AlfalfaGEDB | MS.gene60717

M. sativa cultivar XinJiangDaYe / MS.gene60717

KEGG: K02964
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0097159 GO:0110165 GO:1901363 GO:1901564 GO:1901566 GO:1901576
PFAM: PF00416.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60717.t1	XP_003592049.1	100	152	0	0	1	152	1	152	1.40E-79	305.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60717.t1	P34788	92.8	152	11	0	1	152	1	152	3.3e-77	288.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60717.t1	B7FMJ8	100.0	152	0	0	1	152	1	152	1.0e-79	305.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049140	MS.gene60717	0.808402	3.15E-50	-1.69E-46
MS.gene049341	MS.gene60717	0.807643	4.57E-50	-1.69E-46
MS.gene049411	MS.gene60717	0.806712	7.20E-50	-1.69E-46
MS.gene049580	MS.gene60717	0.818676	1.73E-52	-1.69E-46
MS.gene050277	MS.gene60717	0.869926	2.15E-66	-1.69E-46
MS.gene050320	MS.gene60717	0.823178	1.59E-53	-1.69E-46
MS.gene050437	MS.gene60717	0.801542	8.57E-49	-1.69E-46
MS.gene050752	MS.gene60717	0.855535	5.91E-62	-1.69E-46
MS.gene050838	MS.gene60717	0.873528	1.37E-67	-1.69E-46
MS.gene050955	MS.gene60717	0.854406	1.26E-61	-1.69E-46
MS.gene051003	MS.gene60717	0.804763	1.85E-49	-1.69E-46
MS.gene051033	MS.gene60717	-0.809585	1.76E-50	-1.69E-46
MS.gene051063	MS.gene60717	0.838078	3.56E-57	-1.69E-46
MS.gene051234	MS.gene60717	0.815537	8.79E-52	-1.69E-46
MS.gene051330	MS.gene60717	0.830255	3.25E-55	-1.69E-46
MS.gene05134	MS.gene60717	0.838793	2.33E-57	-1.69E-46
MS.gene051451	MS.gene60717	0.818955	1.50E-52	-1.69E-46
MS.gene051633	MS.gene60717	0.802335	5.89E-49	-1.69E-46
MS.gene051687	MS.gene60717	0.818294	2.11E-52	-1.69E-46
MS.gene051746	MS.gene60717	0.886075	4.69E-72	-1.69E-46
MS.gene051748	MS.gene60717	0.875687	2.53E-68	-1.69E-46
MS.gene051756	MS.gene60717	0.836263	1.04E-56	-1.69E-46
MS.gene051850	MS.gene60717	0.840521	8.27E-58	-1.69E-46
MS.gene051885	MS.gene60717	0.801484	8.81E-49	-1.69E-46
MS.gene051903	MS.gene60717	0.923867	1.51E-89	-1.69E-46
MS.gene052133	MS.gene60717	0.810271	1.25E-50	-1.69E-46
MS.gene052479	MS.gene60717	0.836771	7.70E-57	-1.69E-46
MS.gene052818	MS.gene60717	-0.816815	4.55E-52	-1.69E-46
MS.gene052947	MS.gene60717	0.918592	1.29E-86	-1.69E-46
MS.gene053109	MS.gene60717	0.831561	1.56E-55	-1.69E-46
MS.gene053952	MS.gene60717	0.865818	4.48E-65	-1.69E-46
MS.gene054250	MS.gene60717	0.803877	2.83E-49	-1.69E-46
MS.gene054403	MS.gene60717	0.855824	4.87E-62	-1.69E-46
MS.gene05469	MS.gene60717	0.813724	2.21E-51	-1.69E-46
MS.gene054937	MS.gene60717	0.853549	2.22E-61	-1.69E-46
MS.gene055162	MS.gene60717	0.835696	1.44E-56	-1.69E-46
MS.gene055424	MS.gene60717	0.828341	9.49E-55	-1.69E-46
MS.gene055555	MS.gene60717	0.853899	1.76E-61	-1.69E-46
MS.gene056075	MS.gene60717	0.883349	4.84E-71	-1.69E-46
MS.gene056601	MS.gene60717	0.847188	1.35E-59	-1.69E-46
MS.gene056631	MS.gene60717	0.86282	3.86E-64	-1.69E-46
MS.gene057057	MS.gene60717	0.8446	6.84E-59	-1.69E-46
MS.gene057094	MS.gene60717	0.878979	1.81E-69	-1.69E-46
MS.gene057234	MS.gene60717	0.875455	3.04E-68	-1.69E-46
MS.gene057694	MS.gene60717	0.814136	1.80E-51	-1.69E-46
MS.gene057705	MS.gene60717	0.872441	3.17E-67	-1.69E-46
MS.gene05781	MS.gene60717	0.800477	1.42E-48	-1.69E-46
MS.gene057999	MS.gene60717	0.81379	2.14E-51	-1.69E-46
MS.gene058055	MS.gene60717	0.831107	2.01E-55	-1.69E-46
MS.gene058074	MS.gene60717	0.851142	1.08E-60	-1.69E-46
MS.gene058238	MS.gene60717	0.845677	3.50E-59	-1.69E-46
MS.gene058852	MS.gene60717	0.819955	8.85E-53	-1.69E-46
MS.gene058906	MS.gene60717	0.839051	2.00E-57	-1.69E-46
MS.gene059171	MS.gene60717	0.80906	2.28E-50	-1.69E-46
MS.gene059227	MS.gene60717	0.837744	4.34E-57	-1.69E-46
MS.gene059898	MS.gene60717	0.835502	1.62E-56	-1.69E-46
MS.gene06001	MS.gene60717	0.8958	6.79E-76	-1.69E-46
MS.gene06011	MS.gene60717	0.834119	3.60E-56	-1.69E-46
MS.gene060429	MS.gene60717	0.809275	2.05E-50	-1.69E-46
MS.gene060763	MS.gene60717	0.836905	7.11E-57	-1.69E-46
MS.gene060917	MS.gene60717	0.870578	1.31E-66	-1.69E-46
MS.gene061145	MS.gene60717	0.803105	4.09E-49	-1.69E-46
MS.gene06118	MS.gene60717	0.823927	1.06E-53	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene60717	MS.gene80490	PPI
MS.gene003409	MS.gene60717	PPI
MS.gene60717	MS.gene073888	PPI
MS.gene006126	MS.gene60717	PPI
MS.gene60717	MS.gene048789	PPI
MS.gene72163	MS.gene60717	PPI
MS.gene60717	MS.gene023799	PPI
MS.gene60717	MS.gene72768	PPI
MS.gene60717	MS.gene070323	PPI
MS.gene60717	MS.gene015671	PPI
MS.gene60717	MS.gene020507	PPI
MS.gene60717	MS.gene60716	PPI
MS.gene052666	MS.gene60717	PPI
MS.gene03522	MS.gene60717	PPI
MS.gene60717	MS.gene82426	PPI
MS.gene60717	MS.gene028153	PPI
MS.gene60717	MS.gene97614	PPI
MS.gene60717	MS.gene030418	PPI
MS.gene42236	MS.gene60717	PPI
MS.gene60717	MS.gene39902	PPI
MS.gene020509	MS.gene60717	PPI
MS.gene60717	MS.gene03522	PPI
MS.gene60717	MS.gene88892	PPI
MS.gene53517	MS.gene60717	PPI
MS.gene60717	MS.gene054292	PPI
MS.gene28960	MS.gene60717	PPI
MS.gene60717	MS.gene053443	PPI
MS.gene60717	MS.gene006122	PPI
MS.gene60717	MS.gene49338	PPI
MS.gene054292	MS.gene60717	PPI
MS.gene60717	MS.gene83444	PPI
MS.gene60717	MS.gene006123	PPI
MS.gene27648	MS.gene60717	PPI
MS.gene60717	MS.gene52173	PPI
MS.gene60717	MS.gene052272	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60717.t1	MTR_1g098170	100.000	152	0	0	1	152	1	152	6.47e-112	314
MS.gene60717.t1	MTR_1g098220	100.000	152	0	0	1	152	1	152	6.47e-112	314
MS.gene60717.t1	MTR_6g043210	98.684	152	2	0	1	152	1	152	6.70e-111	311
MS.gene60717.t1	MTR_1g492710	97.945	146	3	0	1	146	794	939	1.21e-97	303
MS.gene60717.t1	MTR_1g098220	99.160	119	1	0	1	119	1	119	2.71e-84	243
MS.gene60717.t1	MTR_5g027650	95.098	102	5	0	39	140	11	112	7.93e-69	203
MS.gene60717.t1	MTR_5g027580	93.137	102	7	0	39	140	48	149	7.08e-68	202
MS.gene60717.t1	MTR_5g027670	94.382	89	5	0	52	140	1	89	2.79e-58	176
MS.gene60717.t1	MTR_5g027615	94.382	89	5	0	52	140	1	89	7.00e-58	175
MS.gene60717.t1	MTR_5g027605	94.382	89	5	0	52	140	1	89	7.00e-58	175
MS.gene60717.t1	MTR_5g027640	94.382	89	5	0	52	140	1	89	7.00e-58	175
MS.gene60717.t1	MTR_5g027600	94.382	89	5	0	52	140	1	89	7.00e-58	175
MS.gene60717.t1	MTR_1005s0010	94.186	86	5	0	55	140	2	87	2.51e-56	171
MS.gene60717.t1	MTR_4g015960	70.270	74	15	2	68	137	10	80	2.32e-27	106

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60717.t1	AT4G09800	92.763	152	11	1	152	1	152	1.89e-105	298
MS.gene60717.t1	AT1G34030	92.763	152	11	1	152	1	152	1.89e-105	298
MS.gene60717.t1	AT1G22780	92.763	152	11	1	152	1	152	1.89e-105	298

Find 36 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATGAAGTTGAGAGATGATT+TGG	0.279609	1.2:-71168215	MS.gene60717:CDS
CAACTTCATGTCGAGTTGAT+TGG	0.309472	1.2:+71168228	None:intergenic
TCCCCTGCGGCCTGTAGTCT+TGG	0.394682	1.2:+71167209	None:intergenic
TTCTGTTATGCAGTAATCAC+CGG	0.438670	1.2:-71167275	MS.gene60717:intron
GTGTTGAACACAAATGTTGA+TGG	0.456259	1.2:-71168638	MS.gene60717:CDS
TACTGGGGCCTTCGTGTTCG+TGG	0.457512	1.2:-71167240	MS.gene60717:CDS
TGATTGAGGTCATTGCGAAC+TGG	0.463060	1.2:+71168603	None:intergenic
CCGGGGTTTGAGACACTACT+GGG	0.483703	1.2:-71167256	MS.gene60717:CDS
GTTCGCAATGACCTCAATCA+AGG	0.484324	1.2:-71168600	MS.gene60717:CDS
CAAGGATGGCAAATTCTCTC+AGG	0.484690	1.2:-71168257	MS.gene60717:CDS
ACCGGGGTTTGAGACACTAC+TGG	0.492415	1.2:-71167257	MS.gene60717:CDS
ATGACCTCAATCAAGGGTAT+TGG	0.493197	1.2:-71168593	MS.gene60717:CDS
GTCAATTCAAGGTTCCAGAT+TGG	0.495981	1.2:-71168303	MS.gene60717:CDS
TGGAGAGACTCAAGAAGATC+CGG	0.512286	1.2:-71168195	MS.gene60717:intron
TGCAAATCCTCGTCAATTCA+AGG	0.522315	1.2:-71168314	MS.gene60717:CDS
CCCAGTAGTGTCTCAAACCC+CGG	0.525189	1.2:+71167256	None:intergenic
GAACAGAAAGAAGGATTACA+AGG	0.525479	1.2:-71168275	MS.gene60717:CDS
TGATGTGTTATAGTCTTTGG+TGG	0.546379	1.2:-71168690	MS.gene60717:intron
TGAATTGAGTGCTGCAGAGT+TGG	0.553099	1.2:-71168356	MS.gene60717:CDS
AGAAAGAAGGATTACAAGGA+TGG	0.565673	1.2:-71168271	MS.gene60717:CDS
GGTCAGCATACCAAGACTAC+AGG	0.569467	1.2:-71167219	MS.gene60717:CDS
TACCAAGACTACAGGCCGCA+GGG	0.580402	1.2:-71167211	MS.gene60717:CDS
CTGATGTTGACATGAACAAG+AGG	0.588568	1.2:-71168538	MS.gene60717:intron
CCTACCAATACCCTTGATTG+AGG	0.590405	1.2:+71168589	None:intergenic
ATACCAAGACTACAGGCCGC+AGG	0.594524	1.2:-71167212	MS.gene60717:CDS
TCTGTTATGCAGTAATCACC+GGG	0.594587	1.2:-71167274	MS.gene60717:intron
GGCCGCAGGGGAAAGACTGT+TGG	0.608087	1.2:-71167198	MS.gene60717:CDS
GTTGGATAATATTATGACAG+TGG	0.620536	1.2:-71168338	MS.gene60717:CDS
TTCGCAATGACCTCAATCAA+GGG	0.622158	1.2:-71168599	MS.gene60717:CDS
CCTCAATCAAGGGTATTGGT+AGG	0.631523	1.2:-71168589	MS.gene60717:CDS
ACCAAGACTACAGGCCGCAG+GGG	0.654823	1.2:-71167210	MS.gene60717:CDS
TCTGGAACCTTGAATTGACG+AGG	0.669518	1.2:+71168307	None:intergenic
CTGTTATGCAGTAATCACCG+GGG	0.730953	1.2:-71167273	MS.gene60717:intron
TATGCTGACCACGAACACGA+AGG	0.739225	1.2:+71167232	None:intergenic
CACCAACAGTCTTTCCCCTG+CGG	0.740988	1.2:+71167196	None:intergenic
CGGGGTTTGAGACACTACTG+GGG	0.755067	1.2:-71167255	MS.gene60717:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATTCAATTCAATAATATAA+TGG	-	chr1.2:71168586-71168605	MS.gene60717:CDS	10.0%
!!	TTTGAGTAGTAAAAAAATAA+TGG	+	chr1.2:71168509-71168528	None:intergenic	15.0%
!!!	ATTTTTGTTGTTCAAATTAA+TGG	-	chr1.2:71167463-71167482	MS.gene60717:intron	15.0%
!!!	TGGTTTTTTTTTTTTTTTGT+TGG	-	chr1.2:71167543-71167562	MS.gene60717:intron	15.0%
!!!	TTTTTGTTGTTCAAATTAAT+GGG	-	chr1.2:71167464-71167483	MS.gene60717:intron	15.0%
!!!	TTTTTTGTTGGATTTATTTA+GGG	-	chr1.2:71167555-71167574	MS.gene60717:intron	15.0%
!!!	TTTTTTTGTTGGATTTATTT+AGG	-	chr1.2:71167554-71167573	MS.gene60717:intron	15.0%
!!	AATAAGATGAAAACAGTTTA+TGG	-	chr1.2:71168397-71168416	MS.gene60717:intron	20.0%
!!	AATACATAGTAAAAAATGCA+AGG	+	chr1.2:71168214-71168233	None:intergenic	20.0%
!!	AGTTTAAATAAATCCTATCT+GGG	-	chr1.2:71168477-71168496	MS.gene60717:intron	20.0%
!!	ATGATATTCATGTTGATATA+GGG	-	chr1.2:71168251-71168270	MS.gene60717:CDS	20.0%
!!	TAGTTTAAATAAATCCTATC+TGG	-	chr1.2:71168476-71168495	MS.gene60717:intron	20.0%
!!	TATGATATTCATGTTGATAT+AGG	-	chr1.2:71168250-71168269	MS.gene60717:CDS	20.0%
!!	TTCTGTATTCAATAATACAA+TGG	-	chr1.2:71168529-71168548	MS.gene60717:intron	20.0%
!!!	AATAATATAATGGATGTATG+TGG	-	chr1.2:71168596-71168615	MS.gene60717:CDS	20.0%
!!!	CAATAAAATTTTAGACTGTT+TGG	-	chr1.2:71168301-71168320	MS.gene60717:CDS	20.0%
!!!	TATTTTTGATGTTGTTGAAA+TGG	-	chr1.2:71167523-71167542	MS.gene60717:intron	20.0%
!	AATAATACAATGGATGTATG+TGG	-	chr1.2:71168539-71168558	MS.gene60717:CDS	25.0%
!	ACAGTTTAATTAAGCACTTA+TGG	-	chr1.2:71168328-71168347	MS.gene60717:CDS	25.0%
!	ATCATCTTTATAGTTAACAC+AGG	+	chr1.2:71167806-71167825	None:intergenic	25.0%
!	GAAAACAAAATACAAGTCAT+TGG	+	chr1.2:71168163-71168182	None:intergenic	25.0%
!	TTAACATTTCAACACTATGT+AGG	-	chr1.2:71167860-71167879	MS.gene60717:intron	25.0%
!	TTAGAACGAGAATTAACTAT+TGG	-	chr1.2:71167942-71167961	MS.gene60717:intron	25.0%
!!	TATGATTTTTAAACGTGAGA+TGG	+	chr1.2:71167505-71167524	None:intergenic	25.0%
!!!	ACTTGTATTTTGTTTTCTCT+TGG	-	chr1.2:71168166-71168185	MS.gene60717:intron	25.0%
	AATCAAATGTTTCCCATAAG+CGG	-	chr1.2:71168093-71168112	MS.gene60717:intron	30.0%
	AGATGTAGTAGTAAGATGAT+AGG	-	chr1.2:71167896-71167915	MS.gene60717:intron	30.0%
	AGTGTTTGAAAATAGAACAG+TGG	-	chr1.2:71168046-71168065	MS.gene60717:intron	30.0%
	ATGAAAACAGTTTATGGACA+TGG	-	chr1.2:71168403-71168422	MS.gene60717:intron	30.0%
	ATTTGCATAAGCAAACTGTT+TGG	+	chr1.2:71168452-71168471	None:intergenic	30.0%
	GTGTTTGAAAATAGAACAGT+GGG	-	chr1.2:71168047-71168066	MS.gene60717:intron	30.0%
	GTTGGATAATATTATGACAG+TGG	-	chr1.2:71167600-71167619	MS.gene60717:intron	30.0%
	TTGTGATGTGTTATAGTCTT+TGG	-	chr1.2:71167245-71167264	MS.gene60717:CDS	30.0%
	TTTCTGTTCAAAAACCAATC+TGG	+	chr1.2:71167652-71167671	None:intergenic	30.0%
	TTTGCATAAGCAAACTGTTT+GGG	+	chr1.2:71168451-71168470	None:intergenic	30.0%
!!	TTGGTTTTTGAACAGAAAGA+AGG	-	chr1.2:71167654-71167673	MS.gene60717:intron	30.0%
!!!	CTCAGTTGGTTTTTTAGTAT+AGG	-	chr1.2:71167831-71167850	MS.gene60717:intron	30.0%
	AAAGATGATTCTCACTCAGT+TGG	-	chr1.2:71167817-71167836	MS.gene60717:intron	35.0%
	ACAATGAAGTAGCATCTTAC+CGG	+	chr1.2:71167765-71167784	None:intergenic	35.0%
	AGAAAGAAGGATTACAAGGA+TGG	-	chr1.2:71167667-71167686	MS.gene60717:intron	35.0%
	ATGGATGTATGTGGAGAAAT+TGG	-	chr1.2:71168605-71168624	MS.gene60717:CDS	35.0%
	CATGAAGTTGAGAGATGATT+TGG	-	chr1.2:71167723-71167742	MS.gene60717:intron	35.0%
	GAACAGAAAGAAGGATTACA+AGG	-	chr1.2:71167663-71167682	MS.gene60717:intron	35.0%
	GTGATTACTGCATAACAGAA+AGG	+	chr1.2:71168663-71168682	None:intergenic	35.0%
	GTGTTGAACACAAATGTTGA+TGG	-	chr1.2:71167300-71167319	MS.gene60717:intron	35.0%
	TATGTGGAGAAATTGGTCAT+TGG	-	chr1.2:71168612-71168631	MS.gene60717:CDS	35.0%
	TGATGTGTTATAGTCTTTGG+TGG	-	chr1.2:71167248-71167267	MS.gene60717:CDS	35.0%
	TTCTGTTATGCAGTAATCAC+CGG	-	chr1.2:71168663-71168682	MS.gene60717:CDS	35.0%
	TTGCATAAGCAAACTGTTTG+GGG	+	chr1.2:71168450-71168469	None:intergenic	35.0%
!	TTGTTGGATTTATTTAGGGC+TGG	-	chr1.2:71167559-71167578	MS.gene60717:intron	35.0%
	ATAATGGCATATGCCCAGAT+AGG	+	chr1.2:71168493-71168512	None:intergenic	40.0%
	CTGATGTTGACATGAACAAG+AGG	-	chr1.2:71167400-71167419	MS.gene60717:intron	40.0%
	GAATTGGACCAAAAAGTAGC+TGG	-	chr1.2:71168130-71168149	MS.gene60717:intron	40.0%
	GGAAATACGGGCAATAGAAT+TGG	-	chr1.2:71168114-71168133	MS.gene60717:intron	40.0%
	GTCAATTCAAGGTTCCAGAT+TGG	-	chr1.2:71167635-71167654	MS.gene60717:intron	40.0%
	GTTTCCCATAAGCGGAAATA+CGG	-	chr1.2:71168101-71168120	MS.gene60717:intron	40.0%
	TCTGTTATGCAGTAATCACC+GGG	-	chr1.2:71168664-71168683	MS.gene60717:CDS	40.0%
	TGCAAATCCTCGTCAATTCA+AGG	-	chr1.2:71167624-71167643	MS.gene60717:intron	40.0%
	TTCGCAATGACCTCAATCAA+GGG	-	chr1.2:71167339-71167358	MS.gene60717:intron	40.0%
	TTTCCCATAAGCGGAAATAC+GGG	-	chr1.2:71168102-71168121	MS.gene60717:intron	40.0%
!	ATGACCTCAATCAAGGGTAT+TGG	-	chr1.2:71167345-71167364	MS.gene60717:intron	40.0%
!!	CAACTTCATGTCGAGTTGAT+TGG	+	chr1.2:71167713-71167732	None:intergenic	40.0%
!!	CGTTCTAAAGCATCAAGCAA+TGG	+	chr1.2:71167930-71167949	None:intergenic	40.0%
!!!	GATAAGAGCCAGCTACTTTT+TGG	+	chr1.2:71168141-71168160	None:intergenic	40.0%
	ACACGATCAAAGCAATGCAG+TGG	+	chr1.2:71168004-71168023	None:intergenic	45.0%
	ATTGCCCGTATTTCCGCTTA+TGG	+	chr1.2:71168109-71168128	None:intergenic	45.0%
	CAAGGATGGCAAATTCTCTC+AGG	-	chr1.2:71167681-71167700	MS.gene60717:intron	45.0%
	CCTACCAATACCCTTGATTG+AGG	+	chr1.2:71167352-71167371	None:intergenic	45.0%
	CTGTTATGCAGTAATCACCG+GGG	-	chr1.2:71168665-71168684	MS.gene60717:CDS	45.0%
	GTTCGCAATGACCTCAATCA+AGG	-	chr1.2:71167338-71167357	MS.gene60717:intron	45.0%
	TGATTGAGGTCATTGCGAAC+TGG	+	chr1.2:71167338-71167357	None:intergenic	45.0%
	TGGAGAAATTGGTCATTGGC+TGG	-	chr1.2:71168616-71168635	MS.gene60717:CDS	45.0%
	TGGAGAGACTCAAGAAGATC+CGG	-	chr1.2:71167743-71167762	MS.gene60717:intron	45.0%
	TTGCCCGTATTTCCGCTTAT+GGG	+	chr1.2:71168108-71168127	None:intergenic	45.0%
!	TCTGGAACCTTGAATTGACG+AGG	+	chr1.2:71167634-71167653	None:intergenic	45.0%
!	TGAATTGAGTGCTGCAGAGT+TGG	-	chr1.2:71167582-71167601	MS.gene60717:intron	45.0%
!!	CCTCAATCAAGGGTATTGGT+AGG	-	chr1.2:71167349-71167368	MS.gene60717:intron	45.0%
	CGATCAAAGCAATGCAGTGG+TGG	+	chr1.2:71168001-71168020	None:intergenic	50.0%
	GGTCAGCATACCAAGACTAC+AGG	-	chr1.2:71168719-71168738	MS.gene60717:intron	50.0%
	TATGCTGACCACGAACACGA+AGG	+	chr1.2:71168709-71168728	None:intergenic	50.0%
	ATACCAAGACTACAGGCCGC+AGG	-	chr1.2:71168726-71168745	MS.gene60717:intron	55.0%
	CACCAACAGTCTTTCCCCTG+CGG	+	chr1.2:71168745-71168764	None:intergenic	55.0%
	CCCAGTAGTGTCTCAAACCC+CGG	+	chr1.2:71168685-71168704	None:intergenic	55.0%
	TACCAAGACTACAGGCCGCA+GGG	-	chr1.2:71168727-71168746	MS.gene60717:intron	55.0%
!	ACCGGGGTTTGAGACACTAC+TGG	-	chr1.2:71168681-71168700	MS.gene60717:intron	55.0%
!	ATGCAGTGGTGGTGCATCAG+CGG	+	chr1.2:71167990-71168009	None:intergenic	55.0%
!	CCGGGGTTTGAGACACTACT+GGG	-	chr1.2:71168682-71168701	MS.gene60717:intron	55.0%
!	CGGGGTTTGAGACACTACTG+GGG	-	chr1.2:71168683-71168702	MS.gene60717:intron	55.0%
	ACCAAGACTACAGGCCGCAG+GGG	-	chr1.2:71168728-71168747	MS.gene60717:intron	60.0%
	TACTGGGGCCTTCGTGTTCG+TGG	-	chr1.2:71168698-71168717	MS.gene60717:intron	60.0%
	GGCCGCAGGGGAAAGACTGT+TGG	-	chr1.2:71168740-71168759	MS.gene60717:intron	65.0%
	TCCCCTGCGGCCTGTAGTCT+TGG	+	chr1.2:71168732-71168751	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	71167179	71168781	71167179	ID=MS.gene60717
chr1.2	mRNA	71167179	71168781	71167179	ID=MS.gene60717.t1;Parent=MS.gene60717
chr1.2	exon	71168779	71168781	71168779	ID=MS.gene60717.t1.exon1;Parent=MS.gene60717.t1
chr1.2	CDS	71168779	71168781	71168779	ID=cds.MS.gene60717.t1;Parent=MS.gene60717.t1
chr1.2	exon	71168539	71168699	71168539	ID=MS.gene60717.t1.exon2;Parent=MS.gene60717.t1
chr1.2	CDS	71168539	71168699	71168539	ID=cds.MS.gene60717.t1;Parent=MS.gene60717.t1
chr1.2	exon	71168196	71168384	71168196	ID=MS.gene60717.t1.exon3;Parent=MS.gene60717.t1
chr1.2	CDS	71168196	71168384	71168196	ID=cds.MS.gene60717.t1;Parent=MS.gene60717.t1
chr1.2	exon	71167179	71167284	71167179	ID=MS.gene60717.t1.exon4;Parent=MS.gene60717.t1
chr1.2	CDS	71167179	71167284	71167179	ID=cds.MS.gene60717.t1;Parent=MS.gene60717.t1

Gene Sequence

>MS.gene60717

ATGGTATGTTTTCGATCTCGATTTCATCTCGATGTAGCTGCTTAATCGCTGATTCTGTTTTTTTTTTTGTGATGTGTTATAGTCTTTGGTGGCGAACGAAGAATTTCAGCACATTCTGCGTGTGTTGAACACAAATGTTGATGGAAAGCAGAAGATCCAGTTCGCAATGACCTCAATCAAGGGTATTGGTAGGAGATTCGCTAACATCTGCTGTAAGAAAGCTGATGTTGACATGAACAAGAGGTTTGTAGTTGCGATTTTGATCTCATTTTTAAAAATCAGTCATTTTTGTTGTTCAAATTAATGGGTTTCTTGAGTTTAATCCATCTCACGTTTAAAAATCATATTTTTGATGTTGTTGAAATGGTTTTTTTTTTTTTTTGTTGGATTTATTTAGGGCTGGTGAATTGAGTGCTGCAGAGTTGGATAATATTATGACAGTGGTTGCAAATCCTCGTCAATTCAAGGTTCCAGATTGGTTTTTGAACAGAAAGAAGGATTACAAGGATGGCAAATTCTCTCAGGTTGTCTCCAATCAACTCGACATGAAGTTGAGAGATGATTTGGAGAGACTCAAGAAGATCCGGTAAGATGCTACTTCATTGTTTTTTGTGTGATTGTTTGCCTGTGTTAACTATAAAGATGATTCTCACTCAGTTGGTTTTTTAGTATAGGTTTAAATTAACATTTCAACACTATGTAGGAATATCAAAATTGAGATGTAGTAGTAAGATGATAGGACTAATAACCATTGCTTGATGCTTTAGAACGAGAATTAACTATTGGAGAATCTAAAGCTCATGCACTACCGCTGATGCACCACCACTGCATTGCTTTGATCGTGTGTGATGCTTTAGCTTTCTCAATAGTGTTTGAAAATAGAACAGTGGGAAGTGTTATTAGTTTACTTGAATAATCAAATGTTTCCCATAAGCGGAAATACGGGCAATAGAATTGGACCAAAAAGTAGCTGGCTCTTATCCAATGACTTGTATTTTGTTTTCTCTTGGCTAGATAGTTTCACGTTGTCTTCCTTGCATTTTTTACTATGTATTTGCATTTTTTACTATGTATGATATTCATGTTGATATAGGGATATATGTGTCGTGAGATGAAGTAACACAATAAAATTTTAGACTGTTTGGATAAACAGTTTAATTAAGCACTTATGGCGTAAGAAATAATCATACAAGTGCTTATTTGTCAGCTGTTTTTTATAATAAGATGAAAACAGTTTATGGACATGGCATAAACTGATTCTATAAGTTCCCCAAACAGTTTGCTTATGCAAATTGATTAGTTTAAATAAATCCTATCTGGGCATATGCCATTATTTTTTTACTACTCAAATTCTGTATTCAATAATACAATGGATGTATGTGGAGTTTTTTTACTACTCAAATTTTGAATTCAATTCAATAATATAATGGATGTATGTGGAGAAATTGGTCATTGGCTGGTTAATAAAATTTTACTAACATCCTTTCTGTTATGCAGTAATCACCGGGGTTTGAGACACTACTGGGGCCTTCGTGTTCGTGGTCAGCATACCAAGACTACAGGCCGCAGGGGAAAGACTGTTGGTGTCTCAAAGAAGCGTTAA

Protein sequence

>MS.gene60717.t1

MSLVANEEFQHILRVLNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELSAAELDNIMTVVANPRQFKVPDWFLNRKKDYKDGKFSQVVSNQLDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR