Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020509.t1 | XP_003630927.1 | 100 | 154 | 0 | 0 | 1 | 154 | 1 | 154 | 3.20E-79 | 304.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020509.t1 | Q08112 | 91.6 | 154 | 11 | 1 | 1 | 154 | 1 | 152 | 2.7e-74 | 279.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020509.t1 | G7LAJ5 | 100.0 | 154 | 0 | 0 | 1 | 154 | 1 | 154 | 2.3e-79 | 304.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene020509 | MS.gene97614 | PPI |
| MS.gene020509 | MS.gene60716 | PPI |
| MS.gene006126 | MS.gene020509 | PPI |
| MS.gene020509 | MS.gene054292 | PPI |
| MS.gene020509 | MS.gene006122 | PPI |
| MS.gene020509 | MS.gene006123 | PPI |
| MS.gene62695 | MS.gene020509 | PPI |
| MS.gene020509 | MS.gene03522 | PPI |
| MS.gene020509 | MS.gene60717 | PPI |
| MS.gene020509 | MS.gene80490 | PPI |
| MS.gene020509 | MS.gene88892 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020509.t1 | MTR_8g105110 | 100.000 | 154 | 0 | 0 | 1 | 154 | 1 | 154 | 4.92e-111 | 312 |
| MS.gene020509.t1 | MTR_1g070450 | 95.455 | 154 | 5 | 1 | 1 | 154 | 1 | 152 | 4.61e-104 | 294 |
| MS.gene020509.t1 | MTR_4g075450 | 92.857 | 154 | 9 | 1 | 1 | 154 | 1 | 152 | 4.90e-92 | 264 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020509.t1 | AT5G09500 | 87.662 | 154 | 15 | 1 | 1 | 154 | 1 | 150 | 1.07e-93 | 268 |
| MS.gene020509.t1 | AT5G09510 | 91.558 | 154 | 11 | 1 | 1 | 154 | 1 | 152 | 3.57e-92 | 264 |
| MS.gene020509.t1 | AT1G04270 | 91.558 | 154 | 11 | 1 | 1 | 154 | 1 | 152 | 4.12e-92 | 264 |
| MS.gene020509.t1 | AT1G04270 | 90.909 | 154 | 11 | 2 | 1 | 154 | 1 | 151 | 1.39e-89 | 258 |
| MS.gene020509.t1 | AT5G09490 | 81.818 | 154 | 26 | 1 | 1 | 154 | 1 | 152 | 9.71e-89 | 255 |
| MS.gene020509.t1 | AT5G43640 | 85.906 | 149 | 21 | 0 | 6 | 154 | 1 | 149 | 1.10e-82 | 240 |
| MS.gene020509.t1 | AT5G09510 | 94.915 | 118 | 6 | 0 | 37 | 154 | 1 | 118 | 2.08e-71 | 210 |
| MS.gene020509.t1 | AT5G63070 | 62.500 | 160 | 54 | 2 | 1 | 154 | 1 | 160 | 3.08e-64 | 194 |
| MS.gene020509.t1 | AT1G33850 | 83.607 | 61 | 10 | 0 | 12 | 72 | 7 | 67 | 1.12e-19 | 78.2 |
Find 43 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATTTCAACTTGGTTAA+AGG | 0.236449 | 4.3:-1455179 | None:intergenic |
| GAGATGATTGGGAGCATTAT+TGG | 0.247005 | 4.3:+1455139 | MS.gene020509:CDS |
| CAGTTTCAGAGGAGTTGATT+TGG | 0.292075 | 4.3:+1453905 | MS.gene020509:CDS |
| CCAGGTCTACCATGCTTAAC+AGG | 0.341486 | 4.3:-1455250 | None:intergenic |
| TCAGTGCTCGTGCTCGTAGA+AGG | 0.367007 | 4.3:+1453970 | MS.gene020509:CDS |
| TTCTTGAATGTTCTCTTCTT+CGG | 0.377124 | 4.3:-1453879 | None:intergenic |
| AGATGGGTCCTAACAGGTTC+GGG | 0.405557 | 4.3:-1455094 | None:intergenic |
| GTGAGAAGCCCGAACCTGTT+AGG | 0.409377 | 4.3:+1455086 | MS.gene020509:CDS |
| GATGCAGCAGCCGCCGCCGC+GGG | 0.422266 | 4.3:+1453852 | MS.gene020509:CDS |
| TTACGAAGATGGGTCCTAAC+AGG | 0.435557 | 4.3:-1455100 | None:intergenic |
| AAGATGGGTCCTAACAGGTT+CGG | 0.450751 | 4.3:-1455095 | None:intergenic |
| CAATGATCATGTTACGAAGA+TGG | 0.465315 | 4.3:-1455111 | None:intergenic |
| ATCATTGTACCTGAGATGAT+TGG | 0.468347 | 4.3:+1455127 | MS.gene020509:CDS |
| TTCAAGAAGTTCAGTTTCAG+AGG | 0.481387 | 4.3:+1453894 | MS.gene020509:CDS |
| AGGTAATGACCGATCATCTC+AGG | 0.492365 | 4.3:-1455202 | None:intergenic |
| CCTGTTAAGCATGGTAGACC+TGG | 0.509940 | 4.3:+1455250 | MS.gene020509:CDS |
| AATGATCATGTTACGAAGAT+GGG | 0.516658 | 4.3:-1455110 | None:intergenic |
| GCATTATTGGAGTGTACAAT+GGG | 0.517140 | 4.3:+1455152 | MS.gene020509:CDS |
| ACAGGTTCGGGCTTCTCACC+AGG | 0.517899 | 4.3:-1455082 | None:intergenic |
| CTTCGGTACTCCCGCGGCGG+CGG | 0.518043 | 4.3:-1453862 | None:intergenic |
| TTGGTGCTACTCACTCCTCC+AGG | 0.521787 | 4.3:+1455275 | MS.gene020509:CDS |
| ATAATGCTCCCAATCATCTC+AGG | 0.528225 | 4.3:-1455136 | None:intergenic |
| TCATTGTACCTGAGATGATT+GGG | 0.539509 | 4.3:+1455128 | MS.gene020509:CDS |
| GCTTACGAGTGAGACCTCTC+TGG | 0.541580 | 4.3:-1453995 | None:intergenic |
| TCTCAGGTTTGATTTCAACT+TGG | 0.546765 | 4.3:-1455186 | None:intergenic |
| AGCATTATTGGAGTGTACAA+TGG | 0.558872 | 4.3:+1455151 | MS.gene020509:CDS |
| TAGAAAAGGGAGGCACCACC+TGG | 0.561975 | 4.3:+1455064 | MS.gene020509:intron |
| TCACTTGAGAGGAATGAACC+TGG | 0.566509 | 4.3:-1455293 | None:intergenic |
| AGATGCAGCAGCCGCCGCCG+CGG | 0.579389 | 4.3:+1453851 | MS.gene020509:CDS |
| GAGTGAGTAGCACCAATACC+AGG | 0.584094 | 4.3:-1455268 | None:intergenic |
| GAAATCAAACCTGAGATGAT+CGG | 0.585387 | 4.3:+1455193 | MS.gene020509:CDS |
| AAGCATGGTAGACCTGGTAT+TGG | 0.586812 | 4.3:+1455256 | MS.gene020509:CDS |
| TCATACAAGCCTGTTAAGCA+TGG | 0.604339 | 4.3:+1455241 | MS.gene020509:CDS |
| GAGCTTAACAAGCTCATCAG+TGG | 0.607114 | 4.3:-1453946 | None:intergenic |
| AGGTCTCACTCGTAAGCCCA+TGG | 0.623580 | 4.3:+1454001 | MS.gene020509:CDS |
| AACAAGGTGATTCACTTGAG+AGG | 0.631770 | 4.3:-1455304 | None:intergenic |
| ATGAGATCGAGAATTCAGCT+AGG | 0.682732 | 4.3:-1455222 | None:intergenic |
| GGTTCGGGCTTCTCACCAGG+TGG | 0.683492 | 4.3:-1455079 | None:intergenic |
| TCTCTTCTTCGGTACTCCCG+CGG | 0.697626 | 4.3:-1453868 | None:intergenic |
| CTTCTTCGGTACTCCCGCGG+CGG | 0.700206 | 4.3:-1453865 | None:intergenic |
| GAATTGGTTGTAGAAAAGGG+AGG | 0.733330 | 4.3:+1455054 | MS.gene020509:intron |
| CTTGAGAGGAATGAACCTGG+AGG | 0.737810 | 4.3:-1455290 | None:intergenic |
| GCTCGTAGAAGGTTCCAGAG+AGG | 0.763484 | 4.3:+1453981 | MS.gene020509:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTACTATTTTACAAATTTA+AGG | - | chr4.3:1454187-1454206 | None:intergenic | 10.0% |
| !! | ATTACTATTATGCAAATTTA+AGG | - | chr4.3:1454502-1454521 | None:intergenic | 15.0% |
| !!! | AAAAAAAAGTGTTCAATTTA+AGG | - | chr4.3:1454531-1454550 | None:intergenic | 15.0% |
| !!! | AAAAAAAGTGTTCAATTTAA+GGG | - | chr4.3:1454530-1454549 | None:intergenic | 15.0% |
| !!! | ATTGTTATAATTTTGTGAAT+TGG | + | chr4.3:1455038-1455057 | MS.gene020509:intron | 15.0% |
| !!! | GAACACTTTTTTTTTTTTTT+TGG | + | chr4.3:1454537-1454556 | MS.gene020509:intron | 15.0% |
| !!! | TTTGTTATTCTTTTATTTAG+TGG | + | chr4.3:1454674-1454693 | MS.gene020509:intron | 15.0% |
| !!! | TTTGTTATTTTGTTAATTTG+AGG | + | chr4.3:1454436-1454455 | MS.gene020509:intron | 15.0% |
| !! | AAGGAACTAAATTGATATAT+TGG | - | chr4.3:1454483-1454502 | None:intergenic | 20.0% |
| !! | ATATGCAAAATACTAACAAT+TGG | + | chr4.3:1454158-1454177 | MS.gene020509:intron | 20.0% |
| !! | ATTCCAAATTCAAATTCAAT+CGG | - | chr4.3:1453805-1453824 | None:intergenic | 20.0% |
| !! | TATGCAAAATACTAACAATT+GGG | + | chr4.3:1454159-1454178 | MS.gene020509:intron | 20.0% |
| !! | TTTAGTACTTAAGATAGTAA+GGG | - | chr4.3:1455006-1455025 | None:intergenic | 20.0% |
| !!! | GAAGTTTTTATTGATTTTGT+TGG | + | chr4.3:1454610-1454629 | MS.gene020509:intron | 20.0% |
| !!! | GTTAGTATTTTGCATATTAA+AGG | - | chr4.3:1454155-1454174 | None:intergenic | 20.0% |
| !!! | TGGTGGTTTTTTAAATTTAA+AGG | + | chr4.3:1454937-1454956 | MS.gene020509:intron | 20.0% |
| !!! | TTGTTAATTTGTGAATTTGA+GGG | + | chr4.3:1454966-1454985 | MS.gene020509:intron | 20.0% |
| !!! | TTTGTTAATTTGTGAATTTG+AGG | + | chr4.3:1454965-1454984 | MS.gene020509:intron | 20.0% |
| !!! | TTTTAGTACTTAAGATAGTA+AGG | - | chr4.3:1455007-1455026 | None:intergenic | 20.0% |
| ! | AAATCCATGTTAGATTCTAT+CGG | - | chr4.3:1453782-1453801 | None:intergenic | 25.0% |
| ! | AACATGAAACCATTAAAATG+GGG | - | chr4.3:1454278-1454297 | None:intergenic | 25.0% |
| ! | AATAGCGATATTTAGGTATA+GGG | + | chr4.3:1454903-1454922 | MS.gene020509:intron | 25.0% |
| ! | AGTAATTGCATACCAAAAAT+TGG | + | chr4.3:1454201-1454220 | MS.gene020509:intron | 25.0% |
| ! | ATTTAACACTACCATTCTAA+AGG | + | chr4.3:1454801-1454820 | MS.gene020509:intron | 25.0% |
| ! | GAACATGAAACCATTAAAAT+GGG | - | chr4.3:1454279-1454298 | None:intergenic | 25.0% |
| ! | TGAACATGAAACCATTAAAA+TGG | - | chr4.3:1454280-1454299 | None:intergenic | 25.0% |
| ! | TTTCCGATTGAATTTGAATT+TGG | + | chr4.3:1453799-1453818 | MS.gene020509:intron | 25.0% |
| !! | AAACAACAATCTTAGCATTT+TGG | + | chr4.3:1454112-1454131 | MS.gene020509:intron | 25.0% |
| !! | AACAACAATCTTAGCATTTT+GGG | + | chr4.3:1454113-1454132 | MS.gene020509:intron | 25.0% |
| !! | AGGACTAACATCAAAATTTT+TGG | - | chr4.3:1454712-1454731 | None:intergenic | 25.0% |
| !! | ATATGACATTGTCCAATTTT+TGG | - | chr4.3:1454216-1454235 | None:intergenic | 25.0% |
| !! | CTGAAGATATATTTTCATTG+AGG | + | chr4.3:1454382-1454401 | MS.gene020509:intron | 25.0% |
| !! | GTGCTAATTTGCAAATATAA+AGG | - | chr4.3:1454732-1454751 | None:intergenic | 25.0% |
| !! | TTTGATTTCAACTTGGTTAA+AGG | - | chr4.3:1455182-1455201 | None:intergenic | 25.0% |
| !!! | AATTTGGAATTGAATTTTGC+AGG | + | chr4.3:1453815-1453834 | MS.gene020509:intron | 25.0% |
| !!! | CTCTTGTTGATTATTGATTT+TGG | + | chr4.3:1454349-1454368 | MS.gene020509:intron | 25.0% |
| !!! | GAAATTGATTGCTGTTTTTA+GGG | + | chr4.3:1454408-1454427 | MS.gene020509:intron | 25.0% |
| !!! | TGTTGATTATTGATTTTGGT+GGG | + | chr4.3:1454353-1454372 | MS.gene020509:intron | 25.0% |
| !!! | TTGTTGATTATTGATTTTGG+TGG | + | chr4.3:1454352-1454371 | MS.gene020509:intron | 25.0% |
| AAGGCATATAACCTTCAAAA+TGG | - | chr4.3:1454576-1454595 | None:intergenic | 30.0% | |
| AATGATCATGTTACGAAGAT+GGG | - | chr4.3:1455113-1455132 | None:intergenic | 30.0% | |
| ACTTCCATGTAAACTTGAAA+AGG | - | chr4.3:1454595-1454614 | None:intergenic | 30.0% | |
| ATTTCCGATAGAATCTAACA+TGG | + | chr4.3:1453775-1453794 | MS.gene020509:intron | 30.0% | |
| CTTACTGAATAGCGATATTT+AGG | + | chr4.3:1454896-1454915 | MS.gene020509:intron | 30.0% | |
| GAATAGCGATATTTAGGTAT+AGG | + | chr4.3:1454902-1454921 | MS.gene020509:intron | 30.0% | |
| TGTGAATTGGTTGTAGAAAA+GGG | + | chr4.3:1455051-1455070 | MS.gene020509:intron | 30.0% | |
| TTCTTGAATGTTCTCTTCTT+CGG | - | chr4.3:1453882-1453901 | None:intergenic | 30.0% | |
| TTGTGAATTGGTTGTAGAAA+AGG | + | chr4.3:1455050-1455069 | MS.gene020509:intron | 30.0% | |
| ! | ACTTTAGTACCCCATTTTAA+TGG | + | chr4.3:1454266-1454285 | MS.gene020509:intron | 30.0% |
| ! | TTAAAATGGGGTACTAAAGT+CGG | - | chr4.3:1454266-1454285 | None:intergenic | 30.0% |
| !!! | CGAAATTGATTGCTGTTTTT+AGG | + | chr4.3:1454407-1454426 | MS.gene020509:intron | 30.0% |
| !!! | TATGCCTTTTCAAGTTTACA+TGG | + | chr4.3:1454588-1454607 | MS.gene020509:intron | 30.0% |
| AGCATTATTGGAGTGTACAA+TGG | + | chr4.3:1455151-1455170 | MS.gene020509:CDS | 35.0% | |
| ATAGGGACTAAATTGATTGG+TGG | + | chr4.3:1454920-1454939 | MS.gene020509:intron | 35.0% | |
| ATCATTGTACCTGAGATGAT+TGG | + | chr4.3:1455127-1455146 | MS.gene020509:CDS | 35.0% | |
| ATCGGAAATCAAGTTTCAGA+AGG | - | chr4.3:1453764-1453783 | None:intergenic | 35.0% | |
| CAATGATCATGTTACGAAGA+TGG | - | chr4.3:1455114-1455133 | None:intergenic | 35.0% | |
| GAAATCAAACCTGAGATGAT+CGG | + | chr4.3:1455193-1455212 | MS.gene020509:CDS | 35.0% | |
| GCATATAACCTTCAAAATGG+TGG | - | chr4.3:1454573-1454592 | None:intergenic | 35.0% | |
| GCATTATTGGAGTGTACAAT+GGG | + | chr4.3:1455152-1455171 | MS.gene020509:CDS | 35.0% | |
| GGTATAGGGACTAAATTGAT+TGG | + | chr4.3:1454917-1454936 | MS.gene020509:intron | 35.0% | |
| GTGACTCAGTGTTCAAATTA+AGG | - | chr4.3:1454762-1454781 | None:intergenic | 35.0% | |
| TCATTGTACCTGAGATGATT+GGG | + | chr4.3:1455128-1455147 | MS.gene020509:CDS | 35.0% | |
| TTCAAGAAGTTCAGTTTCAG+AGG | + | chr4.3:1453894-1453913 | MS.gene020509:CDS | 35.0% | |
| ! | ACGCATGTAAACCTTTAGAA+TGG | - | chr4.3:1454815-1454834 | None:intergenic | 35.0% |
| ! | CAAAGTTACCACCATTTTGA+AGG | + | chr4.3:1454562-1454581 | MS.gene020509:intron | 35.0% |
| ! | TCTCAGGTTTGATTTCAACT+TGG | - | chr4.3:1455189-1455208 | None:intergenic | 35.0% |
| ATAATGCTCCCAATCATCTC+AGG | - | chr4.3:1455139-1455158 | None:intergenic | 40.0% | |
| ATGAGATCGAGAATTCAGCT+AGG | - | chr4.3:1455225-1455244 | None:intergenic | 40.0% | |
| CATCAAAAAGCTTCGCAAAG+CGG | + | chr4.3:1454028-1454047 | MS.gene020509:CDS | 40.0% | |
| GAATTGGTTGTAGAAAAGGG+AGG | + | chr4.3:1455054-1455073 | MS.gene020509:intron | 40.0% | |
| TCATACAAGCCTGTTAAGCA+TGG | + | chr4.3:1455241-1455260 | MS.gene020509:CDS | 40.0% | |
| ! | AAGCTTTTTGATGAGAGCCA+TGG | - | chr4.3:1454021-1454040 | None:intergenic | 40.0% |
| ! | AGCTTTTTGATGAGAGCCAT+GGG | - | chr4.3:1454020-1454039 | None:intergenic | 40.0% |
| ! | CAGTTTCAGAGGAGTTGATT+TGG | + | chr4.3:1453905-1453924 | MS.gene020509:CDS | 40.0% |
| !! | GAGATGATTGGGAGCATTAT+TGG | + | chr4.3:1455139-1455158 | MS.gene020509:CDS | 40.0% |
| AAGATGGGTCCTAACAGGTT+CGG | - | chr4.3:1455098-1455117 | None:intergenic | 45.0% | |
| AAGCATGGTAGACCTGGTAT+TGG | + | chr4.3:1455256-1455275 | MS.gene020509:CDS | 45.0% | |
| AGGTAATGACCGATCATCTC+AGG | - | chr4.3:1455205-1455224 | None:intergenic | 45.0% | |
| GAGCTTAACAAGCTCATCAG+TGG | - | chr4.3:1453949-1453968 | None:intergenic | 45.0% | |
| TCACTTGAGAGGAATGAACC+TGG | - | chr4.3:1455296-1455315 | None:intergenic | 45.0% | |
| TTACGAAGATGGGTCCTAAC+AGG | - | chr4.3:1455103-1455122 | None:intergenic | 45.0% | |
| ! | AATTTTGCAGGCAGACGTTG+AGG | + | chr4.3:1453827-1453846 | MS.gene020509:intron | 45.0% |
| !! | ATAAATAAAAGAAATAAAAA+TGG | - | chr4.3:1454069-1454088 | None:intergenic | 5.0% |
| !! | TAAATAAAAGAAATAAAAAT+GGG | - | chr4.3:1454068-1454087 | None:intergenic | 5.0% |
| AGATGGGTCCTAACAGGTTC+GGG | - | chr4.3:1455097-1455116 | None:intergenic | 50.0% | |
| CCAGGTCTACCATGCTTAAC+AGG | - | chr4.3:1455253-1455272 | None:intergenic | 50.0% | |
| CCTGTTAAGCATGGTAGACC+TGG | + | chr4.3:1455250-1455269 | MS.gene020509:CDS | 50.0% | |
| CTTGAGAGGAATGAACCTGG+AGG | - | chr4.3:1455293-1455312 | None:intergenic | 50.0% | |
| GAGTGAGTAGCACCAATACC+AGG | - | chr4.3:1455271-1455290 | None:intergenic | 50.0% | |
| AGGTCTCACTCGTAAGCCCA+TGG | + | chr4.3:1454001-1454020 | MS.gene020509:CDS | 55.0% | |
| GCTCGTAGAAGGTTCCAGAG+AGG | + | chr4.3:1453981-1454000 | MS.gene020509:CDS | 55.0% | |
| GCTTACGAGTGAGACCTCTC+TGG | - | chr4.3:1453998-1454017 | None:intergenic | 55.0% | |
| GTGAGAAGCCCGAACCTGTT+AGG | + | chr4.3:1455086-1455105 | MS.gene020509:CDS | 55.0% | |
| TCAGTGCTCGTGCTCGTAGA+AGG | + | chr4.3:1453970-1453989 | MS.gene020509:CDS | 55.0% | |
| TCTCTTCTTCGGTACTCCCG+CGG | - | chr4.3:1453871-1453890 | None:intergenic | 55.0% | |
| !! | TAGAAAAGGGAGGCACCACC+TGG | + | chr4.3:1455064-1455083 | MS.gene020509:intron | 55.0% |
| !! | TTGGTGCTACTCACTCCTCC+AGG | + | chr4.3:1455275-1455294 | MS.gene020509:CDS | 55.0% |
| ACAGGTTCGGGCTTCTCACC+AGG | - | chr4.3:1455085-1455104 | None:intergenic | 60.0% | |
| CTTCTTCGGTACTCCCGCGG+CGG | - | chr4.3:1453868-1453887 | None:intergenic | 65.0% | |
| GGTTCGGGCTTCTCACCAGG+TGG | - | chr4.3:1455082-1455101 | None:intergenic | 65.0% | |
| AGATGCAGCAGCCGCCGCCG+CGG | + | chr4.3:1453851-1453870 | MS.gene020509:CDS | 75.0% | |
| CTTCGGTACTCCCGCGGCGG+CGG | - | chr4.3:1453865-1453884 | None:intergenic | 75.0% | |
| ! | GATGCAGCAGCCGCCGCCGC+GGG | + | chr4.3:1453852-1453871 | MS.gene020509:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 1453745 | 1455315 | 1453745 | ID=MS.gene020509 |
| chr4.3 | mRNA | 1453745 | 1455315 | 1453745 | ID=MS.gene020509.t1;Parent=MS.gene020509 |
| chr4.3 | exon | 1453745 | 1453747 | 1453745 | ID=MS.gene020509.t1.exon1;Parent=MS.gene020509.t1 |
| chr4.3 | CDS | 1453745 | 1453747 | 1453745 | ID=cds.MS.gene020509.t1;Parent=MS.gene020509.t1 |
| chr4.3 | exon | 1453837 | 1454049 | 1453837 | ID=MS.gene020509.t1.exon2;Parent=MS.gene020509.t1 |
| chr4.3 | CDS | 1453837 | 1454049 | 1453837 | ID=cds.MS.gene020509.t1;Parent=MS.gene020509.t1 |
| chr4.3 | exon | 1455067 | 1455315 | 1455067 | ID=MS.gene020509.t1.exon3;Parent=MS.gene020509.t1 |
| chr4.3 | CDS | 1455067 | 1455315 | 1455067 | ID=cds.MS.gene020509.t1;Parent=MS.gene020509.t1 |
| Gene Sequence |
| Protein sequence |
