AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68300.t1 MTR_5g035580 85.193 466 18 1 1 415 1 466 0.0 797
MS.gene68300.t1 MTR_5g035560 82.751 458 28 1 9 415 7 464 0.0 766
MS.gene68300.t1 MTR_6g038230 42.637 455 207 2 3 403 1 455 9.84e-128 376
MS.gene68300.t1 MTR_6g038200 41.794 457 212 2 3 405 1 457 2.53e-127 375
MS.gene68300.t1 MTR_6g038220 42.325 456 210 2 3 405 1 456 7.02e-123 364
MS.gene68300.t1 MTR_6g038240 39.189 444 216 2 13 402 11 454 3.40e-115 345
MS.gene68300.t1 MTR_6g038300 39.910 446 213 2 13 403 11 456 9.55e-111 333
MS.gene68300.t1 MTR_7g080940 38.717 452 217 5 10 405 8 455 1.56e-106 322
MS.gene68300.t1 MTR_7g080935 38.829 461 222 5 9 413 7 463 4.56e-106 321
MS.gene68300.t1 MTR_8g088560 38.681 455 219 6 10 405 7 460 8.92e-105 318
MS.gene68300.t1 MTR_7g080950 37.668 446 224 5 10 402 3 447 1.33e-102 312
MS.gene68300.t1 MTR_7g080900 35.268 448 232 8 11 402 10 455 4.58e-85 267
MS.gene68300.t1 MTR_8g083290 34.056 461 226 16 14 400 5 461 4.48e-73 236
MS.gene68300.t1 MTR_1g107380 30.556 468 247 9 12 405 12 475 1.28e-63 212
MS.gene68300.t1 MTR_3g049970 31.780 472 235 13 12 404 8 471 1.51e-63 212
MS.gene68300.t1 MTR_8g083280 31.924 473 231 16 14 408 8 467 3.64e-63 211
MS.gene68300.t1 MTR_1g107350 31.478 467 239 11 12 402 7 468 1.01e-62 209
MS.gene68300.t1 MTR_1g107315 32.272 471 236 12 11 404 6 470 6.87e-59 199
MS.gene68300.t1 MTR_1g107375 29.759 457 247 9 11 402 6 453 4.37e-58 197
MS.gene68300.t1 MTR_1g032490 31.770 469 237 12 11 402 8 470 1.85e-56 193
MS.gene68300.t1 MTR_1g107360 30.065 459 248 11 12 402 8 461 3.72e-56 192
MS.gene68300.t1 MTR_1g107365 28.667 450 260 8 12 402 44 491 5.32e-55 190
MS.gene68300.t1 MTR_1g107285 28.033 478 266 10 8 413 3 474 1.17e-53 186
MS.gene68300.t1 MTR_3g084520 36.250 320 183 9 10 311 3 319 4.45e-53 184
MS.gene68300.t1 MTR_3g084520 44.578 83 45 1 327 408 396 478 7.56e-16 79.7
MS.gene68300.t1 MTR_7g080960 40.553 217 125 3 11 223 10 226 8.26e-50 175
MS.gene68300.t1 MTR_7g080960 36.041 197 85 4 228 402 293 470 2.18e-26 110
MS.gene68300.t1 MTR_4g095008 30.833 480 228 20 11 406 9 468 4.36e-48 172
MS.gene68300.t1 MTR_0036s0220 28.125 480 239 15 10 398 9 473 1.35e-46 167
MS.gene68300.t1 MTR_3g084540 34.036 332 196 10 10 321 3 331 6.37e-46 165
MS.gene68300.t1 MTR_3g084540 48.718 78 38 2 327 402 396 473 2.64e-15 77.8
MS.gene68300.t1 MTR_5g464810 27.766 479 244 13 10 399 9 474 1.14e-45 164
MS.gene68300.t1 MTR_5g064240 27.766 479 244 13 10 399 9 474 1.14e-45 164
MS.gene68300.t1 MTR_8g064880 33.758 314 188 8 12 308 8 318 1.26e-44 161
MS.gene68300.t1 MTR_3g479520 26.667 480 260 12 5 399 7 479 2.99e-44 160
MS.gene68300.t1 MTR_5g016480 27.673 477 260 13 12 409 7 477 1.18e-43 159
MS.gene68300.t1 MTR_3g479490 25.667 487 262 11 9 406 2 477 1.18e-43 159
MS.gene68300.t1 MTR_5g464760 26.819 481 254 14 10 402 9 479 5.17e-43 157
MS.gene68300.t1 MTR_4g094920 33.051 354 189 14 11 335 24 358 5.49e-43 157
MS.gene68300.t1 MTR_3g084530 34.030 335 192 11 10 321 3 331 1.68e-41 153
MS.gene68300.t1 MTR_3g084530 51.948 77 36 1 327 402 396 472 9.74e-17 82.4
MS.gene68300.t1 MTR_6g014186 27.703 444 249 15 13 399 7 435 2.13e-41 152
MS.gene68300.t1 MTR_3g079480 25.979 485 259 12 13 408 21 494 3.99e-41 152
MS.gene68300.t1 MTR_8g064870 32.588 313 189 8 12 308 10 316 5.45e-41 152
MS.gene68300.t1 MTR_8g064870 39.326 89 52 1 327 413 396 484 7.49e-11 64.3
MS.gene68300.t1 MTR_3g008010 30.838 334 190 9 9 308 6 332 7.09e-40 149
MS.gene68300.t1 MTR_6g013440 30.178 338 189 10 9 308 7 335 4.32e-37 141
MS.gene68300.t1 MTR_6g014040 29.552 335 188 11 13 308 10 335 8.46e-37 140
MS.gene68300.t1 MTR_6g014290 28.743 334 197 8 9 308 6 332 1.30e-36 139
MS.gene68300.t1 MTR_6g014220 28.657 335 196 8 9 308 6 332 4.99e-36 138
MS.gene68300.t1 MTR_6g014250 28.743 334 197 9 9 308 6 332 1.10e-35 137
MS.gene68300.t1 MTR_4g094220 28.955 335 190 8 13 308 7 332 5.35e-35 135
MS.gene68300.t1 MTR_7g013180 26.078 464 245 16 11 400 3 442 1.14e-34 134
MS.gene68300.t1 MTR_7g011470 30.159 315 197 8 13 308 10 320 2.78e-34 133
MS.gene68300.t1 MTR_2g008210 28.659 328 192 11 13 308 11 328 3.33e-34 133
MS.gene68300.t1 MTR_7g011470 30.255 314 194 8 13 308 10 316 1.22e-33 131
MS.gene68300.t1 MTR_7g013260 25.934 455 246 16 13 399 6 437 3.51e-33 129
MS.gene68300.t1 MTR_7g013200 26.419 458 242 15 13 400 5 437 3.55e-33 129
MS.gene68300.t1 MTR_5g072830 25.902 471 248 16 9 404 6 450 4.03e-33 129
MS.gene68300.t1 MTR_5g072820 25.106 470 247 15 12 404 9 450 2.21e-32 127
MS.gene68300.t1 MTR_7g013240 26.316 456 242 16 13 399 6 436 2.89e-32 127
MS.gene68300.t1 MTR_3g479470 26.667 480 251 15 1 391 1 468 4.22e-32 127
MS.gene68300.t1 MTR_6g014270 28.487 337 190 12 13 308 7 333 5.24e-32 127
MS.gene68300.t1 MTR_5g072810 25.000 476 257 16 5 404 4 455 5.80e-32 126
MS.gene68300.t1 MTR_8g059425 27.410 332 196 9 13 308 10 332 1.60e-31 125
MS.gene68300.t1 MTR_6g014187 27.198 364 213 14 13 335 10 362 1.62e-31 125
MS.gene68300.t1 MTR_6g011340 25.000 480 254 15 13 399 10 476 1.64e-31 125
MS.gene68300.t1 MTR_6g014200 29.254 335 188 12 13 308 7 331 2.51e-31 125
MS.gene68300.t1 MTR_6g014310 28.190 337 189 10 13 308 11 335 2.98e-31 125
MS.gene68300.t1 MTR_6g013960 27.410 332 198 11 13 308 10 334 3.15e-31 124
MS.gene68300.t1 MTR_0288s0020 27.327 333 186 9 9 308 6 315 3.30e-31 124
MS.gene68300.t1 MTR_3g031450 25.771 454 259 15 13 405 18 454 6.09e-31 124
MS.gene68300.t1 MTR_6g013680 28.495 372 224 14 58 399 12 371 8.44e-31 122
MS.gene68300.t1 MTR_3g031400 26.915 457 248 17 13 405 18 452 1.39e-30 122
MS.gene68300.t1 MTR_7g055710 28.099 363 218 13 3 335 1 350 1.62e-30 123
MS.gene68300.t1 MTR_6g014150 29.851 335 186 13 13 308 7 331 2.00e-30 122
MS.gene68300.t1 MTR_7g013220 24.520 469 248 13 13 400 5 448 8.93e-30 120
MS.gene68300.t1 MTR_6g013990 27.731 357 218 13 13 335 10 360 1.42e-29 120
MS.gene68300.t1 MTR_6g013900 28.228 333 193 12 13 308 10 333 1.61e-29 120
MS.gene68300.t1 MTR_6g013450 27.424 361 217 13 13 335 10 363 2.04e-29 119
MS.gene68300.t1 MTR_5g087620 27.989 368 210 13 13 335 10 367 2.21e-29 119
MS.gene68300.t1 MTR_5g072860 25.527 474 253 16 13 407 18 470 2.42e-29 119
MS.gene68300.t1 MTR_1g107325 26.185 401 231 9 12 402 7 352 3.34e-29 117
MS.gene68300.t1 MTR_6g014050 27.844 334 194 10 13 308 11 335 1.12e-28 117
MS.gene68300.t1 MTR_6g014020 27.679 336 192 11 13 308 10 334 2.96e-28 116
MS.gene68300.t1 MTR_5g072840 26.923 312 201 7 9 308 6 302 3.49e-28 115
MS.gene68300.t1 MTR_3g069690 25.708 459 257 12 12 402 7 449 3.54e-28 115
MS.gene68300.t1 MTR_7g070610 27.072 362 227 10 1 335 1 352 3.80e-28 116
MS.gene68300.t1 MTR_7g070660 28.841 371 212 13 3 349 1 343 4.30e-28 116
MS.gene68300.t1 MTR_6g014170 27.761 335 183 10 9 308 6 316 4.74e-28 115
MS.gene68300.t1 MTR_4g064987 32.372 312 177 14 14 308 9 303 8.47e-28 114
MS.gene68300.t1 MTR_6g013920 29.091 330 194 13 13 308 10 333 8.53e-28 115
MS.gene68300.t1 MTR_4g064987 31.475 305 183 12 14 308 9 297 1.84e-27 113
MS.gene68300.t1 MTR_0184s0040 24.435 487 252 12 11 404 19 482 3.09e-27 113
MS.gene68300.t1 MTR_0078s0190 24.435 487 252 12 11 404 19 482 3.09e-27 113
MS.gene68300.t1 MTR_8g012635 25.309 486 255 12 11 404 4 473 3.52e-27 113
MS.gene68300.t1 MTR_6g013435 29.811 265 163 7 148 399 49 303 4.35e-27 110
MS.gene68300.t1 MTR_8g012745 24.587 484 258 12 11 404 4 470 6.44e-27 112
MS.gene68300.t1 MTR_3g069710 24.034 466 270 11 4 402 3 451 3.29e-26 110
MS.gene68300.t1 MTR_5g031840 30.793 328 181 16 13 308 5 318 4.32e-26 110
MS.gene68300.t1 MTR_4g485630 28.000 350 203 15 7 324 3 335 4.54e-26 110
MS.gene68300.t1 MTR_7g047030 24.845 483 248 15 13 402 6 466 5.10e-26 109
MS.gene68300.t1 MTR_7g047270 24.845 483 248 15 13 402 6 466 5.10e-26 109
MS.gene68300.t1 MTR_0184s0030 24.477 478 259 13 12 402 5 467 2.43e-25 107
MS.gene68300.t1 MTR_6g014300 26.316 342 185 12 7 308 6 320 5.57e-25 107
MS.gene68300.t1 MTR_5g031860 25.420 476 259 16 13 406 12 473 7.77e-25 106
MS.gene68300.t1 MTR_7g070740 25.496 353 220 11 3 326 1 339 1.07e-24 106
MS.gene68300.t1 MTR_7g070860 25.051 491 248 21 3 402 1 462 1.37e-24 105
MS.gene68300.t1 MTR_0078s0010 23.819 487 260 14 13 408 6 472 1.43e-24 105
MS.gene68300.t1 MTR_5g031830 25.311 482 253 19 13 406 12 474 3.10e-24 104
MS.gene68300.t1 MTR_4g128720 22.993 461 270 11 12 404 14 457 4.41e-24 103
MS.gene68300.t1 MTR_7g070930 26.496 351 218 12 4 326 5 343 7.88e-24 103
MS.gene68300.t1 MTR_5g058320 27.324 355 209 14 13 335 10 347 9.26e-24 103
MS.gene68300.t1 MTR_7g070800 28.969 359 203 19 10 335 3 342 1.51e-23 102
MS.gene68300.t1 MTR_8g009050 28.070 342 198 13 11 328 4 321 1.57e-23 102
MS.gene68300.t1 MTR_8g077590 29.907 321 179 12 13 309 9 307 3.29e-23 101
MS.gene68300.t1 MTR_6g014240 28.399 331 168 16 12 308 6 301 3.79e-23 101
MS.gene68300.t1 MTR_7g071040 25.691 362 233 12 2 336 6 358 4.66e-23 101
MS.gene68300.t1 MTR_7g070780 23.819 508 264 15 3 407 1 488 8.90e-23 100
MS.gene68300.t1 MTR_5g090660 27.635 351 214 14 13 338 5 340 1.00e-22 100
MS.gene68300.t1 MTR_4g108250 26.975 367 221 15 3 335 1 354 1.41e-22 100
MS.gene68300.t1 MTR_0078s0060 23.014 491 250 14 11 402 4 465 1.50e-22 99.8
MS.gene68300.t1 MTR_6g033625 24.893 466 243 18 16 391 5 453 1.52e-22 99.8
MS.gene68300.t1 MTR_1g107340 28.571 245 157 5 8 236 3 245 1.73e-22 96.3
MS.gene68300.t1 MTR_8g465670 27.778 324 176 11 14 308 8 302 1.85e-22 99.4
MS.gene68300.t1 MTR_3g479610 25.161 310 165 7 148 399 9 309 3.12e-22 97.1
MS.gene68300.t1 MTR_8g009055 28.809 361 199 15 11 338 4 339 3.33e-22 98.6
MS.gene68300.t1 MTR_8g006710 23.566 488 259 14 9 404 2 467 4.88e-22 98.2
MS.gene68300.t1 MTR_8g008990 28.485 330 196 10 11 319 4 314 5.23e-22 98.2
MS.gene68300.t1 MTR_8g008990 41.333 75 44 0 324 398 390 464 4.37e-11 64.7
MS.gene68300.t1 MTR_8g006220 27.829 327 172 12 14 308 7 301 5.29e-22 98.2
MS.gene68300.t1 MTR_6g488280 23.663 486 242 15 10 396 3 458 5.41e-22 98.2
MS.gene68300.t1 MTR_0428s0010 23.663 486 242 15 10 396 3 458 5.41e-22 98.2
MS.gene68300.t1 MTR_8g066610 26.979 341 215 14 9 321 5 339 6.35e-22 98.2
MS.gene68300.t1 MTR_6g033615 25.541 462 231 16 16 391 5 439 6.39e-22 97.8
MS.gene68300.t1 MTR_7g117405 26.506 332 209 9 2 309 1 321 8.86e-22 97.4
MS.gene68300.t1 MTR_5g016660 27.554 323 201 10 15 312 12 326 9.05e-22 97.4
MS.gene68300.t1 MTR_5g098960 26.380 326 213 9 14 323 8 322 9.93e-22 97.1
MS.gene68300.t1 MTR_8g009063 27.164 335 192 11 1 308 1 310 1.37e-21 97.1
MS.gene68300.t1 MTR_5g090620 27.190 331 192 11 14 318 6 313 1.44e-21 97.1
MS.gene68300.t1 MTR_4g128690 22.863 468 269 11 7 404 9 454 1.57e-21 96.7
MS.gene68300.t1 MTR_0891s0010 25.170 294 157 6 173 408 7 295 2.27e-21 94.0
MS.gene68300.t1 MTR_7g071050 27.066 351 175 14 1 326 1 295 2.33e-21 95.9
MS.gene68300.t1 MTR_6g033725 25.672 335 168 10 134 400 138 459 2.51e-21 96.3
MS.gene68300.t1 MTR_0009s0240 26.377 345 212 12 9 326 3 332 3.51e-21 95.5
MS.gene68300.t1 MTR_8g074550 27.083 384 191 17 13 335 8 363 4.22e-21 95.9
MS.gene68300.t1 MTR_0078s0200 27.215 316 196 11 12 308 5 305 4.65e-21 93.6
MS.gene68300.t1 MTR_5g090630 27.273 319 184 10 13 308 5 298 4.92e-21 95.1
MS.gene68300.t1 MTR_5g090700 25.826 333 196 12 14 318 6 315 7.07e-21 94.7
MS.gene68300.t1 MTR_5g075440 27.660 329 191 13 12 315 9 315 1.22e-20 94.0
MS.gene68300.t1 MTR_2g098430 23.684 494 261 17 14 407 7 484 2.28e-20 93.6
MS.gene68300.t1 MTR_7g070910 24.451 364 233 13 3 336 1 352 2.71e-20 93.2
MS.gene68300.t1 MTR_6g033675 30.841 214 110 9 134 326 140 336 3.11e-20 92.8
MS.gene68300.t1 MTR_5g045970 24.242 495 264 21 10 405 13 495 4.25e-20 92.8
MS.gene68300.t1 MTR_5g040030 27.078 373 224 14 1 347 1 351 4.37e-20 92.4
MS.gene68300.t1 MTR_5g098930 25.378 331 179 10 12 308 4 300 4.74e-20 92.4
MS.gene68300.t1 MTR_3g009510 27.913 369 213 13 14 351 6 352 8.46e-20 91.7
MS.gene68300.t1 MTR_7g117170 27.607 326 176 12 14 308 16 312 1.99e-19 90.5
MS.gene68300.t1 MTR_6g033660 30.516 213 110 8 134 326 141 335 2.60e-19 90.1
MS.gene68300.t1 MTR_8g071070 23.409 487 259 17 9 402 3 468 3.63e-19 89.7
MS.gene68300.t1 MTR_8g006260 28.296 311 195 10 13 306 6 305 4.63e-19 89.4
MS.gene68300.t1 MTR_1g019510 27.302 315 195 10 11 308 4 301 4.82e-19 89.4
MS.gene68300.t1 MTR_8g012650 26.331 357 216 10 13 339 6 345 6.69e-19 89.0
MS.gene68300.t1 MTR_1g029540 25.836 329 195 12 7 315 8 307 9.48e-19 88.2
MS.gene68300.t1 MTR_7g102450 25.617 324 209 12 1 309 1 307 1.13e-18 88.2
MS.gene68300.t1 MTR_7g070810 26.882 372 203 18 1 335 1 340 1.27e-18 88.2
MS.gene68300.t1 MTR_8g006270 26.421 299 183 8 19 309 32 301 1.37e-18 87.8
MS.gene68300.t1 MTR_5g004940 33.696 184 82 5 259 402 194 377 1.39e-18 87.4
MS.gene68300.t1 MTR_5g004940 27.273 176 107 4 13 171 17 188 4.78e-16 79.7
MS.gene68300.t1 MTR_5g090580 25.568 352 220 11 14 338 6 342 2.03e-18 87.4
MS.gene68300.t1 MTR_8g009073 26.380 326 186 11 11 308 4 303 2.28e-18 87.4
MS.gene68300.t1 MTR_8g083300 37.037 135 76 4 14 141 8 140 2.34e-18 82.0
MS.gene68300.t1 MTR_5g045960 24.390 328 208 13 11 310 7 322 3.92e-18 86.7
MS.gene68300.t1 MTR_7g070940 25.205 365 217 14 1 335 1 339 4.08e-18 86.7
MS.gene68300.t1 MTR_0536s0020 25.672 335 203 11 14 321 19 334 6.97e-18 85.9
MS.gene68300.t1 MTR_8g006230 29.114 237 139 7 102 327 46 264 8.55e-18 83.6
MS.gene68300.t1 MTR_2g008225 25.287 348 224 11 2 326 4 338 1.01e-17 85.5
MS.gene68300.t1 MTR_8g027885 25.994 327 174 11 14 308 19 309 1.09e-17 85.1
MS.gene68300.t1 MTR_6g042310 25.434 346 224 12 2 326 4 336 1.30e-17 85.1
MS.gene68300.t1 MTR_5g090600 25.532 329 206 9 14 323 6 314 1.34e-17 84.7
MS.gene68300.t1 MTR_7g046490 26.101 318 190 10 13 308 6 300 2.79e-17 84.0
MS.gene68300.t1 MTR_2g008220 24.571 350 222 10 3 326 4 337 2.93e-17 84.0
MS.gene68300.t1 MTR_7g102550 24.152 501 251 22 9 401 5 484 4.11e-17 83.6
MS.gene68300.t1 MTR_6g035295 25.672 335 195 12 11 310 10 325 4.14e-17 83.6
MS.gene68300.t1 MTR_8g009067 28.037 321 187 11 11 308 4 303 5.22e-17 83.2
MS.gene68300.t1 MTR_6g023665 25.231 325 184 11 14 308 14 309 6.04e-17 82.8
MS.gene68300.t1 MTR_6g005600 25.076 331 180 12 13 308 6 303 6.10e-17 82.8
MS.gene68300.t1 MTR_4g082810 25.876 371 213 12 12 352 6 344 6.60e-17 82.4
MS.gene68300.t1 MTR_3g479620 32.143 140 83 2 13 140 6 145 1.01e-16 77.8
MS.gene68300.t1 MTR_2g008226 27.195 353 204 15 9 325 6 341 1.31e-16 82.0
MS.gene68300.t1 MTR_4g117960 25.373 335 206 13 17 321 15 335 1.32e-16 82.0
MS.gene68300.t1 MTR_7g070870 24.928 349 198 13 12 326 18 336 1.55e-16 81.6
MS.gene68300.t1 MTR_5g039900 23.754 341 209 11 1 308 1 323 1.90e-16 81.6
MS.gene68300.t1 MTR_6g036650 27.324 355 203 16 8 326 8 343 2.10e-16 81.3
MS.gene68300.t1 MTR_5g090670 24.138 319 203 9 14 308 6 309 2.26e-16 81.3
MS.gene68300.t1 MTR_7g470610 28.696 230 128 10 117 335 3 207 3.60e-16 79.0
MS.gene68300.t1 MTR_7g070583 28.696 230 128 10 117 335 3 207 3.60e-16 79.0
MS.gene68300.t1 MTR_4g117980 25.723 346 193 12 17 321 15 337 4.81e-16 80.1
MS.gene68300.t1 MTR_5g067170 23.432 303 214 6 17 307 15 311 5.24e-16 80.1
MS.gene68300.t1 MTR_2g046750 22.969 357 221 13 14 339 6 339 6.38e-16 79.7
MS.gene68300.t1 MTR_6g035185 23.123 333 218 10 17 321 15 337 6.40e-16 79.7
MS.gene68300.t1 MTR_5g027210 25.150 334 194 13 14 308 5 321 6.57e-16 79.7
MS.gene68300.t1 MTR_4g008630 23.120 359 216 10 7 338 8 333 7.64e-16 79.7
MS.gene68300.t1 MTR_8g008970 25.157 318 200 10 11 308 4 303 7.94e-16 80.1
MS.gene68300.t1 MTR_8g006730 24.793 363 227 13 9 349 2 340 9.47e-16 79.3
MS.gene68300.t1 MTR_4g082820 26.630 368 212 12 12 352 6 342 1.13e-15 79.0
MS.gene68300.t1 MTR_5g072850 24.648 426 225 19 13 399 10 378 1.27e-15 78.6
MS.gene68300.t1 MTR_6g052375 30.000 240 130 9 148 366 15 237 1.29e-15 77.8
MS.gene68300.t1 MTR_4g117890 23.099 355 215 9 14 335 14 343 1.37e-15 79.0
MS.gene68300.t1 MTR_4g485640 24.130 460 251 15 23 399 219 663 1.62e-15 79.0
MS.gene68300.t1 MTR_2g034990 23.871 310 206 8 17 307 15 313 1.81e-15 78.6
MS.gene68300.t1 MTR_4g024020 25.740 338 197 14 12 312 8 328 2.27e-15 78.2
MS.gene68300.t1 MTR_4g485590 24.926 337 199 13 13 326 9 314 2.84e-15 77.4
MS.gene68300.t1 MTR_8g027870 25.545 321 183 11 14 308 19 309 3.21e-15 77.8
MS.gene68300.t1 MTR_5g070040 24.277 346 206 12 14 324 12 336 6.28e-15 76.6
MS.gene68300.t1 MTR_8g044140 29.167 240 145 12 111 335 87 316 6.51e-15 76.6
MS.gene68300.t1 MTR_4g077960 25.301 332 195 13 23 325 2 309 1.42e-14 75.5
MS.gene68300.t1 MTR_4g117950 26.183 317 179 12 17 307 10 297 2.41e-14 75.1
MS.gene68300.t1 MTR_6g078320 21.922 333 205 10 13 308 11 325 3.40e-14 74.7
MS.gene68300.t1 MTR_6g014190 31.884 138 89 4 173 308 7 141 3.85e-14 72.8
MS.gene68300.t1 MTR_4g485620 25.680 331 210 13 27 331 3 323 4.22e-14 74.3
MS.gene68300.t1 MTR_0199s0010 24.490 245 147 7 9 221 6 244 4.55e-14 72.4
MS.gene68300.t1 MTR_1g040310 27.615 239 147 9 111 335 125 351 7.10e-14 73.6
MS.gene68300.t1 MTR_7g102560 24.179 335 201 13 12 312 8 323 1.09e-13 73.2
MS.gene68300.t1 MTR_7g102460 24.850 334 203 15 12 312 8 326 1.80e-13 72.4
MS.gene68300.t1 MTR_2g040530 23.304 339 207 11 14 322 6 321 1.82e-13 72.4
MS.gene68300.t1 MTR_8g090095 23.056 360 202 13 18 335 30 356 2.17e-13 72.0
MS.gene68300.t1 MTR_8g009067 30.151 199 113 7 120 308 3 185 2.18e-13 71.2
MS.gene68300.t1 MTR_6g035265 25.000 332 208 12 17 331 15 322 2.78e-13 71.6
MS.gene68300.t1 MTR_8g068340 23.907 343 220 11 12 326 11 340 4.18e-13 71.2
MS.gene68300.t1 MTR_4g031800 27.143 350 209 15 14 335 10 341 4.67e-13 70.9
MS.gene68300.t1 MTR_4g118000 23.952 334 201 12 17 321 16 325 4.80e-13 70.9
MS.gene68300.t1 MTR_8g032950 23.464 358 217 15 14 335 13 349 1.05e-12 70.1
MS.gene68300.t1 MTR_5g019580 23.385 325 208 9 9 308 3 311 2.69e-12 68.6
MS.gene68300.t1 MTR_8g009073 31.169 154 84 6 161 308 37 174 4.99e-12 67.0
MS.gene68300.t1 MTR_5g090610 22.930 314 199 9 13 308 5 293 6.47e-12 67.4
MS.gene68300.t1 MTR_7g012120 25.566 309 199 12 17 307 20 315 7.97e-12 67.4
MS.gene68300.t1 MTR_0536s0010 26.184 359 197 18 3 324 11 338 9.56e-12 67.0
MS.gene68300.t1 MTR_5g090690 23.770 244 137 7 73 308 35 237 1.17e-11 66.2
MS.gene68300.t1 MTR_2g046820 23.889 360 211 12 14 339 6 336 2.26e-11 65.9
MS.gene68300.t1 MTR_8g007585 26.623 154 98 4 9 149 6 157 3.40e-11 65.1
MS.gene68300.t1 MTR_2g035020 23.364 321 204 8 12 307 10 313 9.92e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68300.t1 AT1G24100 43.363 452 190 7 13 402 11 458 1.58e-122 363
MS.gene68300.t1 AT2G43820 41.871 449 193 8 13 402 7 446 6.39e-116 346
MS.gene68300.t1 AT2G43840 42.350 451 188 10 13 402 7 446 1.29e-112 337
MS.gene68300.t1 AT2G43840 42.129 451 189 10 13 402 7 446 1.41e-111 335
MS.gene68300.t1 AT1G05675 38.616 448 210 5 13 399 6 449 6.74e-99 303
MS.gene68300.t1 AT1G05680 38.085 449 211 5 13 399 6 449 2.06e-97 299
MS.gene68300.t1 AT2G31750 38.000 450 210 7 13 399 8 451 3.50e-92 285
MS.gene68300.t1 AT2G31750 37.500 456 216 7 13 405 8 457 1.18e-91 285
MS.gene68300.t1 AT2G31790 36.283 452 225 6 13 403 8 457 2.97e-90 280
MS.gene68300.t1 AT3G21560 28.078 463 258 10 13 402 12 472 1.75e-58 199
MS.gene68300.t1 AT4G15480 28.615 325 208 6 1 308 7 324 1.21e-48 172
MS.gene68300.t1 AT4G15490 30.120 332 192 8 9 313 4 322 4.31e-48 171
MS.gene68300.t1 AT2G23260 28.947 456 248 14 13 403 10 454 1.32e-46 166
MS.gene68300.t1 AT4G15500 31.429 315 197 8 13 313 9 318 2.54e-45 163
MS.gene68300.t1 AT2G23250 27.928 444 248 13 22 405 7 438 4.31e-45 162
MS.gene68300.t1 AT1G22360 26.349 482 249 14 13 402 10 477 4.15e-44 160
MS.gene68300.t1 AT1G22370 30.058 346 218 8 13 335 13 357 1.67e-42 155
MS.gene68300.t1 AT1G22380 31.549 355 206 13 13 335 13 362 3.79e-42 155
MS.gene68300.t1 AT1G78270 26.186 485 258 13 13 408 13 486 2.31e-41 153
MS.gene68300.t1 AT2G36970 24.528 477 261 12 13 404 10 472 4.53e-41 152
MS.gene68300.t1 AT1G05530 32.268 313 178 8 13 309 5 299 6.84e-41 151
MS.gene68300.t1 AT1G05530 51.316 76 36 1 327 402 380 454 4.93e-16 80.1
MS.gene68300.t1 AT2G28080 28.097 331 201 7 17 320 22 342 2.95e-40 150
MS.gene68300.t1 AT1G05560 32.448 339 201 10 13 339 5 327 7.83e-40 148
MS.gene68300.t1 AT1G05560 45.238 84 45 1 327 410 377 459 7.11e-15 76.6
MS.gene68300.t1 AT1G22360 25.417 480 240 14 13 400 10 463 1.51e-39 147
MS.gene68300.t1 AT1G05560 32.448 339 201 10 13 339 55 377 1.68e-39 148
MS.gene68300.t1 AT1G05560 45.238 84 45 1 327 410 427 509 6.83e-15 77.0
MS.gene68300.t1 AT1G22400 29.261 352 219 8 13 335 13 363 8.00e-39 146
MS.gene68300.t1 AT1G22340 27.829 327 200 8 13 308 13 334 5.43e-38 144
MS.gene68300.t1 AT4G14090 26.124 467 264 16 1 400 1 453 3.76e-37 140
MS.gene68300.t1 AT4G15550 28.011 357 203 11 13 339 13 345 6.62e-35 135
MS.gene68300.t1 AT3G02100 26.201 458 255 14 13 400 13 457 2.99e-33 130
MS.gene68300.t1 AT2G30150 26.350 463 249 16 13 404 13 454 1.31e-32 128
MS.gene68300.t1 AT1G10400 24.736 473 262 14 12 404 6 464 3.64e-31 124
MS.gene68300.t1 AT3G46670 25.918 463 247 15 13 402 9 448 5.56e-31 124
MS.gene68300.t1 AT2G30150 26.144 459 247 16 17 404 1 438 5.90e-31 123
MS.gene68300.t1 AT2G15490 24.644 491 253 14 11 402 5 477 4.90e-30 121
MS.gene68300.t1 AT1G01420 26.611 481 250 15 3 397 1 464 2.80e-29 119
MS.gene68300.t1 AT1G01420 26.793 474 244 15 10 397 5 461 4.05e-29 119
MS.gene68300.t1 AT2G15490 24.089 494 255 13 11 402 5 480 5.53e-29 118
MS.gene68300.t1 AT3G46650 25.813 461 238 14 13 405 10 434 1.42e-28 116
MS.gene68300.t1 AT2G15480 27.966 354 206 14 5 321 2 343 7.24e-28 115
MS.gene68300.t1 AT2G15480 27.966 354 206 14 5 321 2 343 8.26e-28 115
MS.gene68300.t1 AT5G59590 24.204 471 245 16 13 402 10 449 3.65e-27 112
MS.gene68300.t1 AT2G30140 29.664 327 180 12 9 311 9 309 4.56e-27 112
MS.gene68300.t1 AT5G05870 24.947 469 261 13 9 403 4 455 5.26e-27 112
MS.gene68300.t1 AT2G30140 29.448 326 181 12 9 311 9 308 6.65e-27 112
MS.gene68300.t1 AT4G01070 28.923 325 175 9 13 308 8 305 3.11e-26 108
MS.gene68300.t1 AT4G01070 28.923 325 175 9 13 308 8 305 4.93e-26 110
MS.gene68300.t1 AT5G17050 23.504 468 261 12 13 404 12 458 5.26e-26 109
MS.gene68300.t1 AT1G73880 26.531 490 249 19 2 404 3 468 1.00e-25 108
MS.gene68300.t1 AT5G59580 24.841 471 253 18 13 408 9 453 1.28e-25 108
MS.gene68300.t1 AT4G34131 23.742 497 265 21 5 404 2 481 1.87e-25 108
MS.gene68300.t1 AT5G17040 23.904 456 264 11 11 402 3 439 3.48e-24 104
MS.gene68300.t1 AT3G46660 29.114 316 181 11 14 308 15 308 5.42e-24 103
MS.gene68300.t1 AT2G36760 26.235 324 201 9 12 308 13 325 2.09e-23 102
MS.gene68300.t1 AT5G38010 27.500 320 186 8 13 308 10 307 3.51e-23 101
MS.gene68300.t1 AT5G03490 26.190 336 206 11 13 326 19 334 3.93e-23 101
MS.gene68300.t1 AT4G34135 24.507 355 225 12 5 326 3 347 8.56e-23 100
MS.gene68300.t1 AT2G36780 25.978 358 217 15 4 326 5 349 1.01e-22 100
MS.gene68300.t1 AT1G01390 27.507 349 207 10 10 326 22 356 1.49e-22 100
MS.gene68300.t1 AT1G01390 27.507 349 207 10 10 326 5 339 1.58e-22 99.8
MS.gene68300.t1 AT5G05880 23.368 475 257 17 9 404 4 450 1.69e-22 99.4
MS.gene68300.t1 AT3G46690 26.537 309 199 7 13 308 9 302 5.79e-22 97.8
MS.gene68300.t1 AT1G30530 23.094 459 270 13 13 405 12 453 9.76e-22 97.4
MS.gene68300.t1 AT2G36770 24.090 357 225 12 4 326 5 349 2.96e-21 96.3
MS.gene68300.t1 AT3G46720 26.096 456 245 18 14 402 10 440 4.66e-21 95.1
MS.gene68300.t1 AT5G49690 27.485 342 198 14 12 326 9 327 4.90e-21 95.1
MS.gene68300.t1 AT2G36750 27.299 348 208 14 12 326 9 344 9.55e-21 94.7
MS.gene68300.t1 AT3G46680 25.484 310 201 7 13 308 9 302 9.69e-21 94.4
MS.gene68300.t1 AT1G22370 31.429 175 116 4 164 335 14 187 1.20e-20 92.4
MS.gene68300.t1 AT5G05900 26.646 319 200 12 9 308 4 307 1.25e-20 94.0
MS.gene68300.t1 AT3G16520 28.085 235 140 8 108 326 113 334 1.29e-20 94.0
MS.gene68300.t1 AT3G16520 28.085 235 140 8 108 326 113 334 1.35e-20 94.0
MS.gene68300.t1 AT3G16520 28.085 235 140 8 108 326 113 334 1.36e-20 94.0
MS.gene68300.t1 AT2G23210 27.240 279 175 12 13 277 10 274 8.42e-20 89.4
MS.gene68300.t1 AT5G26310 28.213 319 191 13 13 313 7 305 1.32e-19 91.3
MS.gene68300.t1 AT4G34138 22.382 487 270 18 10 403 8 479 1.94e-19 90.5
MS.gene68300.t1 AT2G26480 25.078 319 187 10 13 308 8 297 5.95e-19 89.0
MS.gene68300.t1 AT2G36800 24.033 362 224 14 2 326 1 348 1.43e-18 88.2
MS.gene68300.t1 AT3G46700 25.316 316 189 13 13 308 9 297 1.46e-18 87.8
MS.gene68300.t1 AT5G53990 21.535 469 262 15 10 404 3 439 1.68e-18 87.4
MS.gene68300.t1 AT5G38040 29.022 317 165 15 21 308 18 303 1.89e-18 87.4
MS.gene68300.t1 AT1G51210 26.205 332 206 13 13 326 20 330 2.27e-18 87.0
MS.gene68300.t1 AT5G17030 22.912 467 264 15 13 404 12 457 2.42e-18 87.0
MS.gene68300.t1 AT3G21800 24.390 369 224 10 10 349 2 344 3.38e-18 87.0
MS.gene68300.t1 AT3G55710 24.573 468 252 17 14 402 9 454 1.31e-17 85.1
MS.gene68300.t1 AT5G05860 24.522 314 211 9 6 308 2 300 1.58e-17 84.7
MS.gene68300.t1 AT3G11340 20.395 456 275 13 14 402 10 444 1.62e-17 84.7
MS.gene68300.t1 AT5G65550 27.557 352 205 16 12 332 8 340 2.24e-17 84.3
MS.gene68300.t1 AT5G12890 25.469 373 209 13 10 335 7 357 3.24e-17 84.0
MS.gene68300.t1 AT5G66690 26.220 328 198 12 13 319 7 311 1.25e-16 82.0
MS.gene68300.t1 AT5G05890 20.339 472 279 13 9 404 4 454 2.36e-16 81.3
MS.gene68300.t1 AT3G53150 25.294 340 198 14 10 312 19 339 4.13e-16 80.5
MS.gene68300.t1 AT3G50740 25.641 351 200 12 13 325 7 334 4.77e-16 80.5
MS.gene68300.t1 AT3G21780 22.905 358 234 10 12 349 3 338 1.67e-15 78.6
MS.gene68300.t1 AT3G21790 24.699 332 193 12 14 310 5 314 9.79e-15 76.3
MS.gene68300.t1 AT2G36790 25.419 358 225 14 1 326 1 348 1.13e-14 76.3
MS.gene68300.t1 AT3G53160 25.698 358 208 17 9 326 4 343 1.20e-14 75.9
MS.gene68300.t1 AT3G55700 22.343 461 269 16 13 402 8 450 1.25e-14 75.9
MS.gene68300.t1 AT1G64910 21.008 476 268 17 9 407 2 446 1.56e-14 75.5
MS.gene68300.t1 AT2G29740 24.629 337 198 9 9 308 4 321 2.91e-14 74.7
MS.gene68300.t1 AT3G21760 22.849 372 216 12 12 338 3 348 3.74e-14 74.3
MS.gene68300.t1 AT5G37950 26.724 232 133 6 92 308 70 279 6.41e-14 73.2
MS.gene68300.t1 AT5G54010 23.032 343 212 11 9 326 2 317 1.08e-13 72.8
MS.gene68300.t1 AT2G29710 24.629 337 216 13 11 321 3 327 1.92e-13 72.4
MS.gene68300.t1 AT5G37950 27.193 228 131 7 92 308 70 273 2.24e-13 71.2
MS.gene68300.t1 AT3G29630 22.930 471 258 18 13 406 6 448 3.26e-13 71.6
MS.gene68300.t1 AT2G29750 22.500 360 219 12 9 326 4 345 4.13e-13 71.2
MS.gene68300.t1 AT2G29730 23.599 339 219 12 10 321 2 327 5.57e-13 70.9
MS.gene68300.t1 AT1G64920 23.009 339 211 13 9 326 2 311 5.91e-13 70.9
MS.gene68300.t1 AT4G36770 26.364 330 180 13 11 308 2 300 8.05e-13 70.1
MS.gene68300.t1 AT3G21750 22.284 359 235 10 12 349 3 338 9.32e-13 70.1
MS.gene68300.t1 AT4G09500 21.687 332 216 10 13 326 6 311 1.49e-11 66.2
MS.gene68300.t1 AT2G15490 24.725 182 112 4 11 168 5 185 2.22e-11 64.3
MS.gene68300.t1 AT4G27570 19.831 474 263 14 13 404 7 445 6.80e-11 64.3

Find 81 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATACAATCTTCACTTAA+TGG 0.158647 5.2:+26142710 None:intergenic
GCTAAACAACATGGGATTTA+TGG 0.227646 5.2:-26143280 MS.gene68300:CDS
AAGGGTATGGAGCAAATTTA+TGG 0.263548 5.2:-26142736 MS.gene68300:CDS
TGAAAGTTACCCTGCTTATA+TGG 0.273177 5.2:-26143104 MS.gene68300:CDS
TAAGTGAAGATTGTATTAAT+TGG 0.280512 5.2:-26142706 MS.gene68300:CDS
AAAGTGAAGTGAATTTCTTA+TGG 0.295838 5.2:-26142583 MS.gene68300:CDS
GTTCCTTCTGCTTACTTAGA+TGG 0.303927 5.2:-26142776 MS.gene68300:CDS
AATACATTTGAAGCTTTAGA+AGG 0.325832 5.2:-26143028 MS.gene68300:CDS
GAACATTGTTGTTGTAGTTT+TGG 0.330597 5.2:+26143635 None:intergenic
ATATAAGCAGGGTAACTTTC+AGG 0.345186 5.2:+26143106 None:intergenic
CAAATTTAAATCAAGCTGAT+TGG 0.345604 5.2:-26143060 MS.gene68300:CDS
GAGAAAGAGTTCAACATTGT+TGG 0.352328 5.2:+26143423 None:intergenic
CAAATAGAAGAGTTGGCTTT+GGG 0.353033 5.2:-26142614 MS.gene68300:CDS
AATGAGGTTTGAGAGTGTTT+TGG 0.357948 5.2:+26143378 None:intergenic
ATGTGTCCTTGTGCTGGGTA+TGG 0.359401 5.2:+26143598 None:intergenic
ATAAAATCTTTGTATCCCTT+TGG 0.360700 5.2:+26142530 None:intergenic
AAGTGAAGTGAATTTCTTAT+GGG 0.361840 5.2:-26142582 MS.gene68300:CDS
TCAGTTGTGTATATCTCCTT+TGG 0.374088 5.2:-26142662 MS.gene68300:CDS
AAAGAAGTGAAGTGATTAGA+AGG 0.376196 5.2:-26142229 MS.gene68300:CDS
AGAATTTATGTTGAGTTTGA+AGG 0.376290 5.2:-26142267 MS.gene68300:CDS
GGACTAATGTGTCCTTGTGC+TGG 0.381138 5.2:+26143592 None:intergenic
TCTGATGGGTTCGACGAATC+CGG 0.389070 5.2:-26143457 MS.gene68300:CDS
TTAGAGGAAATTTGGGAAGT+TGG 0.394349 5.2:-26142332 MS.gene68300:CDS
TAAGAATATTGACGAGTTTG+TGG 0.399865 5.2:-26142147 MS.gene68300:CDS
ACAAATAGAAGAGTTGGCTT+TGG 0.406858 5.2:-26142615 MS.gene68300:CDS
TGTGTCCTTGTGCTGGGTAT+GGG 0.433513 5.2:+26143599 None:intergenic
GTATATCTCCTTTGGAAGCA+TGG 0.437333 5.2:-26142654 MS.gene68300:CDS
AGGCCAAAAGAGGATGAAAA+TGG 0.445376 5.2:-26142305 MS.gene68300:CDS
ATCAAAGGCAATTGATCTAC+TGG 0.448166 5.2:+26143184 None:intergenic
CTCACTTCATTCAAAACCAA+TGG 0.450750 5.2:-26143403 MS.gene68300:CDS
CAATTGCCTTTGATTGTACC+TGG 0.453482 5.2:-26143175 MS.gene68300:CDS
ATTGGTTCGACAGAGATGTT+TGG 0.459900 5.2:+26143481 None:intergenic
TTTGACTAACACAAATAAGA+TGG 0.461412 5.2:-26142120 MS.gene68300:CDS
GACTAATGTGTCCTTGTGCT+GGG 0.469831 5.2:+26143593 None:intergenic
TTTGTATTATAGGTTGTGAA+AGG 0.472117 5.2:-26142839 MS.gene68300:intron
TGCTAAATTGATTGGTCCAA+TGG 0.474034 5.2:-26142798 MS.gene68300:CDS
TCAGGAAATCTTATAAAACT+TGG 0.478491 5.2:+26143124 None:intergenic
AACTTCATAGCCATATAAGC+AGG 0.478952 5.2:+26143094 None:intergenic
ATTGGACCAATCAATTTAGC+AGG 0.479265 5.2:+26142800 None:intergenic
TCGTCGAACCCATCAGAGAT+TGG 0.480355 5.2:+26143463 None:intergenic
ATGTTCCCTGCTAAATTGAT+TGG 0.484846 5.2:-26142806 MS.gene68300:CDS
ATCAGAACAAATAGAAGAGT+TGG 0.487703 5.2:-26142621 MS.gene68300:CDS
GCTAGGGATGCTGTTTCTGA+AGG 0.493618 5.2:-26142182 MS.gene68300:CDS
TCATAGACAATGCAAGTGAT+TGG 0.505206 5.2:+26143331 None:intergenic
ATCAAAGGAGACAAAGGGTA+TGG 0.516111 5.2:-26142749 MS.gene68300:CDS
TTAGAAGGAATGCTAGTGAA+TGG 0.522513 5.2:-26142214 MS.gene68300:CDS
AGTTTGAAGGTTGTGATGGA+TGG 0.527440 5.2:-26142254 MS.gene68300:CDS
TTGTATTATAGGTTGTGAAA+GGG 0.528055 5.2:-26142838 MS.gene68300:intron
TCTGTCGAACCAATCTCTGA+TGG 0.530114 5.2:-26143472 MS.gene68300:CDS
GTGAATGGAAGAAGTTGGCT+AGG 0.530432 5.2:-26142199 MS.gene68300:CDS
GGAAGATCTCTAGAATTCAA+TGG 0.531119 5.2:+26143145 None:intergenic
GTTGAGTTTGAAGGTTGTGA+TGG 0.533946 5.2:-26142258 MS.gene68300:CDS
CTTGATGTTGCTAAACAACA+TGG 0.541379 5.2:-26143289 MS.gene68300:CDS
TGCTAGTGAATGGAAGAAGT+TGG 0.547570 5.2:-26142204 MS.gene68300:CDS
TACTTAGATGGAAGAATCAA+AGG 0.552258 5.2:-26142764 MS.gene68300:CDS
GGAAGAATCAAAGGAGACAA+AGG 0.555117 5.2:-26142755 MS.gene68300:CDS
GAGCAAGGAAAATTACCAAA+GGG 0.556790 5.2:-26142545 MS.gene68300:CDS
AAGTAAGCAGAAGGAACCAT+TGG 0.560336 5.2:+26142782 None:intergenic
GAAGAATCAAAGGAGACAAA+GGG 0.563073 5.2:-26142754 MS.gene68300:CDS
GGAAGACCAGGTACAATCAA+AGG 0.565814 5.2:+26143169 None:intergenic
CTGTCGAACCAATCTCTGAT+GGG 0.568980 5.2:-26143471 MS.gene68300:CDS
TTGACTAACACAAATAAGAT+GGG 0.572178 5.2:-26142119 MS.gene68300:CDS
AGTTGGAGTGAGGCCAAAAG+AGG 0.574075 5.2:-26142315 MS.gene68300:CDS
GAATTCAATGGAGGAAGACC+AGG 0.574734 5.2:+26143157 None:intergenic
ATTTGAAGCTTTAGAAGGAG+AGG 0.576940 5.2:-26143023 MS.gene68300:intron
CTTCCATCTAAGTAAGCAGA+AGG 0.580606 5.2:+26142773 None:intergenic
GTAATGGGTTGTTGCAAATG+TGG 0.584893 5.2:+26143525 None:intergenic
AGGGATGCTGTTTCTGAAGG+AGG 0.610192 5.2:-26142179 MS.gene68300:CDS
TAAAGAAACCATGCTTCCAA+AGG 0.612065 5.2:+26142646 None:intergenic
AGAGCAAGGAAAATTACCAA+AGG 0.618274 5.2:-26142546 MS.gene68300:CDS
TGAATGGAAGAAGTTGGCTA+GGG 0.620033 5.2:-26142198 MS.gene68300:CDS
ACTTCATAGCCATATAAGCA+GGG 0.620841 5.2:+26143095 None:intergenic
ATATACACAACTGATTGTGA+TGG 0.621040 5.2:+26142671 None:intergenic
TTAGCAACATCAAGTGCCCA+AGG 0.641911 5.2:+26143298 None:intergenic
TTGGACCAATCAATTTAGCA+GGG 0.642417 5.2:+26142801 None:intergenic
AAATTTGGGAAGTTGGAGTG+AGG 0.649483 5.2:-26142325 MS.gene68300:CDS
TTGATGTTGCTAAACAACAT+GGG 0.649754 5.2:-26143288 MS.gene68300:CDS
AAGATGGGAAATGATTTGAG+TGG 0.669554 5.2:-26142104 MS.gene68300:CDS
GTGATCCCATACCCAGCACA+AGG 0.680626 5.2:-26143604 MS.gene68300:CDS
TTCGACAGAGATGTTTGGTG+CGG 0.690908 5.2:+26143486 None:intergenic
AGATCTCTAGAATTCAATGG+AGG 0.691278 5.2:+26143148 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATAAAATATTTGATATT+TGG - chr5.2:26142784-26142803 MS.gene68300:CDS 10.0%
!!! AAAGATTTTATCAAAGAAAA+GGG - chr5.2:26143228-26143247 MS.gene68300:CDS 15.0%
!!! CAATTTTCTTTTTGTATTAT+AGG - chr5.2:26142897-26142916 MS.gene68300:intron 15.0%
!!! TCAAATATTTTATTCATGAA+TGG + chr5.2:26142780-26142799 None:intergenic 15.0%
!! AAAATTCATAAGAGAAAGAT+TGG + chr5.2:26142853-26142872 None:intergenic 20.0%
!! TAAGTGAAGATTGTATTAAT+TGG - chr5.2:26143040-26143059 MS.gene68300:CDS 20.0%
!! TCGATAAAGATTAATGTATT+TGG + chr5.2:26142830-26142849 None:intergenic 20.0%
!! TTAATACAATCTTCACTTAA+TGG + chr5.2:26143039-26143058 None:intergenic 20.0%
!!! AAACTAATCTTTTTGAGAAT+TGG + chr5.2:26142186-26142205 None:intergenic 20.0%
!!! AAAGTTTTTAGAGGAAATTT+GGG - chr5.2:26143407-26143426 MS.gene68300:CDS 20.0%
!!! CAAAGATTTTATCAAAGAAA+AGG - chr5.2:26143227-26143246 MS.gene68300:CDS 20.0%
!!! CTTTCTCTTATGAATTTTAA+CGG - chr5.2:26142855-26142874 MS.gene68300:intron 20.0%
!!! TCAAAAAGATTAGTTTCAAA+AGG - chr5.2:26142190-26142209 MS.gene68300:CDS 20.0%
! AAAGTGAAGTGAATTTCTTA+TGG - chr5.2:26143163-26143182 MS.gene68300:CDS 25.0%
! AAGTGAAGTGAATTTCTTAT+GGG - chr5.2:26143164-26143183 MS.gene68300:CDS 25.0%
! AGAATTTATGTTGAGTTTGA+AGG - chr5.2:26143479-26143498 MS.gene68300:CDS 25.0%
! ATAAAATCTTTGTATCCCTT+TGG + chr5.2:26143219-26143238 None:intergenic 25.0%
! CAAATTTAAATCAAGCTGAT+TGG - chr5.2:26142686-26142705 MS.gene68300:CDS 25.0%
! TCAGGAAATCTTATAAAACT+TGG + chr5.2:26142625-26142644 None:intergenic 25.0%
! TTGACTAACACAAATAAGAT+GGG - chr5.2:26143627-26143646 MS.gene68300:CDS 25.0%
! TTGTATTATAGGTTGTGAAA+GGG - chr5.2:26142908-26142927 MS.gene68300:intron 25.0%
! TTTGACTAACACAAATAAGA+TGG - chr5.2:26143626-26143645 MS.gene68300:CDS 25.0%
! TTTGTATTATAGGTTGTGAA+AGG - chr5.2:26142907-26142926 MS.gene68300:intron 25.0%
!! AAAAGGGTATAATTGTAACA+TGG - chr5.2:26143244-26143263 MS.gene68300:CDS 25.0%
!! GATAGATTTTACAGTGTAAT+GGG + chr5.2:26142239-26142258 None:intergenic 25.0%
!! TGATAGATTTTACAGTGTAA+TGG + chr5.2:26142240-26142259 None:intergenic 25.0%
!! TGATATTTGGTTGATGTATT+TGG - chr5.2:26142797-26142816 MS.gene68300:CDS 25.0%
!!! AATACATTTGAAGCTTTAGA+AGG - chr5.2:26142718-26142737 MS.gene68300:CDS 25.0%
!!! ATTTTTTGTCGTATACATCA+TGG - chr5.2:26142526-26142545 MS.gene68300:CDS 25.0%
!!! CAAAGTTTTTAGAGGAAATT+TGG - chr5.2:26143406-26143425 MS.gene68300:CDS 25.0%
!!! TTTTTTGGTGTTTTTGAATG+AGG + chr5.2:26142387-26142406 None:intergenic 25.0%
AAAGAAGTGAAGTGATTAGA+AGG - chr5.2:26143517-26143536 MS.gene68300:CDS 30.0%
ATATACACAACTGATTGTGA+TGG + chr5.2:26143078-26143097 None:intergenic 30.0%
ATCAGAACAAATAGAAGAGT+TGG - chr5.2:26143125-26143144 MS.gene68300:CDS 30.0%
GTGTAACCAACTTGAATTAT+TGG - chr5.2:26143266-26143285 MS.gene68300:CDS 30.0%
TAAGAATATTGACGAGTTTG+TGG - chr5.2:26143599-26143618 MS.gene68300:CDS 30.0%
TACTTAGATGGAAGAATCAA+AGG - chr5.2:26142982-26143001 MS.gene68300:intron 30.0%
TTGATGTTGCTAAACAACAT+GGG - chr5.2:26142458-26142477 MS.gene68300:intron 30.0%
! CTATGATTCTTTTCTACCTT+GGG - chr5.2:26142432-26142451 MS.gene68300:intron 30.0%
! TCTATGATTCTTTTCTACCT+TGG - chr5.2:26142431-26142450 MS.gene68300:intron 30.0%
!! CTTTTTGAGAATTGGATTAG+TGG + chr5.2:26142178-26142197 None:intergenic 30.0%
!! GAACATTGTTGTTGTAGTTT+TGG + chr5.2:26142114-26142133 None:intergenic 30.0%
!!! TGATTGGTGTTGAAGTTTTT+TGG + chr5.2:26142402-26142421 None:intergenic 30.0%
AACTTCATAGCCATATAAGC+AGG + chr5.2:26142655-26142674 None:intergenic 35.0%
AAGATGGGAAATGATTTGAG+TGG - chr5.2:26143642-26143661 MS.gene68300:CDS 35.0%
ACTTCATAGCCATATAAGCA+GGG + chr5.2:26142654-26142673 None:intergenic 35.0%
AGAGCAAGGAAAATTACCAA+AGG - chr5.2:26143200-26143219 MS.gene68300:CDS 35.0%
ATATAAGCAGGGTAACTTTC+AGG + chr5.2:26142643-26142662 None:intergenic 35.0%
ATCAAAGGCAATTGATCTAC+TGG + chr5.2:26142565-26142584 None:intergenic 35.0%
ATGTTCCCTGCTAAATTGAT+TGG - chr5.2:26142940-26142959 MS.gene68300:intron 35.0%
ATTGGACCAATCAATTTAGC+AGG + chr5.2:26142949-26142968 None:intergenic 35.0%
CATGTGCCAATAATTCAAGT+TGG + chr5.2:26143275-26143294 None:intergenic 35.0%
CTCACTTCATTCAAAACCAA+TGG - chr5.2:26142343-26142362 MS.gene68300:CDS 35.0%
CTTGATGTTGCTAAACAACA+TGG - chr5.2:26142457-26142476 MS.gene68300:intron 35.0%
GAAGAATCAAAGGAGACAAA+GGG - chr5.2:26142992-26143011 MS.gene68300:intron 35.0%
GAGAAAGAGTTCAACATTGT+TGG + chr5.2:26142326-26142345 None:intergenic 35.0%
GAGCAAGGAAAATTACCAAA+GGG - chr5.2:26143201-26143220 MS.gene68300:CDS 35.0%
GCTAAACAACATGGGATTTA+TGG - chr5.2:26142466-26142485 MS.gene68300:intron 35.0%
TAAAGAAACCATGCTTCCAA+AGG + chr5.2:26143103-26143122 None:intergenic 35.0%
TCAGTTGTGTATATCTCCTT+TGG - chr5.2:26143084-26143103 MS.gene68300:CDS 35.0%
TCATAGACAATGCAAGTGAT+TGG + chr5.2:26142418-26142437 None:intergenic 35.0%
TGAAAGTTACCCTGCTTATA+TGG - chr5.2:26142642-26142661 MS.gene68300:CDS 35.0%
TTAGAAGGAATGCTAGTGAA+TGG - chr5.2:26143532-26143551 MS.gene68300:CDS 35.0%
TTAGAGGAAATTTGGGAAGT+TGG - chr5.2:26143414-26143433 MS.gene68300:CDS 35.0%
TTGGACCAATCAATTTAGCA+GGG + chr5.2:26142948-26142967 None:intergenic 35.0%
! AAGGGTATGGAGCAAATTTA+TGG - chr5.2:26143010-26143029 MS.gene68300:intron 35.0%
! ACAAATAGAAGAGTTGGCTT+TGG - chr5.2:26143131-26143150 MS.gene68300:CDS 35.0%
! ACACCATTTTCATCCTCTTT+TGG + chr5.2:26143447-26143466 None:intergenic 35.0%
! TCCTCTAAAAACTTTGCATC+TGG + chr5.2:26143402-26143421 None:intergenic 35.0%
! TGCTAAATTGATTGGTCCAA+TGG - chr5.2:26142948-26142967 MS.gene68300:intron 35.0%
!! AGATCTCTAGAATTCAATGG+AGG + chr5.2:26142601-26142620 None:intergenic 35.0%
!! ATTGTTGGCTTGTGAAAAAC+CGG + chr5.2:26142311-26142330 None:intergenic 35.0%
!! ATTTGAAGCTTTAGAAGGAG+AGG - chr5.2:26142723-26142742 MS.gene68300:CDS 35.0%
!! CAAATAGAAGAGTTGGCTTT+GGG - chr5.2:26143132-26143151 MS.gene68300:CDS 35.0%
!! GGAAGATCTCTAGAATTCAA+TGG + chr5.2:26142604-26142623 None:intergenic 35.0%
!!! AATGAGGTTTGAGAGTGTTT+TGG + chr5.2:26142371-26142390 None:intergenic 35.0%
AAATTTGGGAAGTTGGAGTG+AGG - chr5.2:26143421-26143440 MS.gene68300:CDS 40.0%
AAGTAAGCAGAAGGAACCAT+TGG + chr5.2:26142967-26142986 None:intergenic 40.0%
ACACTTGAGAGTCTAAGTCT+TGG - chr5.2:26143336-26143355 MS.gene68300:CDS 40.0%
AGGCCAAAAGAGGATGAAAA+TGG - chr5.2:26143441-26143460 MS.gene68300:CDS 40.0%
ATCAAAGGAGACAAAGGGTA+TGG - chr5.2:26142997-26143016 MS.gene68300:intron 40.0%
CAATTGCCTTTGATTGTACC+TGG - chr5.2:26142571-26142590 MS.gene68300:CDS 40.0%
CTTCCATCTAAGTAAGCAGA+AGG + chr5.2:26142976-26142995 None:intergenic 40.0%
CTTTGCATCTGGCAATTGAT+CGG + chr5.2:26143391-26143410 None:intergenic 40.0%
GGAAGAATCAAAGGAGACAA+AGG - chr5.2:26142991-26143010 MS.gene68300:intron 40.0%
GTTCCTTCTGCTTACTTAGA+TGG - chr5.2:26142970-26142989 MS.gene68300:intron 40.0%
GTTGAGTTTGAAGGTTGTGA+TGG - chr5.2:26143488-26143507 MS.gene68300:CDS 40.0%
TGAATGGAAGAAGTTGGCTA+GGG - chr5.2:26143548-26143567 MS.gene68300:CDS 40.0%
TGCTAGTGAATGGAAGAAGT+TGG - chr5.2:26143542-26143561 MS.gene68300:CDS 40.0%
TGTTGTGTGTTTGCCACAAT+GGG - chr5.2:26143365-26143384 MS.gene68300:CDS 40.0%
TTATTGGCACATGATGCTGT+TGG - chr5.2:26143282-26143301 MS.gene68300:CDS 40.0%
! AGTTTGAAGGTTGTGATGGA+TGG - chr5.2:26143492-26143511 MS.gene68300:CDS 40.0%
! GGATGTTTTGTGACACATTG+TGG - chr5.2:26143303-26143322 MS.gene68300:CDS 40.0%
! GTATATCTCCTTTGGAAGCA+TGG - chr5.2:26143092-26143111 MS.gene68300:CDS 40.0%
! GTTTTGTGACACATTGTGGT+TGG - chr5.2:26143307-26143326 MS.gene68300:CDS 40.0%
!! ATTGGTTCGACAGAGATGTT+TGG + chr5.2:26142268-26142287 None:intergenic 40.0%
!! GCCAGATGCAAAGTTTTTAG+AGG - chr5.2:26143398-26143417 MS.gene68300:CDS 40.0%
!! GTAATGGGTTGTTGCAAATG+TGG + chr5.2:26142224-26142243 None:intergenic 40.0%
!!! GTTTTAAGAGACTCAGAGCA+AGG - chr5.2:26143186-26143205 MS.gene68300:CDS 40.0%
!!! TGAGAGTGTTTTGGAACCAT+TGG + chr5.2:26142362-26142381 None:intergenic 40.0%
CATTGTGGCAAACACACAAC+AGG + chr5.2:26143366-26143385 None:intergenic 45.0%
CTGTCGAACCAATCTCTGAT+GGG - chr5.2:26142275-26142294 MS.gene68300:CDS 45.0%
CTGTTGTGTGTTTGCCACAA+TGG - chr5.2:26143364-26143383 MS.gene68300:CDS 45.0%
GAATTCAATGGAGGAAGACC+AGG + chr5.2:26142592-26142611 None:intergenic 45.0%
GACTAATGTGTCCTTGTGCT+GGG + chr5.2:26142156-26142175 None:intergenic 45.0%
GGAAGACCAGGTACAATCAA+AGG + chr5.2:26142580-26142599 None:intergenic 45.0%
GTGAATGGAAGAAGTTGGCT+AGG - chr5.2:26143547-26143566 MS.gene68300:CDS 45.0%
TCTGTCGAACCAATCTCTGA+TGG - chr5.2:26142274-26142293 MS.gene68300:CDS 45.0%
TTAGCAACATCAAGTGCCCA+AGG + chr5.2:26142451-26142470 None:intergenic 45.0%
! TTCGACAGAGATGTTTGGTG+CGG + chr5.2:26142263-26142282 None:intergenic 45.0%
AGTTGGAGTGAGGCCAAAAG+AGG - chr5.2:26143431-26143450 MS.gene68300:CDS 50.0%
ATGTGTCCTTGTGCTGGGTA+TGG + chr5.2:26142151-26142170 None:intergenic 50.0%
GGACTAATGTGTCCTTGTGC+TGG + chr5.2:26142157-26142176 None:intergenic 50.0%
TCGTCGAACCCATCAGAGAT+TGG + chr5.2:26142286-26142305 None:intergenic 50.0%
TGTGTCCTTGTGCTGGGTAT+GGG + chr5.2:26142150-26142169 None:intergenic 50.0%
!! AGGGATGCTGTTTCTGAAGG+AGG - chr5.2:26143567-26143586 MS.gene68300:CDS 50.0%
!! GCTAGGGATGCTGTTTCTGA+AGG - chr5.2:26143564-26143583 MS.gene68300:CDS 50.0%
!! TCTGATGGGTTCGACGAATC+CGG - chr5.2:26142289-26142308 MS.gene68300:CDS 50.0%
GGCAATTGATCGGCCCATTG+TGG + chr5.2:26143381-26143400 None:intergenic 55.0%
GTGATCCCATACCCAGCACA+AGG - chr5.2:26142142-26142161 MS.gene68300:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 26142097 26143671 26142097 ID=MS.gene68300
chr5.2 mRNA 26142097 26143671 26142097 ID=MS.gene68300.t1;Parent=MS.gene68300
chr5.2 exon 26143024 26143671 26143024 ID=MS.gene68300.t1.exon1;Parent=MS.gene68300.t1
chr5.2 CDS 26143024 26143671 26143024 ID=cds.MS.gene68300.t1;Parent=MS.gene68300.t1
chr5.2 exon 26142519 26142849 26142519 ID=MS.gene68300.t1.exon2;Parent=MS.gene68300.t1
chr5.2 CDS 26142519 26142849 26142519 ID=cds.MS.gene68300.t1;Parent=MS.gene68300.t1
chr5.2 exon 26142097 26142365 26142097 ID=MS.gene68300.t1.exon3;Parent=MS.gene68300.t1
chr5.2 CDS 26142097 26142365 26142097 ID=cds.MS.gene68300.t1;Parent=MS.gene68300.t1
Gene Sequence

>MS.gene68300

ATGGTGGTACAGAGCCAAAACTACAACAACAATGTTCATGTGTTAGTGATCCCATACCCAGCACAAGGACACATTAGTCCACTAATCCAATTCTCAAAAAGATTAGTTTCAAAAGGCTTCAAAACCACATTTGCAACAACCCATTACACTGTAAAATCTATCACCGCACCAAACATCTCTGTCGAACCAATCTCTGATGGGTTCGACGAATCCGGTTTTTCACAAGCCAACAATGTTGAACTCTTTCTCACTTCATTCAAAACCAATGGTTCCAAAACACTCTCAAACCTCATTCAAAAACACCAAAAAACTTCAACACCAATCACTTGCATTGTCTATGATTCTTTTCTACCTTGGGCACTTGATGTTGCTAAACAACATGGGATTTATGGTGCTGCTTTTTTCACTAATTCAGCTGCTGTTTGTAACATTTTTTGTCGTATACATCATGGTTTGATTGAAACTCCAGTAGATCAATTGCCTTTGATTGTACCTGGTCTTCCTCCATTGAATTCTAGAGATCTTCCAAGTTTTATAAGATTTCCTGAAAGTTACCCTGCTTATATGGCTATGAAGTTAAATCAATTCTCAAATTTAAATCAAGCTGATTGGATGTTTGTCAATACATTTGAAGCTTTAGAAGGAGAGGTACAAATTCTTCGCATTTTATTATTCATTTTCCATTCATGAATAAAATATTTGATATTTGGTTGATGTATTTGGTCTCAAACCAAATACATTAATCTTTATCGACCAATCTTTCTCTTATGAATTTTAACGGACAATTAATTGATGATTAACAATTTTCTTTTTGTATTATAGGTTGTGAAAGGGCTAACTGAGATGTTCCCTGCTAAATTGATTGGTCCAATGGTTCCTTCTGCTTACTTAGATGGAAGAATCAAAGGAGACAAAGGGTATGGAGCAAATTTATGGAAGCCATTAAGTGAAGATTGTATTAATTGGTTAAATGCAAAGCCATCACAATCAGTTGTGTATATCTCCTTTGGAAGCATGGTTTCTTTAACATCAGAACAAATAGAAGAGTTGGCTTTGGGATTAAAAGAAAGTGAAGTGAATTTCTTATGGGTTTTAAGAGACTCAGAGCAAGGAAAATTACCAAAGGGATACAAAGATTTTATCAAAGAAAAGGGTATAATTGTAACATGGTGTAACCAACTTGAATTATTGGCACATGATGCTGTTGGATGTTTTGTGACACATTGTGGTTGGAATTCAACACTTGAGAGTCTAAGTCTTGGTGTTCCTGTTGTGTGTTTGCCACAATGGGCCGATCAATTGCCAGATGCAAAGTTTTTAGAGGAAATTTGGGAAGTTGGAGTGAGGCCAAAAGAGGATGAAAATGGTGTTGTGAAGAGAGAAGAATTTATGTTGAGTTTGAAGGTTGTGATGGATGGTGAAAGAAGTGAAGTGATTAGAAGGAATGCTAGTGAATGGAAGAAGTTGGCTAGGGATGCTGTTTCTGAAGGAGGTAGCTCTGATAAGAATATTGACGAGTTTGTGGATCATTTGACTAACACAAATAAGATGGGAAATGATTTGAGTGGTTATTAG
Protein sequence

>MS.gene68300.t1

MVVQSQNYNNNVHVLVIPYPAQGHISPLIQFSKRLVSKGFKTTFATTHYTVKSITAPNISVEPISDGFDESGFSQANNVELFLTSFKTNGSKTLSNLIQKHQKTSTPITCIVYDSFLPWALDVAKQHGIYGAAFFTNSAAVCNIFCRIHHGLIETPVDQLPLIVPGLPPLNSRDLPSFIRFPESYPAYMAMKLNQFSNLNQADWMFVNTFEALEGEVVKGLTEMFPAKLIGPMVPSAYLDGRIKGDKGYGANLWKPLSEDCINWLNAKPSQSVVYISFGSMVSLTSEQIEELALGLKESEVNFLWVLRDSEQGKLPKGYKDFIKEKDAKFLEEIWEVGVRPKEDENGVVKREEFMLSLKVVMDGERSEVIRRNASEWKKLARDAVSEGGSSDKNIDEFVDHLTNTNKMGNDLSGY