750970-12750989 | MS.gene47863:intron | 30.0% | |
| ATTTAGCAATCAGAGATATG+AGG | - | chr4.4:12751356-12751375 | MS.gene47863:CDS | 30.0% | |
| CAAGCATATCCATATAAGAA+TGG | + | chr4.4:12750082-12750101 | None:intergenic | 30.0% | |
| CAGTATGCTAATTCAACTTA+TGG | + | chr4.4:12751167-12751186 | None:intergenic | 30.0% | |
| CATACATACAAATGTGTATG+TGG | - | chr4.4:12749988-12750007 | MS.gene47863:intron | 30.0% | |
| CATATCCATATAAGAATGGT+TGG | + | chr4.4:12750078-12750097 | None:intergenic | 30.0% | |
| GAAGGAATGGTAGAATTTAT+TGG | - | chr4.4:12751301-12751320 | MS.gene47863:intron | 30.0% | |
| GAGGATAAATTAGTAGTATG+TGG | + | chr4.4:12750321-12750340 | None:intergenic | 30.0% | |
| GATATACATGAATAGAATCG+AGG | - | chr4.4:12750476-12750495 | MS.gene47863:intron | 30.0% | |
| GCCATGACAATAAACAAAAA+AGG | + | chr4.4:12749623-12749642 | None:intergenic | 30.0% | |
| GCCATTGCAGAATTTATTAA+AGG | + | chr4.4:12752027-12752046 | None:intergenic | 30.0% | |
| GTGCTAAACTTAATGATCTA+GGG | - | chr4.4:12750255-12750274 | MS.gene47863:intron | 30.0% | |
| TAATAATAGTCCATTGTGCT+TGG | - | chr4.4:12750848-12750867 | MS.gene47863:intron | 30.0% | |
| TAATTTATCCTCCATTCCAT+TGG | - | chr4.4:12750329-12750348 | MS.gene47863:intron | 30.0% | |
| TACAGGTAAAAGAAGATTGA+AGG | - | chr4.4:12749507-12749526 | MS.gene47863:intron | 30.0% | |
| TCCCGTCTAAAAAAATTAGT+AGG | + | chr4.4:12750372-12750391 | None:intergenic | 30.0% | |
| TGATGAAATAGATGCAATGA+TGG | - | chr4.4:12750580-12750599 | MS.gene47863:CDS | 30.0% | |
| TGTAACCTTACCAAACTTAT+TGG | + | chr4.4:12751632-12751651 | None:intergenic | 30.0% | |
| TGTATGCTTAAAATGTTGTG+GGG | - | chr4.4:12749821-12749840 | MS.gene47863:CDS | 30.0% | |
| TGTTGATGTACAAATTGTGT+TGG | - | chr4.4:12749294-12749313 | MS.gene47863:intron | 30.0% | |
| TTCTCAGCTGATGATATAAT+GGG | - | chr4.4:12751979-12751998 | MS.gene47863:intron | 30.0% | |
| ! | AAATGGAACGTTGATTGAAT+TGG | + | chr4.4:12750935-12750954 | None:intergenic | 30.0% |
| ! | ACTTTTTGTCACTGAAAAGT+AGG | - | chr4.4:12750749-12750768 | MS.gene47863:intron | 30.0% |
| ! | ATGTTTGATGATATGCGAAT+AGG | - | chr4.4:12752063-12752082 | MS.gene47863:intron | 30.0% |
| ! | GGAACTAGATTTTGCATTAT+AGG | + | chr4.4:12751693-12751712 | None:intergenic | 30.0% |
| ! | GTTGGTTATATGGTTTGTAT+CGG | - | chr4.4:12749312-12749331 | MS.gene47863:intron | 30.0% |
| ! | TCAGATTTTGTCTGTAACAT+TGG | - | chr4.4:12750544-12750563 | MS.gene47863:CDS | 30.0% |
| ! | TTAATGATCTAGGGTATAAG+AGG | - | chr4.4:12750264-12750283 | MS.gene47863:intron | 30.0% |
| ! | TTTAAAAAAGAGTGTGTTGG+TGG | + | chr4.4:12749114-12749133 | None:intergenic | 30.0% |
| !! | ACAAATGTCTTTGAAGTACT+TGG | - | chr4.4:12749198-12749217 | MS.gene47863:CDS | 30.0% |
| !! | GTATCGGTTAAAATCTTTGT+CGG | - | chr4.4:12749328-12749347 | MS.gene47863:intron | 30.0% |
| !!! | GTCGGAAATAATTTTTTCGA+AGG | - | chr4.4:12749346-12749365 | MS.gene47863:intron | 30.0% |
| !!! | TTTTTTTGAACTGCTTCTTC+AGG | - | chr4.4:12749778-12749797 | MS.gene47863:intron | 30.0% |
| AAACAGGCATGAACGATTTA+AGG | - | chr4.4:12749387-12749406 | MS.gene47863:intron | 35.0% | |
| AACAATAGACGGTTGGAATT+TGG | - | chr4.4:12748969-12748988 | MS.gene47863:CDS | 35.0% | |
| AACATGCTTCATTGTATTGC+AGG | - | chr4.4:12751936-12751955 | MS.gene47863:intron | 35.0% | |
| AAGAACGTGCAAAATTCATC+AGG | - | chr4.4:12750690-12750709 | MS.gene47863:intron | 35.0% | |
| ACAATAGACGGTTGGAATTT+GGG | - | chr4.4:12748970-12748989 | MS.gene47863:CDS | 35.0% | |
| ACCAATCATTCAACTTCTCA+AGG | + | chr4.4:12749479-12749498 | None:intergenic | 35.0% | |
| AGTCAATATCATTGACGGTA+AGG | - | chr4.4:12752131-12752150 | MS.gene47863:intron | 35.0% | |
| ATGCTTGTGCAATAGTTTGA+AGG | - | chr4.4:12750095-12750114 | MS.gene47863:CDS | 35.0% | |
| ATTGAAAACAACCAACCTGT+TGG | + | chr4.4:12751414-12751433 | None:intergenic | 35.0% | |
| CAATGGTTAGTGATTACCAA+TGG | + | chr4.4:12750348-12750367 | None:intergenic | 35.0% | |
| GAATAAACTTACGCCCATTT+AGG | + | chr4.4:12749586-12749605 | None:intergenic | 35.0% | |
| GATAGCTTTCGAAAATCTAG+TGG | - | chr4.4:12751086-12751105 | MS.gene47863:intron | 35.0% | |
| GCAATTTGGACCAATAAGTT+TGG | - | chr4.4:12751619-12751638 | MS.gene47863:CDS | 35.0% | |
| GCTGAAGACAAAAATTCATC+TGG | + | chr4.4:12750786-12750805 | None:intergenic | 35.0% | |
| GGAGTAATTTGAATCCAGTT+TGG | - | chr4.4:12751567-12751586 | MS.gene47863:intron | 35.0% | |
| GTTACAGACAAAATCTGACA+AGG | + | chr4.4:12750542-12750561 | None:intergenic | 35.0% | |
| GTTAGTGATTACCAATGGAA+TGG | + | chr4.4:12750343-12750362 | None:intergenic | 35.0% | |
| GTTCATGGTAGCATAAAAAG+TGG | - | chr4.4:12750907-12750926 | MS.gene47863:intron | 35.0% | |
| GTTCTCAGCTGATGATATAA+TGG | - | chr4.4:12751978-12751997 | MS.gene47863:intron | 35.0% | |
| TAATGACAATGCGCTTATAG+AGG | - | chr4.4:12752101-12752120 | MS.gene47863:intron | 35.0% | |
| TACAAATGTGACAGGTTTCT+TGG | + | chr4.4:12749726-12749745 | None:intergenic | 35.0% | |
| TCCTTGAGAAGTTGAATGAT+TGG | - | chr4.4:12749475-12749494 | MS.gene47863:intron | 35.0% | |
| TCTTGGCACTCATATATCAA+AGG | - | chr4.4:12749854-12749873 | MS.gene47863:CDS | 35.0% | |
| TGAGAAGTTGAATGATTGGT+AGG | - | chr4.4:12749479-12749498 | MS.gene47863:intron | 35.0% | |
| TGTCTGTAACATTGGATGAA+TGG | - | chr4.4:12750552-12750571 | MS.gene47863:CDS | 35.0% | |
| TTAGAGCAACATTACGTATG+AGG | - | chr4.4:12751851-12751870 | MS.gene47863:intron | 35.0% | |
| TTCTTCAGGTCAGCAAATAT+TGG | - | chr4.4:12749792-12749811 | MS.gene47863:CDS | 35.0% | |
| TTGGACCAATAAGTTTGGTA+AGG | - | chr4.4:12751624-12751643 | MS.gene47863:CDS | 35.0% | |
| ! | ATAGATGCAATGATGGAAGT+TGG | - | chr4.4:12750587-12750606 | MS.gene47863:CDS | 35.0% |
| ! | ATGATTGGTAGGTCTTTTAC+AGG | - | chr4.4:12749490-12749509 | MS.gene47863:intron | 35.0% |
| ! | TGTGACATGAAAAGCCATTT+TGG | - | chr4.4:12749443-12749462 | MS.gene47863:intron | 35.0% |
| !! | TCATGGCCTTTCTAAAACTA+AGG | - | chr4.4:12749636-12749655 | MS.gene47863:intron | 35.0% |
| !!! | AACAGGTTGGTTGTTTTCAA+TGG | - | chr4.4:12751413-12751432 | MS.gene47863:intron | 35.0% |
| !!! | CTCAGACCTTAGTTTTAGAA+AGG | + | chr4.4:12749645-12749664 | None:intergenic | 35.0% |
| AGTGATTACCAATGGAATGG+AGG | + | chr4.4:12750340-12750359 | None:intergenic | 40.0% | |
| ATAAGTTCCTCGTTCCAAAC+TGG | + | chr4.4:12751584-12751603 | None:intergenic | 40.0% | |
| ATGCTTCATTGTATTGCAGG+AGG | - | chr4.4:12751939-12751958 | MS.gene47863:intron | 40.0% | |
| ATTCTCCACATTCGACATTC+TGG | + | chr4.4:12752182-12752201 | None:intergenic | 40.0% | |
| CAACATTACGTATGAGGAGA+TGG | - | chr4.4:12751857-12751876 | MS.gene47863:intron | 40.0% | |
| CAATGCTTAACCAAGCACAA+TGG | + | chr4.4:12750861-12750880 | None:intergenic | 40.0% | |
| CATACAAATGTGTATGTGGG+TGG | - | chr4.4:12749992-12750011 | MS.gene47863:intron | 40.0% | |
| CCAAGCTTCAGAACAACATA+TGG | + | chr4.4:12751391-12751410 | None:intergenic | 40.0% | |
| CTGAAAGTGAAAGTGGTCAA+AGG | - | chr4.4:12751328-12751347 | MS.gene47863:CDS | 40.0% | |
| CTGTTCAGACGACTGTAATA+AGG | - | chr4.4:12751546-12751565 | MS.gene47863:intron | 40.0% | |
| CTTATTGGTCCAAATTGCTG+AGG | + | chr4.4:12751617-12751636 | None:intergenic | 40.0% | |
| TGGAATGCTGAAAGTGAAAG+TGG | - | chr4.4:12751321-12751340 | MS.gene47863:intron | 40.0% | |
| ! | ATGATCTAGGGTATAAGAGG+TGG | - | chr4.4:12750267-12750286 | MS.gene47863:intron | 40.0% |
| ! | ATGGCTTTTCATGTCACAAG+TGG | + | chr4.4:12749441-12749460 | None:intergenic | 40.0% |
| ! | TATGAGGCTTTTATTCCGGA+AGG | - | chr4.4:12750635-12750654 | MS.gene47863:intron | 40.0% |
| ! | TTTGAATCCAGTTTGGAACG+AGG | - | chr4.4:12751574-12751593 | MS.gene47863:intron | 40.0% |
| ! | TTTTGCACGTTCTTCATGAC+TGG | + | chr4.4:12750684-12750703 | None:intergenic | 40.0% |
| !! | CCATATGTTGTTCTGAAGCT+TGG | - | chr4.4:12751388-12751407 | MS.gene47863:intron | 40.0% |
| !!! | CCTGGTTTTGTATATCCTTC+CGG | + | chr4.4:12750653-12750672 | None:intergenic | 40.0% |
| AAGCTCCAGAATGTCGAATG+TGG | - | chr4.4:12752174-12752193 | MS.gene47863:intron | 45.0% | |
| ATAGACGGTTGGAATTTGGG+AGG | - | chr4.4:12748973-12748992 | MS.gene47863:CDS | 45.0% | |
| CCGCAATCATGTATGCCATA+CGG | + | chr4.4:12750170-12750189 | None:intergenic | 45.0% | |
| CCGGAAGGATATACAAAACC+AGG | - | chr4.4:12750650-12750669 | MS.gene47863:intron | 45.0% | |
| CCGTATGGCATACATGATTG+CGG | - | chr4.4:12750167-12750186 | MS.gene47863:CDS | 45.0% | |
| CGACATTGCGATGTTGTTCA+TGG | - | chr4.4:12750892-12750911 | MS.gene47863:intron | 45.0% | |
| GCAATGGCATTTGGAGATAC+TGG | - | chr4.4:12752039-12752058 | MS.gene47863:intron | 45.0% | |
| GTCGATGAACAATAGACGGT+TGG | - | chr4.4:12748962-12748981 | MS.gene47863:CDS | 45.0% | |
| TAGTGCTCCGGATCCTAAAT+GGG | - | chr4.4:12749570-12749589 | MS.gene47863:CDS | 45.0% | |
| TGGTCCAAATTGCTGAGGAA+CGG | + | chr4.4:12751612-12751631 | None:intergenic | 45.0% | |
| TTGTCCGTTCCTCAGCAATT+TGG | - | chr4.4:12751605-12751624 | MS.gene47863:intron | 45.0% | |
| ! | ACTTACGCCCATTTAGGATC+CGG | + | chr4.4:12749580-12749599 | None:intergenic | 45.0% |
| ! | GATGCAATGATGGAAGTTGG+AGG | - | chr4.4:12750590-12750609 | MS.gene47863:CDS | 45.0% |
| !! | TTGTGCTGATTGTAGTGCTC+CGG | - | chr4.4:12749558-12749577 | MS.gene47863:intron | 45.0% |
| GTAGTGCTCCGGATCCTAAA+TGG | - | chr4.4:12749569-12749588 | MS.gene47863:CDS | 50.0% | |
| !! | TGTTCTGAAGCTTGGCCAAC+AGG | - | chr4.4:12751396-12751415 | MS.gene47863:intron | 50.0% |
| CGTTCTTCATGACTGGCGTC+TGG | + | chr4.4:12750677-12750696 | None:intergenic | 55.0% | |
| CTGAAGCTTGGCCAACAGGT+TGG | - | chr4.4:12751400-12751419 | MS.gene47863:intron | 55.0% | |
| TGTGGGGTGCACAGAAGTCT+TGG | - | chr4.4:12749837-12749856 | MS.gene47863:CDS | 55.0% | |
| TCATGACTGGCGTCTGGTCC+TGG | + | chr4.4:12750671-12750690 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 12748960 | 12752239 | 12748960 | ID=MS.gene47863 |
| chr4.4 | mRNA | 12748960 | 12752239 | 12748960 | ID=MS.gene47863.t1;Parent=MS.gene47863 |
| chr4.4 | exon | 12752194 | 12752239 | 12752194 | ID=MS.gene47863.t1.exon1;Parent=MS.gene47863.t1 |
| chr4.4 | CDS | 12752194 | 12752239 | 12752194 | ID=cds.MS.gene47863.t1;Parent=MS.gene47863.t1 |
| chr4.4 | exon | 12751606 | 12751687 | 12751606 | ID=MS.gene47863.t1.exon2;Parent=MS.gene47863.t1 |
| chr4.4 | CDS | 12751606 | 12751687 | 12751606 | ID=cds.MS.gene47863.t1;Parent=MS.gene47863.t1 |
| chr4.4 | exon | 12751324 | 12751399 | 12751324 | ID=MS.gene47863.t1.exon3;Parent=MS.gene47863.t1 |
| chr4.4 | CDS | 12751324 | 12751399 | 12751324 | ID=cds.MS.gene47863.t1;Parent=MS.gene47863.t1 |
| chr4.4 | exon | 12750488 | 12750651 | 12750488 | ID=MS.gene47863.t1.exon4;Parent=MS.gene47863.t1 |
| chr4.4 | CDS | 12750488 | 12750651 | 12750488 | ID=cds.MS.gene47863.t1;Parent=MS.gene47863.t1 |
| chr4.4 | exon | 12750078 | 12750207 | 12750078 | ID=MS.gene47863.t1.exon5;Parent=MS.gene47863.t1 |
| chr4.4 | CDS | 12750078 | 12750207 | 12750078 | ID=cds.MS.gene47863.t1;Parent=MS.gene47863.t1 |
| chr4.4 | exon | 12749782 | 12749898 | 12749782 | ID=MS.gene47863.t1.exon6;Parent=MS.gene47863.t1 |
| chr4.4 | CDS | 12749782 | 12749898 | 12749782 | ID=cds.MS.gene47863.t1;Parent=MS.gene47863.t1 |
| chr4.4 | exon | 12749559 | 12749654 | 12749559 | ID=MS.gene47863.t1.exon7;Parent=MS.gene47863.t1 |
| chr4.4 | CDS | 12749559 | 12749654 | 12749559 | ID=cds.MS.gene47863.t1;Parent=MS.gene47863.t1 |
| chr4.4 | exon | 12748960 | 12749241 | 12748960 | ID=MS.gene47863.t1.exon8;Parent=MS.gene47863.t1 |
| chr4.4 | CDS | 12748960 | 12749241 | 12748960 | ID=cds.MS.gene47863.t1;Parent=MS.gene47863.t1 |
| Gene Sequence |
| Protein sequence |
