Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056344.t1 | XP_013456240.1 | 99.2 | 770 | 6 | 0 | 1 | 770 | 1 | 770 | 0.00E+00 | 1558.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056344.t1 | Q9M2R0 | 80.7 | 774 | 144 | 3 | 1 | 770 | 1 | 773 | 0.0e+00 | 1315.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056344.t1 | A0A072ULK6 | 99.2 | 770 | 6 | 0 | 1 | 770 | 1 | 770 | 0.0e+00 | 1558.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056344 | MS.gene84943 | PPI |
| MS.gene056344 | MS.gene04595 | PPI |
| MS.gene056344 | MS.gene018791 | PPI |
| MS.gene056344 | MS.gene97681 | PPI |
| MS.gene056344 | MS.gene072379 | PPI |
| MS.gene97685 | MS.gene056344 | PPI |
| MS.gene056344 | MS.gene90010 | PPI |
| MS.gene056344 | MS.gene017959 | PPI |
| MS.gene056344 | MS.gene018794 | PPI |
| MS.gene056344 | MS.gene84949 | PPI |
| MS.gene90013 | MS.gene056344 | PPI |
| MS.gene056972 | MS.gene056344 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056344.t1 | MTR_4g066150 | 99.221 | 770 | 6 | 0 | 1 | 770 | 1 | 770 | 0.0 | 1589 |
| MS.gene056344.t1 | MTR_7g092770 | 81.596 | 777 | 134 | 7 | 1 | 770 | 1 | 775 | 0.0 | 1337 |
| MS.gene056344.t1 | MTR_0305s0020 | 82.194 | 775 | 132 | 4 | 1 | 770 | 1 | 774 | 0.0 | 1333 |
| MS.gene056344.t1 | MTR_5g010390 | 67.141 | 773 | 243 | 4 | 9 | 770 | 235 | 1007 | 0.0 | 1134 |
| MS.gene056344.t1 | MTR_3g027150 | 65.539 | 798 | 246 | 7 | 2 | 770 | 25 | 822 | 0.0 | 1120 |
| MS.gene056344.t1 | MTR_4g023460 | 66.963 | 787 | 238 | 8 | 6 | 770 | 356 | 1142 | 0.0 | 1107 |
| MS.gene056344.t1 | MTR_0291s0010 | 64.848 | 788 | 255 | 6 | 5 | 770 | 10 | 797 | 0.0 | 1096 |
| MS.gene056344.t1 | MTR_4g033215 | 64.524 | 778 | 267 | 6 | 1 | 770 | 268 | 1044 | 0.0 | 1054 |
| MS.gene056344.t1 | MTR_8g031270 | 60.000 | 775 | 293 | 7 | 9 | 770 | 233 | 1003 | 0.0 | 999 |
| MS.gene056344.t1 | MTR_7g076900 | 60.000 | 785 | 285 | 7 | 9 | 770 | 235 | 1013 | 0.0 | 989 |
| MS.gene056344.t1 | MTR_4g057675 | 56.812 | 778 | 312 | 9 | 8 | 770 | 15 | 783 | 0.0 | 866 |
| MS.gene056344.t1 | MTR_4g071870 | 54.209 | 784 | 300 | 11 | 2 | 770 | 10 | 749 | 0.0 | 827 |
| MS.gene056344.t1 | MTR_4g107850 | 52.231 | 762 | 314 | 15 | 33 | 770 | 303 | 1038 | 0.0 | 785 |
| MS.gene056344.t1 | MTR_6g027540 | 50.197 | 761 | 335 | 14 | 31 | 770 | 272 | 1009 | 0.0 | 755 |
| MS.gene056344.t1 | MTR_6g028050 | 49.277 | 761 | 347 | 13 | 31 | 770 | 284 | 1026 | 0.0 | 746 |
| MS.gene056344.t1 | MTR_1g015540 | 48.214 | 784 | 373 | 13 | 7 | 770 | 3 | 773 | 0.0 | 701 |
| MS.gene056344.t1 | MTR_5g096980 | 40.077 | 781 | 425 | 12 | 9 | 770 | 7 | 763 | 0.0 | 587 |
| MS.gene056344.t1 | MTR_4g023250 | 64.615 | 130 | 44 | 1 | 640 | 769 | 1 | 128 | 1.57e-52 | 178 |
| MS.gene056344.t1 | MTR_4g023230 | 50.820 | 122 | 45 | 1 | 557 | 678 | 49 | 155 | 2.34e-32 | 123 |
| MS.gene056344.t1 | MTR_4g023390 | 48.544 | 103 | 31 | 2 | 644 | 746 | 17 | 97 | 1.76e-22 | 92.8 |
| MS.gene056344.t1 | MTR_4g023240 | 63.333 | 60 | 22 | 0 | 491 | 550 | 10 | 69 | 5.76e-19 | 82.0 |
| MS.gene056344.t1 | MTR_7g052280 | 50.633 | 79 | 13 | 4 | 248 | 324 | 1 | 55 | 4.17e-14 | 67.8 |
| MS.gene056344.t1 | MTR_2g027360 | 31.250 | 128 | 77 | 3 | 42 | 163 | 3 | 125 | 9.54e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056344.t1 | AT3G57880 | 80.749 | 774 | 144 | 3 | 1 | 770 | 1 | 773 | 0.0 | 1340 |
| MS.gene056344.t1 | AT3G57880 | 80.749 | 774 | 144 | 3 | 1 | 770 | 1 | 773 | 0.0 | 1340 |
| MS.gene056344.t1 | AT3G57880 | 80.749 | 774 | 144 | 3 | 1 | 770 | 1 | 773 | 0.0 | 1340 |
| MS.gene056344.t1 | AT3G57880 | 80.749 | 774 | 144 | 3 | 1 | 770 | 1 | 773 | 0.0 | 1340 |
| MS.gene056344.t1 | AT5G12970 | 81.818 | 770 | 139 | 1 | 1 | 770 | 1 | 769 | 0.0 | 1317 |
| MS.gene056344.t1 | AT1G51570 | 78.636 | 777 | 158 | 5 | 1 | 770 | 1 | 776 | 0.0 | 1296 |
| MS.gene056344.t1 | AT4G11610 | 65.977 | 773 | 251 | 5 | 9 | 770 | 240 | 1011 | 0.0 | 1120 |
| MS.gene056344.t1 | AT4G11610 | 65.977 | 773 | 251 | 5 | 9 | 770 | 236 | 1007 | 0.0 | 1120 |
| MS.gene056344.t1 | AT4G11610 | 65.977 | 773 | 251 | 5 | 9 | 770 | 103 | 874 | 0.0 | 1120 |
| MS.gene056344.t1 | AT5G06850 | 65.776 | 786 | 248 | 6 | 6 | 770 | 9 | 794 | 0.0 | 1113 |
| MS.gene056344.t1 | AT5G48060 | 65.240 | 771 | 252 | 6 | 12 | 770 | 270 | 1036 | 0.0 | 1090 |
| MS.gene056344.t1 | AT1G22610 | 64.541 | 784 | 263 | 7 | 1 | 770 | 247 | 1029 | 0.0 | 1061 |
| MS.gene056344.t1 | AT4G00700 | 58.015 | 786 | 309 | 8 | 2 | 770 | 225 | 1006 | 0.0 | 957 |
| MS.gene056344.t1 | AT4G00700 | 58.015 | 786 | 309 | 8 | 2 | 770 | 225 | 1006 | 0.0 | 957 |
| MS.gene056344.t1 | AT1G04150 | 57.741 | 788 | 297 | 11 | 6 | 770 | 238 | 1012 | 0.0 | 925 |
| MS.gene056344.t1 | AT4G20080 | 58.312 | 770 | 302 | 11 | 10 | 770 | 15 | 774 | 0.0 | 920 |
| MS.gene056344.t1 | AT3G61300 | 55.886 | 773 | 317 | 12 | 5 | 770 | 217 | 972 | 0.0 | 911 |
| MS.gene056344.t1 | AT1G74720 | 50.250 | 800 | 352 | 16 | 2 | 770 | 297 | 1081 | 0.0 | 796 |
| MS.gene056344.t1 | AT3G03680 | 49.871 | 778 | 337 | 17 | 23 | 770 | 263 | 1017 | 0.0 | 756 |
| MS.gene056344.t1 | AT5G17980 | 49.602 | 754 | 348 | 14 | 31 | 770 | 314 | 1049 | 0.0 | 754 |
| MS.gene056344.t1 | AT3G61720 | 37.961 | 814 | 434 | 22 | 6 | 770 | 4 | 795 | 4.54e-165 | 497 |
| MS.gene056344.t1 | AT5G03435 | 40.362 | 773 | 409 | 23 | 6 | 763 | 4 | 739 | 1.54e-163 | 491 |
| MS.gene056344.t1 | AT5G03435 | 42.683 | 574 | 299 | 15 | 6 | 570 | 4 | 556 | 1.59e-138 | 420 |
| MS.gene056344.t1 | AT5G44760 | 49.875 | 399 | 155 | 9 | 8 | 399 | 4 | 364 | 4.84e-120 | 370 |
| MS.gene056344.t1 | AT5G44760 | 22.394 | 518 | 274 | 16 | 190 | 672 | 27 | 451 | 2.44e-20 | 95.5 |
| MS.gene056344.t1 | AT1G03370 | 32.787 | 122 | 78 | 2 | 42 | 161 | 3 | 122 | 1.13e-11 | 68.9 |
| MS.gene056344.t1 | AT1G03370 | 32.787 | 122 | 78 | 2 | 42 | 161 | 3 | 122 | 1.18e-11 | 68.9 |
Find 188 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTATCCTACTTGCAAATT+TGG | 0.128416 | 4.1:-34753996 | None:intergenic |
| CTCATTCCATATAGGATTTA+TGG | 0.161420 | 4.1:-34753768 | None:intergenic |
| GTTTGATCGCTTTCGGAAAA+TGG | 0.180986 | 4.1:+34754767 | MS.gene056344:CDS |
| TTTCATTATTCTGAAGAAAT+TGG | 0.197860 | 4.1:-34754734 | None:intergenic |
| TTGCAAGTAGGATACATTTA+AGG | 0.226990 | 4.1:+34754002 | MS.gene056344:CDS |
| TCATATCCTATTCATAATAT+TGG | 0.235720 | 4.1:+34754837 | MS.gene056344:CDS |
| AGGGCAAACTCATGAGAATT+TGG | 0.271982 | 4.1:-34753050 | None:intergenic |
| TTCTCATGAGTTTGCCCTTA+AGG | 0.273893 | 4.1:+34753055 | MS.gene056344:CDS |
| CAGTTCCTCTTAATTTCTTT+AGG | 0.274083 | 4.1:+34755295 | MS.gene056344:CDS |
| TCGGATCCAGGCTTCTGTTT+TGG | 0.277864 | 4.1:+34753325 | MS.gene056344:CDS |
| ACATGTTCATGATTGGAATA+TGG | 0.280190 | 4.1:+34754899 | MS.gene056344:CDS |
| ATGAGGCATTTCCTGATTCT+TGG | 0.294072 | 4.1:+34753540 | MS.gene056344:CDS |
| TTGGAATATGGAACTTTAGA+TGG | 0.319453 | 4.1:+34754911 | MS.gene056344:CDS |
| CTCCCAAGCTTTGGTATGTC+AGG | 0.329807 | 4.1:+34753627 | MS.gene056344:CDS |
| TGAAGACCATAAATCCTATA+TGG | 0.331183 | 4.1:+34753762 | MS.gene056344:CDS |
| TTCTTATACATGTTCATGAT+TGG | 0.336283 | 4.1:+34754892 | MS.gene056344:CDS |
| GATACATTTAAGGTTATGTT+TGG | 0.339818 | 4.1:+34754012 | MS.gene056344:CDS |
| GAATGAGATACGATCGATTA+AGG | 0.340105 | 4.1:+34755052 | MS.gene056344:CDS |
| ACCTAGTGTTCACCGGCTTA+TGG | 0.344461 | 4.1:-34753925 | None:intergenic |
| ATTGTTGGAAGTATTAGTTC+AGG | 0.346883 | 4.1:-34754868 | None:intergenic |
| GGATAGGGAAGGTAAGAATT+AGG | 0.349936 | 4.1:+34754377 | MS.gene056344:CDS |
| TGTTCGGCGTTGTCTCCTTA+AGG | 0.365819 | 4.1:-34753070 | None:intergenic |
| TTATCGAGTTTGATCGCTTT+CGG | 0.366151 | 4.1:+34754760 | MS.gene056344:CDS |
| TGTGGAGCCAAAGGGCTATC+TGG | 0.367731 | 4.1:-34753437 | None:intergenic |
| GAGAGTTAATGCTTGCAGTT+TGG | 0.375142 | 4.1:+34753501 | MS.gene056344:CDS |
| GGGAGAGTTCAAAGTGTTAT+AGG | 0.375992 | 4.1:+34755084 | MS.gene056344:CDS |
| CTTTGGCTCCACAATGGTAT+AGG | 0.376988 | 4.1:+34753447 | MS.gene056344:CDS |
| TGAATTAGTATCGATGTAAT+CGG | 0.380138 | 4.1:-34754817 | None:intergenic |
| CCATCTACTGTTATCACAAT+AGG | 0.380739 | 4.1:+34754304 | MS.gene056344:CDS |
| GTTATAGCAGATGACTTTGT+AGG | 0.383168 | 4.1:+34753371 | MS.gene056344:CDS |
| TGATTCAGCTCGATCATCTA+AGG | 0.384216 | 4.1:+34754590 | MS.gene056344:CDS |
| GTCAAATCCCCAGTGGAATC+AGG | 0.385686 | 4.1:+34753283 | MS.gene056344:CDS |
| GCACTACATTCATCCCTTAT+CGG | 0.387059 | 4.1:+34754567 | MS.gene056344:CDS |
| GCTTATTGCGTAGCAAAATT+CGG | 0.400530 | 4.1:+34754199 | MS.gene056344:CDS |
| TCTACTACTTCTTTCCTTAA+CGG | 0.401686 | 4.1:-34754661 | None:intergenic |
| GCATCAGAATGCCAAGAATC+AGG | 0.404599 | 4.1:-34753551 | None:intergenic |
| AACATGTATAAGAAAATTGT+TGG | 0.406603 | 4.1:-34754883 | None:intergenic |
| GGTTTGATCAAATTTGCAAT+TGG | 0.408748 | 4.1:+34754788 | MS.gene056344:CDS |
| CCTATTGTGATAACAGTAGA+TGG | 0.409352 | 4.1:-34754304 | None:intergenic |
| GAGAAGTTCAATTGGCTGTA+AGG | 0.412356 | 4.1:+34754482 | MS.gene056344:CDS |
| TTTACTTGTCTCCCAAGCTT+TGG | 0.414127 | 4.1:+34753618 | MS.gene056344:CDS |
| AAAGAACCAATATTATGAAT+AGG | 0.415882 | 4.1:-34754843 | None:intergenic |
| CCATCAGGTGTGAAGAAAAC+AGG | 0.419177 | 4.1:+34754460 | MS.gene056344:CDS |
| AACTCTTCGTCTAGTTCATC+GGG | 0.419737 | 4.1:-34754991 | None:intergenic |
| CTATCTGGTGGTATACGTTT+CGG | 0.421790 | 4.1:-34753422 | None:intergenic |
| AAAACTAAAGGTTCCTCAAA+TGG | 0.424899 | 4.1:-34753815 | None:intergenic |
| TCCAAGCTTCACTTCAACAT+AGG | 0.425674 | 4.1:-34753225 | None:intergenic |
| GCATAATCTCGAGAAGCATT+TGG | 0.428065 | 4.1:+34753949 | MS.gene056344:CDS |
| GCCAAGACACCCTCCACATA+TGG | 0.428256 | 4.1:+34754936 | MS.gene056344:CDS |
| GTTCGGCGTTGTCTCCTTAA+GGG | 0.430999 | 4.1:-34753069 | None:intergenic |
| GAAAACAGGAGAAGTTCAAT+TGG | 0.436493 | 4.1:+34754474 | MS.gene056344:CDS |
| TTCGACTAGGTCGTAGGTGC+AGG | 0.441940 | 4.1:-34753126 | None:intergenic |
| GAGAAGCATTTGGTTGTTGA+AGG | 0.447113 | 4.1:+34753959 | MS.gene056344:CDS |
| TCTTCCACGGTTAAAACTAA+AGG | 0.447661 | 4.1:-34753827 | None:intergenic |
| CAAGTTGTGTTACTAATCAC+TGG | 0.449588 | 4.1:+34755228 | MS.gene056344:CDS |
| CATTTAAGGTTATGTTTGGA+TGG | 0.455868 | 4.1:+34754016 | MS.gene056344:CDS |
| TCGAGCTGAATCACCGATAA+GGG | 0.456809 | 4.1:-34754580 | None:intergenic |
| ATGACTTTGTAGGGAGGGTG+TGG | 0.457243 | 4.1:+34753381 | MS.gene056344:CDS |
| TAAGGTTATGTTTGGATGGA+GGG | 0.461239 | 4.1:+34754020 | MS.gene056344:CDS |
| TTCCTCTTAATTTCTTTAGG+AGG | 0.462400 | 4.1:+34755298 | MS.gene056344:CDS |
| TGTCGCAGCCGAGCCATTTG+AGG | 0.464409 | 4.1:+34753802 | MS.gene056344:CDS |
| AGTATTGGTATTCTAGAAGT+AGG | 0.464674 | 4.1:+34754115 | MS.gene056344:CDS |
| TGACTTCTTCTCAAAATGCT+TGG | 0.466042 | 4.1:-34753264 | None:intergenic |
| ATTAGTAACACAACTTGAAA+AGG | 0.467619 | 4.1:-34755222 | None:intergenic |
| AACCTCCTAAAGAAATTAAG+AGG | 0.470949 | 4.1:-34755300 | None:intergenic |
| TTCCATAGCTGCTTCGCCGT+TGG | 0.471657 | 4.1:-34754088 | None:intergenic |
| CCAAGCTTCACTTCAACATA+GGG | 0.471707 | 4.1:-34753224 | None:intergenic |
| TATCAACGATTGTCCTAGTT+CGG | 0.471964 | 4.1:-34754234 | None:intergenic |
| ACTGCCCCTGCTCCAATGTT+CGG | 0.472062 | 4.1:-34753086 | None:intergenic |
| GGCCAACGGCGAAGCAGCTA+TGG | 0.472843 | 4.1:+34754086 | MS.gene056344:CDS |
| TCCATATGTGGAGGGTGTCT+TGG | 0.475204 | 4.1:-34754937 | None:intergenic |
| ATCGAGCTGAATCACCGATA+AGG | 0.475343 | 4.1:-34754581 | None:intergenic |
| CTCATCACAGTAGCGATCTT+AGG | 0.475654 | 4.1:+34754065 | MS.gene056344:CDS |
| ATCAAATCCTCATTCCATAT+AGG | 0.477985 | 4.1:-34753776 | None:intergenic |
| AAATCAAAGGATTCAAGGAT+AGG | 0.478120 | 4.1:+34754361 | MS.gene056344:CDS |
| GAGACAAATCAAAGGATTCA+AGG | 0.481184 | 4.1:+34754356 | MS.gene056344:CDS |
| GTTAATGCTTGCAGTTTGGA+TGG | 0.482127 | 4.1:+34753505 | MS.gene056344:CDS |
| GGAAGTTTCTGTCTGAATCT+AGG | 0.482384 | 4.1:-34755270 | None:intergenic |
| ATGTCCGAGGATCGTGATGT+AGG | 0.482898 | 4.1:-34755024 | None:intergenic |
| AAACTCTTCGTCTAGTTCAT+CGG | 0.483861 | 4.1:-34754992 | None:intergenic |
| ATGAAAACTAGAGATGGTAG+AGG | 0.489090 | 4.1:+34754166 | MS.gene056344:CDS |
| GAATTAGTATCGATGTAATC+GGG | 0.493253 | 4.1:-34754816 | None:intergenic |
| ACAACGCCGAACATTGGAGC+AGG | 0.497199 | 4.1:+34753080 | MS.gene056344:CDS |
| TTGTTGGAAGTATTAGTTCA+GGG | 0.498579 | 4.1:-34754867 | None:intergenic |
| GCCGAGCTGAGCCACCGTTA+AGG | 0.498838 | 4.1:+34754647 | MS.gene056344:CDS |
| TGCAAGCATTAACTCTCCCT+TGG | 0.498863 | 4.1:-34753495 | None:intergenic |
| AGGCGAAAACCTGATTCCAC+TGG | 0.501075 | 4.1:-34753292 | None:intergenic |
| TTTGATAACAATCATTTACA+TGG | 0.501614 | 4.1:+34754331 | MS.gene056344:CDS |
| CCCTATGTTGAAGTGAAGCT+TGG | 0.501694 | 4.1:+34753224 | MS.gene056344:CDS |
| GACCCTGACATACCAAAGCT+TGG | 0.501973 | 4.1:-34753630 | None:intergenic |
| ATCTTGCAACTCAAGGAGAA+AGG | 0.507382 | 4.1:+34755109 | MS.gene056344:CDS |
| TTAAGGTTATGTTTGGATGG+AGG | 0.508953 | 4.1:+34754019 | MS.gene056344:CDS |
| GGTCAATGTAATCGAAGCTC+AGG | 0.509959 | 4.1:+34753649 | MS.gene056344:CDS |
| TGTAATCGAAGCTCAGGACT+TGG | 0.512090 | 4.1:+34753655 | MS.gene056344:CDS |
| CATTCTGATGCAGCAATGGT+TGG | 0.514711 | 4.1:+34753563 | MS.gene056344:CDS |
| ACCCTGACATACCAAAGCTT+GGG | 0.516304 | 4.1:-34753629 | None:intergenic |
| TTATAGCAGATGACTTTGTA+GGG | 0.520298 | 4.1:+34753372 | MS.gene056344:CDS |
| GTGTATTGTTCATTCCACTT+TGG | 0.520325 | 4.1:-34754265 | None:intergenic |
| CTGTCCAACCCTGTCTTCCA+CGG | 0.525250 | 4.1:-34753840 | None:intergenic |
| TGTCCGAGGATCGTGATGTA+GGG | 0.528130 | 4.1:-34755023 | None:intergenic |
| TCCTTAACGGTGGCTCAGCT+CGG | 0.530257 | 4.1:-34754648 | None:intergenic |
| GGATGGAGGGTACCACGTGC+TGG | 0.531458 | 4.1:+34754033 | MS.gene056344:CDS |
| ACCATAAGCCGGTGAACACT+AGG | 0.534500 | 4.1:+34753924 | MS.gene056344:CDS |
| AAGAAATTAAGAGGAACTGA+TGG | 0.534713 | 4.1:-34755291 | None:intergenic |
| CAGCTATGGAAGTCAAGTAT+TGG | 0.535757 | 4.1:+34754100 | MS.gene056344:CDS |
| CTTCTCTAAAGATCGGATCC+AGG | 0.535901 | 4.1:+34753313 | MS.gene056344:CDS |
| AAGGAGACAACGCCGAACAT+TGG | 0.538827 | 4.1:+34753074 | MS.gene056344:CDS |
| CATAAATCCTATATGGAATG+AGG | 0.539747 | 4.1:+34753769 | MS.gene056344:CDS |
| GTATTGGTATTCTAGAAGTA+GGG | 0.539882 | 4.1:+34754116 | MS.gene056344:CDS |
| CTATACCATTGTGGAGCCAA+AGG | 0.540343 | 4.1:-34753446 | None:intergenic |
| GATGGATTTAGTACTAAAAG+AGG | 0.542003 | 4.1:-34754442 | None:intergenic |
| TCACCTCCAAAACAGAAGCC+TGG | 0.542592 | 4.1:-34753331 | None:intergenic |
| AGCAGATGACTTTGTAGGGA+GGG | 0.543188 | 4.1:+34753376 | MS.gene056344:CDS |
| AATCAAAGGATTCAAGGATA+GGG | 0.545049 | 4.1:+34754362 | MS.gene056344:CDS |
| GATCGATTAAGGAGCATCGG+AGG | 0.545593 | 4.1:+34755063 | MS.gene056344:CDS |
| TTGATAGCTTTAGTCCAAAG+TGG | 0.553928 | 4.1:+34754251 | MS.gene056344:CDS |
| TCCCAAGCTTTGGTATGTCA+GGG | 0.559256 | 4.1:+34753628 | MS.gene056344:CDS |
| TTGGCATTCTGATGCAGCAA+TGG | 0.559991 | 4.1:+34753559 | MS.gene056344:CDS |
| CGCCTTTGCACCATCTGCAA+AGG | 0.561102 | 4.1:-34753896 | None:intergenic |
| TTAATGCTTGCAGTTTGGAT+GGG | 0.561743 | 4.1:+34753506 | MS.gene056344:CDS |
| GACAGAAGTGGATCCGAACT+AGG | 0.563556 | 4.1:+34754221 | MS.gene056344:CDS |
| ATAGGTGATCTTGCAACTCA+AGG | 0.563643 | 4.1:+34755102 | MS.gene056344:CDS |
| TACGATCGATTAAGGAGCAT+CGG | 0.564721 | 4.1:+34755060 | MS.gene056344:CDS |
| CATTTGTTCGACTAGGTCGT+AGG | 0.565414 | 4.1:-34753132 | None:intergenic |
| ATCGATTAAGGAGCATCGGA+GGG | 0.569315 | 4.1:+34755064 | MS.gene056344:CDS |
| GCAAACTCATGAGAATTTGG+TGG | 0.569666 | 4.1:-34753047 | None:intergenic |
| TATACCACCAGATAGCCCTT+TGG | 0.574314 | 4.1:+34753430 | MS.gene056344:CDS |
| GGCGAAAACCTGATTCCACT+GGG | 0.574431 | 4.1:-34753291 | None:intergenic |
| TAAAGGTTCCTCAAATGGCT+CGG | 0.575679 | 4.1:-34753810 | None:intergenic |
| GTTCCCTACATCACGATCCT+CGG | 0.575947 | 4.1:+34755020 | MS.gene056344:CDS |
| TTGGAGCAGGGGCAGTCACA+AGG | 0.576593 | 4.1:+34753093 | MS.gene056344:CDS |
| TGATGCAGCAATGGTTGGAT+CGG | 0.576790 | 4.1:+34753568 | MS.gene056344:CDS |
| TTATGCCACCTAGTGTTCAC+CGG | 0.576945 | 4.1:-34753932 | None:intergenic |
| TTGCCTACAAAAGATGTCAC+TGG | 0.577219 | 4.1:+34753191 | MS.gene056344:CDS |
| TTTAAGTTGGAGAGATCCAA+GGG | 0.577772 | 4.1:+34755143 | MS.gene056344:CDS |
| TATACCATTGTGGAGCCAAA+GGG | 0.578790 | 4.1:-34753445 | None:intergenic |
| AGGACACCAAATTTGCAAGT+AGG | 0.580415 | 4.1:+34753990 | MS.gene056344:CDS |
| GATAGACTAGTGTCCATATG+TGG | 0.580812 | 4.1:-34754949 | None:intergenic |
| ATTTAGTACTAAAAGAGGAT+AGG | 0.582002 | 4.1:-34754437 | None:intergenic |
| GGTATTGCATTTGTTCGACT+AGG | 0.583006 | 4.1:-34753139 | None:intergenic |
| GATGGGAACTCAAGCAGATG+AGG | 0.587116 | 4.1:+34753523 | MS.gene056344:CDS |
| CGCAAAGGTGAGAAAGCCAA+GGG | 0.589435 | 4.1:+34753479 | MS.gene056344:CDS |
| AGTGAAGCTTGGAAACTACA+AGG | 0.589926 | 4.1:+34753235 | MS.gene056344:CDS |
| TAGCAAAATTCGGACAGAAG+TGG | 0.592882 | 4.1:+34754209 | MS.gene056344:CDS |
| TCGCAAAGGTGAGAAAGCCA+AGG | 0.596308 | 4.1:+34753478 | MS.gene056344:CDS |
| TGGTTCCAAGTGATAAAAGC+CGG | 0.597256 | 4.1:+34753675 | MS.gene056344:CDS |
| AACGCCGAACATTGGAGCAG+GGG | 0.599485 | 4.1:+34753082 | MS.gene056344:CDS |
| TTCCTTTGCAGATGGTGCAA+AGG | 0.599676 | 4.1:+34753894 | MS.gene056344:CDS |
| CTTTGCAGATGGTGCAAAGG+CGG | 0.603089 | 4.1:+34753897 | MS.gene056344:CDS |
| ACTACTTCTTTCCTTAACGG+TGG | 0.605059 | 4.1:-34754658 | None:intergenic |
| AGTGGAATGAACAATACACT+TGG | 0.605319 | 4.1:+34754269 | MS.gene056344:CDS |
| CTTTGACGACACGAACGTAG+AGG | 0.606450 | 4.1:-34753160 | None:intergenic |
| TGCTACGCAATAAGCATCTG+TGG | 0.606731 | 4.1:-34754191 | None:intergenic |
| ATGCCGATGAAAACTAGAGA+TGG | 0.607581 | 4.1:+34754160 | MS.gene056344:CDS |
| CAACGCCGAACATTGGAGCA+GGG | 0.608071 | 4.1:+34753081 | MS.gene056344:CDS |
| GAATATGGAACTTTAGATGG+AGG | 0.609696 | 4.1:+34754914 | MS.gene056344:CDS |
| AGACTAGTGTCCATATGTGG+AGG | 0.614164 | 4.1:-34754946 | None:intergenic |
| TTCATCGGGAAAAGCTGCGT+CGG | 0.616861 | 4.1:-34754977 | None:intergenic |
| AACATGCTATCTGATCTAGC+AGG | 0.617693 | 4.1:-34755324 | None:intergenic |
| CAGAACAAAGATGAAACGCT+AGG | 0.618253 | 4.1:+34753860 | MS.gene056344:CDS |
| CTGGATCCGATCTTTAGAGA+AGG | 0.623819 | 4.1:-34753312 | None:intergenic |
| AGTAGAATACATGCTTGATG+TGG | 0.623878 | 4.1:+34754678 | MS.gene056344:CDS |
| TTAACCGTGGAAGACAGGGT+TGG | 0.624449 | 4.1:+34753836 | MS.gene056344:CDS |
| AAAGGATTCAAGGATAGGGA+AGG | 0.624742 | 4.1:+34754366 | MS.gene056344:CDS |
| GTGTATGATTCCTTTGCAGA+TGG | 0.624945 | 4.1:+34753886 | MS.gene056344:CDS |
| GACTAGTGTCCATATGTGGA+GGG | 0.635062 | 4.1:-34754945 | None:intergenic |
| TAGCAGATGACTTTGTAGGG+AGG | 0.635329 | 4.1:+34753375 | MS.gene056344:CDS |
| ACATGGAGGAGACAAATCAA+AGG | 0.645399 | 4.1:+34754348 | MS.gene056344:CDS |
| CAGTAGCGATCTTAGGCCAA+CGG | 0.646139 | 4.1:+34754072 | MS.gene056344:CDS |
| AAGGCGGTTAGACCATAAGC+CGG | 0.646306 | 4.1:+34753913 | MS.gene056344:CDS |
| GTGGAATGAACAATACACTT+GGG | 0.646697 | 4.1:+34754270 | MS.gene056344:CDS |
| GTGAAGCTTGGAAACTACAA+GGG | 0.649278 | 4.1:+34753236 | MS.gene056344:CDS |
| TGAAAACTAGAGATGGTAGA+GGG | 0.649780 | 4.1:+34754167 | MS.gene056344:CDS |
| CGACACAAATTGTGTCGATG+AGG | 0.652303 | 4.1:+34754620 | MS.gene056344:CDS |
| TGGAGCAGGGGCAGTCACAA+GGG | 0.654414 | 4.1:+34753094 | MS.gene056344:CDS |
| GTAGGGATTATAAGTGCACA+CGG | 0.655466 | 4.1:+34754133 | MS.gene056344:CDS |
| GATAACAATCATTTACATGG+AGG | 0.657018 | 4.1:+34754334 | MS.gene056344:CDS |
| TCTTCGAGCCTATACCATTG+TGG | 0.666442 | 4.1:-34753455 | None:intergenic |
| TTGATGTGGATTCACATATG+TGG | 0.676798 | 4.1:+34754692 | MS.gene056344:CDS |
| GGAGCCAAAGGGCTATCTGG+TGG | 0.685901 | 4.1:-34753434 | None:intergenic |
| GAGTTGACTCGTCCAGCACG+TGG | 0.688670 | 4.1:-34754045 | None:intergenic |
| ATAAGCCGGTGAACACTAGG+TGG | 0.694077 | 4.1:+34753927 | MS.gene056344:CDS |
| ATAGCCCTTTGGCTCCACAA+TGG | 0.694840 | 4.1:+34753441 | MS.gene056344:CDS |
| AGAAGAAGTCAAATCCCCAG+TGG | 0.701980 | 4.1:+34753276 | MS.gene056344:CDS |
| TCTCATTCGAACAATGTCCG+AGG | 0.706520 | 4.1:-34755037 | None:intergenic |
| TATAGGCTCGAAGATCGCAA+AGG | 0.722679 | 4.1:+34753464 | MS.gene056344:CDS |
| TAGGGATTATAAGTGCACAC+GGG | 0.747797 | 4.1:+34754134 | MS.gene056344:CDS |
| GCGAAAACCTGATTCCACTG+GGG | 0.783494 | 4.1:-34753290 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAACCAATATTATGAAT+AGG | - | chr4.1:34754846-34754865 | None:intergenic | 20.0% |
| !! | AACATGTATAAGAAAATTGT+TGG | - | chr4.1:34754886-34754905 | None:intergenic | 20.0% |
| !! | TCATATCCTATTCATAATAT+TGG | + | chr4.1:34754837-34754856 | MS.gene056344:CDS | 20.0% |
| !!! | TTTCATTATTCTGAAGAAAT+TGG | - | chr4.1:34754737-34754756 | None:intergenic | 20.0% |
| !!! | TTTGATAACAATCATTTACA+TGG | + | chr4.1:34754331-34754350 | MS.gene056344:CDS | 20.0% |
| ! | ATTAGTAACACAACTTGAAA+AGG | - | chr4.1:34755225-34755244 | None:intergenic | 25.0% |
| ! | ATTTAGTACTAAAAGAGGAT+AGG | - | chr4.1:34754440-34754459 | None:intergenic | 25.0% |
| ! | TTCTTATACATGTTCATGAT+TGG | + | chr4.1:34754892-34754911 | MS.gene056344:CDS | 25.0% |
| !! | GATACATTTAAGGTTATGTT+TGG | + | chr4.1:34754012-34754031 | MS.gene056344:CDS | 25.0% |
| !!! | TGAATTAGTATCGATGTAAT+CGG | - | chr4.1:34754820-34754839 | None:intergenic | 25.0% |
| AAAACTAAAGGTTCCTCAAA+TGG | - | chr4.1:34753818-34753837 | None:intergenic | 30.0% | |
| AAATCAAAGGATTCAAGGAT+AGG | + | chr4.1:34754361-34754380 | MS.gene056344:CDS | 30.0% | |
| AACCTCCTAAAGAAATTAAG+AGG | - | chr4.1:34755303-34755322 | None:intergenic | 30.0% | |
| AAGAAATTAAGAGGAACTGA+TGG | - | chr4.1:34755294-34755313 | None:intergenic | 30.0% | |
| AATCAAAGGATTCAAGGATA+GGG | + | chr4.1:34754362-34754381 | MS.gene056344:CDS | 30.0% | |
| ACATGTTCATGATTGGAATA+TGG | + | chr4.1:34754899-34754918 | MS.gene056344:CDS | 30.0% | |
| ATCAAATCCTCATTCCATAT+AGG | - | chr4.1:34753779-34753798 | None:intergenic | 30.0% | |
| ATGTATCCTACTTGCAAATT+TGG | - | chr4.1:34753999-34754018 | None:intergenic | 30.0% | |
| CAGTTCCTCTTAATTTCTTT+AGG | + | chr4.1:34755295-34755314 | MS.gene056344:CDS | 30.0% | |
| CATAAATCCTATATGGAATG+AGG | + | chr4.1:34753769-34753788 | MS.gene056344:CDS | 30.0% | |
| CTCATTCCATATAGGATTTA+TGG | - | chr4.1:34753771-34753790 | None:intergenic | 30.0% | |
| GATAACAATCATTTACATGG+AGG | + | chr4.1:34754334-34754353 | MS.gene056344:CDS | 30.0% | |
| GGTTTGATCAAATTTGCAAT+TGG | + | chr4.1:34754788-34754807 | MS.gene056344:CDS | 30.0% | |
| TCTACTACTTCTTTCCTTAA+CGG | - | chr4.1:34754664-34754683 | None:intergenic | 30.0% | |
| TGAAGACCATAAATCCTATA+TGG | + | chr4.1:34753762-34753781 | MS.gene056344:CDS | 30.0% | |
| TTATAGCAGATGACTTTGTA+GGG | + | chr4.1:34753372-34753391 | MS.gene056344:CDS | 30.0% | |
| TTCCTCTTAATTTCTTTAGG+AGG | + | chr4.1:34755298-34755317 | MS.gene056344:CDS | 30.0% | |
| TTGCAAGTAGGATACATTTA+AGG | + | chr4.1:34754002-34754021 | MS.gene056344:CDS | 30.0% | |
| TTGGAATATGGAACTTTAGA+TGG | + | chr4.1:34754911-34754930 | MS.gene056344:CDS | 30.0% | |
| ! | ATCTTTTGTAGGCAATTCTT+TGG | - | chr4.1:34753186-34753205 | None:intergenic | 30.0% |
| ! | CATTTAAGGTTATGTTTGGA+TGG | + | chr4.1:34754016-34754035 | MS.gene056344:CDS | 30.0% |
| ! | CTTTTAGTACTAAATCCATC+AGG | + | chr4.1:34754445-34754464 | MS.gene056344:CDS | 30.0% |
| ! | GATGGATTTAGTACTAAAAG+AGG | - | chr4.1:34754445-34754464 | None:intergenic | 30.0% |
| ! | GTATTGGTATTCTAGAAGTA+GGG | + | chr4.1:34754116-34754135 | MS.gene056344:CDS | 30.0% |
| !! | AGTATTGGTATTCTAGAAGT+AGG | + | chr4.1:34754115-34754134 | MS.gene056344:CDS | 30.0% |
| !! | ATTGTTGGAAGTATTAGTTC+AGG | - | chr4.1:34754871-34754890 | None:intergenic | 30.0% |
| !! | GAATTAGTATCGATGTAATC+GGG | - | chr4.1:34754819-34754838 | None:intergenic | 30.0% |
| !! | GGTTTCAAAGTCTTTTAAGT+TGG | + | chr4.1:34755130-34755149 | MS.gene056344:CDS | 30.0% |
| !! | TTGTTGGAAGTATTAGTTCA+GGG | - | chr4.1:34754870-34754889 | None:intergenic | 30.0% |
| AGTAGAATACATGCTTGATG+TGG | + | chr4.1:34754678-34754697 | MS.gene056344:CDS | 35.0% | |
| AGTGGAATGAACAATACACT+TGG | + | chr4.1:34754269-34754288 | MS.gene056344:CDS | 35.0% | |
| ATGAAAACTAGAGATGGTAG+AGG | + | chr4.1:34754166-34754185 | MS.gene056344:CDS | 35.0% | |
| CCATCTACTGTTATCACAAT+AGG | + | chr4.1:34754304-34754323 | MS.gene056344:CDS | 35.0% | |
| CCTATTGTGATAACAGTAGA+TGG | - | chr4.1:34754307-34754326 | None:intergenic | 35.0% | |
| GAAAACAGGAGAAGTTCAAT+TGG | + | chr4.1:34754474-34754493 | MS.gene056344:CDS | 35.0% | |
| GAATATGGAACTTTAGATGG+AGG | + | chr4.1:34754914-34754933 | MS.gene056344:CDS | 35.0% | |
| GAATGAGATACGATCGATTA+AGG | + | chr4.1:34755052-34755071 | MS.gene056344:CDS | 35.0% | |
| GAGACAAATCAAAGGATTCA+AGG | + | chr4.1:34754356-34754375 | MS.gene056344:CDS | 35.0% | |
| GCTTATTGCGTAGCAAAATT+CGG | + | chr4.1:34754199-34754218 | MS.gene056344:CDS | 35.0% | |
| GGTTGTTGAAGGTGAAAAAA+AGG | + | chr4.1:34753970-34753989 | MS.gene056344:CDS | 35.0% | |
| GTGGAATGAACAATACACTT+GGG | + | chr4.1:34754270-34754289 | MS.gene056344:CDS | 35.0% | |
| GTGTATTGTTCATTCCACTT+TGG | - | chr4.1:34754268-34754287 | None:intergenic | 35.0% | |
| GTTATAGCAGATGACTTTGT+AGG | + | chr4.1:34753371-34753390 | MS.gene056344:CDS | 35.0% | |
| TAAGGTTATGTTTGGATGGA+GGG | + | chr4.1:34754020-34754039 | MS.gene056344:CDS | 35.0% | |
| TATCAACGATTGTCCTAGTT+CGG | - | chr4.1:34754237-34754256 | None:intergenic | 35.0% | |
| TCACAAAAACTTCTGGATAC+CGG | - | chr4.1:34753697-34753716 | None:intergenic | 35.0% | |
| TCTTCCACGGTTAAAACTAA+AGG | - | chr4.1:34753830-34753849 | None:intergenic | 35.0% | |
| TGAAAACTAGAGATGGTAGA+GGG | + | chr4.1:34754167-34754186 | MS.gene056344:CDS | 35.0% | |
| TGACTTCTTCTCAAAATGCT+TGG | - | chr4.1:34753267-34753286 | None:intergenic | 35.0% | |
| TTAAGGTTATGTTTGGATGG+AGG | + | chr4.1:34754019-34754038 | MS.gene056344:CDS | 35.0% | |
| TTAATGCTTGCAGTTTGGAT+GGG | + | chr4.1:34753506-34753525 | MS.gene056344:CDS | 35.0% | |
| TTATCGAGTTTGATCGCTTT+CGG | + | chr4.1:34754760-34754779 | MS.gene056344:CDS | 35.0% | |
| TTGATGTGGATTCACATATG+TGG | + | chr4.1:34754692-34754711 | MS.gene056344:CDS | 35.0% | |
| ! | AAACTCTTCGTCTAGTTCAT+CGG | - | chr4.1:34754995-34755014 | None:intergenic | 35.0% |
| ! | CAAGTTGTGTTACTAATCAC+TGG | + | chr4.1:34755228-34755247 | MS.gene056344:CDS | 35.0% |
| ! | GGATGAATGTAGTGCATTTT+CGG | - | chr4.1:34754562-34754581 | None:intergenic | 35.0% |
| ! | GTATCCAGAAGTTTTTGTGA+AGG | + | chr4.1:34753697-34753716 | MS.gene056344:CDS | 35.0% |
| ! | TTTTTGTGAAGGTTGCTCTA+GGG | + | chr4.1:34753708-34753727 | MS.gene056344:CDS | 35.0% |
| !! | TTGATAGCTTTAGTCCAAAG+TGG | + | chr4.1:34754251-34754270 | MS.gene056344:CDS | 35.0% |
| !! | TTTAAGTTGGAGAGATCCAA+GGG | + | chr4.1:34755143-34755162 | MS.gene056344:CDS | 35.0% |
| !! | TTTTCGCCTTCTCTAAAGAT+CGG | + | chr4.1:34753306-34753325 | MS.gene056344:CDS | 35.0% |
| !!! | CTACCATCTCTAGTTTTCAT+CGG | - | chr4.1:34754166-34754185 | None:intergenic | 35.0% |
| !!! | TTTTAAGTTGGAGAGATCCA+AGG | + | chr4.1:34755142-34755161 | MS.gene056344:CDS | 35.0% |
| AAAGGATTCAAGGATAGGGA+AGG | + | chr4.1:34754366-34754385 | MS.gene056344:CDS | 40.0% | |
| AACATGCTATCTGATCTAGC+AGG | - | chr4.1:34755327-34755346 | None:intergenic | 40.0% | |
| ACATGGAGGAGACAAATCAA+AGG | + | chr4.1:34754348-34754367 | MS.gene056344:CDS | 40.0% | |
| ACTACTTCTTTCCTTAACGG+TGG | - | chr4.1:34754661-34754680 | None:intergenic | 40.0% | |
| AGGACACCAAATTTGCAAGT+AGG | + | chr4.1:34753990-34754009 | MS.gene056344:CDS | 40.0% | |
| AGGGCAAACTCATGAGAATT+TGG | - | chr4.1:34753053-34753072 | None:intergenic | 40.0% | |
| AGTGAAGCTTGGAAACTACA+AGG | + | chr4.1:34753235-34753254 | MS.gene056344:CDS | 40.0% | |
| ATAGGTGATCTTGCAACTCA+AGG | + | chr4.1:34755102-34755121 | MS.gene056344:CDS | 40.0% | |
| ATCTTGCAACTCAAGGAGAA+AGG | + | chr4.1:34755109-34755128 | MS.gene056344:CDS | 40.0% | |
| ATGCCGATGAAAACTAGAGA+TGG | + | chr4.1:34754160-34754179 | MS.gene056344:CDS | 40.0% | |
| CAGAACAAAGATGAAACGCT+AGG | + | chr4.1:34753860-34753879 | MS.gene056344:CDS | 40.0% | |
| CAGCTATGGAAGTCAAGTAT+TGG | + | chr4.1:34754100-34754119 | MS.gene056344:CDS | 40.0% | |
| CCAAGCTTCACTTCAACATA+GGG | - | chr4.1:34753227-34753246 | None:intergenic | 40.0% | |
| CTATCTGGTGGTATACGTTT+CGG | - | chr4.1:34753425-34753444 | None:intergenic | 40.0% | |
| GAGAAGTTCAATTGGCTGTA+AGG | + | chr4.1:34754482-34754501 | MS.gene056344:CDS | 40.0% | |
| GAGAGTTAATGCTTGCAGTT+TGG | + | chr4.1:34753501-34753520 | MS.gene056344:CDS | 40.0% | |
| GATAGACTAGTGTCCATATG+TGG | - | chr4.1:34754952-34754971 | None:intergenic | 40.0% | |
| GCAAACTCATGAGAATTTGG+TGG | - | chr4.1:34753050-34753069 | None:intergenic | 40.0% | |
| GCAACCTTCACAAAAACTTC+TGG | - | chr4.1:34753704-34753723 | None:intergenic | 40.0% | |
| GCACTACATTCATCCCTTAT+CGG | + | chr4.1:34754567-34754586 | MS.gene056344:CDS | 40.0% | |
| GGAAGTTTCTGTCTGAATCT+AGG | - | chr4.1:34755273-34755292 | None:intergenic | 40.0% | |
| GGATAGGGAAGGTAAGAATT+AGG | + | chr4.1:34754377-34754396 | MS.gene056344:CDS | 40.0% | |
| GGTATTGCATTTGTTCGACT+AGG | - | chr4.1:34753142-34753161 | None:intergenic | 40.0% | |
| GTAGGGATTATAAGTGCACA+CGG | + | chr4.1:34754133-34754152 | MS.gene056344:CDS | 40.0% | |
| GTGAAGCTTGGAAACTACAA+GGG | + | chr4.1:34753236-34753255 | MS.gene056344:CDS | 40.0% | |
| GTGTATGATTCCTTTGCAGA+TGG | + | chr4.1:34753886-34753905 | MS.gene056344:CDS | 40.0% | |
| GTTAATGCTTGCAGTTTGGA+TGG | + | chr4.1:34753505-34753524 | MS.gene056344:CDS | 40.0% | |
| GTTTGATCGCTTTCGGAAAA+TGG | + | chr4.1:34754767-34754786 | MS.gene056344:CDS | 40.0% | |
| TAAAGGTTCCTCAAATGGCT+CGG | - | chr4.1:34753813-34753832 | None:intergenic | 40.0% | |
| TAGCAAAATTCGGACAGAAG+TGG | + | chr4.1:34754209-34754228 | MS.gene056344:CDS | 40.0% | |
| TAGGGATTATAAGTGCACAC+GGG | + | chr4.1:34754134-34754153 | MS.gene056344:CDS | 40.0% | |
| TATACCATTGTGGAGCCAAA+GGG | - | chr4.1:34753448-34753467 | None:intergenic | 40.0% | |
| TCCAAGCTTCACTTCAACAT+AGG | - | chr4.1:34753228-34753247 | None:intergenic | 40.0% | |
| TGATTCAGCTCGATCATCTA+AGG | + | chr4.1:34754590-34754609 | MS.gene056344:CDS | 40.0% | |
| TGGTTCCAAGTGATAAAAGC+CGG | + | chr4.1:34753675-34753694 | MS.gene056344:CDS | 40.0% | |
| TTCTCATGAGTTTGCCCTTA+AGG | + | chr4.1:34753055-34753074 | MS.gene056344:CDS | 40.0% | |
| TTGCCTACAAAAGATGTCAC+TGG | + | chr4.1:34753191-34753210 | MS.gene056344:CDS | 40.0% | |
| TTTACTTGTCTCCCAAGCTT+TGG | + | chr4.1:34753618-34753637 | MS.gene056344:CDS | 40.0% | |
| ! | AACTCTTCGTCTAGTTCATC+GGG | - | chr4.1:34754994-34755013 | None:intergenic | 40.0% |
| ! | ACAAAAAGTGTAGTAGCCCT+TGG | - | chr4.1:34755162-34755181 | None:intergenic | 40.0% |
| ! | ATGAGGCATTTCCTGATTCT+TGG | + | chr4.1:34753540-34753559 | MS.gene056344:CDS | 40.0% |
| ! | CTACCAGTGACATCTTTTGT+AGG | - | chr4.1:34753197-34753216 | None:intergenic | 40.0% |
| ! | GGGAGAGTTCAAAGTGTTAT+AGG | + | chr4.1:34755084-34755103 | MS.gene056344:CDS | 40.0% |
| ! | GTTTTTGTGAAGGTTGCTCT+AGG | + | chr4.1:34753707-34753726 | MS.gene056344:CDS | 40.0% |
| ! | TACGATCGATTAAGGAGCAT+CGG | + | chr4.1:34755060-34755079 | MS.gene056344:CDS | 40.0% |
| !! | AGTTTTAACCGTGGAAGACA+GGG | + | chr4.1:34753832-34753851 | MS.gene056344:CDS | 40.0% |
| !! | GAGAAGCATTTGGTTGTTGA+AGG | + | chr4.1:34753959-34753978 | MS.gene056344:CDS | 40.0% |
| !! | GCATAATCTCGAGAAGCATT+TGG | + | chr4.1:34753949-34753968 | MS.gene056344:CDS | 40.0% |
| !!! | GGAACCTTTAGTTTTAACCG+TGG | + | chr4.1:34753823-34753842 | MS.gene056344:CDS | 40.0% |
| !!! | TAGTTTTAACCGTGGAAGAC+AGG | + | chr4.1:34753831-34753850 | MS.gene056344:CDS | 40.0% |
| ACCCTGACATACCAAAGCTT+GGG | - | chr4.1:34753632-34753651 | None:intergenic | 45.0% | |
| AGAAGAAGTCAAATCCCCAG+TGG | + | chr4.1:34753276-34753295 | MS.gene056344:CDS | 45.0% | |
| AGACTAGTGTCCATATGTGG+AGG | - | chr4.1:34754949-34754968 | None:intergenic | 45.0% | |
| AGCAGATGACTTTGTAGGGA+GGG | + | chr4.1:34753376-34753395 | MS.gene056344:CDS | 45.0% | |
| ATCGAGCTGAATCACCGATA+AGG | - | chr4.1:34754584-34754603 | None:intergenic | 45.0% | |
| CATTCTGATGCAGCAATGGT+TGG | + | chr4.1:34753563-34753582 | MS.gene056344:CDS | 45.0% | |
| CATTTGTTCGACTAGGTCGT+AGG | - | chr4.1:34753135-34753154 | None:intergenic | 45.0% | |
| CCATCAGGTGTGAAGAAAAC+AGG | + | chr4.1:34754460-34754479 | MS.gene056344:CDS | 45.0% | |
| CCCTATGTTGAAGTGAAGCT+TGG | + | chr4.1:34753224-34753243 | MS.gene056344:CDS | 45.0% | |
| CTATACCATTGTGGAGCCAA+AGG | - | chr4.1:34753449-34753468 | None:intergenic | 45.0% | |
| CTCATCACAGTAGCGATCTT+AGG | + | chr4.1:34754065-34754084 | MS.gene056344:CDS | 45.0% | |
| GACTAGTGTCCATATGTGGA+GGG | - | chr4.1:34754948-34754967 | None:intergenic | 45.0% | |
| GCATCAGAATGCCAAGAATC+AGG | - | chr4.1:34753554-34753573 | None:intergenic | 45.0% | |
| GGTCAATGTAATCGAAGCTC+AGG | + | chr4.1:34753649-34753668 | MS.gene056344:CDS | 45.0% | |
| TAGCAGATGACTTTGTAGGG+AGG | + | chr4.1:34753375-34753394 | MS.gene056344:CDS | 45.0% | |
| TATACCACCAGATAGCCCTT+TGG | + | chr4.1:34753430-34753449 | MS.gene056344:CDS | 45.0% | |
| TATAGGCTCGAAGATCGCAA+AGG | + | chr4.1:34753464-34753483 | MS.gene056344:CDS | 45.0% | |
| TCGAGCTGAATCACCGATAA+GGG | - | chr4.1:34754583-34754602 | None:intergenic | 45.0% | |
| TCTCATTCGAACAATGTCCG+AGG | - | chr4.1:34755040-34755059 | None:intergenic | 45.0% | |
| TCTTCGAGCCTATACCATTG+TGG | - | chr4.1:34753458-34753477 | None:intergenic | 45.0% | |
| TGATGCAGCAATGGTTGGAT+CGG | + | chr4.1:34753568-34753587 | MS.gene056344:CDS | 45.0% | |
| TGCAAGCATTAACTCTCCCT+TGG | - | chr4.1:34753498-34753517 | None:intergenic | 45.0% | |
| TGCTACGCAATAAGCATCTG+TGG | - | chr4.1:34754194-34754213 | None:intergenic | 45.0% | |
| TGTAATCGAAGCTCAGGACT+TGG | + | chr4.1:34753655-34753674 | MS.gene056344:CDS | 45.0% | |
| TTATGCCACCTAGTGTTCAC+CGG | - | chr4.1:34753935-34753954 | None:intergenic | 45.0% | |
| TTCCTTTGCAGATGGTGCAA+AGG | + | chr4.1:34753894-34753913 | MS.gene056344:CDS | 45.0% | |
| TTGGCATTCTGATGCAGCAA+TGG | + | chr4.1:34753559-34753578 | MS.gene056344:CDS | 45.0% | |
| ! | CCTGTTTTCTTCACACCTGA+TGG | - | chr4.1:34754463-34754482 | None:intergenic | 45.0% |
| ! | CGACACAAATTGTGTCGATG+AGG | + | chr4.1:34754620-34754639 | MS.gene056344:CDS | 45.0% |
| ! | CTGGATCCGATCTTTAGAGA+AGG | - | chr4.1:34753315-34753334 | None:intergenic | 45.0% |
| ! | CTTCTCTAAAGATCGGATCC+AGG | + | chr4.1:34753313-34753332 | MS.gene056344:CDS | 45.0% |
| ! | CTTTGGCTCCACAATGGTAT+AGG | + | chr4.1:34753447-34753466 | MS.gene056344:CDS | 45.0% |
| ! | TCCCAAGCTTTGGTATGTCA+GGG | + | chr4.1:34753628-34753647 | MS.gene056344:CDS | 45.0% |
| !! | ATCGATTAAGGAGCATCGGA+GGG | + | chr4.1:34755064-34755083 | MS.gene056344:CDS | 45.0% |
| !!! | GGATACCGGCTTTTATCACT+TGG | - | chr4.1:34753683-34753702 | None:intergenic | 45.0% |
| AAGGAGACAACGCCGAACAT+TGG | + | chr4.1:34753074-34753093 | MS.gene056344:CDS | 50.0% | |
| AAGGCGGTTAGACCATAAGC+CGG | + | chr4.1:34753913-34753932 | MS.gene056344:CDS | 50.0% | |
| ACCATAAGCCGGTGAACACT+AGG | + | chr4.1:34753924-34753943 | MS.gene056344:CDS | 50.0% | |
| AGGCGAAAACCTGATTCCAC+TGG | - | chr4.1:34753295-34753314 | None:intergenic | 50.0% | |
| ATAAGCCGGTGAACACTAGG+TGG | + | chr4.1:34753927-34753946 | MS.gene056344:CDS | 50.0% | |
| ATGACTTTGTAGGGAGGGTG+TGG | + | chr4.1:34753381-34753400 | MS.gene056344:CDS | 50.0% | |
| ATGTCCGAGGATCGTGATGT+AGG | - | chr4.1:34755027-34755046 | None:intergenic | 50.0% | |
| CAGTAGCGATCTTAGGCCAA+CGG | + | chr4.1:34754072-34754091 | MS.gene056344:CDS | 50.0% | |
| CGCAAAGGTGAGAAAGCCAA+GGG | + | chr4.1:34753479-34753498 | MS.gene056344:CDS | 50.0% | |
| CTTTGACGACACGAACGTAG+AGG | - | chr4.1:34753163-34753182 | None:intergenic | 50.0% | |
| CTTTGCAGATGGTGCAAAGG+CGG | + | chr4.1:34753897-34753916 | MS.gene056344:CDS | 50.0% | |
| GACAGAAGTGGATCCGAACT+AGG | + | chr4.1:34754221-34754240 | MS.gene056344:CDS | 50.0% | |
| GACCCTGACATACCAAAGCT+TGG | - | chr4.1:34753633-34753652 | None:intergenic | 50.0% | |
| GATGGGAACTCAAGCAGATG+AGG | + | chr4.1:34753523-34753542 | MS.gene056344:CDS | 50.0% | |
| GCGAAAACCTGATTCCACTG+GGG | - | chr4.1:34753293-34753312 | None:intergenic | 50.0% | |
| GGCGAAAACCTGATTCCACT+GGG | - | chr4.1:34753294-34753313 | None:intergenic | 50.0% | |
| GTCAAATCCCCAGTGGAATC+AGG | + | chr4.1:34753283-34753302 | MS.gene056344:CDS | 50.0% | |
| GTTCCCTACATCACGATCCT+CGG | + | chr4.1:34755020-34755039 | MS.gene056344:CDS | 50.0% | |
| GTTCGGCGTTGTCTCCTTAA+GGG | - | chr4.1:34753072-34753091 | None:intergenic | 50.0% | |
| TCACCTCCAAAACAGAAGCC+TGG | - | chr4.1:34753334-34753353 | None:intergenic | 50.0% | |
| TCGCAAAGGTGAGAAAGCCA+AGG | + | chr4.1:34753478-34753497 | MS.gene056344:CDS | 50.0% | |
| TGTCCGAGGATCGTGATGTA+GGG | - | chr4.1:34755026-34755045 | None:intergenic | 50.0% | |
| TGTTCGGCGTTGTCTCCTTA+AGG | - | chr4.1:34753073-34753092 | None:intergenic | 50.0% | |
| TTAACCGTGGAAGACAGGGT+TGG | + | chr4.1:34753836-34753855 | MS.gene056344:CDS | 50.0% | |
| TTCATCGGGAAAAGCTGCGT+CGG | - | chr4.1:34754980-34754999 | None:intergenic | 50.0% | |
| ! | ATAGCCCTTTGGCTCCACAA+TGG | + | chr4.1:34753441-34753460 | MS.gene056344:CDS | 50.0% |
| ! | CTCCCAAGCTTTGGTATGTC+AGG | + | chr4.1:34753627-34753646 | MS.gene056344:CDS | 50.0% |
| ! | TAGTGCATTTTCGGCAGCAG+CGG | - | chr4.1:34754553-34754572 | None:intergenic | 50.0% |
| ! | TCGGATCCAGGCTTCTGTTT+TGG | + | chr4.1:34753325-34753344 | MS.gene056344:CDS | 50.0% |
| !! | ACCTAGTGTTCACCGGCTTA+TGG | - | chr4.1:34753928-34753947 | None:intergenic | 50.0% |
| !! | GATCCAGGCTTCTGTTTTGG+AGG | + | chr4.1:34753328-34753347 | MS.gene056344:CDS | 50.0% |
| !! | GATCGATTAAGGAGCATCGG+AGG | + | chr4.1:34755063-34755082 | MS.gene056344:CDS | 50.0% |
| !! | TCCATATGTGGAGGGTGTCT+TGG | - | chr4.1:34754940-34754959 | None:intergenic | 50.0% |
| AACGCCGAACATTGGAGCAG+GGG | + | chr4.1:34753082-34753101 | MS.gene056344:CDS | 55.0% | |
| ACAACGCCGAACATTGGAGC+AGG | + | chr4.1:34753080-34753099 | MS.gene056344:CDS | 55.0% | |
| ACTGCCCCTGCTCCAATGTT+CGG | - | chr4.1:34753089-34753108 | None:intergenic | 55.0% | |
| CAACGCCGAACATTGGAGCA+GGG | + | chr4.1:34753081-34753100 | MS.gene056344:CDS | 55.0% | |
| CGCCTTTGCACCATCTGCAA+AGG | - | chr4.1:34753899-34753918 | None:intergenic | 55.0% | |
| CTGTCCAACCCTGTCTTCCA+CGG | - | chr4.1:34753843-34753862 | None:intergenic | 55.0% | |
| GCCAAGACACCCTCCACATA+TGG | + | chr4.1:34754936-34754955 | MS.gene056344:CDS | 55.0% | |
| TCCTTAACGGTGGCTCAGCT+CGG | - | chr4.1:34754651-34754670 | None:intergenic | 55.0% | |
| TGTGGAGCCAAAGGGCTATC+TGG | - | chr4.1:34753440-34753459 | None:intergenic | 55.0% | |
| TTCCATAGCTGCTTCGCCGT+TGG | - | chr4.1:34754091-34754110 | None:intergenic | 55.0% | |
| TTCGACTAGGTCGTAGGTGC+AGG | - | chr4.1:34753129-34753148 | None:intergenic | 55.0% | |
| GGAGCCAAAGGGCTATCTGG+TGG | - | chr4.1:34753437-34753456 | None:intergenic | 60.0% | |
| TGGAGCAGGGGCAGTCACAA+GGG | + | chr4.1:34753094-34753113 | MS.gene056344:CDS | 60.0% | |
| TGTCGCAGCCGAGCCATTTG+AGG | + | chr4.1:34753802-34753821 | MS.gene056344:CDS | 60.0% | |
| TTGGAGCAGGGGCAGTCACA+AGG | + | chr4.1:34753093-34753112 | MS.gene056344:CDS | 60.0% | |
| ! | CATTTTCGGCAGCAGCGGCA+TGG | - | chr4.1:34754548-34754567 | None:intergenic | 60.0% |
| !! | GAGTTGACTCGTCCAGCACG+TGG | - | chr4.1:34754048-34754067 | None:intergenic | 60.0% |
| GCCGAGCTGAGCCACCGTTA+AGG | + | chr4.1:34754647-34754666 | MS.gene056344:CDS | 65.0% | |
| GGCCAACGGCGAAGCAGCTA+TGG | + | chr4.1:34754086-34754105 | MS.gene056344:CDS | 65.0% | |
| !! | GGATGGAGGGTACCACGTGC+TGG | + | chr4.1:34754033-34754052 | MS.gene056344:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 34753038 | 34755350 | 34753038 | ID=MS.gene056344 |
| chr4.1 | mRNA | 34753038 | 34755350 | 34753038 | ID=MS.gene056344.t1;Parent=MS.gene056344 |
| chr4.1 | exon | 34753038 | 34755350 | 34753038 | ID=MS.gene056344.t1.exon1;Parent=MS.gene056344.t1 |
| chr4.1 | CDS | 34753038 | 34755350 | 34753038 | ID=cds.MS.gene056344.t1;Parent=MS.gene056344.t1 |
| Gene Sequence |
| Protein sequence |
