Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018794.t1 | XP_013442140.1 | 99.4 | 798 | 4 | 1 | 1 | 798 | 1 | 797 | 0.00E+00 | 1619 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018794.t1 | Q9FL59 | 81.1 | 785 | 147 | 1 | 14 | 798 | 11 | 794 | 0.0e+00 | 1351.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018794.t1 | A0A072TRG9 | 99.4 | 798 | 4 | 1 | 1 | 798 | 1 | 797 | 0.0e+00 | 1619.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene018794 | MS.gene072379 | PPI |
MS.gene018794 | MS.gene003921 | PPI |
MS.gene056972 | MS.gene018794 | PPI |
MS.gene018794 | MS.gene90010 | PPI |
MS.gene018794 | MS.gene017959 | PPI |
MS.gene018794 | MS.gene54603 | PPI |
MS.gene056344 | MS.gene018794 | PPI |
MS.gene018794 | MS.gene84943 | PPI |
MS.gene97685 | MS.gene018794 | PPI |
MS.gene018794 | MS.gene04595 | PPI |
MS.gene018794 | MS.gene57362 | PPI |
MS.gene018794 | MS.gene018791 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018794.t1 | MTR_0291s0010 | 99.373 | 798 | 4 | 1 | 1 | 798 | 1 | 797 | 0.0 | 1644 |
MS.gene018794.t1 | MTR_3g027150 | 71.950 | 795 | 216 | 3 | 11 | 798 | 28 | 822 | 0.0 | 1247 |
MS.gene018794.t1 | MTR_4g023460 | 71.824 | 795 | 220 | 3 | 6 | 798 | 350 | 1142 | 0.0 | 1240 |
MS.gene018794.t1 | MTR_7g092770 | 67.468 | 790 | 239 | 6 | 10 | 798 | 3 | 775 | 0.0 | 1149 |
MS.gene018794.t1 | MTR_0305s0020 | 67.215 | 790 | 240 | 8 | 10 | 798 | 3 | 774 | 0.0 | 1120 |
MS.gene018794.t1 | MTR_4g066150 | 65.355 | 788 | 251 | 6 | 11 | 798 | 5 | 770 | 0.0 | 1080 |
MS.gene018794.t1 | MTR_5g010390 | 62.389 | 787 | 279 | 6 | 15 | 798 | 235 | 1007 | 0.0 | 1059 |
MS.gene018794.t1 | MTR_4g033215 | 59.671 | 791 | 301 | 5 | 9 | 798 | 271 | 1044 | 0.0 | 992 |
MS.gene018794.t1 | MTR_8g031270 | 57.034 | 789 | 316 | 8 | 15 | 798 | 233 | 1003 | 0.0 | 955 |
MS.gene018794.t1 | MTR_7g076900 | 56.426 | 817 | 316 | 10 | 4 | 798 | 215 | 1013 | 0.0 | 939 |
MS.gene018794.t1 | MTR_4g057675 | 51.010 | 792 | 358 | 10 | 14 | 798 | 15 | 783 | 0.0 | 776 |
MS.gene018794.t1 | MTR_4g107850 | 50.914 | 766 | 329 | 15 | 50 | 798 | 303 | 1038 | 0.0 | 757 |
MS.gene018794.t1 | MTR_6g027540 | 49.153 | 767 | 341 | 14 | 50 | 798 | 274 | 1009 | 0.0 | 743 |
MS.gene018794.t1 | MTR_4g071870 | 48.990 | 792 | 340 | 12 | 14 | 798 | 15 | 749 | 0.0 | 738 |
MS.gene018794.t1 | MTR_6g028050 | 47.513 | 764 | 367 | 12 | 48 | 798 | 284 | 1026 | 0.0 | 718 |
MS.gene018794.t1 | MTR_1g015540 | 43.550 | 783 | 407 | 13 | 26 | 792 | 4 | 767 | 0.0 | 635 |
MS.gene018794.t1 | MTR_5g096980 | 40.445 | 764 | 420 | 15 | 47 | 798 | 23 | 763 | 0.0 | 561 |
MS.gene018794.t1 | MTR_4g023250 | 65.385 | 130 | 43 | 1 | 668 | 797 | 1 | 128 | 9.04e-53 | 179 |
MS.gene018794.t1 | MTR_4g023230 | 46.721 | 122 | 50 | 1 | 585 | 706 | 49 | 155 | 1.96e-31 | 120 |
MS.gene018794.t1 | MTR_4g023390 | 47.115 | 104 | 33 | 1 | 671 | 774 | 16 | 97 | 2.01e-26 | 104 |
MS.gene018794.t1 | MTR_4g023240 | 73.333 | 60 | 16 | 0 | 519 | 578 | 10 | 69 | 2.93e-23 | 94.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018794.t1 | AT5G06850 | 80.940 | 787 | 149 | 1 | 12 | 798 | 9 | 794 | 0.0 | 1374 |
MS.gene018794.t1 | AT5G48060 | 71.429 | 791 | 211 | 6 | 12 | 798 | 257 | 1036 | 0.0 | 1207 |
MS.gene018794.t1 | AT3G57880 | 67.342 | 790 | 238 | 9 | 10 | 798 | 3 | 773 | 0.0 | 1127 |
MS.gene018794.t1 | AT3G57880 | 67.342 | 790 | 238 | 9 | 10 | 798 | 3 | 773 | 0.0 | 1127 |
MS.gene018794.t1 | AT3G57880 | 67.342 | 790 | 238 | 9 | 10 | 798 | 3 | 773 | 0.0 | 1127 |
MS.gene018794.t1 | AT3G57880 | 67.342 | 790 | 238 | 9 | 10 | 798 | 3 | 773 | 0.0 | 1127 |
MS.gene018794.t1 | AT5G12970 | 65.570 | 790 | 248 | 7 | 10 | 798 | 3 | 769 | 0.0 | 1100 |
MS.gene018794.t1 | AT1G51570 | 64.981 | 791 | 258 | 8 | 10 | 798 | 3 | 776 | 0.0 | 1098 |
MS.gene018794.t1 | AT4G11610 | 61.845 | 802 | 279 | 8 | 1 | 798 | 233 | 1011 | 0.0 | 1053 |
MS.gene018794.t1 | AT4G11610 | 61.845 | 802 | 279 | 8 | 1 | 798 | 229 | 1007 | 0.0 | 1052 |
MS.gene018794.t1 | AT4G11610 | 61.845 | 802 | 279 | 8 | 1 | 798 | 96 | 874 | 0.0 | 1051 |
MS.gene018794.t1 | AT1G22610 | 58.407 | 791 | 317 | 4 | 9 | 798 | 250 | 1029 | 0.0 | 993 |
MS.gene018794.t1 | AT4G00700 | 56.767 | 761 | 317 | 7 | 43 | 798 | 253 | 1006 | 0.0 | 908 |
MS.gene018794.t1 | AT4G00700 | 56.767 | 761 | 317 | 7 | 43 | 798 | 253 | 1006 | 0.0 | 908 |
MS.gene018794.t1 | AT1G04150 | 54.064 | 812 | 325 | 14 | 5 | 798 | 231 | 1012 | 0.0 | 876 |
MS.gene018794.t1 | AT3G61300 | 53.141 | 796 | 327 | 16 | 10 | 798 | 216 | 972 | 0.0 | 872 |
MS.gene018794.t1 | AT4G20080 | 53.887 | 759 | 329 | 9 | 44 | 798 | 33 | 774 | 0.0 | 858 |
MS.gene018794.t1 | AT1G74720 | 50.127 | 786 | 351 | 13 | 36 | 798 | 314 | 1081 | 0.0 | 764 |
MS.gene018794.t1 | AT3G03680 | 49.483 | 774 | 336 | 15 | 50 | 798 | 274 | 1017 | 0.0 | 752 |
MS.gene018794.t1 | AT5G17980 | 47.507 | 762 | 363 | 14 | 48 | 798 | 314 | 1049 | 0.0 | 717 |
MS.gene018794.t1 | AT3G61720 | 37.272 | 821 | 452 | 19 | 12 | 798 | 4 | 795 | 1.74e-165 | 499 |
MS.gene018794.t1 | AT5G03435 | 37.657 | 794 | 427 | 24 | 12 | 793 | 4 | 741 | 5.33e-157 | 475 |
MS.gene018794.t1 | AT5G03435 | 40.304 | 593 | 308 | 16 | 12 | 598 | 4 | 556 | 5.83e-129 | 396 |
MS.gene018794.t1 | AT5G44760 | 44.068 | 413 | 172 | 12 | 15 | 421 | 5 | 364 | 1.80e-100 | 319 |
MS.gene018794.t1 | AT5G44760 | 35.766 | 137 | 39 | 1 | 564 | 700 | 364 | 451 | 2.19e-17 | 86.3 |
MS.gene018794.t1 | AT1G03370 | 31.707 | 123 | 80 | 3 | 59 | 180 | 3 | 122 | 4.02e-11 | 67.4 |
MS.gene018794.t1 | AT1G03370 | 31.707 | 123 | 80 | 3 | 59 | 180 | 3 | 122 | 5.90e-11 | 67.0 |
Find 147 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCGAAACTTTGGTATTTA+AGG | 0.059181 | 1.2:+39114340 | MS.gene018794:CDS |
GCACACATAATTTACCTTTA+TGG | 0.094538 | 1.2:+39115263 | MS.gene018794:CDS |
TTTCTCTACATGTTTCTTAT+TGG | 0.148826 | 1.2:+39115632 | MS.gene018794:CDS |
TCAGATTCAGCTTCAGTTAA+AGG | 0.151763 | 1.2:+39114279 | MS.gene018794:CDS |
ACATGTTTCTTATTGGAATA+TGG | 0.183866 | 1.2:+39115639 | MS.gene018794:CDS |
GTGTATTGTTCATTCCATTT+TGG | 0.239153 | 1.2:-39114987 | None:intergenic |
AAGATTGTTATTTCTGTTGC+TGG | 0.245800 | 1.2:+39115968 | MS.gene018794:CDS |
TTACTTGTTCTAAAACCTTC+TGG | 0.249201 | 1.2:+39115185 | MS.gene018794:CDS |
GGTATCTTAAACTATCTAAT+TGG | 0.260719 | 1.2:-39115334 | None:intergenic |
TGGATTTGGTGGCAATTCTT+TGG | 0.274389 | 1.2:-39113890 | None:intergenic |
TATCACATCTTGTGCCTTAG+AGG | 0.279796 | 1.2:-39115768 | None:intergenic |
GCGAAAACTTGCTTCCATTC+GGG | 0.282351 | 1.2:-39113997 | None:intergenic |
CACCTTAGAGTTTGTCTTGA+AGG | 0.286543 | 1.2:+39114738 | MS.gene018794:CDS |
ATTGTTGGTAGGATCAATTC+TGG | 0.294073 | 1.2:-39115608 | None:intergenic |
TCCGAAACTTTGGTATTTAA+GGG | 0.315843 | 1.2:+39114341 | MS.gene018794:CDS |
TAATCATCTGTGTTTGGCTT+TGG | 0.316111 | 1.2:-39113718 | None:intergenic |
CCTTGCACAGTCATAACTTT+TGG | 0.316380 | 1.2:+39115026 | MS.gene018794:CDS |
GGCTTCAAGCTTTGCTTAGT+TGG | 0.317783 | 1.2:+39115870 | MS.gene018794:CDS |
GTGTAATATCTATGAGTAAA+TGG | 0.321044 | 1.2:+39115507 | MS.gene018794:CDS |
ACCCTTAAATACCAAAGTTT+CGG | 0.329185 | 1.2:-39114342 | None:intergenic |
ACAGAAATAACAATCTTAAA+AGG | 0.330313 | 1.2:-39115962 | None:intergenic |
CCACATTGGATTCGGCGTTT+TGG | 0.333074 | 1.2:-39114475 | None:intergenic |
AGCTTGTAATCATCTGTGTT+TGG | 0.339723 | 1.2:-39113724 | None:intergenic |
ACGCTTCCTGTGACTGGATT+TGG | 0.340820 | 1.2:-39113904 | None:intergenic |
GCTTATTGTGTAGCAAAATA+TGG | 0.350897 | 1.2:+39114921 | MS.gene018794:CDS |
GAAGAGCAGAACCACCTCTT+AGG | 0.360465 | 1.2:+39115387 | MS.gene018794:CDS |
AACTCTTCATCTAGTTCATC+TGG | 0.366933 | 1.2:-39115731 | None:intergenic |
GGCTTAGGCATCCAAAGTTT+AGG | 0.369172 | 1.2:+39115999 | MS.gene018794:CDS |
TCGTTTATCAACTTTAGAAA+TGG | 0.370382 | 1.2:+39115136 | MS.gene018794:CDS |
CCAACTTTCACTTCAACATA+AGG | 0.378608 | 1.2:-39113931 | None:intergenic |
CGCGAAAACTTGCTTCCATT+CGG | 0.379563 | 1.2:-39113998 | None:intergenic |
GTGTTTGGCTTTGGAGCTGC+AGG | 0.385575 | 1.2:-39113709 | None:intergenic |
TGGTACAACGTTGAAAGATT+TGG | 0.387221 | 1.2:+39114660 | MS.gene018794:CDS |
TGCGGCGCCAAAGGACTATC+TGG | 0.389015 | 1.2:-39114147 | None:intergenic |
CTATCTGGTGGAACTCTTGT+TGG | 0.399768 | 1.2:-39114132 | None:intergenic |
CACCTTCAAGACAAACTCTA+AGG | 0.399784 | 1.2:-39114740 | None:intergenic |
GTAGCTAGAGATGATTATAT+TGG | 0.404183 | 1.2:+39114081 | MS.gene018794:CDS |
GATAGGCTTAGAAGTGTTGC+TGG | 0.406346 | 1.2:+39115803 | MS.gene018794:CDS |
CAACTTTGGAAGCAACCAAT+TGG | 0.407270 | 1.2:+39114822 | MS.gene018794:CDS |
TAGCAAAATATGGTATGAAA+TGG | 0.410325 | 1.2:+39114931 | MS.gene018794:CDS |
TTGGAGAACAAGGCGAGTCC+TGG | 0.415680 | 1.2:+39114555 | MS.gene018794:CDS |
GGAGGACAACGAGGCGGAAC+CGG | 0.416161 | 1.2:+39113787 | MS.gene018794:CDS |
TCTTCGTTCCACATTGGATT+CGG | 0.417173 | 1.2:-39114483 | None:intergenic |
GGCAACTTGCTCCTAAACTT+TGG | 0.423193 | 1.2:-39116010 | None:intergenic |
TCTAATTGGTTCACAGTGAA+TGG | 0.425729 | 1.2:-39115320 | None:intergenic |
GTGAAGTTATGTTAGCGGTT+TGG | 0.426325 | 1.2:+39114214 | MS.gene018794:CDS |
ACCAAGACACCCTCCACATA+TGG | 0.428256 | 1.2:+39115676 | MS.gene018794:CDS |
TGATAAGAATGAGGTATGAT+AGG | 0.433867 | 1.2:+39115786 | MS.gene018794:CDS |
TTGATGTGGATTCACATATA+TGG | 0.435933 | 1.2:+39115432 | MS.gene018794:CDS |
GGATCTACGCTTCCTGTGAC+TGG | 0.438103 | 1.2:-39113910 | None:intergenic |
AAGAAATTGCTTGGCACAGA+AGG | 0.441455 | 1.2:-39116031 | None:intergenic |
AGCAAAATATGGTATGAAAT+GGG | 0.446499 | 1.2:+39114932 | MS.gene018794:CDS |
GAAGCAAAGGGTGTCCATAA+AGG | 0.450881 | 1.2:-39115277 | None:intergenic |
AGATTGTTATTTCTGTTGCT+GGG | 0.455606 | 1.2:+39115969 | MS.gene018794:CDS |
TTTATGTTAATCCGAAACTT+TGG | 0.456350 | 1.2:+39114331 | MS.gene018794:CDS |
CCAACTTCAAGTATCCCAAT+TGG | 0.457472 | 1.2:-39114837 | None:intergenic |
TCCATATGTGGAGGGTGTCT+TGG | 0.467356 | 1.2:-39115677 | None:intergenic |
TTGTACCACCGCGAATGCAC+CGG | 0.472389 | 1.2:-39114645 | None:intergenic |
TTCTTCAAGAGGTTGCCATC+TGG | 0.472554 | 1.2:+39116049 | MS.gene018794:CDS |
GACAATTGTCATTTAGGTGG+TGG | 0.473245 | 1.2:+39115056 | MS.gene018794:CDS |
GCCACAACTTCGTCTTTCCC+AGG | 0.475763 | 1.2:-39114573 | None:intergenic |
ATCATCGCCCGGTGCATTCG+CGG | 0.476775 | 1.2:+39114637 | MS.gene018794:CDS |
ACATCTTGTGCCTTAGAGGT+TGG | 0.479165 | 1.2:-39115764 | None:intergenic |
GGACTTTCACCAATGAAAAC+AGG | 0.481943 | 1.2:+39114876 | MS.gene018794:CDS |
AACTTTGGAAGCAACCAATT+GGG | 0.484378 | 1.2:+39114823 | MS.gene018794:CDS |
TTCCAAAGTTGTCTAGCAGT+TGG | 0.485379 | 1.2:-39114810 | None:intergenic |
TCTTTCGCTGTAAAGCCAAC+CGG | 0.488325 | 1.2:-39113806 | None:intergenic |
AGTTCCACCAGATAGTCCTT+TGG | 0.489398 | 1.2:+39114140 | MS.gene018794:CDS |
ATGAACTTAAATTCTCAAGT+AGG | 0.491390 | 1.2:+39114712 | MS.gene018794:CDS |
TGAACTAGTATTGTTGTCAC+TGG | 0.493829 | 1.2:-39115557 | None:intergenic |
CGAAAACTTGCTTCCATTCG+GGG | 0.493876 | 1.2:-39113996 | None:intergenic |
GAATCTGAATGCCATGCCTC+AGG | 0.494847 | 1.2:-39114264 | None:intergenic |
CCTTATGTTGAAGTGAAAGT+TGG | 0.496099 | 1.2:+39113931 | MS.gene018794:CDS |
AACCTCTTGAAGAAATTGCT+TGG | 0.498226 | 1.2:-39116040 | None:intergenic |
GACCAACTGCTAGACAACTT+TGG | 0.501805 | 1.2:+39114808 | MS.gene018794:CDS |
TCAACAACTTCTTTCCTAAG+AGG | 0.501997 | 1.2:-39115401 | None:intergenic |
CCAATTGGGATACTTGAAGT+TGG | 0.502644 | 1.2:+39114837 | MS.gene018794:CDS |
CTGCTACAATGTTCATAGCT+TGG | 0.502811 | 1.2:-39115355 | None:intergenic |
TGCCAAGCAATTTCTTCAAG+AGG | 0.504743 | 1.2:+39116038 | MS.gene018794:CDS |
CTCGAATTTGTTCAACGGCA+AGG | 0.512907 | 1.2:-39114604 | None:intergenic |
AAGAGGTGAAGTTATGTTAG+CGG | 0.521890 | 1.2:+39114209 | MS.gene018794:CDS |
AACGTTGAAAGATTTGGTTT+CGG | 0.525078 | 1.2:+39114666 | MS.gene018794:CDS |
TGTACCACCGCGAATGCACC+GGG | 0.530409 | 1.2:-39114644 | None:intergenic |
AGTTATGTTAGCGGTTTGGA+TGG | 0.531133 | 1.2:+39114218 | MS.gene018794:CDS |
AGTTTACAATATTAGATCAA+AGG | 0.534131 | 1.2:+39114308 | MS.gene018794:CDS |
AAAGACACAAAGCCAGAGCT+AGG | 0.537262 | 1.2:+39113748 | MS.gene018794:CDS |
CGTTGAACAAATTCGAGACT+CGG | 0.538730 | 1.2:+39114610 | MS.gene018794:CDS |
CTATACCATTGCGGCGCCAA+AGG | 0.540068 | 1.2:-39114156 | None:intergenic |
CGTGCTGACGTTGGAGAACA+AGG | 0.541103 | 1.2:+39114545 | MS.gene018794:CDS |
AGAAAACCTCGTGCTGACGT+TGG | 0.541212 | 1.2:+39114536 | MS.gene018794:CDS |
TCAGCTTCAGTTAAAGGTGA+AGG | 0.543385 | 1.2:+39114285 | MS.gene018794:CDS |
TGTATCACTTATATACATTG+TGG | 0.546946 | 1.2:-39114784 | None:intergenic |
GCGCCGCAATGGTATAGACT+AGG | 0.547237 | 1.2:+39114162 | MS.gene018794:CDS |
CGCCGCAATGGTATAGACTA+GGG | 0.547437 | 1.2:+39114163 | MS.gene018794:CDS |
TTTGGTTTCGGCGTTCTCGA+AGG | 0.548524 | 1.2:+39114678 | MS.gene018794:CDS |
TGGAGAACAAGGCGAGTCCT+GGG | 0.553378 | 1.2:+39114556 | MS.gene018794:CDS |
GTTATGTTAGCGGTTTGGAT+GGG | 0.554019 | 1.2:+39114219 | MS.gene018794:CDS |
ACAAGATCTTCGTTCCACAT+TGG | 0.557915 | 1.2:-39114489 | None:intergenic |
AGAAGAAAACAAACCCCGAA+TGG | 0.558086 | 1.2:+39113983 | MS.gene018794:CDS |
CTTCCTGTGACTGGATTTGG+TGG | 0.560390 | 1.2:-39113901 | None:intergenic |
ATAGTCCTTTGGCGCCGCAA+TGG | 0.565983 | 1.2:+39114151 | MS.gene018794:CDS |
GTTGGAATATTGAGTGCTCA+AGG | 0.566308 | 1.2:+39114855 | MS.gene018794:CDS |
TTTGACAATTGTCATTTAGG+TGG | 0.567553 | 1.2:+39115053 | MS.gene018794:CDS |
GACTCGGATGGATCATCGCC+CGG | 0.570812 | 1.2:+39114626 | MS.gene018794:CDS |
ACAACTTCTTTCCTAAGAGG+TGG | 0.571006 | 1.2:-39115398 | None:intergenic |
GGCGTTCTCGAAGGTGACAA+AGG | 0.571970 | 1.2:+39114687 | MS.gene018794:CDS |
CCAAAAGTTATGACTGTGCA+AGG | 0.572940 | 1.2:-39115026 | None:intergenic |
TTGCCACCAAATCCAGTCAC+AGG | 0.577826 | 1.2:+39113898 | MS.gene018794:CDS |
CACAAGATGTGATAAGAATG+AGG | 0.578190 | 1.2:+39115777 | MS.gene018794:CDS |
GTGAAAGTTGGCAACTACAA+AGG | 0.587577 | 1.2:+39113943 | MS.gene018794:CDS |
GAACAAATTCGAGACTCGGA+TGG | 0.591471 | 1.2:+39114614 | MS.gene018794:CDS |
CTTCTGTCTTGTAACTGCTG+TGG | 0.594601 | 1.2:+39115925 | MS.gene018794:CDS |
CTTTGACAACGCGAACATAG+AGG | 0.595677 | 1.2:-39113867 | None:intergenic |
AAAGGTGAAACAAGAACAAG+AGG | 0.601357 | 1.2:+39114192 | MS.gene018794:CDS |
ATGAAGCGTTTCCTGAGGCA+TGG | 0.601952 | 1.2:+39114253 | MS.gene018794:CDS |
TGTTGAATACATGCTTGATG+TGG | 0.606283 | 1.2:+39115418 | MS.gene018794:CDS |
TATAGACTAGGGAATTTGAA+AGG | 0.609327 | 1.2:+39114174 | MS.gene018794:CDS |
CCAAAACGCCGAATCCAATG+TGG | 0.614361 | 1.2:+39114475 | MS.gene018794:CDS |
AAAGGAGAAGATACAATCAT+CGG | 0.615131 | 1.2:+39114026 | MS.gene018794:CDS |
TGTTCTCCAACGTCAGCACG+AGG | 0.616133 | 1.2:-39114542 | None:intergenic |
TCACCAATGAAAACAGGCAA+TGG | 0.618152 | 1.2:+39114882 | MS.gene018794:CDS |
CGAGTCTCGAATTTGTTCAA+CGG | 0.618223 | 1.2:-39114609 | None:intergenic |
GGCTTGGTGAGGTACAAAAG+TGG | 0.626019 | 1.2:+39115528 | MS.gene018794:CDS |
GACAACGAGGCGGAACCGGT+TGG | 0.626600 | 1.2:+39113791 | MS.gene018794:CDS |
AGCTGATGAAGCGTTTCCTG+AGG | 0.631444 | 1.2:+39114248 | MS.gene018794:CDS |
AACATTGTAGCAGTGAGGCT+AGG | 0.632784 | 1.2:+39115365 | MS.gene018794:CDS |
GGTGGAAATTCTCAACAAAG+TGG | 0.639010 | 1.2:+39115074 | MS.gene018794:CDS |
ATTTGTACGTGACAAAGAGA+TGG | 0.641223 | 1.2:+39114059 | MS.gene018794:CDS |
ATATCTATGAGTAAATGGCT+TGG | 0.643504 | 1.2:+39115512 | MS.gene018794:CDS |
AACGAGCACTTACGACCTTG+TGG | 0.643546 | 1.2:+39113831 | MS.gene018794:CDS |
TCCTGGGAAAGACGAAGTTG+TGG | 0.646078 | 1.2:+39114572 | MS.gene018794:CDS |
AGCATGCTATCAGCACCAGA+TGG | 0.646226 | 1.2:-39116064 | None:intergenic |
ATCGCCCGGTGCATTCGCGG+TGG | 0.657134 | 1.2:+39114640 | MS.gene018794:CDS |
TATGAGTAAATGGCTTGGTG+AGG | 0.658552 | 1.2:+39115517 | MS.gene018794:CDS |
ATATTGCAACTCAAGGTGAG+AGG | 0.658618 | 1.2:+39115849 | MS.gene018794:CDS |
GGAAGAATACAAACTGTGGT+TGG | 0.659627 | 1.2:+39115824 | MS.gene018794:CDS |
GTTGGTGATATTGCAACTCA+AGG | 0.661902 | 1.2:+39115842 | MS.gene018794:CDS |
TTCCCTAGTCTATACCATTG+CGG | 0.674872 | 1.2:-39114165 | None:intergenic |
AATGGAATGAACAATACACA+TGG | 0.675943 | 1.2:+39114991 | MS.gene018794:CDS |
CCGCCTCGTTGTCCTCCATG+TGG | 0.680531 | 1.2:-39113781 | None:intergenic |
GGCGCCAAAGGACTATCTGG+TGG | 0.683541 | 1.2:-39114144 | None:intergenic |
ATGGAATGAACAATACACAT+GGG | 0.694697 | 1.2:+39114992 | MS.gene018794:CDS |
TGGCCACATGGAGGACAACG+AGG | 0.696057 | 1.2:+39113778 | MS.gene018794:CDS |
CCACATGGAGGACAACGAGG+CGG | 0.699639 | 1.2:+39113781 | MS.gene018794:CDS |
CTATGAACATTGTAGCAGTG+AGG | 0.715518 | 1.2:+39115360 | MS.gene018794:CDS |
GGTAGAACATCTGTTCCACA+AGG | 0.716804 | 1.2:-39113846 | None:intergenic |
TGCTGGAAGAATACAAACTG+TGG | 0.747236 | 1.2:+39115820 | MS.gene018794:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAGAAATAACAATCTTAAA+AGG | - | chr1.2:39115965-39115984 | None:intergenic | 20.0% |
!! | AGTTTACAATATTAGATCAA+AGG | + | chr1.2:39114308-39114327 | MS.gene018794:CDS | 20.0% |
!! | ATATGGATACAAAAATTTCA+TGG | + | chr1.2:39115693-39115712 | MS.gene018794:CDS | 20.0% |
!! | TATGGATACAAAAATTTCAT+GGG | + | chr1.2:39115694-39115713 | MS.gene018794:CDS | 20.0% |
!!! | TTATTGGAATATGGAATTTT+AGG | + | chr1.2:39115648-39115667 | MS.gene018794:CDS | 20.0% |
! | AAAACTAACGATGCAAAAAT+TGG | + | chr1.2:39115101-39115120 | MS.gene018794:CDS | 25.0% |
! | AACATGTAGAGAAAAATTGT+TGG | - | chr1.2:39115626-39115645 | None:intergenic | 25.0% |
! | ACATGTTTCTTATTGGAATA+TGG | + | chr1.2:39115639-39115658 | MS.gene018794:CDS | 25.0% |
! | AGCAAAATATGGTATGAAAT+GGG | + | chr1.2:39114932-39114951 | MS.gene018794:CDS | 25.0% |
! | ATGAACTTAAATTCTCAAGT+AGG | + | chr1.2:39114712-39114731 | MS.gene018794:CDS | 25.0% |
! | GGTATCTTAAACTATCTAAT+TGG | - | chr1.2:39115337-39115356 | None:intergenic | 25.0% |
! | GTGTAATATCTATGAGTAAA+TGG | + | chr1.2:39115507-39115526 | MS.gene018794:CDS | 25.0% |
! | TAGCAAAATATGGTATGAAA+TGG | + | chr1.2:39114931-39114950 | MS.gene018794:CDS | 25.0% |
! | TGTATCACTTATATACATTG+TGG | - | chr1.2:39114787-39114806 | None:intergenic | 25.0% |
! | TTTATGTTAATCCGAAACTT+TGG | + | chr1.2:39114331-39114350 | MS.gene018794:CDS | 25.0% |
! | TTTCTCTACATGTTTCTTAT+TGG | + | chr1.2:39115632-39115651 | MS.gene018794:CDS | 25.0% |
!! | GAAATTTTTGTATCCATATG+TGG | - | chr1.2:39115692-39115711 | None:intergenic | 25.0% |
!! | TCGTTTATCAACTTTAGAAA+TGG | + | chr1.2:39115136-39115155 | MS.gene018794:CDS | 25.0% |
!!! | AATTTTTGCATCGTTAGTTT+TGG | - | chr1.2:39115102-39115121 | None:intergenic | 25.0% |
!!! | AGAATTGTTTCACTTTTTTC+AGG | + | chr1.2:39115485-39115504 | MS.gene018794:CDS | 25.0% |
!!! | GTTTTTGACAATTGTCATTT+AGG | + | chr1.2:39115050-39115069 | MS.gene018794:CDS | 25.0% |
AAAGGAGAAGATACAATCAT+CGG | + | chr1.2:39114026-39114045 | MS.gene018794:CDS | 30.0% | |
AATGGAATGAACAATACACA+TGG | + | chr1.2:39114991-39115010 | MS.gene018794:CDS | 30.0% | |
ACAAACAAAAATGTTGCTCT+TGG | - | chr1.2:39115902-39115921 | None:intergenic | 30.0% | |
ACCCTTAAATACCAAAGTTT+CGG | - | chr1.2:39114345-39114364 | None:intergenic | 30.0% | |
ACCTTCTGGATTGAAAAAAA+TGG | + | chr1.2:39115199-39115218 | MS.gene018794:CDS | 30.0% | |
ATATCTATGAGTAAATGGCT+TGG | + | chr1.2:39115512-39115531 | MS.gene018794:CDS | 30.0% | |
ATCCGAAACTTTGGTATTTA+AGG | + | chr1.2:39114340-39114359 | MS.gene018794:CDS | 30.0% | |
ATGGAATGAACAATACACAT+GGG | + | chr1.2:39114992-39115011 | MS.gene018794:CDS | 30.0% | |
CCTTCTGGATTGAAAAAAAT+GGG | + | chr1.2:39115200-39115219 | MS.gene018794:CDS | 30.0% | |
GCACACATAATTTACCTTTA+TGG | + | chr1.2:39115263-39115282 | MS.gene018794:CDS | 30.0% | |
GCTTATTGTGTAGCAAAATA+TGG | + | chr1.2:39114921-39114940 | MS.gene018794:CDS | 30.0% | |
GTAGCTAGAGATGATTATAT+TGG | + | chr1.2:39114081-39114100 | MS.gene018794:CDS | 30.0% | |
TATAGACTAGGGAATTTGAA+AGG | + | chr1.2:39114174-39114193 | MS.gene018794:CDS | 30.0% | |
TCCGAAACTTTGGTATTTAA+GGG | + | chr1.2:39114341-39114360 | MS.gene018794:CDS | 30.0% | |
TGATAAGAATGAGGTATGAT+AGG | + | chr1.2:39115786-39115805 | MS.gene018794:CDS | 30.0% | |
TGTAGAGAAAAATTGTTGGT+AGG | - | chr1.2:39115622-39115641 | None:intergenic | 30.0% | |
TTGATGTGGATTCACATATA+TGG | + | chr1.2:39115432-39115451 | MS.gene018794:CDS | 30.0% | |
! | AACGTTGAAAGATTTGGTTT+CGG | + | chr1.2:39114666-39114685 | MS.gene018794:CDS | 30.0% |
! | ATTTTTGTATCCATATGTGG+AGG | - | chr1.2:39115689-39115708 | None:intergenic | 30.0% |
! | GTGTATTGTTCATTCCATTT+TGG | - | chr1.2:39114990-39115009 | None:intergenic | 30.0% |
! | GTTTTTGTAAAAGCTCAAGT+TGG | + | chr1.2:39114420-39114439 | MS.gene018794:CDS | 30.0% |
! | TGAGCTTTTACAAAAACTTG+TGG | - | chr1.2:39114417-39114436 | None:intergenic | 30.0% |
! | TTTGACAATTGTCATTTAGG+TGG | + | chr1.2:39115053-39115072 | MS.gene018794:CDS | 30.0% |
! | TTTTTGTATCCATATGTGGA+GGG | - | chr1.2:39115688-39115707 | None:intergenic | 30.0% |
!! | AAGATTGTTATTTCTGTTGC+TGG | + | chr1.2:39115968-39115987 | MS.gene018794:CDS | 30.0% |
!! | AATGCATTTTTGGAAGCAAA+GGG | - | chr1.2:39115292-39115311 | None:intergenic | 30.0% |
!! | AGATTGTTATTTCTGTTGCT+GGG | + | chr1.2:39115969-39115988 | MS.gene018794:CDS | 30.0% |
!! | CTGAGAGTTTTAATCCAAAA+TGG | + | chr1.2:39114973-39114992 | MS.gene018794:CDS | 30.0% |
!! | TAATGCATTTTTGGAAGCAA+AGG | - | chr1.2:39115293-39115312 | None:intergenic | 30.0% |
!! | TTACTTGTTCTAAAACCTTC+TGG | + | chr1.2:39115185-39115204 | MS.gene018794:CDS | 30.0% |
!!! | GAAGGTTTTAGAACAAGTAA+TGG | - | chr1.2:39115185-39115204 | None:intergenic | 30.0% |
AAAGGTGAAACAAGAACAAG+AGG | + | chr1.2:39114192-39114211 | MS.gene018794:CDS | 35.0% | |
AACCTCTTGAAGAAATTGCT+TGG | - | chr1.2:39116043-39116062 | None:intergenic | 35.0% | |
AAGAGGTGAAGTTATGTTAG+CGG | + | chr1.2:39114209-39114228 | MS.gene018794:CDS | 35.0% | |
AGCTTGTAATCATCTGTGTT+TGG | - | chr1.2:39113727-39113746 | None:intergenic | 35.0% | |
ATTTGTACGTGACAAAGAGA+TGG | + | chr1.2:39114059-39114078 | MS.gene018794:CDS | 35.0% | |
CACAAGATGTGATAAGAATG+AGG | + | chr1.2:39115777-39115796 | MS.gene018794:CDS | 35.0% | |
CCAACTTTCACTTCAACATA+AGG | - | chr1.2:39113934-39113953 | None:intergenic | 35.0% | |
CCTTATGTTGAAGTGAAAGT+TGG | + | chr1.2:39113931-39113950 | MS.gene018794:CDS | 35.0% | |
TCAACAACTTCTTTCCTAAG+AGG | - | chr1.2:39115404-39115423 | None:intergenic | 35.0% | |
TCAGATTCAGCTTCAGTTAA+AGG | + | chr1.2:39114279-39114298 | MS.gene018794:CDS | 35.0% | |
TGAACTAGTATTGTTGTCAC+TGG | - | chr1.2:39115560-39115579 | None:intergenic | 35.0% | |
TGGTACAACGTTGAAAGATT+TGG | + | chr1.2:39114660-39114679 | MS.gene018794:CDS | 35.0% | |
TGTTGAATACATGCTTGATG+TGG | + | chr1.2:39115418-39115437 | MS.gene018794:CDS | 35.0% | |
TTACAAAAACTTGTGGTGGT+TGG | - | chr1.2:39114410-39114429 | None:intergenic | 35.0% | |
! | AACTCTTCATCTAGTTCATC+TGG | - | chr1.2:39115734-39115753 | None:intergenic | 35.0% |
! | AACTTTGGAAGCAACCAATT+GGG | + | chr1.2:39114823-39114842 | MS.gene018794:CDS | 35.0% |
! | ATTGTTGGTAGGATCAATTC+TGG | - | chr1.2:39115611-39115630 | None:intergenic | 35.0% |
! | GCTTTTACAAAAACTTGTGG+TGG | - | chr1.2:39114414-39114433 | None:intergenic | 35.0% |
! | GGATGCAAGTAATGCATTTT+TGG | - | chr1.2:39115302-39115321 | None:intergenic | 35.0% |
! | TAATCATCTGTGTTTGGCTT+TGG | - | chr1.2:39113721-39113740 | None:intergenic | 35.0% |
! | TCTAATTGGTTCACAGTGAA+TGG | - | chr1.2:39115323-39115342 | None:intergenic | 35.0% |
! | TGATACTTTTCCAACCTCTA+AGG | + | chr1.2:39115754-39115773 | MS.gene018794:CDS | 35.0% |
! | TTACCATTGCCTGTTTTCAT+TGG | - | chr1.2:39114888-39114907 | None:intergenic | 35.0% |
!!! | CCCATTTTTTTCAATCCAGA+AGG | - | chr1.2:39115203-39115222 | None:intergenic | 35.0% |
AAGAAATTGCTTGGCACAGA+AGG | - | chr1.2:39116034-39116053 | None:intergenic | 40.0% | |
ACAACTTCTTTCCTAAGAGG+TGG | - | chr1.2:39115401-39115420 | None:intergenic | 40.0% | |
ACAAGATCTTCGTTCCACAT+TGG | - | chr1.2:39114492-39114511 | None:intergenic | 40.0% | |
AGAAGAAAACAAACCCCGAA+TGG | + | chr1.2:39113983-39114002 | MS.gene018794:CDS | 40.0% | |
ATATTGCAACTCAAGGTGAG+AGG | + | chr1.2:39115849-39115868 | MS.gene018794:CDS | 40.0% | |
CACCTTAGAGTTTGTCTTGA+AGG | + | chr1.2:39114738-39114757 | MS.gene018794:CDS | 40.0% | |
CACCTTCAAGACAAACTCTA+AGG | - | chr1.2:39114743-39114762 | None:intergenic | 40.0% | |
CCAAAAGTTATGACTGTGCA+AGG | - | chr1.2:39115029-39115048 | None:intergenic | 40.0% | |
CCAACTTCAAGTATCCCAAT+TGG | - | chr1.2:39114840-39114859 | None:intergenic | 40.0% | |
CCAATTGGGATACTTGAAGT+TGG | + | chr1.2:39114837-39114856 | MS.gene018794:CDS | 40.0% | |
CGTTGAACAAATTCGAGACT+CGG | + | chr1.2:39114610-39114629 | MS.gene018794:CDS | 40.0% | |
CTATGAACATTGTAGCAGTG+AGG | + | chr1.2:39115360-39115379 | MS.gene018794:CDS | 40.0% | |
CTGCTACAATGTTCATAGCT+TGG | - | chr1.2:39115358-39115377 | None:intergenic | 40.0% | |
GGAAGAATACAAACTGTGGT+TGG | + | chr1.2:39115824-39115843 | MS.gene018794:CDS | 40.0% | |
GGACTTTCACCAATGAAAAC+AGG | + | chr1.2:39114876-39114895 | MS.gene018794:CDS | 40.0% | |
GGTGGAAATTCTCAACAAAG+TGG | + | chr1.2:39115074-39115093 | MS.gene018794:CDS | 40.0% | |
GTGAAAGTTGGCAACTACAA+AGG | + | chr1.2:39113943-39113962 | MS.gene018794:CDS | 40.0% | |
GTGAAGTTATGTTAGCGGTT+TGG | + | chr1.2:39114214-39114233 | MS.gene018794:CDS | 40.0% | |
GTTGGAATATTGAGTGCTCA+AGG | + | chr1.2:39114855-39114874 | MS.gene018794:CDS | 40.0% | |
TATCACATCTTGTGCCTTAG+AGG | - | chr1.2:39115771-39115790 | None:intergenic | 40.0% | |
TCACCAATGAAAACAGGCAA+TGG | + | chr1.2:39114882-39114901 | MS.gene018794:CDS | 40.0% | |
TCAGCTTCAGTTAAAGGTGA+AGG | + | chr1.2:39114285-39114304 | MS.gene018794:CDS | 40.0% | |
TCTTCGTTCCACATTGGATT+CGG | - | chr1.2:39114486-39114505 | None:intergenic | 40.0% | |
TGCCAAGCAATTTCTTCAAG+AGG | + | chr1.2:39116038-39116057 | MS.gene018794:CDS | 40.0% | |
TGCTGGAAGAATACAAACTG+TGG | + | chr1.2:39115820-39115839 | MS.gene018794:CDS | 40.0% | |
TTCCAAAGTTGTCTAGCAGT+TGG | - | chr1.2:39114813-39114832 | None:intergenic | 40.0% | |
TTCCCTAGTCTATACCATTG+CGG | - | chr1.2:39114168-39114187 | None:intergenic | 40.0% | |
! | AGTTATGTTAGCGGTTTGGA+TGG | + | chr1.2:39114218-39114237 | MS.gene018794:CDS | 40.0% |
! | CAACTTTGGAAGCAACCAAT+TGG | + | chr1.2:39114822-39114841 | MS.gene018794:CDS | 40.0% |
! | CCTTGCACAGTCATAACTTT+TGG | + | chr1.2:39115026-39115045 | MS.gene018794:CDS | 40.0% |
! | CGAGTCTCGAATTTGTTCAA+CGG | - | chr1.2:39114612-39114631 | None:intergenic | 40.0% |
! | GACAATTGTCATTTAGGTGG+TGG | + | chr1.2:39115056-39115075 | MS.gene018794:CDS | 40.0% |
! | GTTATGTTAGCGGTTTGGAT+GGG | + | chr1.2:39114219-39114238 | MS.gene018794:CDS | 40.0% |
! | TTTCTGTTGCTGGGATTTTC+TGG | + | chr1.2:39115978-39115997 | MS.gene018794:CDS | 40.0% |
!! | GTTGGTGATATTGCAACTCA+AGG | + | chr1.2:39115842-39115861 | MS.gene018794:CDS | 40.0% |
!! | TATGAGTAAATGGCTTGGTG+AGG | + | chr1.2:39115517-39115536 | MS.gene018794:CDS | 40.0% |
!! | TGGATTTGGTGGCAATTCTT+TGG | - | chr1.2:39113893-39113912 | None:intergenic | 40.0% |
AAAGACACAAAGCCAGAGCT+AGG | + | chr1.2:39113748-39113767 | MS.gene018794:CDS | 45.0% | |
AACATTGTAGCAGTGAGGCT+AGG | + | chr1.2:39115365-39115384 | MS.gene018794:CDS | 45.0% | |
ACATCTTGTGCCTTAGAGGT+TGG | - | chr1.2:39115767-39115786 | None:intergenic | 45.0% | |
AGCCAGAGCTAGGAGAAAAA+TGG | + | chr1.2:39113758-39113777 | MS.gene018794:CDS | 45.0% | |
AGTTCCACCAGATAGTCCTT+TGG | + | chr1.2:39114140-39114159 | MS.gene018794:CDS | 45.0% | |
CTAGGAGAAAAATGGCCACA+TGG | + | chr1.2:39113766-39113785 | MS.gene018794:CDS | 45.0% | |
CTATCTGGTGGAACTCTTGT+TGG | - | chr1.2:39114135-39114154 | None:intergenic | 45.0% | |
CTTCTGTCTTGTAACTGCTG+TGG | + | chr1.2:39115925-39115944 | MS.gene018794:CDS | 45.0% | |
CTTTGACAACGCGAACATAG+AGG | - | chr1.2:39113870-39113889 | None:intergenic | 45.0% | |
GAACAAATTCGAGACTCGGA+TGG | + | chr1.2:39114614-39114633 | MS.gene018794:CDS | 45.0% | |
GACCAACTGCTAGACAACTT+TGG | + | chr1.2:39114808-39114827 | MS.gene018794:CDS | 45.0% | |
GGCTTAGGCATCCAAAGTTT+AGG | + | chr1.2:39115999-39116018 | MS.gene018794:CDS | 45.0% | |
GGCTTCAAGCTTTGCTTAGT+TGG | + | chr1.2:39115870-39115889 | MS.gene018794:CDS | 45.0% | |
GGTAGAACATCTGTTCCACA+AGG | - | chr1.2:39113849-39113868 | None:intergenic | 45.0% | |
TCTTTCGCTGTAAAGCCAAC+CGG | - | chr1.2:39113809-39113828 | None:intergenic | 45.0% | |
TTCTTCAAGAGGTTGCCATC+TGG | + | chr1.2:39116049-39116068 | MS.gene018794:CDS | 45.0% | |
! | AGCACGAGGTTTTCTTCGAA+CGG | - | chr1.2:39114531-39114550 | None:intergenic | 45.0% |
! | CGAAAACTTGCTTCCATTCG+GGG | - | chr1.2:39113999-39114018 | None:intergenic | 45.0% |
! | CGCGAAAACTTGCTTCCATT+CGG | - | chr1.2:39114001-39114020 | None:intergenic | 45.0% |
! | CTCGAATTTGTTCAACGGCA+AGG | - | chr1.2:39114607-39114626 | None:intergenic | 45.0% |
! | GCAAGTTTTCGCGTTCTCAA+AGG | + | chr1.2:39114008-39114027 | MS.gene018794:CDS | 45.0% |
! | GCGAAAACTTGCTTCCATTC+GGG | - | chr1.2:39114000-39114019 | None:intergenic | 45.0% |
! | GGCAACTTGCTCCTAAACTT+TGG | - | chr1.2:39116013-39116032 | None:intergenic | 45.0% |
!! | ATTGGATTCGGCGTTTTGGT+CGG | - | chr1.2:39114474-39114493 | None:intergenic | 45.0% |
!! | GAAGCAAAGGGTGTCCATAA+AGG | - | chr1.2:39115280-39115299 | None:intergenic | 45.0% |
!! | GATAGGCTTAGAAGTGTTGC+TGG | + | chr1.2:39115803-39115822 | MS.gene018794:CDS | 45.0% |
!!! | GGTGGTTGGCTTTTATCATG+TGG | - | chr1.2:39114396-39114415 | None:intergenic | 45.0% |
!!! | TTGCTGGGATTTTCTGGCTT+AGG | + | chr1.2:39115984-39116003 | MS.gene018794:CDS | 45.0% |
AACGAGCACTTACGACCTTG+TGG | + | chr1.2:39113831-39113850 | MS.gene018794:CDS | 50.0% | |
ACCAAGACACCCTCCACATA+TGG | + | chr1.2:39115676-39115695 | MS.gene018794:CDS | 50.0% | |
ACGCTTCCTGTGACTGGATT+TGG | - | chr1.2:39113907-39113926 | None:intergenic | 50.0% | |
AGCATGCTATCAGCACCAGA+TGG | - | chr1.2:39116067-39116086 | None:intergenic | 50.0% | |
CCAAAACGCCGAATCCAATG+TGG | + | chr1.2:39114475-39114494 | MS.gene018794:CDS | 50.0% | |
CGCCGCAATGGTATAGACTA+GGG | + | chr1.2:39114163-39114182 | MS.gene018794:CDS | 50.0% | |
CTTCCTGTGACTGGATTTGG+TGG | - | chr1.2:39113904-39113923 | None:intergenic | 50.0% | |
GAAGAGCAGAACCACCTCTT+AGG | + | chr1.2:39115387-39115406 | MS.gene018794:CDS | 50.0% | |
GAATCTGAATGCCATGCCTC+AGG | - | chr1.2:39114267-39114286 | None:intergenic | 50.0% | |
GGAGAAAAATGGCCACATGG+AGG | + | chr1.2:39113769-39113788 | MS.gene018794:CDS | 50.0% | |
TCCTGGGAAAGACGAAGTTG+TGG | + | chr1.2:39114572-39114591 | MS.gene018794:CDS | 50.0% | |
TTGCCACCAAATCCAGTCAC+AGG | + | chr1.2:39113898-39113917 | MS.gene018794:CDS | 50.0% | |
! | AGAAAACCTCGTGCTGACGT+TGG | + | chr1.2:39114536-39114555 | MS.gene018794:CDS | 50.0% |
! | AGCTGATGAAGCGTTTCCTG+AGG | + | chr1.2:39114248-39114267 | MS.gene018794:CDS | 50.0% |
! | ATGAAGCGTTTCCTGAGGCA+TGG | + | chr1.2:39114253-39114272 | MS.gene018794:CDS | 50.0% |
! | CCACATTGGATTCGGCGTTT+TGG | - | chr1.2:39114478-39114497 | None:intergenic | 50.0% |
! | TTTGGTTTCGGCGTTCTCGA+AGG | + | chr1.2:39114678-39114697 | MS.gene018794:CDS | 50.0% |
!! | GGCTTGGTGAGGTACAAAAG+TGG | + | chr1.2:39115528-39115547 | MS.gene018794:CDS | 50.0% |
!! | TCCATATGTGGAGGGTGTCT+TGG | - | chr1.2:39115680-39115699 | None:intergenic | 50.0% |
!!! | GGCCATTTTTCTCCTAGCTC+TGG | - | chr1.2:39113763-39113782 | None:intergenic | 50.0% |
ATAGTCCTTTGGCGCCGCAA+TGG | + | chr1.2:39114151-39114170 | MS.gene018794:CDS | 55.0% | |
CTATACCATTGCGGCGCCAA+AGG | - | chr1.2:39114159-39114178 | None:intergenic | 55.0% | |
GCCACAACTTCGTCTTTCCC+AGG | - | chr1.2:39114576-39114595 | None:intergenic | 55.0% | |
GCGCCGCAATGGTATAGACT+AGG | + | chr1.2:39114162-39114181 | MS.gene018794:CDS | 55.0% | |
GGATCTACGCTTCCTGTGAC+TGG | - | chr1.2:39113913-39113932 | None:intergenic | 55.0% | |
GGCGTTCTCGAAGGTGACAA+AGG | + | chr1.2:39114687-39114706 | MS.gene018794:CDS | 55.0% | |
TGGAGAACAAGGCGAGTCCT+GGG | + | chr1.2:39114556-39114575 | MS.gene018794:CDS | 55.0% | |
TGTTCTCCAACGTCAGCACG+AGG | - | chr1.2:39114545-39114564 | None:intergenic | 55.0% | |
TTGGAGAACAAGGCGAGTCC+TGG | + | chr1.2:39114555-39114574 | MS.gene018794:CDS | 55.0% | |
TTGTACCACCGCGAATGCAC+CGG | - | chr1.2:39114648-39114667 | None:intergenic | 55.0% | |
! | CGTGCTGACGTTGGAGAACA+AGG | + | chr1.2:39114545-39114564 | MS.gene018794:CDS | 55.0% |
!! | GTGTTTGGCTTTGGAGCTGC+AGG | - | chr1.2:39113712-39113731 | None:intergenic | 55.0% |
ATCATCGCCCGGTGCATTCG+CGG | + | chr1.2:39114637-39114656 | MS.gene018794:CDS | 60.0% | |
CCACATGGAGGACAACGAGG+CGG | + | chr1.2:39113781-39113800 | MS.gene018794:CDS | 60.0% | |
GACTCGGATGGATCATCGCC+CGG | + | chr1.2:39114626-39114645 | MS.gene018794:CDS | 60.0% | |
GGCGCCAAAGGACTATCTGG+TGG | - | chr1.2:39114147-39114166 | None:intergenic | 60.0% | |
TGCGGCGCCAAAGGACTATC+TGG | - | chr1.2:39114150-39114169 | None:intergenic | 60.0% | |
TGGCCACATGGAGGACAACG+AGG | + | chr1.2:39113778-39113797 | MS.gene018794:CDS | 60.0% | |
TGTACCACCGCGAATGCACC+GGG | - | chr1.2:39114647-39114666 | None:intergenic | 60.0% | |
CCGCCTCGTTGTCCTCCATG+TGG | - | chr1.2:39113784-39113803 | None:intergenic | 65.0% | |
GACAACGAGGCGGAACCGGT+TGG | + | chr1.2:39113791-39113810 | MS.gene018794:CDS | 65.0% | |
GGAGGACAACGAGGCGGAAC+CGG | + | chr1.2:39113787-39113806 | MS.gene018794:CDS | 65.0% | |
ATCGCCCGGTGCATTCGCGG+TGG | + | chr1.2:39114640-39114659 | MS.gene018794:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 39113694 | 39116090 | 39113694 | ID=MS.gene018794 |
chr1.2 | mRNA | 39113694 | 39116090 | 39113694 | ID=MS.gene018794.t1;Parent=MS.gene018794 |
chr1.2 | exon | 39113694 | 39116090 | 39113694 | ID=MS.gene018794.t1.exon1;Parent=MS.gene018794.t1 |
chr1.2 | CDS | 39113694 | 39116090 | 39113694 | ID=cds.MS.gene018794.t1;Parent=MS.gene018794.t1 |
Gene Sequence |
Protein sequence |