AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017959

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017959.t1 MTR_7g092770 99.613 775 3 0 1 775 1 775 0.0 1606
MS.gene017959.t1 MTR_0305s0020 93.428 776 48 3 1 775 1 774 0.0 1498
MS.gene017959.t1 MTR_4g066150 81.982 777 131 7 1 775 1 770 0.0 1315
MS.gene017959.t1 MTR_3g027150 68.734 790 225 7 7 775 34 822 0.0 1165
MS.gene017959.t1 MTR_4g023460 69.289 788 220 8 7 775 358 1142 0.0 1155
MS.gene017959.t1 MTR_5g010390 69.063 779 228 6 6 775 233 1007 0.0 1151
MS.gene017959.t1 MTR_0291s0010 67.215 790 241 6 3 775 9 797 0.0 1145
MS.gene017959.t1 MTR_4g033215 65.290 775 256 8 8 775 276 1044 0.0 1063
MS.gene017959.t1 MTR_8g031270 60.307 781 291 8 6 775 231 1003 0.0 997
MS.gene017959.t1 MTR_7g076900 59.696 789 287 10 8 775 235 1013 0.0 972
MS.gene017959.t1 MTR_4g057675 58.270 786 304 10 2 775 10 783 0.0 890
MS.gene017959.t1 MTR_4g071870 56.234 786 286 12 2 775 10 749 0.0 856
MS.gene017959.t1 MTR_4g107850 52.964 776 319 14 19 775 290 1038 0.0 808
MS.gene017959.t1 MTR_6g027540 51.175 766 325 13 30 775 273 1009 0.0 775
MS.gene017959.t1 MTR_6g028050 48.105 765 357 13 29 775 284 1026 0.0 738
MS.gene017959.t1 MTR_1g015540 48.528 781 369 13 12 775 9 773 0.0 696
MS.gene017959.t1 MTR_5g096980 42.125 781 415 13 8 775 7 763 0.0 603
MS.gene017959.t1 MTR_4g023250 66.923 130 41 1 645 774 1 128 3.76e-54 183
MS.gene017959.t1 MTR_4g023230 49.180 122 47 1 562 683 49 155 6.30e-32 122
MS.gene017959.t1 MTR_4g023390 50.000 104 30 1 648 751 16 97 2.32e-25 101
MS.gene017959.t1 MTR_7g052280 67.089 79 2 2 247 325 1 55 9.12e-25 98.2
MS.gene017959.t1 MTR_4g023240 66.667 60 20 0 496 555 10 69 9.51e-21 87.0
MS.gene017959.t1 MTR_2g027360 31.783 129 75 4 40 161 3 125 5.12e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017959.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene017959.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene017959.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene017959.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene017959.t1 AT1G51570 88.288 777 88 3 1 775 1 776 0.0 1437
MS.gene017959.t1 AT5G12970 81.105 778 135 7 1 775 1 769 0.0 1305
MS.gene017959.t1 AT5G06850 67.090 787 238 7 7 775 11 794 0.0 1150
MS.gene017959.t1 AT4G11610 68.205 780 232 7 6 775 238 1011 0.0 1140
MS.gene017959.t1 AT4G11610 68.205 780 232 7 6 775 234 1007 0.0 1140
MS.gene017959.t1 AT4G11610 68.205 780 232 7 6 775 101 874 0.0 1138
MS.gene017959.t1 AT5G48060 66.624 779 249 7 7 775 259 1036 0.0 1118
MS.gene017959.t1 AT1G22610 65.613 791 250 9 1 775 245 1029 0.0 1080
MS.gene017959.t1 AT4G00700 59.515 783 301 6 6 775 227 1006 0.0 978
MS.gene017959.t1 AT4G00700 59.515 783 301 6 6 775 227 1006 0.0 978
MS.gene017959.t1 AT3G61300 58.922 779 290 13 4 775 217 972 0.0 945
MS.gene017959.t1 AT4G20080 57.827 773 307 10 9 775 15 774 0.0 927
MS.gene017959.t1 AT1G04150 57.828 792 290 13 8 775 241 1012 0.0 925
MS.gene017959.t1 AT1G74720 52.441 799 341 13 2 775 297 1081 0.0 823
MS.gene017959.t1 AT3G03680 52.529 771 313 18 31 775 274 1017 0.0 780
MS.gene017959.t1 AT5G17980 49.141 757 354 12 29 775 314 1049 0.0 756
MS.gene017959.t1 AT3G61720 38.923 817 424 24 7 775 6 795 1.43e-168 506
MS.gene017959.t1 AT5G03435 40.874 778 402 24 7 769 6 740 1.49e-167 502
MS.gene017959.t1 AT5G03435 43.426 578 291 16 7 575 6 556 2.49e-141 427
MS.gene017959.t1 AT5G44760 51.372 401 146 11 8 400 5 364 9.11e-123 377
MS.gene017959.t1 AT5G44760 23.664 524 283 14 179 677 20 451 6.67e-20 94.4
MS.gene017959.t1 AT1G03370 27.459 244 160 8 40 280 3 232 5.83e-14 76.3
MS.gene017959.t1 AT1G03370 27.459 244 160 8 40 280 3 232 8.25e-14 76.3

Find 214 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTATGTGAAGGCTATTT+TGG 0.149556 7.1:+14670451 MS.gene017959:CDS
TGAAAAGCATGTTGTTATTA+TGG 0.199124 7.1:+14670703 MS.gene017959:CDS
CTGTGCCACTCAATTTCTTC+AGG 0.239203 7.1:+14672058 MS.gene017959:CDS
TCCAACTGGGGTGAAGAAAA+TGG 0.246387 7.1:+14671222 MS.gene017959:CDS
TCGAGCTGGCTGACTGTTAA+TGG 0.283050 7.1:-14671343 None:intergenic
AAATGCAGTATCTTTATGTT+AGG 0.287072 7.1:+14669892 MS.gene017959:CDS
CTTCTAGTTCTTCATCCAAC+TGG 0.290568 7.1:+14671208 MS.gene017959:CDS
CTCCTAAGCTTTGGTATTTG+AGG 0.293908 7.1:+14670372 MS.gene017959:CDS
CCTAGCAGTTCCTCTTTGTT+AGG 0.294279 7.1:-14670605 None:intergenic
ACAAACTGTTGTCGGGGATT+TGG 0.302220 7.1:+14671855 MS.gene017959:CDS
AGAAGGTGGTTATCATGTTT+TGG 0.311177 7.1:+14670784 MS.gene017959:CDS
TTGGAGTTTGGTACTATAGA+TGG 0.323138 7.1:+14671674 MS.gene017959:CDS
ATGCCGATGAAATCAAATAA+TGG 0.326327 7.1:+14670911 MS.gene017959:CDS
GGGAGCTGATGCTGGCTGTT+TGG 0.327899 7.1:+14670243 MS.gene017959:CDS
TCTTTCAACAGAAAATCTTC+TGG 0.345233 7.1:-14669801 None:intergenic
AACTCTTCATCTAGTTCGTC+AGG 0.348361 7.1:-14671754 None:intergenic
TGCGGCGCCAGAGGACTATC+AGG 0.355118 7.1:-14670179 None:intergenic
GTGGGGATATTGAATGCTTC+GGG 0.361234 7.1:+14670884 MS.gene017959:CDS
CTGATGCTCTTGCAAATATT+AGG 0.364946 7.1:+14670333 MS.gene017959:CDS
GACTGCAGTCTTTGCTCAGC+TGG 0.373358 7.1:+14671893 MS.gene017959:CDS
ATTGTTGGTAAGATAAGTTC+AGG 0.373990 7.1:-14671631 None:intergenic
TTTGAATCTCTTTGTCCTCC+AGG 0.374663 7.1:-14671118 None:intergenic
CAAGTTGTGGCTCTTCTCAC+TGG 0.375373 7.1:+14671991 MS.gene017959:CDS
TCCACAGCTGTTTCGCCGTT+GGG 0.377277 7.1:-14670838 None:intergenic
GCTTACTGTGTAGCAAAGTA+TGG 0.377309 7.1:+14670950 MS.gene017959:CDS
TGAATCAGAACTGTTGTGAT+AGG 0.382320 7.1:-14671580 None:intergenic
TCCTAAGCTTTGGTATTTGA+GGG 0.385923 7.1:+14670373 MS.gene017959:CDS
GAAGGATCGGATTCAGGCTT+CGG 0.396181 7.1:+14670061 MS.gene017959:CDS
GCTGATGCTGGCTGTTTGGA+TGG 0.398155 7.1:+14670247 MS.gene017959:CDS
CACCTTGGTGGTAAGGTCTC+TGG 0.400603 7.1:+14669834 MS.gene017959:CDS
GAAGTCGAGTATTGGAGTTT+TGG 0.405068 7.1:+14670859 MS.gene017959:CDS
CCGTGCACTGTCATTACAAT+TGG 0.408435 7.1:+14671055 MS.gene017959:CDS
AGTGGGGATATTGAATGCTT+CGG 0.413329 7.1:+14670883 MS.gene017959:CDS
TCGGATGCGGCGACGGTTAG+TGG 0.413525 7.1:+14670308 MS.gene017959:CDS
GTCTGATAAGGGAAGATTCC+CGG 0.415295 7.1:+14670427 MS.gene017959:CDS
GAGAAATTCAACTGGCTGTA+AGG 0.416142 7.1:+14671245 MS.gene017959:CDS
TTCCACAGCTGTTTCGCCGT+TGG 0.421819 7.1:-14670839 None:intergenic
GACTAATCCTGAATGGAATC+AGG 0.424124 7.1:+14670025 MS.gene017959:CDS
TTCTAGTTCTTCATCCAACT+GGG 0.424420 7.1:+14671209 MS.gene017959:CDS
CATATGAGGGTCTGTCTAGA+AGG 0.427742 7.1:+14670767 MS.gene017959:CDS
TGCCGATGAAATCAAATAAT+GGG 0.427885 7.1:+14670912 MS.gene017959:CDS
CTACCTGCGAAAGATGTTAC+TGG 0.428150 7.1:+14669933 MS.gene017959:CDS
TCCATGTGAGGTGGGTGCCT+TGG 0.428924 7.1:-14671700 None:intergenic
ACAAACCTGTGAACACTAGA+TGG 0.430517 7.1:+14670672 MS.gene017959:CDS
AGAAGAGCCACAACTTGAAA+TGG 0.431378 7.1:-14671985 None:intergenic
GAATGAGGATTTGATGTTTG+TGG 0.433783 7.1:+14670529 MS.gene017959:CDS
TGCTGAGCCGCCACTGAGAA+AGG 0.435476 7.1:+14671414 MS.gene017959:CDS
AGGAAGAGTGATAAGGTGAG+AGG 0.436722 7.1:+14670221 MS.gene017959:CDS
TGTTATTCCCTTACAGATGA+TGG 0.437429 7.1:+14670634 MS.gene017959:CDS
CTTACCACCAAGGTGGGGTT+TGG 0.439462 7.1:-14669826 None:intergenic
AATGCAGTATCTTTATGTTA+GGG 0.439908 7.1:+14669893 MS.gene017959:CDS
GGACTTGCAACCGTCTGATA+AGG 0.440825 7.1:+14670415 MS.gene017959:CDS
CATTTGCTCAACAAGGTCAT+AGG 0.445253 7.1:-14669874 None:intergenic
CTATCAGGAGGAACCCTCTT+CGG 0.447291 7.1:-14670164 None:intergenic
GGTTTGACCAAATCTGCAAT+TGG 0.447777 7.1:+14671551 MS.gene017959:CDS
GGAGGTAGTGGAATATATGC+TGG 0.448097 7.1:+14671435 MS.gene017959:CDS
CCAAGCTTGACTTCAACATA+AGG 0.450353 7.1:-14669966 None:intergenic
CTCCCATTATTTGATTTCAT+CGG 0.451057 7.1:-14670914 None:intergenic
TTGCAAGCAGGATTCATATG+AGG 0.451536 7.1:+14670753 MS.gene017959:CDS
TGTGACTCCATTTCAAGTTG+TGG 0.455642 7.1:+14671978 MS.gene017959:CDS
TGTATCTATCTCCTAAGCTT+TGG 0.469644 7.1:+14670363 MS.gene017959:CDS
CCAACTGGGGTGAAGAAAAT+GGG 0.470245 7.1:+14671223 MS.gene017959:CDS
GTAGGATACAAACTGTTGTC+GGG 0.474674 7.1:+14671848 MS.gene017959:CDS
TCTCCGGTCCATCATCTGTA+AGG 0.477605 7.1:-14670642 None:intergenic
GGAGGATAGGAAGAGTGATA+AGG 0.478220 7.1:+14670214 MS.gene017959:CDS
CAGGTTTGTGATCGAGTCTC+CGG 0.480206 7.1:-14670658 None:intergenic
AAGCATGTTGTTATTATGGA+AGG 0.483057 7.1:+14670707 MS.gene017959:CDS
TGCCACTCAATTTCTTCAGG+AGG 0.483882 7.1:+14672061 MS.gene017959:CDS
GGATGAATGTAATGCATCTT+GGG 0.484486 7.1:-14671322 None:intergenic
AAAATCAGTGGCTCCTCAAA+CGG 0.484536 7.1:-14670560 None:intergenic
CAGCTGTGGAAGTCGAGTAT+TGG 0.484621 7.1:+14670851 MS.gene017959:CDS
AAGAGGTAAAGGAAAATTGT+TGG 0.485200 7.1:-14671646 None:intergenic
GAAAATGGGAGAAATTCAAC+TGG 0.487642 7.1:+14671237 MS.gene017959:CDS
GGAAGAGTGATAAGGTGAGA+GGG 0.488372 7.1:+14670222 MS.gene017959:CDS
GGTGAGAGGGGAGCTGATGC+TGG 0.489453 7.1:+14670235 MS.gene017959:CDS
CAAACCCCACCTTGGTGGTA+AGG 0.491282 7.1:+14669827 MS.gene017959:CDS
GCATCCGAGTGCCACGCCTC+AGG 0.494760 7.1:-14670293 None:intergenic
GACTTGCAACCGTCTGATAA+GGG 0.495169 7.1:+14670416 MS.gene017959:CDS
TGGATGAATGTAATGCATCT+TGG 0.496196 7.1:-14671323 None:intergenic
GTCGGGGATTTGGCGACTCA+AGG 0.497341 7.1:+14671865 MS.gene017959:CDS
ATCTTTCGCAGGTAGCTCCT+TGG 0.498641 7.1:-14669925 None:intergenic
TAGCAAAGTATGGACAGAAA+TGG 0.499639 7.1:+14670960 MS.gene017959:CDS
CTCAGCACGGCTAAGTCTCA+TGG 0.501223 7.1:-14671398 None:intergenic
GGCGCCGCAGTGGTATAGAT+TGG 0.501455 7.1:+14670193 MS.gene017959:CDS
AACAGAAAATCTTCTGGAGG+AGG 0.502805 7.1:-14669795 None:intergenic
AGAAGAAGACTAATCCTGAA+TGG 0.504293 7.1:+14670018 MS.gene017959:CDS
AAGAAATTGAGTGGCACAGA+AGG 0.506210 7.1:-14672054 None:intergenic
AGCAAAGTATGGACAGAAAT+GGG 0.506383 7.1:+14670961 MS.gene017959:CDS
TGAGGCGTGGCACTCGGATG+CGG 0.507184 7.1:+14670295 MS.gene017959:CDS
TATGGAAGGGGACAAGAAGA+AGG 0.509014 7.1:+14670721 MS.gene017959:CDS
ATAGCCTTCACATAAACCTC+CGG 0.509665 7.1:-14670446 None:intergenic
GAAGAGTGATAAGGTGAGAG+GGG 0.511445 7.1:+14670223 MS.gene017959:CDS
CAAGCTTGACTTCAACATAA+GGG 0.511908 7.1:-14669965 None:intergenic
GTTTCCTGAGGCGTGGCACT+CGG 0.515073 7.1:+14670289 MS.gene017959:CDS
GCATGTTGTTATTATGGAAG+GGG 0.516659 7.1:+14670709 MS.gene017959:CDS
ACCCTCAAATACCAAAGCTT+AGG 0.516986 7.1:-14670374 None:intergenic
GGTTCCTCCTGATAGTCCTC+TGG 0.518825 7.1:+14670172 MS.gene017959:CDS
TAATGCATCTTGGGCAGCAA+TGG 0.519377 7.1:-14671313 None:intergenic
GGTGGAATGAGCAGTATACT+TGG 0.519885 7.1:+14671020 MS.gene017959:CDS
CGGTGCAAAGCTATCGATGA+TGG 0.520044 7.1:-14670996 None:intergenic
CTGATGCTGGCTGTTTGGAT+GGG 0.522554 7.1:+14670248 MS.gene017959:CDS
TGTGGCTGCAGAACCGTTTG+AGG 0.525708 7.1:+14670547 MS.gene017959:CDS
TTGAACCATCTAGTGTTCAC+AGG 0.525843 7.1:-14670677 None:intergenic
ATGAAATCAAATAATGGGAG+GGG 0.526239 7.1:+14670917 MS.gene017959:CDS
CCTTATGTTGAAGTCAAGCT+TGG 0.526765 7.1:+14669966 MS.gene017959:CDS
TTGAGTGGATTAATTGCTGT+TGG 0.528890 7.1:+14671523 MS.gene017959:CDS
GGAAGCTTGTGACGAAACCT+TGG 0.530590 7.1:-14672033 None:intergenic
GCCAAGGCACCCACCTCACA+TGG 0.530781 7.1:+14671699 MS.gene017959:CDS
GATTCAGGCTTCGGTTCTTG+AGG 0.530948 7.1:+14670070 MS.gene017959:CDS
GGTTAATGTGATCGAGGCAC+AGG 0.532299 7.1:+14670394 MS.gene017959:CDS
TTCCCTTACAGATGATGGAC+CGG 0.532408 7.1:+14670639 MS.gene017959:CDS
AGCATGCAATCAGTTCTTGC+AGG 0.532832 7.1:-14672087 None:intergenic
TCTTTATGTTAGGGTTGTGA+AGG 0.534597 7.1:+14669902 MS.gene017959:CDS
GAATCAGAACTGTTGTGATA+GGG 0.535162 7.1:-14671579 None:intergenic
ATCTAGTTCGTCAGGGTGTG+CGG 0.535646 7.1:-14671746 None:intergenic
CACCATGGTGGTGATAAGCC+TGG 0.536704 7.1:+14671100 MS.gene017959:CDS
AGGAAATCAAGTTTGCAAGC+AGG 0.537088 7.1:+14670741 MS.gene017959:CDS
GGTAGGATACAAACTGTTGT+CGG 0.541500 7.1:+14671847 MS.gene017959:CDS
AGCATGTTGTTATTATGGAA+GGG 0.541928 7.1:+14670708 MS.gene017959:CDS
GGACTAGAATCTCTCAGAGC+AGG 0.546735 7.1:+14670489 MS.gene017959:CDS
TTCTCAGTGGCGGCTCAGCA+CGG 0.549574 7.1:-14671411 None:intergenic
GATGCCTCAGACTGTCGAGC+TGG 0.550117 7.1:-14671357 None:intergenic
TCTCAATGAGATTCCGAAGA+GGG 0.552069 7.1:+14670151 MS.gene017959:CDS
AGTGGTATAGATTGGAGGAT+AGG 0.552452 7.1:+14670201 MS.gene017959:CDS
TAGCCTTCACATAAACCTCC+GGG 0.554227 7.1:-14670445 None:intergenic
GCCACTGAGAAAGGAGGTAG+TGG 0.554380 7.1:+14671423 MS.gene017959:CDS
TGCAAGCAGGATTCATATGA+GGG 0.556261 7.1:+14670754 MS.gene017959:CDS
CGCATCCTCACGATGTCAGA+AGG 0.560574 7.1:-14671799 None:intergenic
AGACGTGTGTCCATGTGAGG+TGG 0.561408 7.1:-14671709 None:intergenic
CTGAGAGATTCTAGTCCTCA+AGG 0.563761 7.1:-14670483 None:intergenic
GAGACCAAACCCCACCTTGG+TGG 0.564488 7.1:+14669822 MS.gene017959:CDS
GTGGCACTCGGATGCGGCGA+CGG 0.568143 7.1:+14670301 MS.gene017959:CDS
GATTAATTGCTGTTGGAAAG+TGG 0.569868 7.1:+14671530 MS.gene017959:CDS
CAGTCTCGAGTGTGGAAAGA+CGG 0.571907 7.1:-14671159 None:intergenic
CAGGGTGTGCGGAATCAGCA+TGG 0.574507 7.1:-14671735 None:intergenic
GACAACAGTTTGTATCCTAC+CGG 0.574843 7.1:-14671845 None:intergenic
TGTTAGGGTTGTGAAGGCCA+AGG 0.575221 7.1:+14669908 MS.gene017959:CDS
ATGTCAGAAGGTCTTGTGGT+TGG 0.576119 7.1:-14671787 None:intergenic
ATAGTCCTCTGGCGCCGCAG+TGG 0.576174 7.1:+14670183 MS.gene017959:CDS
ATGAAGAACTAGAAGCGGAT+AGG 0.578613 7.1:-14671200 None:intergenic
TTCAACAGAAAATCTTCTGG+AGG 0.580397 7.1:-14669798 None:intergenic
CTATACCACTGCGGCGCCAG+AGG 0.580494 7.1:-14670188 None:intergenic
CCTAACAAAGAGGAACTGCT+AGG 0.581474 7.1:+14670605 MS.gene017959:CDS
TTCTTCGCATACTCCACATG+TGG 0.584507 7.1:-14671468 None:intergenic
AGAGACCTTACCACCAAGGT+GGG 0.585249 7.1:-14669832 None:intergenic
GGGAATCTTCCCTTATCAGA+CGG 0.587236 7.1:-14670425 None:intergenic
TATCAATCCGATGTGGAATG+AGG 0.587518 7.1:+14670514 MS.gene017959:CDS
CACGATGTCAGAAGGTCTTG+TGG 0.588138 7.1:-14671791 None:intergenic
TTGTTGGTAAGATAAGTTCA+GGG 0.591225 7.1:-14671630 None:intergenic
GCCGCAGTGGTATAGATTGG+AGG 0.592270 7.1:+14670196 MS.gene017959:CDS
GCCCAACGGCGAAACAGCTG+TGG 0.595415 7.1:+14670837 MS.gene017959:CDS
GTCAAGCTTGGTAATTACAA+AGG 0.597001 7.1:+14669978 MS.gene017959:CDS
TGAAATCAAATAATGGGAGG+GGG 0.602820 7.1:+14670918 MS.gene017959:CDS
ATTCCCGGAGGTTTATGTGA+AGG 0.604425 7.1:+14670442 MS.gene017959:CDS
CTTCCAGTAACATCTTTCGC+AGG 0.611302 7.1:-14669936 None:intergenic
AGCTGATGAAGCGTTTCCTG+AGG 0.615613 7.1:+14670277 MS.gene017959:CDS
CAGTAGTGATCTTCGCCCAA+CGG 0.615629 7.1:+14670823 MS.gene017959:CDS
AGGGTGTGCGGAATCAGCAT+GGG 0.615690 7.1:-14671734 None:intergenic
CCAATTGTAATGACAGTGCA+CGG 0.615694 7.1:-14671055 None:intergenic
TCAGCCAGCTCGACAGTCTG+AGG 0.617012 7.1:+14671353 MS.gene017959:CDS
ATGAAGCGTTTCCTGAGGCG+TGG 0.618045 7.1:+14670282 MS.gene017959:CDS
GACTCGATCAGTCTCGAGTG+TGG 0.619232 7.1:-14671167 None:intergenic
CTCCGGTCCATCATCTGTAA+GGG 0.619971 7.1:-14670641 None:intergenic
GATCGTCTTAGAAGTATCGC+CGG 0.621352 7.1:+14671826 MS.gene017959:CDS
TCGATAGCTTTGCACCGAGG+TGG 0.623002 7.1:+14671002 MS.gene017959:CDS
GACGTGTGTCCATGTGAGGT+GGG 0.624040 7.1:-14671708 None:intergenic
AAAGAGACCAAACCCCACCT+TGG 0.627049 7.1:+14669819 MS.gene017959:CDS
GAGTTTGGTACTATAGATGG+AGG 0.627109 7.1:+14671677 MS.gene017959:CDS
GTGGAATGAGCAGTATACTT+GGG 0.627653 7.1:+14671021 MS.gene017959:CDS
GTGGAATATATGCTGGATGT+CGG 0.627998 7.1:+14671442 MS.gene017959:CDS
CTAACAAAGAGGAACTGCTA+GGG 0.630417 7.1:+14670606 MS.gene017959:CDS
TCTTGCAAATATTAGGTCGA+AGG 0.630876 7.1:+14670340 MS.gene017959:CDS
GGTACTATAGATGGAGGCCA+AGG 0.630984 7.1:+14671683 MS.gene017959:CDS
CTTTGCTACACAGTAAGCAT+CGG 0.631955 7.1:-14670945 None:intergenic
CGATGAAATCAAATAATGGG+AGG 0.632153 7.1:+14670915 MS.gene017959:CDS
GATACTGCATTTGCTCAACA+AGG 0.633581 7.1:-14669881 None:intergenic
TTTGAAACAACAAGATGCAG+AGG 0.633933 7.1:+14669772 None:intergenic
CTCCAGGCTTATCACCACCA+TGG 0.635088 7.1:-14671102 None:intergenic
ATCAAATCCTCATTCCACAT+CGG 0.635499 7.1:-14670521 None:intergenic
TCCACTACCTCCTTTCTCAG+TGG 0.637195 7.1:-14671424 None:intergenic
ACTACCTCCTTTCTCAGTGG+CGG 0.637292 7.1:-14671421 None:intergenic
ACTCTTCATCTAGTTCGTCA+GGG 0.644466 7.1:-14671753 None:intergenic
GATGAAATCAAATAATGGGA+GGG 0.644856 7.1:+14670916 MS.gene017959:CDS
GAATGAGCAGTATACTTGGG+AGG 0.645094 7.1:+14671024 MS.gene017959:CDS
TCCTCCACACTCAAAATCAG+TGG 0.646052 7.1:-14670572 None:intergenic
CAGAGACCTTACCACCAAGG+TGG 0.649836 7.1:-14669833 None:intergenic
TAGGATACAAACTGTTGTCG+GGG 0.649861 7.1:+14671849 MS.gene017959:CDS
TTTGAGGGTTAATGTGATCG+AGG 0.650146 7.1:+14670388 MS.gene017959:CDS
ATGAGGGTCTGTCTAGAAGG+TGG 0.652057 7.1:+14670770 MS.gene017959:CDS
AACCTCCTGAAGAAATTGAG+TGG 0.658154 7.1:-14672063 None:intergenic
TAGGGTTGCGCCTAACAAAG+AGG 0.658831 7.1:+14670595 MS.gene017959:CDS
CAAGACCTTCTGACATCGTG+AGG 0.659186 7.1:+14671794 MS.gene017959:CDS
TGGATGTCGGTTCCCACATG+TGG 0.659218 7.1:+14671455 MS.gene017959:CDS
CTTCTTCTCGAAATGCCTCG+TGG 0.659513 7.1:-14670003 None:intergenic
GTTGGATGAAGAACTAGAAG+CGG 0.659701 7.1:-14671205 None:intergenic
GTCTTAGAAGTATCGCCGGT+AGG 0.663223 7.1:+14671830 MS.gene017959:CDS
TTTATGTGTTGAGACATCCA+AGG 0.671355 7.1:+14672016 MS.gene017959:CDS
CTCCAGAGACCTTACCACCA+AGG 0.672025 7.1:-14669836 None:intergenic
TCTAGTTCTTCATCCAACTG+GGG 0.674320 7.1:+14671210 MS.gene017959:CDS
GCAGGAGTATCAATCCGATG+TGG 0.681926 7.1:+14670507 MS.gene017959:CDS
GATAACTGTCACTTGCACCA+TGG 0.683890 7.1:+14671085 MS.gene017959:CDS
ATCTCAATGAGATTCCGAAG+AGG 0.685604 7.1:+14670150 MS.gene017959:CDS
GAGACCTTACCACCAAGGTG+GGG 0.689512 7.1:-14669831 None:intergenic
GAGAGACGTGTGTCCATGTG+AGG 0.692622 7.1:-14671712 None:intergenic
TCTTCGCATACTCCACATGT+GGG 0.694693 7.1:-14671467 None:intergenic
GGCGCCAGAGGACTATCAGG+AGG 0.702158 7.1:-14670176 None:intergenic
TGAGCCGCCACTGAGAAAGG+AGG 0.716833 7.1:+14671417 MS.gene017959:CDS
GTATACTGCTCATTCCACCT+CGG 0.723662 7.1:-14671016 None:intergenic
AACTGTCACTTGCACCATGG+TGG 0.724351 7.1:+14671088 MS.gene017959:CDS
TCATCGATAGCTTTGCACCG+AGG 0.746528 7.1:+14670999 MS.gene017959:CDS
CATGGTGGTGATAAGCCTGG+AGG 0.753318 7.1:+14671103 MS.gene017959:CDS
TCCTCCAATCTATACCACTG+CGG 0.756616 7.1:-14670197 None:intergenic
TGATAAGGGAAGATTCCCGG+AGG 0.760486 7.1:+14670430 MS.gene017959:CDS
GTAATTACAAAGGAACCACG+AGG 0.808607 7.1:+14669988 MS.gene017959:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAATGCAGTATCTTTATGTT+AGG + chr7.1:14669892-14669911 MS.gene017959:CDS 25.0%
! AATGCAGTATCTTTATGTTA+GGG + chr7.1:14669893-14669912 MS.gene017959:CDS 25.0%
!! TGAAAAGCATGTTGTTATTA+TGG + chr7.1:14670703-14670722 MS.gene017959:CDS 25.0%
!! TTTGTGAAGGATGATTTTAT+CGG + chr7.1:14670113-14670132 MS.gene017959:CDS 25.0%
AAGAGGTAAAGGAAAATTGT+TGG - chr7.1:14671649-14671668 None:intergenic 30.0%
ATGCCGATGAAATCAAATAA+TGG + chr7.1:14670911-14670930 MS.gene017959:CDS 30.0%
GGACAAAGAGATTCAAAAAT+CGG + chr7.1:14671124-14671143 MS.gene017959:CDS 30.0%
TCTTTCAACAGAAAATCTTC+TGG - chr7.1:14669804-14669823 None:intergenic 30.0%
TGCCGATGAAATCAAATAAT+GGG + chr7.1:14670912-14670931 MS.gene017959:CDS 30.0%
! AAGCATGTTGTTATTATGGA+AGG + chr7.1:14670707-14670726 MS.gene017959:CDS 30.0%
! AGCATGTTGTTATTATGGAA+GGG + chr7.1:14670708-14670727 MS.gene017959:CDS 30.0%
! ATGAAATCAAATAATGGGAG+GGG + chr7.1:14670917-14670936 MS.gene017959:CDS 30.0%
! ATTGTTGGTAAGATAAGTTC+AGG - chr7.1:14671634-14671653 None:intergenic 30.0%
! CTCCCATTATTTGATTTCAT+CGG - chr7.1:14670917-14670936 None:intergenic 30.0%
! GAAAGATAAGGATTTTGTGA+AGG + chr7.1:14670100-14670119 MS.gene017959:CDS 30.0%
! GATGAAATCAAATAATGGGA+GGG + chr7.1:14670916-14670935 MS.gene017959:CDS 30.0%
! TGAGGTTTTTGTGAAAGATA+AGG + chr7.1:14670088-14670107 MS.gene017959:CDS 30.0%
! TTCCTTTACCTCTTTTTGAT+TGG + chr7.1:14671655-14671674 MS.gene017959:CDS 30.0%
! TTGTTGGTAAGATAAGTTCA+GGG - chr7.1:14671633-14671652 None:intergenic 30.0%
!! GTTTATGTGAAGGCTATTTT+GGG + chr7.1:14670452-14670471 MS.gene017959:CDS 30.0%
!!! AGCCAATTTTTTCAGAATCA+TGG + chr7.1:14671495-14671514 MS.gene017959:CDS 30.0%
!!! CAATTTTTTCAGAATCATGG+GGG + chr7.1:14671498-14671517 MS.gene017959:CDS 30.0%
!!! CCAATTTTTTCAGAATCATG+GGG + chr7.1:14671497-14671516 MS.gene017959:CDS 30.0%
!!! GCCAATTTTTTCAGAATCAT+GGG + chr7.1:14671496-14671515 MS.gene017959:CDS 30.0%
!!! TTTTTGCTTTTTCGAAGGAT+CGG + chr7.1:14670048-14670067 MS.gene017959:CDS 30.0%
ACCAAACTCCAATCAAAAAG+AGG - chr7.1:14671666-14671685 None:intergenic 35.0%
AGAAGAAGACTAATCCTGAA+TGG + chr7.1:14670018-14670037 MS.gene017959:CDS 35.0%
AGCAAAGTATGGACAGAAAT+GGG + chr7.1:14670961-14670980 MS.gene017959:CDS 35.0%
ATCAAATCCTCATTCCACAT+CGG - chr7.1:14670524-14670543 None:intergenic 35.0%
CAAGCTTGACTTCAACATAA+GGG - chr7.1:14669968-14669987 None:intergenic 35.0%
CTCCAATCAAAAAGAGGTAA+AGG - chr7.1:14671660-14671679 None:intergenic 35.0%
CTGATGCTCTTGCAAATATT+AGG + chr7.1:14670333-14670352 MS.gene017959:CDS 35.0%
GAAAATGGGAGAAATTCAAC+TGG + chr7.1:14671237-14671256 MS.gene017959:CDS 35.0%
GAATCAGAACTGTTGTGATA+GGG - chr7.1:14671582-14671601 None:intergenic 35.0%
GAATGAGGATTTGATGTTTG+TGG + chr7.1:14670529-14670548 MS.gene017959:CDS 35.0%
GGATGAATGTAATGCATCTT+GGG - chr7.1:14671325-14671344 None:intergenic 35.0%
TAGCAAAGTATGGACAGAAA+TGG + chr7.1:14670960-14670979 MS.gene017959:CDS 35.0%
TCTTGCAAATATTAGGTCGA+AGG + chr7.1:14670340-14670359 MS.gene017959:CDS 35.0%
TCTTTATGTTAGGGTTGTGA+AGG + chr7.1:14669902-14669921 MS.gene017959:CDS 35.0%
TGAATCAGAACTGTTGTGAT+AGG - chr7.1:14671583-14671602 None:intergenic 35.0%
TGGATGAATGTAATGCATCT+TGG - chr7.1:14671326-14671345 None:intergenic 35.0%
TGTATCTATCTCCTAAGCTT+TGG + chr7.1:14670363-14670382 MS.gene017959:CDS 35.0%
TGTTATTCCCTTACAGATGA+TGG + chr7.1:14670634-14670653 MS.gene017959:CDS 35.0%
TTCAACAGAAAATCTTCTGG+AGG - chr7.1:14669801-14669820 None:intergenic 35.0%
TTGGAGTTTGGTACTATAGA+TGG + chr7.1:14671674-14671693 MS.gene017959:CDS 35.0%
TTTATGTGTTGAGACATCCA+AGG + chr7.1:14672016-14672035 MS.gene017959:CDS 35.0%
! AGAAGGTGGTTATCATGTTT+TGG + chr7.1:14670784-14670803 MS.gene017959:CDS 35.0%
! ATGATTTTATCGGTCGTGTT+TGG + chr7.1:14670123-14670142 MS.gene017959:CDS 35.0%
! CCCCATGATTCTGAAAAAAT+TGG - chr7.1:14671500-14671519 None:intergenic 35.0%
! CGATGAAATCAAATAATGGG+AGG + chr7.1:14670915-14670934 MS.gene017959:CDS 35.0%
! GATTAATTGCTGTTGGAAAG+TGG + chr7.1:14671530-14671549 MS.gene017959:CDS 35.0%
! GCATGTTGTTATTATGGAAG+GGG + chr7.1:14670709-14670728 MS.gene017959:CDS 35.0%
! GGTTTATGTGAAGGCTATTT+TGG + chr7.1:14670451-14670470 MS.gene017959:CDS 35.0%
! GGTTTTTCCAATTGCAGATT+TGG - chr7.1:14671561-14671580 None:intergenic 35.0%
! GTCAAGCTTGGTAATTACAA+AGG + chr7.1:14669978-14669997 MS.gene017959:CDS 35.0%
! TCCTAAGCTTTGGTATTTGA+GGG + chr7.1:14670373-14670392 MS.gene017959:CDS 35.0%
! TGAAATCAAATAATGGGAGG+GGG + chr7.1:14670918-14670937 MS.gene017959:CDS 35.0%
!! ACCTCTTTTTGATTGGAGTT+TGG + chr7.1:14671662-14671681 MS.gene017959:CDS 35.0%
!! TTCTAGTTCTTCATCCAACT+GGG + chr7.1:14671209-14671228 MS.gene017959:CDS 35.0%
!! TTGAGTGGATTAATTGCTGT+TGG + chr7.1:14671523-14671542 MS.gene017959:CDS 35.0%
!!! AGTATTGGAGTTTTGGAAGT+GGG + chr7.1:14670866-14670885 MS.gene017959:CDS 35.0%
!!! TCAGGTTTTTGCTTTTTCGA+AGG + chr7.1:14670043-14670062 MS.gene017959:CDS 35.0%
AAAATCAGTGGCTCCTCAAA+CGG - chr7.1:14670563-14670582 None:intergenic 40.0%
AACCTCCTGAAGAAATTGAG+TGG - chr7.1:14672066-14672085 None:intergenic 40.0%
AAGAAATTGAGTGGCACAGA+AGG - chr7.1:14672057-14672076 None:intergenic 40.0%
ACAAACCTGTGAACACTAGA+TGG + chr7.1:14670672-14670691 MS.gene017959:CDS 40.0%
ACCCTCAAATACCAAAGCTT+AGG - chr7.1:14670377-14670396 None:intergenic 40.0%
AGAAGAGCCACAACTTGAAA+TGG - chr7.1:14671988-14672007 None:intergenic 40.0%
AGGAAATCAAGTTTGCAAGC+AGG + chr7.1:14670741-14670760 MS.gene017959:CDS 40.0%
AGTGGGGATATTGAATGCTT+CGG + chr7.1:14670883-14670902 MS.gene017959:CDS 40.0%
AGTGGTATAGATTGGAGGAT+AGG + chr7.1:14670201-14670220 MS.gene017959:CDS 40.0%
ATAGCCTTCACATAAACCTC+CGG - chr7.1:14670449-14670468 None:intergenic 40.0%
ATCTCAATGAGATTCCGAAG+AGG + chr7.1:14670150-14670169 MS.gene017959:CDS 40.0%
ATGAAGAACTAGAAGCGGAT+AGG - chr7.1:14671203-14671222 None:intergenic 40.0%
CATTTGCTCAACAAGGTCAT+AGG - chr7.1:14669877-14669896 None:intergenic 40.0%
CCAAGCTTGACTTCAACATA+AGG - chr7.1:14669969-14669988 None:intergenic 40.0%
CCAATTGTAATGACAGTGCA+CGG - chr7.1:14671058-14671077 None:intergenic 40.0%
CCTTATGTTGAAGTCAAGCT+TGG + chr7.1:14669966-14669985 MS.gene017959:CDS 40.0%
CTAACAAAGAGGAACTGCTA+GGG + chr7.1:14670606-14670625 MS.gene017959:CDS 40.0%
CTTTGCTACACAGTAAGCAT+CGG - chr7.1:14670948-14670967 None:intergenic 40.0%
GACAACAGTTTGTATCCTAC+CGG - chr7.1:14671848-14671867 None:intergenic 40.0%
GACTAATCCTGAATGGAATC+AGG + chr7.1:14670025-14670044 MS.gene017959:CDS 40.0%
GAGAAATTCAACTGGCTGTA+AGG + chr7.1:14671245-14671264 MS.gene017959:CDS 40.0%
GAGTTTGGTACTATAGATGG+AGG + chr7.1:14671677-14671696 MS.gene017959:CDS 40.0%
GATACTGCATTTGCTCAACA+AGG - chr7.1:14669884-14669903 None:intergenic 40.0%
GCAAAAACCTGATTCCATTC+AGG - chr7.1:14670035-14670054 None:intergenic 40.0%
GCTTACTGTGTAGCAAAGTA+TGG + chr7.1:14670950-14670969 MS.gene017959:CDS 40.0%
GGTAGGATACAAACTGTTGT+CGG + chr7.1:14671847-14671866 MS.gene017959:CDS 40.0%
GGTTTGACCAAATCTGCAAT+TGG + chr7.1:14671551-14671570 MS.gene017959:CDS 40.0%
GTAATTACAAAGGAACCACG+AGG + chr7.1:14669988-14670007 MS.gene017959:CDS 40.0%
GTAGGATACAAACTGTTGTC+GGG + chr7.1:14671848-14671867 MS.gene017959:CDS 40.0%
GTGGAATATATGCTGGATGT+CGG + chr7.1:14671442-14671461 MS.gene017959:CDS 40.0%
GTGGAATGAGCAGTATACTT+GGG + chr7.1:14671021-14671040 MS.gene017959:CDS 40.0%
GTTGGATGAAGAACTAGAAG+CGG - chr7.1:14671208-14671227 None:intergenic 40.0%
TAGGATACAAACTGTTGTCG+GGG + chr7.1:14671849-14671868 MS.gene017959:CDS 40.0%
TATCAATCCGATGTGGAATG+AGG + chr7.1:14670514-14670533 MS.gene017959:CDS 40.0%
TCTCAATGAGATTCCGAAGA+GGG + chr7.1:14670151-14670170 MS.gene017959:CDS 40.0%
TGCAAGCAGGATTCATATGA+GGG + chr7.1:14670754-14670773 MS.gene017959:CDS 40.0%
TTGAACCATCTAGTGTTCAC+AGG - chr7.1:14670680-14670699 None:intergenic 40.0%
TTGCAAGCAGGATTCATATG+AGG + chr7.1:14670753-14670772 MS.gene017959:CDS 40.0%
TTTGAATCTCTTTGTCCTCC+AGG - chr7.1:14671121-14671140 None:intergenic 40.0%
TTTGAGGGTTAATGTGATCG+AGG + chr7.1:14670388-14670407 MS.gene017959:CDS 40.0%
! AACAGAAAATCTTCTGGAGG+AGG - chr7.1:14669798-14669817 None:intergenic 40.0%
! AACTCTTCATCTAGTTCGTC+AGG - chr7.1:14671757-14671776 None:intergenic 40.0%
! ACAAAAAGTGCAGTAGCTCT+TGG - chr7.1:14671925-14671944 None:intergenic 40.0%
! ACTCTTCATCTAGTTCGTCA+GGG - chr7.1:14671756-14671775 None:intergenic 40.0%
! CTCCTAAGCTTTGGTATTTG+AGG + chr7.1:14670372-14670391 MS.gene017959:CDS 40.0%
!! CTTCTAGTTCTTCATCCAAC+TGG + chr7.1:14671208-14671227 MS.gene017959:CDS 40.0%
!! GATTTTGAGTGTGGAGGATA+GGG + chr7.1:14670577-14670596 MS.gene017959:CDS 40.0%
!! TCTAGTTCTTCATCCAACTG+GGG + chr7.1:14671210-14671229 MS.gene017959:CDS 40.0%
!! TGATTTTGAGTGTGGAGGAT+AGG + chr7.1:14670576-14670595 MS.gene017959:CDS 40.0%
!! TGTGACTCCATTTCAAGTTG+TGG + chr7.1:14671978-14671997 MS.gene017959:CDS 40.0%
!! TTTTGGGAAATCAGACCTTG+AGG + chr7.1:14670468-14670487 MS.gene017959:CDS 40.0%
!! TTTTTCGAAGGATCGGATTC+AGG + chr7.1:14670055-14670074 MS.gene017959:CDS 40.0%
!!! GAAGTCGAGTATTGGAGTTT+TGG + chr7.1:14670859-14670878 MS.gene017959:CDS 40.0%
!!! GAGTATTGGAGTTTTGGAAG+TGG + chr7.1:14670865-14670884 MS.gene017959:CDS 40.0%
!!! GTATTGGAGTTTTGGAAGTG+GGG + chr7.1:14670867-14670886 MS.gene017959:CDS 40.0%
ACAAACTGTTGTCGGGGATT+TGG + chr7.1:14671855-14671874 MS.gene017959:CDS 45.0%
AGCATGCAATCAGTTCTTGC+AGG - chr7.1:14672090-14672109 None:intergenic 45.0%
AGGAAGAGTGATAAGGTGAG+AGG + chr7.1:14670221-14670240 MS.gene017959:CDS 45.0%
ATTCCCGGAGGTTTATGTGA+AGG + chr7.1:14670442-14670461 MS.gene017959:CDS 45.0%
CATATGAGGGTCTGTCTAGA+AGG + chr7.1:14670767-14670786 MS.gene017959:CDS 45.0%
CCAACTGGGGTGAAGAAAAT+GGG + chr7.1:14671223-14671242 MS.gene017959:CDS 45.0%
CCGTGCACTGTCATTACAAT+TGG + chr7.1:14671055-14671074 MS.gene017959:CDS 45.0%
CCTAACAAAGAGGAACTGCT+AGG + chr7.1:14670605-14670624 MS.gene017959:CDS 45.0%
CCTAGCAGTTCCTCTTTGTT+AGG - chr7.1:14670608-14670627 None:intergenic 45.0%
CTACCTGCGAAAGATGTTAC+TGG + chr7.1:14669933-14669952 MS.gene017959:CDS 45.0%
CTGAGAGATTCTAGTCCTCA+AGG - chr7.1:14670486-14670505 None:intergenic 45.0%
CTTCCAGTAACATCTTTCGC+AGG - chr7.1:14669939-14669958 None:intergenic 45.0%
GAAGAGTGATAAGGTGAGAG+GGG + chr7.1:14670223-14670242 MS.gene017959:CDS 45.0%
GAATGAGCAGTATACTTGGG+AGG + chr7.1:14671024-14671043 MS.gene017959:CDS 45.0%
GACTTGCAACCGTCTGATAA+GGG + chr7.1:14670416-14670435 MS.gene017959:CDS 45.0%
GGAAGAGTGATAAGGTGAGA+GGG + chr7.1:14670222-14670241 MS.gene017959:CDS 45.0%
GGAGGATAGGAAGAGTGATA+AGG + chr7.1:14670214-14670233 MS.gene017959:CDS 45.0%
GGGAATCTTCCCTTATCAGA+CGG - chr7.1:14670428-14670447 None:intergenic 45.0%
GGTGGAATGAGCAGTATACT+TGG + chr7.1:14671020-14671039 MS.gene017959:CDS 45.0%
GTATACTGCTCATTCCACCT+CGG - chr7.1:14671019-14671038 None:intergenic 45.0%
GTCTGATAAGGGAAGATTCC+CGG + chr7.1:14670427-14670446 MS.gene017959:CDS 45.0%
GTGGGGATATTGAATGCTTC+GGG + chr7.1:14670884-14670903 MS.gene017959:CDS 45.0%
TAATGCATCTTGGGCAGCAA+TGG - chr7.1:14671316-14671335 None:intergenic 45.0%
TAGCCTTCACATAAACCTCC+GGG - chr7.1:14670448-14670467 None:intergenic 45.0%
TATGGAAGGGGACAAGAAGA+AGG + chr7.1:14670721-14670740 MS.gene017959:CDS 45.0%
TCCAACTGGGGTGAAGAAAA+TGG + chr7.1:14671222-14671241 MS.gene017959:CDS 45.0%
TCCTCCAATCTATACCACTG+CGG - chr7.1:14670200-14670219 None:intergenic 45.0%
TCCTCCACACTCAAAATCAG+TGG - chr7.1:14670575-14670594 None:intergenic 45.0%
TCTTCGCATACTCCACATGT+GGG - chr7.1:14671470-14671489 None:intergenic 45.0%
TGCCACTCAATTTCTTCAGG+AGG + chr7.1:14672061-14672080 MS.gene017959:CDS 45.0%
TTCTTCGCATACTCCACATG+TGG - chr7.1:14671471-14671490 None:intergenic 45.0%
! ATGTCAGAAGGTCTTGTGGT+TGG - chr7.1:14671790-14671809 None:intergenic 45.0%
! CTGTGCCACTCAATTTCTTC+AGG + chr7.1:14672058-14672077 MS.gene017959:CDS 45.0%
! GATAACTGTCACTTGCACCA+TGG + chr7.1:14671085-14671104 MS.gene017959:CDS 45.0%
!! GATCGTCTTAGAAGTATCGC+CGG + chr7.1:14671826-14671845 MS.gene017959:CDS 45.0%
!! GGAGGTAGTGGAATATATGC+TGG + chr7.1:14671435-14671454 MS.gene017959:CDS 45.0%
!! TTCCCTTACAGATGATGGAC+CGG + chr7.1:14670639-14670658 MS.gene017959:CDS 45.0%
!!! AGAATCATGGGGGTTTTGAG+TGG + chr7.1:14671508-14671527 MS.gene017959:CDS 45.0%
AAAGAGACCAAACCCCACCT+TGG + chr7.1:14669819-14669838 MS.gene017959:CDS 50.0%
ACTACCTCCTTTCTCAGTGG+CGG - chr7.1:14671424-14671443 None:intergenic 50.0%
AGAGACCTTACCACCAAGGT+GGG - chr7.1:14669835-14669854 None:intergenic 50.0%
ATCTTTCGCAGGTAGCTCCT+TGG - chr7.1:14669928-14669947 None:intergenic 50.0%
ATGAGGGTCTGTCTAGAAGG+TGG + chr7.1:14670770-14670789 MS.gene017959:CDS 50.0%
CAAGACCTTCTGACATCGTG+AGG + chr7.1:14671794-14671813 MS.gene017959:CDS 50.0%
CAAGTTGTGGCTCTTCTCAC+TGG + chr7.1:14671991-14672010 MS.gene017959:CDS 50.0%
CACGATGTCAGAAGGTCTTG+TGG - chr7.1:14671794-14671813 None:intergenic 50.0%
CAGCTGTGGAAGTCGAGTAT+TGG + chr7.1:14670851-14670870 MS.gene017959:CDS 50.0%
CAGGTTTGTGATCGAGTCTC+CGG - chr7.1:14670661-14670680 None:intergenic 50.0%
CAGTAGTGATCTTCGCCCAA+CGG + chr7.1:14670823-14670842 MS.gene017959:CDS 50.0%
CAGTCTCGAGTGTGGAAAGA+CGG - chr7.1:14671162-14671181 None:intergenic 50.0%
CGGTGCAAAGCTATCGATGA+TGG - chr7.1:14670999-14671018 None:intergenic 50.0%
CTATCAGGAGGAACCCTCTT+CGG - chr7.1:14670167-14670186 None:intergenic 50.0%
CTCCGGTCCATCATCTGTAA+GGG - chr7.1:14670644-14670663 None:intergenic 50.0%
CTTCTTCTCGAAATGCCTCG+TGG - chr7.1:14670006-14670025 None:intergenic 50.0%
GAAGGATCGGATTCAGGCTT+CGG + chr7.1:14670061-14670080 MS.gene017959:CDS 50.0%
GATTCAGGCTTCGGTTCTTG+AGG + chr7.1:14670070-14670089 MS.gene017959:CDS 50.0%
GGAAGCTTGTGACGAAACCT+TGG - chr7.1:14672036-14672055 None:intergenic 50.0%
GGACTAGAATCTCTCAGAGC+AGG + chr7.1:14670489-14670508 MS.gene017959:CDS 50.0%
GGACTTGCAACCGTCTGATA+AGG + chr7.1:14670415-14670434 MS.gene017959:CDS 50.0%
GGTACTATAGATGGAGGCCA+AGG + chr7.1:14671683-14671702 MS.gene017959:CDS 50.0%
GGTTAATGTGATCGAGGCAC+AGG + chr7.1:14670394-14670413 MS.gene017959:CDS 50.0%
TAGGGTTGCGCCTAACAAAG+AGG + chr7.1:14670595-14670614 MS.gene017959:CDS 50.0%
TCCACTACCTCCTTTCTCAG+TGG - chr7.1:14671427-14671446 None:intergenic 50.0%
TCGAGCTGGCTGACTGTTAA+TGG - chr7.1:14671346-14671365 None:intergenic 50.0%
TCTCCGGTCCATCATCTGTA+AGG - chr7.1:14670645-14670664 None:intergenic 50.0%
TGATAAGGGAAGATTCCCGG+AGG + chr7.1:14670430-14670449 MS.gene017959:CDS 50.0%
TGTTAGGGTTGTGAAGGCCA+AGG + chr7.1:14669908-14669927 MS.gene017959:CDS 50.0%
! AACTGTCACTTGCACCATGG+TGG + chr7.1:14671088-14671107 MS.gene017959:CDS 50.0%
! AGCTGATGAAGCGTTTCCTG+AGG + chr7.1:14670277-14670296 MS.gene017959:CDS 50.0%
! ATCTAGTTCGTCAGGGTGTG+CGG - chr7.1:14671749-14671768 None:intergenic 50.0%
! CCCATTTTCTTCACCCCAGT+TGG - chr7.1:14671226-14671245 None:intergenic 50.0%
! CTGATGCTGGCTGTTTGGAT+GGG + chr7.1:14670248-14670267 MS.gene017959:CDS 50.0%
! TCATCGATAGCTTTGCACCG+AGG + chr7.1:14670999-14671018 MS.gene017959:CDS 50.0%
!! GCAGGAGTATCAATCCGATG+TGG + chr7.1:14670507-14670526 MS.gene017959:CDS 50.0%
!! GTCTTAGAAGTATCGCCGGT+AGG + chr7.1:14671830-14671849 MS.gene017959:CDS 50.0%
!!! GCCACTGATTTTGAGTGTGG+AGG + chr7.1:14670571-14670590 MS.gene017959:CDS 50.0%
!!! GGAGCCACTGATTTTGAGTG+TGG + chr7.1:14670568-14670587 MS.gene017959:CDS 50.0%
AGACGTGTGTCCATGTGAGG+TGG - chr7.1:14671712-14671731 None:intergenic 55.0%
AGGGTGTGCGGAATCAGCAT+GGG - chr7.1:14671737-14671756 None:intergenic 55.0%
CAGAGACCTTACCACCAAGG+TGG - chr7.1:14669836-14669855 None:intergenic 55.0%
CGCATCCTCACGATGTCAGA+AGG - chr7.1:14671802-14671821 None:intergenic 55.0%
CTCAGCACGGCTAAGTCTCA+TGG - chr7.1:14671401-14671420 None:intergenic 55.0%
CTCCAGAGACCTTACCACCA+AGG - chr7.1:14669839-14669858 None:intergenic 55.0%
CTCCAGGCTTATCACCACCA+TGG - chr7.1:14671105-14671124 None:intergenic 55.0%
CTTACCACCAAGGTGGGGTT+TGG - chr7.1:14669829-14669848 None:intergenic 55.0%
GACGTGTGTCCATGTGAGGT+GGG - chr7.1:14671711-14671730 None:intergenic 55.0%
GACTCGATCAGTCTCGAGTG+TGG - chr7.1:14671170-14671189 None:intergenic 55.0%
GACTGCAGTCTTTGCTCAGC+TGG + chr7.1:14671893-14671912 MS.gene017959:CDS 55.0%
GAGACCTTACCACCAAGGTG+GGG - chr7.1:14669834-14669853 None:intergenic 55.0%
GAGAGACGTGTGTCCATGTG+AGG - chr7.1:14671715-14671734 None:intergenic 55.0%
GCCACTGAGAAAGGAGGTAG+TGG + chr7.1:14671423-14671442 MS.gene017959:CDS 55.0%
GCCGCAGTGGTATAGATTGG+AGG + chr7.1:14670196-14670215 MS.gene017959:CDS 55.0%
GGTTCCTCCTGATAGTCCTC+TGG + chr7.1:14670172-14670191 MS.gene017959:CDS 55.0%
TGTGGCTGCAGAACCGTTTG+AGG + chr7.1:14670547-14670566 MS.gene017959:CDS 55.0%
! ATGAAGCGTTTCCTGAGGCG+TGG + chr7.1:14670282-14670301 MS.gene017959:CDS 55.0%
! CAAACCCCACCTTGGTGGTA+AGG + chr7.1:14669827-14669846 MS.gene017959:CDS 55.0%
! CACCATGGTGGTGATAAGCC+TGG + chr7.1:14671100-14671119 MS.gene017959:CDS 55.0%
! CACCTTGGTGGTAAGGTCTC+TGG + chr7.1:14669834-14669853 MS.gene017959:CDS 55.0%
! CATGGTGGTGATAAGCCTGG+AGG + chr7.1:14671103-14671122 MS.gene017959:CDS 55.0%
! GCTGATGCTGGCTGTTTGGA+TGG + chr7.1:14670247-14670266 MS.gene017959:CDS 55.0%
! TCCACAGCTGTTTCGCCGTT+GGG - chr7.1:14670841-14670860 None:intergenic 55.0%
! TCGATAGCTTTGCACCGAGG+TGG + chr7.1:14671002-14671021 MS.gene017959:CDS 55.0%
! TTCCACAGCTGTTTCGCCGT+TGG - chr7.1:14670842-14670861 None:intergenic 55.0%
!! TGGATGTCGGTTCCCACATG+TGG + chr7.1:14671455-14671474 MS.gene017959:CDS 55.0%
CAGGGTGTGCGGAATCAGCA+TGG - chr7.1:14671738-14671757 None:intergenic 60.0%
GAGACCAAACCCCACCTTGG+TGG + chr7.1:14669822-14669841 MS.gene017959:CDS 60.0%
GATGCCTCAGACTGTCGAGC+TGG - chr7.1:14671360-14671379 None:intergenic 60.0%
GGCGCCGCAGTGGTATAGAT+TGG + chr7.1:14670193-14670212 MS.gene017959:CDS 60.0%
GTCGGGGATTTGGCGACTCA+AGG + chr7.1:14671865-14671884 MS.gene017959:CDS 60.0%
GTTTCCTGAGGCGTGGCACT+CGG + chr7.1:14670289-14670308 MS.gene017959:CDS 60.0%
TCAGCCAGCTCGACAGTCTG+AGG + chr7.1:14671353-14671372 MS.gene017959:CDS 60.0%
TCCATGTGAGGTGGGTGCCT+TGG - chr7.1:14671703-14671722 None:intergenic 60.0%
TGAGCCGCCACTGAGAAAGG+AGG + chr7.1:14671417-14671436 MS.gene017959:CDS 60.0%
TGCTGAGCCGCCACTGAGAA+AGG + chr7.1:14671414-14671433 MS.gene017959:CDS 60.0%
TTCTCAGTGGCGGCTCAGCA+CGG - chr7.1:14671414-14671433 None:intergenic 60.0%
! GGGAGCTGATGCTGGCTGTT+TGG + chr7.1:14670243-14670262 MS.gene017959:CDS 60.0%
ATAGTCCTCTGGCGCCGCAG+TGG + chr7.1:14670183-14670202 MS.gene017959:CDS 65.0%
CTATACCACTGCGGCGCCAG+AGG - chr7.1:14670191-14670210 None:intergenic 65.0%
GCCCAACGGCGAAACAGCTG+TGG + chr7.1:14670837-14670856 MS.gene017959:CDS 65.0%
GGCGCCAGAGGACTATCAGG+AGG - chr7.1:14670179-14670198 None:intergenic 65.0%
GGTGAGAGGGGAGCTGATGC+TGG + chr7.1:14670235-14670254 MS.gene017959:CDS 65.0%
TCGGATGCGGCGACGGTTAG+TGG + chr7.1:14670308-14670327 MS.gene017959:CDS 65.0%
TGAGGCGTGGCACTCGGATG+CGG + chr7.1:14670295-14670314 MS.gene017959:CDS 65.0%
TGCGGCGCCAGAGGACTATC+AGG - chr7.1:14670182-14670201 None:intergenic 65.0%
! GCCAAGGCACCCACCTCACA+TGG + chr7.1:14671699-14671718 MS.gene017959:CDS 65.0%
GCATCCGAGTGCCACGCCTC+AGG - chr7.1:14670296-14670315 None:intergenic 70.0%
GTGGCACTCGGATGCGGCGA+CGG + chr7.1:14670301-14670320 MS.gene017959:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 14669786 14672113 14669786 ID=MS.gene017959
chr7.1 mRNA 14669786 14672113 14669786 ID=MS.gene017959.t1;Parent=MS.gene017959
chr7.1 exon 14669786 14672113 14669786 ID=MS.gene017959.t1.exon1;Parent=MS.gene017959.t1
chr7.1 CDS 14669786 14672113 14669786 ID=cds.MS.gene017959.t1;Parent=MS.gene017959.t1
Gene Sequence

>MS.gene017959

ATGCAGAGGCCTCCTCCAGAAGATTTTCTGTTGAAAGAGACCAAACCCCACCTTGGTGGTAAGGTCTCTGGAGACAAGCTTACAAGTACCTATGACCTTGTTGAGCAAATGCAGTATCTTTATGTTAGGGTTGTGAAGGCCAAGGAGCTACCTGCGAAAGATGTTACTGGAAGTTGTGACCCTTATGTTGAAGTCAAGCTTGGTAATTACAAAGGAACCACGAGGCATTTCGAGAAGAAGACTAATCCTGAATGGAATCAGGTTTTTGCTTTTTCGAAGGATCGGATTCAGGCTTCGGTTCTTGAGGTTTTTGTGAAAGATAAGGATTTTGTGAAGGATGATTTTATCGGTCGTGTTTGGTTTGATCTCAATGAGATTCCGAAGAGGGTTCCTCCTGATAGTCCTCTGGCGCCGCAGTGGTATAGATTGGAGGATAGGAAGAGTGATAAGGTGAGAGGGGAGCTGATGCTGGCTGTTTGGATGGGTACTCAAGCTGATGAAGCGTTTCCTGAGGCGTGGCACTCGGATGCGGCGACGGTTAGTGGTACTGATGCTCTTGCAAATATTAGGTCGAAGGTGTATCTATCTCCTAAGCTTTGGTATTTGAGGGTTAATGTGATCGAGGCACAGGACTTGCAACCGTCTGATAAGGGAAGATTCCCGGAGGTTTATGTGAAGGCTATTTTGGGAAATCAGACCTTGAGGACTAGAATCTCTCAGAGCAGGAGTATCAATCCGATGTGGAATGAGGATTTGATGTTTGTGGCTGCAGAACCGTTTGAGGAGCCACTGATTTTGAGTGTGGAGGATAGGGTTGCGCCTAACAAAGAGGAACTGCTAGGGAAGTGTGTTATTCCCTTACAGATGATGGACCGGAGACTCGATCACAAACCTGTGAACACTAGATGGTTCAATATTGAAAAGCATGTTGTTATTATGGAAGGGGACAAGAAGAAGGAAATCAAGTTTGCAAGCAGGATTCATATGAGGGTCTGTCTAGAAGGTGGTTATCATGTTTTGGATGAATCAACTCACTACAGTAGTGATCTTCGCCCAACGGCGAAACAGCTGTGGAAGTCGAGTATTGGAGTTTTGGAAGTGGGGATATTGAATGCTTCGGGTTTGATGCCGATGAAATCAAATAATGGGAGGGGGACTACCGATGCTTACTGTGTAGCAAAGTATGGACAGAAATGGGTGCGTACAAGAACCATCATCGATAGCTTTGCACCGAGGTGGAATGAGCAGTATACTTGGGAGGTTTTTGATCCGTGCACTGTCATTACAATTGGCGTATTCGATAACTGTCACTTGCACCATGGTGGTGATAAGCCTGGAGGACAAAGAGATTCAAAAATCGGCAAAGTAAGAATCCGTCTTTCCACACTCGAGACTGATCGAGTCTACACACATTCCTATCCGCTTCTAGTTCTTCATCCAACTGGGGTGAAGAAAATGGGAGAAATTCAACTGGCTGTAAGGTTTACTTGCTCTTCTTTGCTTAACATGATGCACATGTATTCAAATCCATTGCTGCCCAAGATGCATTACATTCATCCATTAACAGTCAGCCAGCTCGACAGTCTGAGGCATCAAGCTACTCAGATTGTTTCCATGAGACTTAGCCGTGCTGAGCCGCCACTGAGAAAGGAGGTAGTGGAATATATGCTGGATGTCGGTTCCCACATGTGGAGTATGCGAAGAAGCAAAGCCAATTTTTTCAGAATCATGGGGGTTTTGAGTGGATTAATTGCTGTTGGAAAGTGGTTTGACCAAATCTGCAATTGGAAAAACCCTATCACAACAGTTCTGATTCATATTTTATTTATAATACTTGTCATGTACCCTGAACTTATCTTACCAACAATTTTCCTTTACCTCTTTTTGATTGGAGTTTGGTACTATAGATGGAGGCCAAGGCACCCACCTCACATGGACACACGTCTCTCCCATGCTGATTCCGCACACCCTGACGAACTAGATGAAGAGTTCGACACATTTCCAACCACAAGACCTTCTGACATCGTGAGGATGCGATATGATCGTCTTAGAAGTATCGCCGGTAGGATACAAACTGTTGTCGGGGATTTGGCGACTCAAGGCGAAAGACTGCAGTCTTTGCTCAGCTGGAGAGATCCAAGAGCTACTGCACTTTTTGTGCTATTCTGTTTGATTGCTGCTATTGTACTTTATGTGACTCCATTTCAAGTTGTGGCTCTTCTCACTGGAATTTATGTGTTGAGACATCCAAGGTTTCGTCACAAGCTTCCTTCTGTGCCACTCAATTTCTTCAGGAGGTTGCCTGCAAGAACTGATTGCATGCTCTGA
Protein sequence

>MS.gene017959.t1

MQRPPPEDFLLKETKPHLGGKVSGDKLTSTYDLVEQMQYLYVRVVKAKELPAKDVTGSCDPYVEVKLGNYKGTTRHFEKKTNPEWNQVFAFSKDRIQASVLEVFVKDKDFVKDDFIGRVWFDLNEIPKRVPPDSPLAPQWYRLEDRKSDKVRGELMLAVWMGTQADEAFPEAWHSDAATVSGTDALANIRSKVYLSPKLWYLRVNVIEAQDLQPSDKGRFPEVYVKAILGNQTLRTRISQSRSINPMWNEDLMFVAAEPFEEPLILSVEDRVAPNKEELLGKCVIPLQMMDRRLDHKPVNTRWFNIEKHVVIMEGDKKKEIKFASRIHMRVCLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLEVGILNASGLMPMKSNNGRGTTDAYCVAKYGQKWVRTRTIIDSFAPRWNEQYTWEVFDPCTVITIGVFDNCHLHHGGDKPGGQRDSKIGKVRIRLSTLETDRVYTHSYPLLVLHPTGVKKMGEIQLAVRFTCSSLLNMMHMYSNPLLPKMHYIHPLTVSQLDSLRHQATQIVSMRLSRAEPPLRKEVVEYMLDVGSHMWSMRRSKANFFRIMGVLSGLIAVGKWFDQICNWKNPITTVLIHILFIILVMYPELILPTIFLYLFLIGVWYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTTRPSDIVRMRYDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVLFCLIAAIVLYVTPFQVVALLTGIYVLRHPRFRHKLPSVPLNFFRRLPARTDCML