AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene021873

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021873.t1 MTR_7g013240 91.321 265 23 0 1 265 176 440 0.0 508
MS.gene021873.t1 MTR_7g013260 88.722 266 29 1 1 265 176 441 7.52e-176 492
MS.gene021873.t1 MTR_7g013200 71.212 264 76 0 1 264 176 439 1.87e-142 407
MS.gene021873.t1 MTR_7g013220 70.076 264 79 0 1 264 187 450 5.36e-141 404
MS.gene021873.t1 MTR_7g013180 60.956 251 94 2 15 264 197 444 2.01e-112 331
MS.gene021873.t1 MTR_3g008010 37.729 273 146 6 9 261 206 474 2.50e-55 185
MS.gene021873.t1 MTR_6g014250 40.562 249 124 5 33 261 230 474 2.99e-55 185
MS.gene021873.t1 MTR_7g011470 40.756 238 122 6 39 261 225 458 3.35e-55 184
MS.gene021873.t1 MTR_7g011470 40.756 238 122 6 39 261 229 462 3.76e-55 184
MS.gene021873.t1 MTR_6g014290 38.060 268 142 5 14 261 211 474 2.32e-54 182
MS.gene021873.t1 MTR_5g058320 41.129 248 123 7 33 261 218 461 2.85e-53 179
MS.gene021873.t1 MTR_6g014187 39.149 235 131 4 35 261 246 476 9.16e-53 178
MS.gene021873.t1 MTR_6g013900 40.084 237 130 5 33 261 243 475 1.42e-52 178
MS.gene021873.t1 MTR_6g013990 35.971 278 153 7 5 261 201 474 2.59e-52 177
MS.gene021873.t1 MTR_6g013450 41.057 246 122 7 35 261 236 477 2.69e-52 177
MS.gene021873.t1 MTR_6g013960 38.554 249 130 6 32 261 232 476 2.72e-52 177
MS.gene021873.t1 MTR_6g013920 39.837 246 125 6 35 261 234 475 3.15e-52 177
MS.gene021873.t1 MTR_6g014190 36.800 250 133 6 32 261 39 283 4.99e-52 171
MS.gene021873.t1 MTR_0288s0020 43.350 203 105 4 65 261 259 457 6.79e-52 176
MS.gene021873.t1 MTR_6g014310 39.831 236 130 4 35 262 247 478 1.22e-51 175
MS.gene021873.t1 MTR_8g007585 42.365 203 107 4 65 261 190 388 3.76e-51 172
MS.gene021873.t1 MTR_8g059425 38.113 265 149 7 6 261 216 474 6.20e-51 174
MS.gene021873.t1 MTR_0477s0010 40.887 203 110 4 65 261 115 313 8.13e-51 169
MS.gene021873.t1 MTR_6g014270 38.800 250 130 7 32 262 231 476 1.17e-50 173
MS.gene021873.t1 MTR_6g014050 39.474 228 126 5 42 261 254 477 1.58e-50 172
MS.gene021873.t1 MTR_6g014170 40.086 232 119 4 46 261 231 458 1.70e-50 172
MS.gene021873.t1 MTR_6g013440 37.447 235 135 5 35 261 247 477 2.16e-50 172
MS.gene021873.t1 MTR_1g107380 32.707 266 162 4 13 261 204 469 9.10e-50 170
MS.gene021873.t1 MTR_4g094920 36.122 263 144 7 23 262 216 477 1.18e-49 171
MS.gene021873.t1 MTR_7g080935 36.232 276 153 7 6 262 179 450 1.41e-49 169
MS.gene021873.t1 MTR_6g011340 39.149 235 131 5 35 261 246 476 1.73e-49 170
MS.gene021873.t1 MTR_6g014220 38.153 249 130 6 33 261 230 474 3.35e-49 169
MS.gene021873.t1 MTR_6g014020 35.632 261 145 6 20 261 220 476 9.86e-49 167
MS.gene021873.t1 MTR_4g095008 35.115 262 146 6 24 262 202 462 1.35e-48 169
MS.gene021873.t1 MTR_6g014040 37.872 235 134 5 35 261 247 477 1.84e-48 167
MS.gene021873.t1 MTR_2g008210 37.037 270 145 7 15 262 208 474 3.89e-48 166
MS.gene021873.t1 MTR_7g080940 34.058 276 159 6 6 262 179 450 5.61e-48 165
MS.gene021873.t1 MTR_6g014150 36.546 249 135 6 32 261 229 473 6.12e-48 166
MS.gene021873.t1 MTR_6g014200 37.719 228 130 5 42 261 250 473 6.33e-48 166
MS.gene021873.t1 MTR_6g038230 34.559 272 155 5 10 262 185 452 1.20e-47 164
MS.gene021873.t1 MTR_6g014240 38.528 231 123 4 46 261 217 443 7.74e-47 162
MS.gene021873.t1 MTR_3g069710 38.115 244 131 7 35 262 210 449 6.28e-46 160
MS.gene021873.t1 MTR_6g038220 34.340 265 155 5 15 262 189 451 1.13e-45 159
MS.gene021873.t1 MTR_6g038200 34.717 265 154 5 15 262 190 452 3.55e-45 158
MS.gene021873.t1 MTR_6g038300 34.328 268 152 6 15 262 190 453 4.75e-45 157
MS.gene021873.t1 MTR_5g031840 35.185 270 154 5 11 263 195 460 8.47e-45 157
MS.gene021873.t1 MTR_7g080950 31.716 268 164 5 12 262 180 445 1.45e-44 156
MS.gene021873.t1 MTR_0891s0010 32.963 270 155 6 14 261 21 286 3.81e-44 151
MS.gene021873.t1 MTR_3g479490 35.401 274 151 8 11 262 202 471 7.63e-44 155
MS.gene021873.t1 MTR_3g479520 36.364 231 132 6 42 261 253 479 2.24e-43 154
MS.gene021873.t1 MTR_6g033615 37.500 216 120 5 48 253 229 439 2.57e-43 153
MS.gene021873.t1 MTR_4g094220 31.915 282 164 5 4 261 198 475 3.50e-43 153
MS.gene021873.t1 MTR_6g023665 34.483 261 144 7 24 260 210 467 3.96e-43 152
MS.gene021873.t1 MTR_0184s0030 30.903 288 164 8 7 260 177 463 3.99e-43 152
MS.gene021873.t1 MTR_8g009055 33.094 278 157 8 16 265 192 468 8.08e-43 152
MS.gene021873.t1 MTR_5g098960 39.906 213 116 6 46 251 228 435 1.34e-42 151
MS.gene021873.t1 MTR_3g479470 31.359 287 163 8 5 261 194 476 1.34e-42 151
MS.gene021873.t1 MTR_3g479610 34.632 231 136 6 42 261 83 309 1.42e-42 147
MS.gene021873.t1 MTR_0036s0220 38.333 240 125 7 38 260 240 473 3.56e-42 150
MS.gene021873.t1 MTR_7g047030 38.462 208 111 6 51 242 234 440 7.47e-42 149
MS.gene021873.t1 MTR_7g047270 38.462 208 111 6 51 242 234 440 7.47e-42 149
MS.gene021873.t1 MTR_8g083290 32.841 271 157 7 15 261 191 460 9.82e-42 149
MS.gene021873.t1 MTR_8g006730 38.462 234 116 9 24 233 204 433 1.22e-41 149
MS.gene021873.t1 MTR_6g038240 31.111 270 167 4 10 262 185 452 1.28e-41 148
MS.gene021873.t1 MTR_3g049970 34.956 226 130 6 53 261 241 466 1.59e-41 149
MS.gene021873.t1 MTR_6g488280 37.662 231 122 7 49 260 233 460 2.37e-41 148
MS.gene021873.t1 MTR_0428s0010 37.662 231 122 7 49 260 233 460 2.37e-41 148
MS.gene021873.t1 MTR_5g016480 34.252 254 145 7 30 262 216 468 3.13e-41 147
MS.gene021873.t1 MTR_0078s0010 37.799 209 111 5 51 242 234 440 3.43e-41 147
MS.gene021873.t1 MTR_5g035580 30.827 266 166 5 15 263 188 452 3.92e-41 147
MS.gene021873.t1 MTR_6g033625 36.937 222 125 5 49 260 244 460 4.80e-41 147
MS.gene021873.t1 MTR_3g079480 34.632 231 136 6 42 261 259 485 6.21e-41 147
MS.gene021873.t1 MTR_8g008990 32.500 280 158 8 16 265 192 470 7.38e-41 147
MS.gene021873.t1 MTR_8g009050 32.841 271 153 8 23 265 199 468 8.11e-41 146
MS.gene021873.t1 MTR_5g464810 37.551 245 128 7 35 261 237 474 8.41e-41 146
MS.gene021873.t1 MTR_5g064240 37.551 245 128 7 35 261 237 474 8.41e-41 146
MS.gene021873.t1 MTR_5g031860 34.118 255 144 6 29 263 218 468 1.32e-40 146
MS.gene021873.t1 MTR_1g019510 31.864 295 162 8 7 265 174 465 1.33e-40 146
MS.gene021873.t1 MTR_5g464760 37.288 236 132 6 36 261 247 476 1.36e-40 146
MS.gene021873.t1 MTR_8g012650 36.245 229 123 8 54 260 240 467 4.79e-40 144
MS.gene021873.t1 MTR_8g012635 36.681 229 122 8 54 260 240 467 5.36e-40 144
MS.gene021873.t1 MTR_8g009063 31.295 278 162 6 16 265 199 475 6.69e-40 144
MS.gene021873.t1 MTR_6g033725 34.978 223 130 5 48 260 240 457 6.89e-40 144
MS.gene021873.t1 MTR_8g043470 38.144 194 110 3 74 261 185 374 6.98e-40 142
MS.gene021873.t1 MTR_0184s0040 34.894 235 132 6 51 265 249 482 8.35e-40 144
MS.gene021873.t1 MTR_0078s0190 34.894 235 132 6 51 265 249 482 8.35e-40 144
MS.gene021873.t1 MTR_5g035560 32.000 250 152 5 29 261 200 448 1.06e-39 144
MS.gene021873.t1 MTR_6g033660 34.529 223 131 4 48 260 242 459 1.07e-39 144
MS.gene021873.t1 MTR_6g033675 34.978 223 133 5 48 260 240 460 2.17e-39 143
MS.gene021873.t1 MTR_6g014300 33.617 235 128 5 35 261 248 462 3.60e-39 142
MS.gene021873.t1 MTR_8g006710 34.601 263 146 8 24 262 203 463 4.97e-39 142
MS.gene021873.t1 MTR_5g031830 34.524 252 141 5 32 263 222 469 7.88e-39 141
MS.gene021873.t1 MTR_3g069690 37.449 243 135 6 35 261 205 446 8.82e-39 141
MS.gene021873.t1 MTR_8g012630 38.756 209 106 7 74 260 203 411 1.02e-38 140
MS.gene021873.t1 MTR_1g107375 33.937 221 131 5 53 261 233 450 1.06e-38 140
MS.gene021873.t1 MTR_8g083280 34.855 241 141 6 33 261 222 458 1.14e-38 140
MS.gene021873.t1 MTR_1g107365 34.081 223 125 6 54 261 273 488 1.23e-38 141
MS.gene021873.t1 MTR_8g088560 30.566 265 167 4 15 262 191 455 2.02e-38 140
MS.gene021873.t1 MTR_8g027885 34.137 249 134 9 35 257 221 465 2.69e-38 140
MS.gene021873.t1 MTR_8g009073 33.077 260 142 7 20 255 67 318 2.86e-38 137
MS.gene021873.t1 MTR_6g005600 36.052 233 125 7 49 260 234 463 3.82e-38 139
MS.gene021873.t1 MTR_1g107360 34.694 245 141 8 33 261 217 458 4.26e-38 139
MS.gene021873.t1 MTR_1g019520 35.849 212 116 6 74 265 3 214 6.30e-38 133
MS.gene021873.t1 MTR_8g006270 32.734 278 151 8 16 262 189 461 6.91e-38 139
MS.gene021873.t1 MTR_7g117170 32.432 259 146 8 35 265 220 477 7.62e-38 139
MS.gene021873.t1 MTR_8g077590 33.929 224 127 7 54 260 243 462 1.07e-37 138
MS.gene021873.t1 MTR_8g008970 37.441 211 113 6 74 265 256 466 1.43e-37 140
MS.gene021873.t1 MTR_8g008970 31.321 265 162 7 16 265 531 790 1.94e-33 128
MS.gene021873.t1 MTR_7g070610 33.213 277 149 9 19 261 209 483 1.50e-37 138
MS.gene021873.t1 MTR_7g046490 34.468 235 129 7 49 262 231 461 1.59e-37 137
MS.gene021873.t1 MTR_1g107350 33.628 226 133 6 53 261 240 465 1.76e-37 137
MS.gene021873.t1 MTR_7g070780 35.922 206 113 5 75 261 275 480 1.96e-37 138
MS.gene021873.t1 MTR_8g009073 32.950 261 143 7 20 256 196 448 2.36e-37 137
MS.gene021873.t1 MTR_7g080900 28.889 270 169 6 12 262 188 453 2.86e-37 137
MS.gene021873.t1 MTR_5g019580 32.567 261 134 8 21 246 204 457 2.93e-37 137
MS.gene021873.t1 MTR_7g070660 32.353 272 153 8 19 261 207 476 3.12e-37 137
MS.gene021873.t1 MTR_8g064870 33.191 235 136 7 48 261 236 470 4.02e-37 137
MS.gene021873.t1 MTR_5g019580 32.692 260 133 8 21 245 228 480 5.66e-37 137
MS.gene021873.t1 MTR_8g027870 31.734 271 151 10 13 257 203 465 6.42e-37 136
MS.gene021873.t1 MTR_8g009067 31.734 271 139 9 16 255 74 329 7.05e-37 134
MS.gene021873.t1 MTR_3g084520 32.911 237 134 4 50 261 233 469 1.14e-36 135
MS.gene021873.t1 MTR_7g117405 35.610 205 115 3 74 261 273 477 1.16e-36 135
MS.gene021873.t1 MTR_8g012745 35.242 227 125 8 54 260 240 464 2.60e-36 134
MS.gene021873.t1 MTR_7g070940 31.955 266 155 6 20 261 206 469 2.63e-36 134
MS.gene021873.t1 MTR_8g009067 31.734 271 139 9 16 255 192 447 3.71e-36 134
MS.gene021873.t1 MTR_1g032490 34.513 226 131 6 53 261 242 467 5.11e-36 134
MS.gene021873.t1 MTR_3g084530 33.058 242 127 7 50 261 233 469 5.75e-36 133
MS.gene021873.t1 MTR_4g485630 31.915 282 157 12 12 261 192 470 1.29e-35 132
MS.gene021873.t1 MTR_4g108250 30.375 293 162 10 3 261 200 484 3.15e-35 132
MS.gene021873.t1 MTR_8g006260 31.502 273 145 9 13 253 196 458 4.93e-35 131
MS.gene021873.t1 MTR_0078s0060 31.707 246 143 6 20 242 196 439 5.49e-35 130
MS.gene021873.t1 MTR_8g012730 40.805 174 83 6 77 230 99 272 6.52e-35 127
MS.gene021873.t1 MTR_1g107315 32.743 226 135 5 53 261 240 465 9.95e-35 130
MS.gene021873.t1 MTR_4g064987 38.889 180 97 5 51 217 224 403 1.22e-34 129
MS.gene021873.t1 MTR_4g064987 38.889 180 97 5 51 217 230 409 1.51e-34 129
MS.gene021873.t1 MTR_3g084540 33.333 243 126 8 50 261 233 470 1.67e-34 129
MS.gene021873.t1 MTR_7g070800 32.432 259 145 8 33 261 214 472 2.47e-34 129
MS.gene021873.t1 MTR_7g102560 30.531 226 136 5 57 261 255 480 3.35e-34 129
MS.gene021873.t1 MTR_5g045960 32.707 266 140 10 4 236 195 454 7.10e-34 128
MS.gene021873.t1 MTR_7g102490 31.674 221 130 4 60 261 265 483 7.95e-34 128
MS.gene021873.t1 MTR_3g009510 33.471 242 138 7 42 261 233 473 1.54e-33 127
MS.gene021873.t1 MTR_5g072860 34.252 254 137 7 32 261 215 462 1.65e-33 127
MS.gene021873.t1 MTR_4g485640 30.824 279 157 11 16 261 388 663 3.20e-33 127
MS.gene021873.t1 MTR_8g064880 35.294 204 112 8 53 238 243 444 4.55e-33 125
MS.gene021873.t1 MTR_7g071040 33.971 209 119 5 72 261 279 487 5.34e-33 125
MS.gene021873.t1 MTR_7g070860 32.707 266 141 10 22 261 206 459 6.46e-33 125
MS.gene021873.t1 MTR_1g107285 34.043 235 129 8 47 261 232 460 6.51e-33 125
MS.gene021873.t1 MTR_7g102460 30.973 226 131 5 57 261 260 481 9.97e-33 125
MS.gene021873.t1 MTR_7g055710 34.653 202 113 5 75 257 275 476 1.11e-32 125
MS.gene021873.t1 MTR_7g102550 31.321 265 144 9 33 261 220 482 1.73e-32 124
MS.gene021873.t1 MTR_5g066390 35.385 195 110 7 77 261 23 211 3.80e-32 118
MS.gene021873.t1 MTR_5g004940 32.569 218 115 6 52 261 181 374 5.15e-32 122
MS.gene021873.t1 MTR_4g008630 31.405 242 128 5 48 262 230 460 5.75e-32 122
MS.gene021873.t1 MTR_6g014160 39.286 168 62 4 35 189 217 357 1.47e-31 120
MS.gene021873.t1 MTR_7g070740 33.495 206 118 5 75 261 275 480 1.88e-31 121
MS.gene021873.t1 MTR_4g024020 32.367 207 120 5 75 261 278 484 2.34e-31 121
MS.gene021873.t1 MTR_7g070810 33.019 212 121 5 71 261 261 472 2.90e-31 120
MS.gene021873.t1 MTR_5g087620 28.517 263 155 7 32 261 228 490 3.02e-31 121
MS.gene021873.t1 MTR_4g128690 31.937 191 123 3 74 261 263 449 4.73e-31 120
MS.gene021873.t1 MTR_4g031800 30.045 223 135 5 60 263 251 471 5.09e-31 120
MS.gene021873.t1 MTR_5g045970 33.333 237 129 7 54 261 253 489 5.93e-31 120
MS.gene021873.t1 MTR_4g117980 32.773 238 130 9 53 261 242 478 6.25e-31 120
MS.gene021873.t1 MTR_1g029540 27.106 273 172 5 15 262 187 457 6.63e-31 119
MS.gene021873.t1 MTR_7g102450 32.394 213 122 5 71 261 256 468 7.10e-31 120
MS.gene021873.t1 MTR_4g485620 32.830 265 152 9 20 261 190 451 8.38e-31 119
MS.gene021873.t1 MTR_8g090095 31.602 231 132 5 53 262 252 477 1.11e-30 119
MS.gene021873.t1 MTR_2g035040 30.196 255 150 7 34 261 130 383 2.41e-30 117
MS.gene021873.t1 MTR_4g128720 30.876 217 135 5 51 261 245 452 2.43e-30 118
MS.gene021873.t1 MTR_2g059240 29.577 213 142 2 54 258 250 462 2.61e-30 118
MS.gene021873.t1 MTR_4g485590 38.509 161 89 3 54 204 219 379 3.06e-30 117
MS.gene021873.t1 MTR_7g470610 32.314 229 122 8 2 204 46 267 3.57e-30 114
MS.gene021873.t1 MTR_7g070583 32.314 229 122 8 2 204 46 267 3.57e-30 114
MS.gene021873.t1 MTR_2086s0010 33.721 172 103 5 97 261 1 168 3.79e-30 111
MS.gene021873.t1 MTR_1996s0010 33.721 172 103 5 97 261 1 168 3.79e-30 111
MS.gene021873.t1 MTR_8g465670 30.806 211 117 5 53 241 237 440 5.41e-30 117
MS.gene021873.t1 MTR_7g070910 33.175 211 122 5 70 261 271 481 6.61e-30 117
MS.gene021873.t1 MTR_5g090600 29.694 229 138 6 49 263 233 452 6.95e-30 117
MS.gene021873.t1 MTR_7g102520 31.381 239 133 6 54 261 247 485 1.02e-29 117
MS.gene021873.t1 MTR_5g072820 31.183 279 169 7 1 262 174 446 1.17e-29 116
MS.gene021873.t1 MTR_5g098930 28.514 249 149 7 41 263 221 466 1.48e-29 116
MS.gene021873.t1 MTR_7g070930 33.175 211 122 5 70 261 274 484 1.50e-29 116
MS.gene021873.t1 MTR_7g071050 34.286 175 100 3 70 229 226 400 2.30e-29 115
MS.gene021873.t1 MTR_4g118000 33.333 210 117 7 74 261 255 463 2.53e-29 115
MS.gene021873.t1 MTR_5g072840 32.117 274 159 8 8 262 181 446 2.93e-29 115
MS.gene021873.t1 MTR_2g035020 33.649 211 116 6 75 261 268 478 2.98e-29 115
MS.gene021873.t1 MTR_5g090580 29.918 244 135 6 49 263 237 473 2.99e-29 115
MS.gene021873.t1 MTR_5g090630 28.571 238 145 5 50 263 228 464 3.15e-29 115
MS.gene021873.t1 MTR_5g072830 31.022 274 162 8 8 262 181 446 3.21e-29 115
MS.gene021873.t1 MTR_5g070090 34.956 226 128 8 49 261 239 458 3.46e-29 115
MS.gene021873.t1 MTR_6g014185 32.491 277 130 11 3 261 104 341 3.73e-29 113
MS.gene021873.t1 MTR_7g012120 31.140 228 133 6 58 261 253 480 4.47e-29 115
MS.gene021873.t1 MTR_8g066610 33.913 230 128 8 54 261 247 474 5.73e-29 114
MS.gene021873.t1 MTR_0536s0010 33.971 209 115 7 75 261 266 473 6.06e-29 114
MS.gene021873.t1 MTR_4g117950 33.971 209 115 6 75 261 252 459 7.40e-29 114
MS.gene021873.t1 MTR_5g072810 32.222 270 151 9 17 262 190 451 8.24e-29 114
MS.gene021873.t1 MTR_5g090670 28.692 237 142 5 53 263 240 475 9.89e-29 114
MS.gene021873.t1 MTR_1g040310 33.180 217 112 6 70 261 272 480 1.08e-28 114
MS.gene021873.t1 MTR_5g090610 28.270 237 141 6 53 263 226 459 1.14e-28 113
MS.gene021873.t1 MTR_4g117960 33.178 214 116 8 74 261 265 477 1.23e-28 114
MS.gene021873.t1 MTR_1g062380 32.381 210 120 4 75 262 282 491 1.48e-28 113
MS.gene021873.t1 MTR_8g006220 28.837 215 124 4 53 241 236 447 1.83e-28 113
MS.gene021873.t1 MTR_6g013680 31.304 230 104 5 35 261 193 371 1.84e-28 112
MS.gene021873.t1 MTR_8g071070 32.599 227 141 7 45 261 241 465 3.06e-28 112
MS.gene021873.t1 MTR_8g074550 29.832 238 124 6 21 227 220 445 4.77e-28 112
MS.gene021873.t1 MTR_5g090620 26.141 241 150 5 49 263 236 474 7.62e-28 111
MS.gene021873.t1 MTR_0536s0020 32.243 214 118 7 74 261 264 476 9.52e-28 111
MS.gene021873.t1 MTR_5g090700 27.542 236 144 6 53 263 242 475 1.04e-27 111
MS.gene021873.t1 MTR_5g075440 29.231 260 150 6 26 262 205 453 1.34e-27 110
MS.gene021873.t1 MTR_5g027210 32.292 192 109 5 61 233 263 452 1.76e-27 110
MS.gene021873.t1 MTR_8g044140 32.243 214 120 6 70 261 235 445 1.77e-27 110
MS.gene021873.t1 MTR_2g098430 29.362 235 142 6 54 264 245 479 2.22e-27 110
MS.gene021873.t1 MTR_3g031400 28.244 262 159 5 19 261 195 446 3.23e-27 109
MS.gene021873.t1 MTR_6g035265 30.233 215 121 7 74 261 258 470 3.57e-27 109
MS.gene021873.t1 MTR_2g034990 30.189 212 124 5 74 261 267 478 3.82e-27 109
MS.gene021873.t1 MTR_5g090660 27.426 237 143 7 53 263 238 471 9.52e-27 108
MS.gene021873.t1 MTR_5g070040 31.939 263 150 9 24 262 207 464 1.07e-26 108
MS.gene021873.t1 MTR_7g067120 36.628 172 103 5 73 243 239 405 1.31e-26 107
MS.gene021873.t1 MTR_3g031450 27.734 256 153 5 32 261 199 448 1.66e-26 107
MS.gene021873.t1 MTR_6g035295 30.622 209 127 5 71 261 273 481 1.93e-26 107
MS.gene021873.t1 MTR_7g039550 31.068 206 123 6 74 261 54 258 1.96e-26 104
MS.gene021873.t1 MTR_4g117890 30.233 215 125 6 74 263 259 473 2.98e-26 107
MS.gene021873.t1 MTR_5g029800 31.132 212 120 6 75 261 264 474 3.59e-26 107
MS.gene021873.t1 MTR_8g032950 32.093 215 119 6 74 262 265 478 3.70e-26 107
MS.gene021873.t1 MTR_0009s0240 31.081 222 141 7 50 261 236 455 3.75e-26 106
MS.gene021873.t1 MTR_5g067170 30.493 223 129 7 63 261 256 476 5.18e-26 106
MS.gene021873.t1 MTR_4g079270 32.020 203 123 5 53 245 242 439 5.48e-26 106
MS.gene021873.t1 MTR_7g070870 30.153 262 153 10 15 261 209 455 2.55e-25 104
MS.gene021873.t1 MTR_5g039900 28.846 208 131 4 71 261 273 480 3.61e-25 103
MS.gene021873.t1 MTR_4g079250 29.880 251 156 8 10 245 194 439 5.11e-25 103
MS.gene021873.t1 MTR_2g014900 33.742 163 102 4 75 231 256 418 7.90e-25 102
MS.gene021873.t1 MTR_4g059370 37.500 160 91 5 77 227 190 349 8.00e-25 102
MS.gene021873.t1 MTR_5g040030 29.384 211 128 6 71 261 275 484 9.69e-25 102
MS.gene021873.t1 MTR_5g016660 30.144 209 120 4 75 261 276 480 1.05e-24 102
MS.gene021873.t1 MTR_7g067330 35.849 159 96 5 73 230 239 392 1.58e-24 101
MS.gene021873.t1 MTR_6g035185 27.230 213 130 4 74 261 267 479 2.34e-24 101
MS.gene021873.t1 MTR_7g070760 35.714 140 68 2 75 213 90 208 4.08e-24 96.7
MS.gene021873.t1 MTR_2g046820 26.848 257 156 7 33 261 207 459 1.36e-23 99.4
MS.gene021873.t1 MTR_3g009490 30.435 184 106 6 100 261 2 185 1.53e-23 94.7
MS.gene021873.t1 MTR_6g014000 38.281 128 72 3 140 264 32 155 1.73e-23 99.4
MS.gene021873.t1 MTR_8g009840 31.746 189 109 4 92 260 333 521 2.49e-23 99.0
MS.gene021873.t1 MTR_2g040530 27.119 236 151 6 42 261 231 461 3.45e-23 98.2
MS.gene021873.t1 MTR_8g466240 27.490 251 160 6 35 265 206 454 1.16e-22 96.7
MS.gene021873.t1 MTR_8g068360 34.031 191 116 6 76 257 270 459 1.36e-22 96.7
MS.gene021873.t1 MTR_1g107325 35.714 126 76 3 141 261 224 349 2.28e-22 95.1
MS.gene021873.t1 MTR_2g046750 27.490 251 133 8 33 259 210 435 2.66e-22 95.9
MS.gene021873.t1 MTR_7g070995 35.971 139 75 4 137 261 3 141 4.35e-22 90.1
MS.gene021873.t1 MTR_2g008226 37.267 161 89 5 77 230 278 433 1.01e-21 94.4
MS.gene021873.t1 MTR_8g068330 31.381 239 149 8 33 257 219 456 1.10e-21 94.0
MS.gene021873.t1 MTR_4g082820 29.771 262 153 9 21 265 218 465 2.13e-21 93.2
MS.gene021873.t1 MTR_7g080960 29.101 189 90 3 74 262 324 468 3.09e-21 92.8
MS.gene021873.t1 MTR_8g007565 28.750 240 144 7 23 241 206 439 3.86e-21 92.4
MS.gene021873.t1 MTR_1g090270 33.136 169 103 6 70 229 257 424 4.63e-21 92.4
MS.gene021873.t1 MTR_5g072850 28.889 270 160 7 4 261 129 378 4.93e-21 91.7
MS.gene021873.t1 MTR_8g007650 28.750 240 144 7 23 241 206 439 7.59e-21 91.7
MS.gene021873.t1 MTR_4g123553 30.556 216 133 7 29 230 212 424 1.17e-20 91.3
MS.gene021873.t1 MTR_8g056740 32.738 168 108 3 74 237 167 333 2.97e-20 89.4
MS.gene021873.t1 MTR_8g068340 28.879 232 142 8 16 230 206 431 3.51e-20 89.7
MS.gene021873.t1 MTR_5g066410 28.235 255 143 9 23 251 178 418 2.51e-19 87.0
MS.gene021873.t1 MTR_3g435310 32.484 157 102 3 77 230 228 383 2.82e-19 87.0
MS.gene021873.t1 MTR_6g014186 28.916 249 116 9 32 261 229 435 7.93e-19 85.9
MS.gene021873.t1 MTR_6g036650 33.508 191 107 8 77 259 279 457 8.17e-19 85.9
MS.gene021873.t1 MTR_2g083430 35.185 162 98 5 76 230 258 419 1.70e-18 84.7
MS.gene021873.t1 MTR_2g083480 33.152 184 111 6 75 246 257 440 2.39e-18 84.3
MS.gene021873.t1 MTR_6g013435 28.689 244 112 9 35 261 105 303 2.44e-18 83.2
MS.gene021873.t1 MTR_4g077960 31.210 157 104 3 77 230 246 401 3.12e-18 84.0
MS.gene021873.t1 MTR_2g008220 32.075 159 100 3 77 230 273 428 3.13e-18 84.0
MS.gene021873.t1 MTR_2g008225 31.210 157 104 3 77 230 274 429 6.46e-18 83.2
MS.gene021873.t1 MTR_2g046620 29.570 186 123 5 52 230 241 425 1.03e-17 82.4
MS.gene021873.t1 MTR_4g082810 32.680 153 94 2 49 192 239 391 2.18e-17 81.3
MS.gene021873.t1 MTR_5g090690 32.168 143 79 3 50 175 165 306 1.11e-16 79.3
MS.gene021873.t1 MTR_6g078320 25.735 272 170 8 8 261 219 476 2.84e-16 78.6
MS.gene021873.t1 MTR_6g042310 29.936 157 106 3 77 230 272 427 3.17e-16 78.2
MS.gene021873.t1 MTR_1g090280 32.867 143 87 5 97 230 133 275 7.55e-16 76.3
MS.gene021873.t1 MTR_6g013890 28.079 203 82 7 35 231 95 239 7.93e-16 75.5
MS.gene021873.t1 MTR_6g015160 46.429 84 39 3 134 216 11 89 1.06e-15 71.2
MS.gene021873.t1 MTR_0536s0030 38.614 101 57 2 140 239 213 309 2.75e-15 75.1
MS.gene021873.t1 MTR_8g028755 25.112 223 114 6 10 227 47 221 2.34e-14 70.9
MS.gene021873.t1 MTR_2g083380 32.099 162 103 5 76 230 275 436 7.10e-14 71.2
MS.gene021873.t1 MTR_2g083490 30.864 162 105 5 76 230 258 419 3.30e-13 69.3
MS.gene021873.t1 MTR_0078s0200 31.111 135 77 4 7 126 177 310 5.30e-13 68.2
MS.gene021873.t1 MTR_0475s0030 40.000 75 41 1 150 224 5 75 6.59e-12 60.8
MS.gene021873.t1 MTR_2g083420 26.776 183 100 7 75 246 257 416 1.28e-11 64.7
MS.gene021873.t1 MTR_2g083390 26.230 183 101 7 75 246 257 416 2.99e-11 63.5
MS.gene021873.t1 MTR_2g009740 36.082 97 55 2 69 162 196 288 3.70e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene021873.t1 AT3G02100 43.798 258 130 4 13 263 209 458 2.82e-73 231
MS.gene021873.t1 AT1G05675 38.710 248 132 6 33 262 205 450 2.02e-49 169
MS.gene021873.t1 AT1G05680 36.154 260 148 5 20 262 192 450 1.88e-48 166
MS.gene021873.t1 AT3G46670 36.777 242 140 5 33 263 208 447 2.10e-48 166
MS.gene021873.t1 AT3G21560 37.768 233 125 7 42 261 244 469 8.47e-48 166
MS.gene021873.t1 AT3G55710 44.845 194 97 4 76 262 262 452 5.94e-47 162
MS.gene021873.t1 AT5G59590 37.788 217 123 4 53 261 234 446 6.16e-47 162
MS.gene021873.t1 AT3G55700 40.724 221 116 6 51 262 234 448 6.67e-47 162
MS.gene021873.t1 AT4G15500 36.771 223 128 6 51 261 238 459 2.64e-45 159
MS.gene021873.t1 AT3G46660 36.406 217 130 4 53 263 240 454 3.52e-45 158
MS.gene021873.t1 AT2G31750 40.206 194 110 2 74 262 260 452 4.80e-45 157
MS.gene021873.t1 AT2G31750 40.206 194 110 2 74 262 260 452 6.25e-45 158
MS.gene021873.t1 AT1G22340 34.909 275 148 8 12 261 210 478 8.22e-45 157
MS.gene021873.t1 AT1G22400 33.818 275 152 6 12 262 211 479 9.04e-45 157
MS.gene021873.t1 AT2G23260 32.143 280 170 6 2 262 173 451 1.39e-44 156
MS.gene021873.t1 AT5G59580 37.156 218 123 5 53 261 232 444 3.22e-44 155
MS.gene021873.t1 AT1G22370 40.860 186 96 3 38 209 65 250 3.39e-44 152
MS.gene021873.t1 AT1G22380 34.646 254 142 5 14 249 212 459 4.90e-44 155
MS.gene021873.t1 AT3G46720 35.909 220 132 3 47 263 226 439 4.98e-44 154
MS.gene021873.t1 AT4G15490 35.747 221 129 6 53 261 244 463 5.73e-44 155
MS.gene021873.t1 AT1G22360 35.484 248 138 4 12 241 207 450 1.22e-43 154
MS.gene021873.t1 AT5G05880 35.983 239 135 5 33 263 219 447 1.59e-43 153
MS.gene021873.t1 AT3G11340 40.404 198 112 3 71 263 247 443 2.49e-43 153
MS.gene021873.t1 AT2G23250 34.818 247 146 6 30 262 188 433 3.66e-43 152
MS.gene021873.t1 AT3G46680 37.674 215 124 5 54 261 235 446 1.00e-42 151
MS.gene021873.t1 AT3G22250 38.498 213 107 7 48 246 241 443 2.03e-42 150
MS.gene021873.t1 AT3G46700 34.862 218 129 5 53 261 228 441 2.43e-42 150
MS.gene021873.t1 AT1G22370 40.860 186 96 3 38 209 235 420 2.54e-42 150
MS.gene021873.t1 AT1G22360 37.963 216 116 3 12 209 207 422 4.98e-42 150
MS.gene021873.t1 AT5G05900 37.288 236 129 5 33 263 225 446 9.11e-42 149
MS.gene021873.t1 AT4G15480 35.268 224 129 7 54 261 252 475 2.66e-41 148
MS.gene021873.t1 AT3G46650 35.047 214 131 4 53 260 217 428 5.33e-41 146
MS.gene021873.t1 AT3G16520 34.685 222 135 5 53 264 239 460 5.61e-41 147
MS.gene021873.t1 AT5G38010 36.986 219 122 6 53 261 238 450 2.08e-40 145
MS.gene021873.t1 AT5G05870 36.404 228 129 7 44 261 230 451 3.59e-40 145
MS.gene021873.t1 AT2G43840 30.147 272 169 6 10 262 175 444 6.36e-40 144
MS.gene021873.t1 AT1G78270 36.000 225 119 6 35 240 232 450 6.49e-40 144
MS.gene021873.t1 AT3G46690 34.703 219 136 4 53 265 233 450 1.68e-39 142
MS.gene021873.t1 AT3G16520 36.041 197 117 4 53 240 239 435 1.98e-39 142
MS.gene021873.t1 AT2G15480 34.545 275 152 9 16 265 210 481 2.08e-39 143
MS.gene021873.t1 AT2G43840 30.147 272 169 6 10 262 175 444 2.38e-39 142
MS.gene021873.t1 AT3G16520 36.041 197 117 4 53 240 239 435 2.61e-39 142
MS.gene021873.t1 AT4G01070 32.911 237 135 4 29 242 207 442 3.51e-39 142
MS.gene021873.t1 AT2G15490 35.273 275 145 11 20 265 211 481 5.48e-39 142
MS.gene021873.t1 AT2G15490 35.055 271 148 10 20 265 211 478 1.14e-38 141
MS.gene021873.t1 AT5G38040 35.909 220 121 5 54 261 235 446 1.20e-38 140
MS.gene021873.t1 AT1G01420 33.459 266 149 8 20 259 198 461 2.15e-38 140
MS.gene021873.t1 AT1G01420 33.459 266 149 8 20 259 201 464 2.59e-38 140
MS.gene021873.t1 AT2G31790 30.769 273 170 6 9 262 182 454 4.57e-38 139
MS.gene021873.t1 AT2G43820 34.343 198 124 3 69 262 249 444 4.63e-38 139
MS.gene021873.t1 AT2G15480 33.684 285 151 10 16 265 210 491 1.04e-37 139
MS.gene021873.t1 AT5G05860 37.129 202 115 3 67 260 246 443 1.94e-37 137
MS.gene021873.t1 AT4G15550 31.496 254 138 7 33 261 228 470 3.10e-37 137
MS.gene021873.t1 AT3G53160 34.842 221 122 6 61 261 261 479 4.40e-37 137
MS.gene021873.t1 AT1G05560 32.530 249 147 6 33 261 201 448 6.26e-37 136
MS.gene021873.t1 AT1G05560 32.530 249 147 6 33 261 251 498 8.06e-37 136
MS.gene021873.t1 AT5G05890 35.071 211 125 4 63 265 247 453 5.38e-36 133
MS.gene021873.t1 AT4G14090 32.273 220 141 6 50 261 233 452 7.73e-36 133
MS.gene021873.t1 AT2G26480 35.211 213 126 6 53 256 227 436 8.54e-36 132
MS.gene021873.t1 AT5G17050 31.008 258 167 5 11 261 200 453 1.10e-35 132
MS.gene021873.t1 AT1G05530 31.746 252 148 6 33 261 201 451 3.41e-35 131
MS.gene021873.t1 AT4G34135 37.561 205 114 5 70 261 275 478 6.31e-35 131
MS.gene021873.t1 AT4G34131 35.294 255 136 9 33 261 225 476 7.33e-35 130
MS.gene021873.t1 AT2G36760 30.888 259 143 7 33 257 225 481 1.18e-34 130
MS.gene021873.t1 AT1G01390 36.726 226 101 6 49 234 234 457 2.80e-34 129
MS.gene021873.t1 AT1G01390 35.341 249 112 7 33 234 228 474 2.85e-34 129
MS.gene021873.t1 AT2G36750 30.888 259 143 8 33 257 220 476 1.49e-33 127
MS.gene021873.t1 AT3G50740 31.439 264 141 7 33 260 210 469 1.52e-33 127
MS.gene021873.t1 AT4G34138 31.852 270 156 8 16 261 210 475 2.28e-33 127
MS.gene021873.t1 AT2G36800 33.036 224 128 6 54 257 259 480 3.29e-33 126
MS.gene021873.t1 AT2G36780 31.274 259 142 8 33 257 225 481 4.19e-33 126
MS.gene021873.t1 AT2G36970 31.387 274 164 8 1 262 207 468 3.15e-32 124
MS.gene021873.t1 AT5G66690 31.633 294 154 10 1 257 177 460 4.91e-32 123
MS.gene021873.t1 AT5G26310 30.526 285 148 8 12 256 184 458 7.21e-32 122
MS.gene021873.t1 AT5G17040 31.336 217 140 5 50 261 122 334 9.02e-32 120
MS.gene021873.t1 AT2G36770 30.526 285 155 12 13 261 208 485 9.30e-32 122
MS.gene021873.t1 AT1G07250 30.645 248 154 6 33 262 223 470 1.50e-31 121
MS.gene021873.t1 AT5G17040 31.336 217 140 5 50 261 224 436 1.55e-31 121
MS.gene021873.t1 AT4G15260 27.519 258 156 6 33 261 96 351 1.66e-31 119
MS.gene021873.t1 AT2G30150 31.985 272 145 9 16 261 176 433 2.96e-31 120
MS.gene021873.t1 AT2G29750 33.068 251 140 8 33 261 226 470 3.07e-31 120
MS.gene021873.t1 AT3G21790 29.368 269 159 7 24 261 207 475 3.10e-31 121
MS.gene021873.t1 AT2G30150 31.985 272 145 9 16 261 192 449 3.78e-31 120
MS.gene021873.t1 AT2G28080 30.189 265 162 12 11 261 213 468 4.98e-31 120
MS.gene021873.t1 AT3G53150 32.692 208 117 4 20 206 222 427 7.08e-31 120
MS.gene021873.t1 AT2G29740 34.513 226 132 6 49 261 249 471 1.06e-30 119
MS.gene021873.t1 AT2G18560 31.330 233 132 8 53 265 150 374 1.39e-30 117
MS.gene021873.t1 AT2G30140 31.048 248 140 7 33 261 212 447 1.60e-30 118
MS.gene021873.t1 AT5G17030 31.795 195 127 3 50 242 240 430 1.67e-30 118
MS.gene021873.t1 AT2G30140 31.048 248 140 7 33 261 213 448 1.68e-30 118
MS.gene021873.t1 AT3G21780 28.428 299 167 9 3 261 174 465 1.82e-30 119
MS.gene021873.t1 AT1G24100 33.333 195 119 4 74 261 265 455 1.83e-30 118
MS.gene021873.t1 AT4G36770 33.032 221 123 6 53 255 237 450 2.88e-30 118
MS.gene021873.t1 AT4G15280 27.799 259 155 7 33 261 214 470 2.89e-30 118
MS.gene021873.t1 AT4G15280 27.799 259 155 7 33 261 246 502 3.67e-30 118
MS.gene021873.t1 AT1G73880 32.093 215 139 3 53 261 250 463 5.74e-30 117
MS.gene021873.t1 AT2G29710 29.839 248 152 7 33 261 215 459 5.82e-30 117
MS.gene021873.t1 AT3G21800 27.308 260 157 6 33 261 214 472 1.09e-29 116
MS.gene021873.t1 AT2G16890 31.183 279 160 9 5 254 181 456 1.44e-29 116
MS.gene021873.t1 AT2G36790 31.274 259 142 7 33 257 224 480 1.69e-29 116
MS.gene021873.t1 AT3G21760 29.730 259 152 6 33 261 219 477 1.81e-29 116
MS.gene021873.t1 AT2G29730 28.226 248 155 7 33 261 216 459 1.10e-28 114
MS.gene021873.t1 AT2G16890 31.984 247 139 7 5 225 181 424 1.30e-28 113
MS.gene021873.t1 AT3G21750 25.862 290 178 7 6 261 179 465 1.30e-28 113
MS.gene021873.t1 AT2G18570 29.703 202 124 4 53 240 240 437 2.61e-28 112
MS.gene021873.t1 AT1G07260 28.070 228 146 5 49 261 244 468 5.79e-28 112
MS.gene021873.t1 AT1G10400 29.771 262 165 9 16 262 203 460 6.76e-28 111
MS.gene021873.t1 AT1G30530 31.132 212 139 4 50 258 237 444 7.16e-28 111
MS.gene021873.t1 AT5G12890 31.169 231 139 6 53 264 252 481 8.45e-28 111
MS.gene021873.t1 AT5G14860 33.188 229 131 6 33 249 230 448 1.47e-27 110
MS.gene021873.t1 AT5G49690 29.771 262 159 9 12 261 203 451 1.83e-27 110
MS.gene021873.t1 AT5G03490 29.717 212 142 4 54 261 251 459 3.11e-27 109
MS.gene021873.t1 AT5G37950 39.855 138 70 3 53 181 204 337 6.59e-27 107
MS.gene021873.t1 AT5G37950 39.855 138 70 3 53 181 210 343 8.84e-27 107
MS.gene021873.t1 AT5G54010 31.746 189 115 5 50 230 226 408 8.97e-26 105
MS.gene021873.t1 AT4G27570 32.919 161 103 3 75 230 248 408 1.83e-25 104
MS.gene021873.t1 AT4G27560 32.298 161 104 3 75 230 248 408 3.75e-25 103
MS.gene021873.t1 AT1G07240 27.206 272 176 8 12 261 201 472 6.23e-25 103
MS.gene021873.t1 AT5G53990 30.570 193 112 6 50 230 220 402 6.40e-25 103
MS.gene021873.t1 AT2G22930 29.570 186 123 4 50 230 220 402 1.83e-24 101
MS.gene021873.t1 AT1G06000 29.603 277 163 13 12 262 161 431 1.49e-23 99.4
MS.gene021873.t1 AT1G50580 31.183 186 122 4 50 230 219 403 4.72e-23 97.8
MS.gene021873.t1 AT1G64910 31.410 156 102 3 77 227 244 399 5.02e-23 97.8
MS.gene021873.t1 AT5G65550 28.033 239 153 8 5 230 193 425 8.86e-23 97.1
MS.gene021873.t1 AT4G09500 29.609 179 116 4 77 245 219 397 2.81e-22 95.5
MS.gene021873.t1 AT4G09500 29.609 179 116 4 77 245 244 422 3.48e-22 95.5
MS.gene021873.t1 AT1G64920 30.061 163 105 3 77 230 244 406 4.40e-22 95.1
MS.gene021873.t1 AT1G51210 29.762 168 114 2 75 242 269 432 8.35e-22 94.4
MS.gene021873.t1 AT3G29630 30.978 184 120 5 50 227 220 402 5.09e-20 89.4
MS.gene021873.t1 AT3G29630 31.013 158 103 4 76 227 219 376 2.24e-19 87.4
MS.gene021873.t1 AT5G54060 33.333 180 110 6 55 227 248 424 1.04e-17 82.8
MS.gene021873.t1 AT2G22590 28.000 200 132 7 52 242 249 445 3.50e-17 81.3
MS.gene021873.t1 AT4G01070 38.739 111 59 3 29 132 207 315 1.92e-13 69.7

Find 58 sgRNAs with CRISPR-Local

Find 66 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGATACAAGCTATAAATTT+TGG 0.125376 7.1:+82561596 MS.gene021873:CDS
CTAGGGCTAGTTCATTAAAT+TGG 0.232886 7.1:-82561832 None:intergenic
TTACTTCCATGGAAATCATT+AGG 0.251367 7.1:-82561929 None:intergenic
TCGCCCAACTAATAAACTTT+TGG 0.254931 7.1:-82562303 None:intergenic
TGGTAGGAACTTTGGTGATA+TGG 0.260975 7.1:-82561669 None:intergenic
ACAACAACAAAAGTTCATTT+TGG 0.269702 7.1:+82561714 MS.gene021873:CDS
TACTTCCATGGAAATCATTA+GGG 0.333367 7.1:-82561928 None:intergenic
CTAGTTCATTAAATTGGTTT+TGG 0.358155 7.1:-82561826 None:intergenic
CCTACCAATTGGTCCATTGA+TGG 0.377369 7.1:+82561685 MS.gene021873:CDS
TCTCCAAAAGTTTATTAGTT+GGG 0.379670 7.1:+82562300 MS.gene021873:CDS
ACCAGCATGTACACCTTCTA+TGG 0.381997 7.1:-82562041 None:intergenic
TTGTTGTTACTTTCCATCAA+TGG 0.392206 7.1:-82561698 None:intergenic
AAGACACAACTTGCTTAGAT+TGG 0.392843 7.1:+82561741 MS.gene021873:CDS
CTTTGGTAGTGTGGTAGTAA+TGG 0.394763 7.1:+82561802 MS.gene021873:CDS
GTAAAGGTAAAATTGTTAGT+TGG 0.403350 7.1:+82561948 MS.gene021873:CDS
ATCTCCAAAAGTTTATTAGT+TGG 0.404458 7.1:+82562299 MS.gene021873:CDS
TAAAGGTAAAATTGTTAGTT+GGG 0.409569 7.1:+82561949 MS.gene021873:CDS
ATTTGTGATGTGTGGAAGAC+TGG 0.417376 7.1:+82562118 MS.gene021873:CDS
TCTGTCATATATGTTTCCTT+TGG 0.423583 7.1:+82561785 MS.gene021873:CDS
ATCTTATCTACGCCGCGCAA+TGG 0.431831 7.1:-82561551 None:intergenic
TCTTATCTACGCCGCGCAAT+GGG 0.432216 7.1:-82561550 None:intergenic
CTTTCCATCAATGGACCAAT+TGG 0.450743 7.1:-82561689 None:intergenic
AGTTGGTGATGATGGCATAA+AGG 0.453047 7.1:+82562210 MS.gene021873:CDS
GGATGGAATTCTACCATAGA+AGG 0.456157 7.1:+82562028 MS.gene021873:CDS
GGACCAATTGGTAGGAACTT+TGG 0.458930 7.1:-82561677 None:intergenic
TCACCAAAGTTCCTACCAAT+TGG 0.467404 7.1:+82561674 MS.gene021873:CDS
TTTACCTTGTTGTCATTACT+AGG 0.478103 7.1:-82561896 None:intergenic
AATGATTTCCATGGAAGTAA+AGG 0.480314 7.1:+82561932 MS.gene021873:CDS
CTGGTGTACGTCTCTTGTGC+TGG 0.483708 7.1:+82562059 MS.gene021873:CDS
TGTCTAGAAGATCAAGTCCT+AGG 0.486727 7.1:-82561850 None:intergenic
ACTATTAATAATATAGAAGA+AGG 0.496885 7.1:+82562259 MS.gene021873:CDS
CTTATGAAGCAAGCAATGGC+TGG 0.514750 7.1:-82561998 None:intergenic
GGACGAACAACCCAAAGAAA+AGG 0.516602 7.1:-82561875 None:intergenic
ATATGTTTCCTTTGGTAGTG+TGG 0.521270 7.1:+82561793 MS.gene021873:CDS
GCATACCCTAATGATTTCCA+TGG 0.524493 7.1:+82561923 MS.gene021873:CDS
GAATTAGAGAAAGATGATGA+TGG 0.530243 7.1:+82562145 MS.gene021873:CDS
GAAACATATATGACAGATTG+AGG 0.532322 7.1:-82561779 None:intergenic
AAGAAGGTGGATCAAGTAGT+TGG 0.541876 7.1:+82562193 MS.gene021873:CDS
GCTTCATAAGTCATTGTGGA+TGG 0.554894 7.1:+82562011 MS.gene021873:CDS
TTTGGAGATTATGTGATGAC+TGG 0.561048 7.1:-82562285 None:intergenic
GATCAAGTAGTTGGTGATGA+TGG 0.561741 7.1:+82562202 MS.gene021873:CDS
GTCTAGAAGATCAAGTCCTA+GGG 0.562784 7.1:-82561849 None:intergenic
ACCATAGAAGGTGTACATGC+TGG 0.563487 7.1:+82562040 MS.gene021873:CDS
ACTGCTTATGATCTTGAGCC+TGG 0.563828 7.1:+82561638 MS.gene021873:CDS
TGAAGCAAGCAATGGCTGGA+TGG 0.573516 7.1:-82561994 None:intergenic
CCATCAATGGACCAATTGGT+AGG 0.574039 7.1:-82561685 None:intergenic
AATTGTATATTTGTGATGTG+TGG 0.575295 7.1:+82562110 MS.gene021873:CDS
CAATTTAATGAACTAGCCCT+AGG 0.592472 7.1:+82561833 MS.gene021873:CDS
CATTACTACCACACTACCAA+AGG 0.593338 7.1:-82561801 None:intergenic
GCAAGAGTTAAGCAAGAAGG+TGG 0.594799 7.1:+82562180 MS.gene021873:CDS
AAGGCAAGAGTTAAGCAAGA+AGG 0.610216 7.1:+82562177 MS.gene021873:CDS
TTGTTAGTTGGGCACCACAA+AGG 0.626281 7.1:+82561960 MS.gene021873:CDS
GGTGATATGGAAAATACACC+AGG 0.626519 7.1:-82561656 None:intergenic
ACAACAAACTTCCCATTGCG+CGG 0.626751 7.1:+82561539 MS.gene021873:CDS
GCTTGCTTCATAAGTCATTG+TGG 0.630073 7.1:+82562007 MS.gene021873:CDS
ATTAATAATATAGAAGAAGG+CGG 0.638559 7.1:+82562262 MS.gene021873:CDS
ATGACTTATGAAGCAAGCAA+TGG 0.646585 7.1:-82562002 None:intergenic
TCGTCCTAGTAATGACAACA+AGG 0.682098 7.1:+82561892 MS.gene021873:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTATTAATAATATAGAAGA+AGG + chr7.1:82562259-82562278 MS.gene021873:CDS 15.0%
!! AGAAATTGATCACTAAAAAA+TGG - chr7.1:82562085-82562104 None:intergenic 20.0%
!! ATTAATAATATAGAAGAAGG+CGG + chr7.1:82562262-82562281 MS.gene021873:CDS 20.0%
!! TAAAGGTAAAATTGTTAGTT+GGG + chr7.1:82561949-82561968 MS.gene021873:CDS 20.0%
! AATTGTATATTTGTGATGTG+TGG + chr7.1:82562110-82562129 MS.gene021873:CDS 25.0%
! ATCTCCAAAAGTTTATTAGT+TGG + chr7.1:82562299-82562318 MS.gene021873:CDS 25.0%
! GTAAAGGTAAAATTGTTAGT+TGG + chr7.1:82561948-82561967 MS.gene021873:CDS 25.0%
! TCTCCAAAAGTTTATTAGTT+GGG + chr7.1:82562300-82562319 MS.gene021873:CDS 25.0%
!! ACAACAACAAAAGTTCATTT+TGG + chr7.1:82561714-82561733 MS.gene021873:CDS 25.0%
!! GAGATACAAGCTATAAATTT+TGG + chr7.1:82561596-82561615 MS.gene021873:CDS 25.0%
!!! AAGCTATAAATTTTGGAGAA+TGG + chr7.1:82561603-82561622 MS.gene021873:CDS 25.0%
!!! ATGATGATGGTTTTATATCA+AGG + chr7.1:82562158-82562177 MS.gene021873:CDS 25.0%
!!! CTAGTTCATTAAATTGGTTT+TGG - chr7.1:82561829-82561848 None:intergenic 25.0%
AATGATTTCCATGGAAGTAA+AGG + chr7.1:82561932-82561951 MS.gene021873:CDS 30.0%
GAAACATATATGACAGATTG+AGG - chr7.1:82561782-82561801 None:intergenic 30.0%
GAATTAGAGAAAGATGATGA+TGG + chr7.1:82562145-82562164 MS.gene021873:CDS 30.0%
TACTTCCATGGAAATCATTA+GGG - chr7.1:82561931-82561950 None:intergenic 30.0%
TCTGTCATATATGTTTCCTT+TGG + chr7.1:82561785-82561804 MS.gene021873:CDS 30.0%
TTACTTCCATGGAAATCATT+AGG - chr7.1:82561932-82561951 None:intergenic 30.0%
! CAATTTTACCTTTACTTCCA+TGG - chr7.1:82561943-82561962 None:intergenic 30.0%
! TGGTTCAATATTTTCCTTTG+TGG - chr7.1:82561977-82561996 None:intergenic 30.0%
! TTTACCTTGTTGTCATTACT+AGG - chr7.1:82561899-82561918 None:intergenic 30.0%
!! CTATAAATTTTGGAGAATGG+TGG + chr7.1:82561606-82561625 MS.gene021873:CDS 30.0%
!! TTGTTGTTACTTTCCATCAA+TGG - chr7.1:82561701-82561720 None:intergenic 30.0%
ATGACTTATGAAGCAAGCAA+TGG - chr7.1:82562005-82562024 None:intergenic 35.0%
CAATTTAATGAACTAGCCCT+AGG + chr7.1:82561833-82561852 MS.gene021873:CDS 35.0%
TTTGGAGATTATGTGATGAC+TGG - chr7.1:82562288-82562307 None:intergenic 35.0%
! AAGACACAACTTGCTTAGAT+TGG + chr7.1:82561741-82561760 MS.gene021873:CDS 35.0%
! TCGCCCAACTAATAAACTTT+TGG - chr7.1:82562306-82562325 None:intergenic 35.0%
! TCTAGACAAGCCTTTTCTTT+GGG + chr7.1:82561865-82561884 MS.gene021873:CDS 35.0%
! TTCTAGACAAGCCTTTTCTT+TGG + chr7.1:82561864-82561883 MS.gene021873:CDS 35.0%
!! ATATGTTTCCTTTGGTAGTG+TGG + chr7.1:82561793-82561812 MS.gene021873:CDS 35.0%
!! CTAGGGCTAGTTCATTAAAT+TGG - chr7.1:82561835-82561854 None:intergenic 35.0%
AAGAAGGTGGATCAAGTAGT+TGG + chr7.1:82562193-82562212 MS.gene021873:CDS 40.0%
AAGGCAAGAGTTAAGCAAGA+AGG + chr7.1:82562177-82562196 MS.gene021873:CDS 40.0%
ATTTGTGATGTGTGGAAGAC+TGG + chr7.1:82562118-82562137 MS.gene021873:CDS 40.0%
CATTACTACCACACTACCAA+AGG - chr7.1:82561804-82561823 None:intergenic 40.0%
CTTTCCATCAATGGACCAAT+TGG - chr7.1:82561692-82561711 None:intergenic 40.0%
GCATACCCTAATGATTTCCA+TGG + chr7.1:82561923-82561942 MS.gene021873:CDS 40.0%
GCTTCATAAGTCATTGTGGA+TGG + chr7.1:82562011-82562030 MS.gene021873:CDS 40.0%
GCTTGCTTCATAAGTCATTG+TGG + chr7.1:82562007-82562026 MS.gene021873:CDS 40.0%
GGATGGAATTCTACCATAGA+AGG + chr7.1:82562028-82562047 MS.gene021873:CDS 40.0%
GGTGATATGGAAAATACACC+AGG - chr7.1:82561659-82561678 None:intergenic 40.0%
GTCTAGAAGATCAAGTCCTA+GGG - chr7.1:82561852-82561871 None:intergenic 40.0%
TCACCAAAGTTCCTACCAAT+TGG + chr7.1:82561674-82561693 MS.gene021873:CDS 40.0%
TCGTCCTAGTAATGACAACA+AGG + chr7.1:82561892-82561911 MS.gene021873:CDS 40.0%
TGTCTAGAAGATCAAGTCCT+AGG - chr7.1:82561853-82561872 None:intergenic 40.0%
! TGGTAGGAACTTTGGTGATA+TGG - chr7.1:82561672-82561691 None:intergenic 40.0%
!! AGTTGGTGATGATGGCATAA+AGG + chr7.1:82562210-82562229 MS.gene021873:CDS 40.0%
!! CTTTGGTAGTGTGGTAGTAA+TGG + chr7.1:82561802-82561821 MS.gene021873:CDS 40.0%
!! GATCAAGTAGTTGGTGATGA+TGG + chr7.1:82562202-82562221 MS.gene021873:CDS 40.0%
ACAACAAACTTCCCATTGCG+CGG + chr7.1:82561539-82561558 MS.gene021873:CDS 45.0%
ACCAGCATGTACACCTTCTA+TGG - chr7.1:82562044-82562063 None:intergenic 45.0%
ACTGCTTATGATCTTGAGCC+TGG + chr7.1:82561638-82561657 MS.gene021873:CDS 45.0%
CCATCAATGGACCAATTGGT+AGG - chr7.1:82561688-82561707 None:intergenic 45.0%
CCTACCAATTGGTCCATTGA+TGG + chr7.1:82561685-82561704 MS.gene021873:CDS 45.0%
CTTATGAAGCAAGCAATGGC+TGG - chr7.1:82562001-82562020 None:intergenic 45.0%
GCAAGAGTTAAGCAAGAAGG+TGG + chr7.1:82562180-82562199 MS.gene021873:CDS 45.0%
GGACCAATTGGTAGGAACTT+TGG - chr7.1:82561680-82561699 None:intergenic 45.0%
GGACGAACAACCCAAAGAAA+AGG - chr7.1:82561878-82561897 None:intergenic 45.0%
TTGTTAGTTGGGCACCACAA+AGG + chr7.1:82561960-82561979 MS.gene021873:CDS 45.0%
! ACCATAGAAGGTGTACATGC+TGG + chr7.1:82562040-82562059 MS.gene021873:CDS 45.0%
ATCTTATCTACGCCGCGCAA+TGG - chr7.1:82561554-82561573 None:intergenic 50.0%
TCTTATCTACGCCGCGCAAT+GGG - chr7.1:82561553-82561572 None:intergenic 50.0%
TGAAGCAAGCAATGGCTGGA+TGG - chr7.1:82561997-82562016 None:intergenic 50.0%
CTGGTGTACGTCTCTTGTGC+TGG + chr7.1:82562059-82562078 MS.gene021873:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 82561533 82562330 82561533 ID=MS.gene021873
chr7.1 mRNA 82561533 82562330 82561533 ID=MS.gene021873.t1;Parent=MS.gene021873
chr7.1 exon 82561533 82562330 82561533 ID=MS.gene021873.t1.exon1;Parent=MS.gene021873.t1
chr7.1 CDS 82561533 82562330 82561533 ID=cds.MS.gene021873.t1;Parent=MS.gene021873.t1
Gene Sequence

>MS.gene021873

ATGGACACAACAAACTTCCCATTGCGCGGCGTAGATAAGATCTTCTTTGATCATTCTGTGCAAGAGATACAAGCTATAAATTTTGGAGAATGGTGGCTTTGCAACACTGCTTATGATCTTGAGCCTGGTGTATTTTCCATATCACCAAAGTTCCTACCAATTGGTCCATTGATGGAAAGTAACAACAACAAAAGTTCATTTTGGCAAGAAGACACAACTTGCTTAGATTGGTTAGATAAACAAGCACCTCAATCTGTCATATATGTTTCCTTTGGTAGTGTGGTAGTAATGGACCAAAACCAATTTAATGAACTAGCCCTAGGACTTGATCTTCTAGACAAGCCTTTTCTTTGGGTTGTTCGTCCTAGTAATGACAACAAGGTAAACTATGCATACCCTAATGATTTCCATGGAAGTAAAGGTAAAATTGTTAGTTGGGCACCACAAAGGAAAATATTGAACCATCCAGCCATTGCTTGCTTCATAAGTCATTGTGGATGGAATTCTACCATAGAAGGTGTACATGCTGGTGTACGTCTCTTGTGCTGGCCATTTTTTAGTGATCAATTTCTCAATAAATTGTATATTTGTGATGTGTGGAAGACTGGACTTGAATTAGAGAAAGATGATGATGGTTTTATATCAAGGCAAGAGTTAAGCAAGAAGGTGGATCAAGTAGTTGGTGATGATGGCATAAAGGCAATGTGTTTGAAAATGAAGAAAATGACTATTAATAATATAGAAGAAGGCGGCCAGTCATCACATAATCTCCAAAAGTTTATTAGTTGGGCGAATTAA
Protein sequence

>MS.gene021873.t1

MDTTNFPLRGVDKIFFDHSVQEIQAINFGEWWLCNTAYDLEPGVFSISPKFLPIGPLMESNNNKSSFWQEDTTCLDWLDKQAPQSVIYVSFGSVVVMDQNQFNELALGLDLLDKPFLWVVRPSNDNKVNYAYPNDFHGSKGKIVSWAPQRKILNHPAIACFISHCGWNSTIEGVHAGVRLLCWPFFSDQFLNKLYICDVWKTGLELEKDDDGFISRQELSKKVDQVVGDDGIKAMCLKMKKMTINNIEEGGQSSHNLQKFISWAN