AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene027547

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027547.t1 MTR_5g035580 98.417 379 6 0 1 379 1 379 0.0 776
MS.gene027547.t1 MTR_5g035560 94.879 371 19 0 9 379 7 377 0.0 740
MS.gene027547.t1 MTR_6g038200 50.919 381 182 2 3 379 1 380 5.26e-142 411
MS.gene027547.t1 MTR_6g038230 51.181 381 181 2 3 379 1 380 2.10e-141 410
MS.gene027547.t1 MTR_6g038220 51.842 380 179 2 3 379 1 379 2.09e-138 402
MS.gene027547.t1 MTR_6g038240 49.596 371 182 2 13 379 11 380 4.01e-134 391
MS.gene027547.t1 MTR_7g080935 48.794 373 186 4 10 379 8 378 8.78e-126 370
MS.gene027547.t1 MTR_7g080940 47.721 373 190 4 10 379 8 378 1.17e-125 370
MS.gene027547.t1 MTR_8g088560 48.128 374 185 3 10 375 7 379 3.78e-125 369
MS.gene027547.t1 MTR_6g038300 46.900 371 193 1 13 379 11 381 1.58e-122 362
MS.gene027547.t1 MTR_7g080950 46.113 373 196 4 10 379 3 373 1.19e-120 357
MS.gene027547.t1 MTR_7g080900 45.187 374 197 6 11 379 10 380 9.23e-113 337
MS.gene027547.t1 MTR_8g083290 40.052 387 208 12 13 379 4 386 1.38e-85 267
MS.gene027547.t1 MTR_3g084520 39.043 397 211 12 11 379 4 397 9.23e-81 255
MS.gene027547.t1 MTR_1g107315 37.659 393 215 10 11 379 6 392 9.25e-79 250
MS.gene027547.t1 MTR_8g083280 37.563 394 203 12 13 379 7 384 3.04e-78 248
MS.gene027547.t1 MTR_1g107350 36.829 391 219 9 12 379 7 392 5.04e-78 248
MS.gene027547.t1 MTR_3g049970 37.310 394 213 11 12 379 8 393 7.28e-78 248
MS.gene027547.t1 MTR_1g032490 36.896 393 218 10 11 379 8 394 4.83e-76 243
MS.gene027547.t1 MTR_1g107380 36.061 391 223 8 12 379 12 398 1.10e-75 242
MS.gene027547.t1 MTR_3g084540 37.028 397 219 11 11 379 4 397 2.96e-74 238
MS.gene027547.t1 MTR_4g095008 36.041 394 215 12 11 379 9 390 1.26e-72 236
MS.gene027547.t1 MTR_8g064880 35.443 395 225 10 12 379 8 399 6.84e-71 230
MS.gene027547.t1 MTR_1g107375 34.987 383 226 7 11 379 6 379 1.01e-70 229
MS.gene027547.t1 MTR_3g084530 37.500 400 213 13 11 379 4 397 6.52e-70 227
MS.gene027547.t1 MTR_4g094920 36.250 400 214 12 7 379 20 405 8.72e-70 228
MS.gene027547.t1 MTR_1g107285 34.359 390 232 8 8 379 3 386 1.70e-69 226
MS.gene027547.t1 MTR_1g107365 33.773 379 235 6 12 379 44 417 5.71e-69 225
MS.gene027547.t1 MTR_7g080960 33.654 416 217 9 11 379 10 413 9.69e-69 224
MS.gene027547.t1 MTR_1g107360 34.987 383 229 8 12 379 8 385 7.59e-68 221
MS.gene027547.t1 MTR_8g064870 34.264 394 227 9 12 379 10 397 3.29e-67 220
MS.gene027547.t1 MTR_0036s0220 33.915 401 218 10 13 375 12 403 2.66e-65 215
MS.gene027547.t1 MTR_5g016480 34.184 392 224 12 12 375 7 392 6.13e-64 211
MS.gene027547.t1 MTR_5g464810 34.074 405 218 12 10 375 9 403 9.23e-63 208
MS.gene027547.t1 MTR_5g064240 34.074 405 218 12 10 375 9 403 9.23e-63 208
MS.gene027547.t1 MTR_3g479520 32.494 397 231 10 13 375 15 408 4.10e-62 207
MS.gene027547.t1 MTR_5g464760 31.450 407 228 11 10 375 9 405 8.36e-61 203
MS.gene027547.t1 MTR_3g008010 32.029 409 233 10 9 379 6 407 8.43e-61 203
MS.gene027547.t1 MTR_3g479490 30.864 405 235 9 9 375 2 399 1.74e-60 202
MS.gene027547.t1 MTR_3g079480 31.671 401 229 10 13 375 21 414 2.38e-58 197
MS.gene027547.t1 MTR_2g008210 32.000 400 228 13 13 376 11 402 4.55e-58 196
MS.gene027547.t1 MTR_6g013440 31.785 409 228 11 9 375 7 406 8.49e-58 196
MS.gene027547.t1 MTR_6g014290 30.073 409 241 9 9 379 6 407 2.42e-56 192
MS.gene027547.t1 MTR_6g014250 30.521 403 239 9 9 375 6 403 5.79e-56 191
MS.gene027547.t1 MTR_6g014220 29.803 406 238 9 9 375 6 403 8.02e-56 190
MS.gene027547.t1 MTR_6g014040 30.788 406 229 12 13 375 10 406 1.33e-55 190
MS.gene027547.t1 MTR_7g011470 32.134 389 231 12 13 375 10 391 4.48e-55 188
MS.gene027547.t1 MTR_7g013180 32.905 389 220 11 11 376 3 373 5.17e-55 187
MS.gene027547.t1 MTR_7g011470 31.429 385 235 9 13 375 10 387 1.29e-54 187
MS.gene027547.t1 MTR_3g479470 31.785 409 241 13 1 375 1 405 1.86e-54 187
MS.gene027547.t1 MTR_4g094220 29.975 407 232 9 13 375 7 404 5.76e-53 182
MS.gene027547.t1 MTR_6g014270 30.392 408 229 13 13 375 7 404 1.95e-52 181
MS.gene027547.t1 MTR_5g072810 30.402 398 226 12 5 379 4 373 2.03e-52 181
MS.gene027547.t1 MTR_0288s0020 29.208 404 226 10 9 375 6 386 2.27e-52 181
MS.gene027547.t1 MTR_6g014310 30.147 408 228 12 13 375 11 406 2.43e-52 181
MS.gene027547.t1 MTR_6g013960 29.310 406 240 11 13 378 10 408 3.09e-52 181
MS.gene027547.t1 MTR_5g072830 30.457 394 220 13 9 379 6 368 3.68e-52 180
MS.gene027547.t1 MTR_8g059425 29.032 403 237 10 13 375 10 403 4.60e-52 180
MS.gene027547.t1 MTR_6g014200 31.281 406 226 13 13 375 7 402 5.35e-52 180
MS.gene027547.t1 MTR_5g072820 30.513 390 217 12 13 379 10 368 3.50e-51 177
MS.gene027547.t1 MTR_5g072840 29.504 383 238 9 9 379 6 368 4.18e-51 177
MS.gene027547.t1 MTR_6g014150 31.773 406 224 14 13 375 7 402 4.47e-51 178
MS.gene027547.t1 MTR_4g064987 34.527 391 215 15 13 379 8 381 1.25e-50 176
MS.gene027547.t1 MTR_4g064987 33.854 384 221 13 13 379 8 375 1.53e-50 176
MS.gene027547.t1 MTR_7g013260 32.632 380 221 13 13 376 6 366 1.58e-50 175
MS.gene027547.t1 MTR_6g011340 29.803 406 240 12 13 379 10 409 1.66e-50 176
MS.gene027547.t1 MTR_6g014187 29.777 403 236 15 13 375 10 405 2.78e-50 176
MS.gene027547.t1 MTR_6g013450 30.273 403 235 14 13 375 10 406 2.14e-49 173
MS.gene027547.t1 MTR_6g013990 29.500 400 239 13 13 375 10 403 2.19e-49 173
MS.gene027547.t1 MTR_3g069690 33.073 384 227 9 13 379 8 378 2.91e-49 172
MS.gene027547.t1 MTR_7g013240 32.808 381 218 13 13 376 6 365 3.42e-49 172
MS.gene027547.t1 MTR_6g013900 30.500 400 236 13 13 375 10 404 3.72e-49 172
MS.gene027547.t1 MTR_5g031840 33.166 398 217 17 13 375 5 388 1.35e-48 171
MS.gene027547.t1 MTR_6g014050 29.630 405 234 11 13 375 11 406 2.45e-48 171
MS.gene027547.t1 MTR_7g013200 32.812 384 215 14 13 376 5 365 2.54e-48 169
MS.gene027547.t1 MTR_7g055710 30.562 409 236 14 3 376 1 396 6.02e-48 170
MS.gene027547.t1 MTR_6g014020 29.238 407 233 12 13 375 10 405 7.92e-48 169
MS.gene027547.t1 MTR_6g014170 30.203 394 236 12 9 375 6 387 9.47e-48 169
MS.gene027547.t1 MTR_6g013920 30.617 405 237 14 13 379 10 408 9.82e-48 169
MS.gene027547.t1 MTR_5g087620 31.325 415 227 15 13 379 10 414 1.15e-47 169
MS.gene027547.t1 MTR_7g070660 31.852 405 231 14 3 376 1 391 2.98e-47 168
MS.gene027547.t1 MTR_7g070610 30.296 406 245 10 1 376 1 398 3.11e-47 168
MS.gene027547.t1 MTR_7g013220 32.152 395 214 12 13 376 5 376 3.77e-47 167
MS.gene027547.t1 MTR_4g485630 30.882 408 230 16 7 379 3 393 3.52e-46 164
MS.gene027547.t1 MTR_5g031860 32.995 394 224 13 13 375 12 396 6.75e-46 164
MS.gene027547.t1 MTR_7g047030 30.637 408 220 13 13 379 6 391 1.74e-45 162
MS.gene027547.t1 MTR_7g047270 30.637 408 220 13 13 379 6 391 1.74e-45 162
MS.gene027547.t1 MTR_5g031830 32.152 395 227 13 13 375 12 397 4.74e-45 161
MS.gene027547.t1 MTR_0891s0010 38.889 216 124 4 167 375 1 215 1.77e-44 155
MS.gene027547.t1 MTR_6g014300 28.780 410 227 11 7 375 6 391 1.98e-44 160
MS.gene027547.t1 MTR_5g072860 31.026 390 218 13 13 375 18 383 1.35e-43 157
MS.gene027547.t1 MTR_3g069710 29.847 392 246 9 4 379 3 381 1.47e-43 157
MS.gene027547.t1 MTR_0184s0040 30.488 410 220 12 12 379 20 406 1.67e-43 157
MS.gene027547.t1 MTR_0078s0190 30.488 410 220 12 12 379 20 406 1.67e-43 157
MS.gene027547.t1 MTR_5g058320 29.471 397 230 14 13 375 10 390 1.95e-43 157
MS.gene027547.t1 MTR_0078s0010 30.542 406 223 12 13 379 6 391 3.13e-43 156
MS.gene027547.t1 MTR_3g031400 30.914 372 226 11 13 375 18 367 4.81e-43 156
MS.gene027547.t1 MTR_8g012745 29.877 405 231 11 13 379 6 395 5.70e-43 156
MS.gene027547.t1 MTR_8g077590 30.807 409 216 15 13 379 9 392 1.22e-42 155
MS.gene027547.t1 MTR_8g009050 30.751 413 216 18 12 379 5 392 1.93e-42 154
MS.gene027547.t1 MTR_5g098960 29.396 381 240 10 14 376 8 377 2.12e-42 154
MS.gene027547.t1 MTR_6g014240 29.851 402 209 17 12 375 6 372 2.62e-42 154
MS.gene027547.t1 MTR_6g033625 34.237 295 171 9 94 375 102 386 2.76e-42 154
MS.gene027547.t1 MTR_8g066610 29.723 397 244 15 9 376 5 395 3.75e-42 154
MS.gene027547.t1 MTR_7g070740 28.537 410 243 14 3 376 1 396 3.91e-42 154
MS.gene027547.t1 MTR_7g070930 29.902 408 239 15 4 376 5 400 4.74e-42 154
MS.gene027547.t1 MTR_3g031450 31.200 375 223 12 13 375 18 369 5.89e-42 153
MS.gene027547.t1 MTR_5g090660 28.784 403 236 11 13 379 5 392 5.99e-42 154
MS.gene027547.t1 MTR_5g090700 27.737 411 234 12 13 379 5 396 7.16e-42 153
MS.gene027547.t1 MTR_7g071040 29.383 405 249 13 2 376 6 403 1.32e-41 153
MS.gene027547.t1 MTR_6g033675 35.094 265 131 11 134 375 140 386 1.95e-41 152
MS.gene027547.t1 MTR_6g033615 35.216 301 147 11 96 375 99 372 2.19e-41 151
MS.gene027547.t1 MTR_5g090630 29.557 406 222 12 13 379 5 385 2.38e-41 151
MS.gene027547.t1 MTR_0184s0030 29.250 400 232 13 12 375 5 389 2.95e-41 151
MS.gene027547.t1 MTR_0078s0060 28.571 420 214 13 12 379 5 390 4.99e-41 150
MS.gene027547.t1 MTR_5g090620 28.780 410 230 12 13 379 5 395 5.33e-41 150
MS.gene027547.t1 MTR_4g108250 29.927 411 240 15 3 376 1 400 5.75e-41 151
MS.gene027547.t1 MTR_5g045970 29.602 402 236 17 10 376 13 402 6.15e-41 151
MS.gene027547.t1 MTR_8g009055 30.993 413 215 16 12 379 5 392 6.74e-41 150
MS.gene027547.t1 MTR_7g070800 31.034 406 221 19 10 376 3 388 7.46e-41 150
MS.gene027547.t1 MTR_5g075440 30.928 388 219 14 13 375 10 373 8.02e-41 150
MS.gene027547.t1 MTR_5g098930 27.751 418 218 12 12 379 4 387 1.55e-40 149
MS.gene027547.t1 MTR_3g479610 34.894 235 141 5 148 375 9 238 2.39e-40 145
MS.gene027547.t1 MTR_0009s0240 29.574 399 238 13 9 379 3 386 2.58e-40 149
MS.gene027547.t1 MTR_4g128690 29.124 388 237 9 7 375 9 377 4.79e-40 147
MS.gene027547.t1 MTR_8g012635 28.922 408 239 11 10 379 3 397 5.31e-40 148
MS.gene027547.t1 MTR_6g033660 33.775 302 158 12 96 375 104 385 6.03e-40 148
MS.gene027547.t1 MTR_7g117405 29.397 398 242 12 7 376 6 392 7.70e-40 147
MS.gene027547.t1 MTR_8g465670 28.467 411 222 14 14 379 8 391 9.79e-40 147
MS.gene027547.t1 MTR_1g029540 28.818 406 218 14 7 375 8 379 1.37e-39 146
MS.gene027547.t1 MTR_8g009063 28.333 420 231 13 1 375 1 395 2.84e-39 146
MS.gene027547.t1 MTR_7g070860 31.068 412 209 19 3 376 1 375 3.03e-39 146
MS.gene027547.t1 MTR_5g090580 28.148 405 238 10 13 379 5 394 3.46e-39 145
MS.gene027547.t1 MTR_6g033725 34.007 297 165 11 96 375 101 383 3.58e-39 145
MS.gene027547.t1 MTR_5g090670 27.518 407 240 11 13 379 5 396 1.18e-38 144
MS.gene027547.t1 MTR_5g016660 29.676 401 228 13 15 376 12 397 2.15e-38 144
MS.gene027547.t1 MTR_8g008990 28.883 412 227 14 12 379 5 394 2.73e-38 143
MS.gene027547.t1 MTR_7g102450 28.321 399 246 14 1 376 1 382 5.72e-38 142
MS.gene027547.t1 MTR_7g117170 29.657 408 215 15 14 375 16 397 6.49e-38 142
MS.gene027547.t1 MTR_5g004940 52.846 123 52 2 259 375 194 316 7.07e-38 140
MS.gene027547.t1 MTR_5g004940 27.778 180 110 4 13 176 17 192 1.03e-15 78.6
MS.gene027547.t1 MTR_8g006220 27.962 422 218 15 14 379 7 398 1.01e-37 142
MS.gene027547.t1 MTR_8g071070 29.056 413 232 16 9 379 3 396 1.02e-37 142
MS.gene027547.t1 MTR_3g009510 28.467 411 226 12 14 375 6 397 1.12e-37 142
MS.gene027547.t1 MTR_7g071050 29.902 408 198 17 1 376 1 352 1.59e-37 140
MS.gene027547.t1 MTR_8g009073 28.019 414 228 13 10 379 3 390 3.08e-37 140
MS.gene027547.t1 MTR_6g005600 28.333 420 216 15 13 379 6 393 4.02e-37 140
MS.gene027547.t1 MTR_8g006270 32.803 314 173 9 91 379 89 389 5.64e-37 139
MS.gene027547.t1 MTR_4g008630 26.895 409 225 13 7 375 8 382 8.17e-37 139
MS.gene027547.t1 MTR_8g012650 31.475 305 167 8 104 379 106 397 1.56e-36 138
MS.gene027547.t1 MTR_7g070810 29.808 416 222 18 1 376 1 386 1.71e-36 138
MS.gene027547.t1 MTR_7g070780 29.327 416 232 14 3 376 1 396 1.87e-36 139
MS.gene027547.t1 MTR_8g006260 29.676 401 237 12 13 379 6 395 4.16e-36 137
MS.gene027547.t1 MTR_1g019510 28.856 402 235 13 12 379 5 389 5.11e-36 137
MS.gene027547.t1 MTR_5g090600 28.460 383 236 10 13 375 5 369 6.11e-36 136
MS.gene027547.t1 MTR_8g074550 27.955 440 207 18 13 379 8 410 1.09e-35 137
MS.gene027547.t1 MTR_8g027885 27.913 412 211 14 14 375 19 394 1.11e-35 136
MS.gene027547.t1 MTR_6g014186 28.142 366 210 12 13 335 7 362 1.16e-35 135
MS.gene027547.t1 MTR_5g045960 25.622 402 251 13 11 376 7 396 1.24e-35 136
MS.gene027547.t1 MTR_4g485590 29.870 385 221 16 13 376 9 365 1.24e-35 135
MS.gene027547.t1 MTR_6g023665 26.619 417 221 13 14 379 14 396 1.80e-35 135
MS.gene027547.t1 MTR_1g062380 27.708 397 251 14 10 376 13 403 2.17e-35 135
MS.gene027547.t1 MTR_5g070090 28.856 402 229 14 7 375 5 382 2.75e-35 135
MS.gene027547.t1 MTR_8g009067 28.851 409 227 13 12 379 5 390 4.35e-35 134
MS.gene027547.t1 MTR_7g046490 27.139 409 223 11 13 375 6 385 4.48e-35 134
MS.gene027547.t1 MTR_7g070940 28.606 409 235 15 1 376 1 385 5.69e-35 134
MS.gene027547.t1 MTR_5g070040 28.000 400 230 13 13 375 11 389 6.92e-35 134
MS.gene027547.t1 MTR_0536s0020 28.499 393 232 13 14 376 19 392 8.53e-35 134
MS.gene027547.t1 MTR_4g128720 27.532 385 248 9 12 379 14 384 8.87e-35 133
MS.gene027547.t1 MTR_7g070910 27.518 407 252 14 3 376 1 397 9.30e-35 134
MS.gene027547.t1 MTR_2g046750 27.139 409 233 13 13 379 5 390 1.34e-34 133
MS.gene027547.t1 MTR_6g014190 34.450 209 128 5 173 375 7 212 1.36e-34 129
MS.gene027547.t1 MTR_2g098430 28.288 403 234 14 14 376 7 394 1.53e-34 133
MS.gene027547.t1 MTR_5g040030 28.117 409 253 15 1 376 1 401 1.74e-34 133
MS.gene027547.t1 MTR_4g024020 28.606 409 231 17 12 376 8 399 2.55e-34 132
MS.gene027547.t1 MTR_7g470610 33.577 274 145 11 117 376 3 253 4.90e-34 128
MS.gene027547.t1 MTR_7g070583 33.577 274 145 11 117 376 3 253 4.90e-34 128
MS.gene027547.t1 MTR_8g008970 26.980 404 241 12 12 379 5 390 6.86e-34 133
MS.gene027547.t1 MTR_8g008970 35.079 191 101 5 193 375 535 710 1.09e-24 106
MS.gene027547.t1 MTR_5g072850 29.539 369 194 13 13 375 10 318 7.62e-34 129
MS.gene027547.t1 MTR_4g117960 28.753 393 233 15 17 376 15 393 1.32e-33 130
MS.gene027547.t1 MTR_7g070870 27.407 405 225 14 12 376 18 393 2.07e-33 130
MS.gene027547.t1 MTR_7g102490 29.136 405 234 16 12 376 8 399 2.67e-33 130
MS.gene027547.t1 MTR_8g043470 28.179 291 145 5 108 375 54 303 2.90e-33 128
MS.gene027547.t1 MTR_4g117980 29.032 403 220 15 17 376 15 394 3.19e-33 129
MS.gene027547.t1 MTR_7g102460 28.642 405 234 18 12 376 8 397 4.38e-33 129
MS.gene027547.t1 MTR_8g027870 28.571 406 216 14 14 375 19 394 5.59e-33 129
MS.gene027547.t1 MTR_4g117890 28.753 393 231 13 14 376 14 387 6.53e-33 129
MS.gene027547.t1 MTR_7g102550 28.256 407 236 17 10 376 6 396 8.91e-33 128
MS.gene027547.t1 MTR_6g488280 25.943 424 223 14 10 379 3 389 1.23e-32 127
MS.gene027547.t1 MTR_0428s0010 25.943 424 223 14 10 379 3 389 1.23e-32 127
MS.gene027547.t1 MTR_8g090095 25.935 401 223 12 18 375 30 399 2.94e-32 127
MS.gene027547.t1 MTR_8g006730 26.961 408 243 12 9 379 2 391 3.10e-32 126
MS.gene027547.t1 MTR_2g008225 27.889 398 250 12 2 375 4 388 3.89e-32 126
MS.gene027547.t1 MTR_4g082810 29.032 403 227 13 12 375 6 388 4.20e-32 125
MS.gene027547.t1 MTR_8g009067 31.119 286 155 9 120 379 3 272 6.15e-32 124
MS.gene027547.t1 MTR_4g117950 28.788 396 216 16 17 376 10 375 8.03e-32 125
MS.gene027547.t1 MTR_2g040530 26.471 408 236 11 13 379 5 389 1.64e-31 124
MS.gene027547.t1 MTR_0477s0010 28.674 279 142 6 117 375 1 242 1.71e-31 122
MS.gene027547.t1 MTR_5g090610 26.185 401 237 11 13 379 5 380 2.12e-31 124
MS.gene027547.t1 MTR_8g006710 26.355 406 237 13 14 379 7 390 2.13e-31 124
MS.gene027547.t1 MTR_8g009073 32.780 241 124 8 161 379 37 261 2.36e-31 122
MS.gene027547.t1 MTR_2g034990 26.854 391 244 11 17 376 15 394 2.37e-31 124
MS.gene027547.t1 MTR_4g485620 29.443 377 232 15 27 376 3 372 2.44e-31 124
MS.gene027547.t1 MTR_4g082820 29.167 408 226 13 12 379 6 390 2.60e-31 124
MS.gene027547.t1 MTR_6g035295 27.654 405 237 13 11 376 10 397 2.61e-31 124
MS.gene027547.t1 MTR_2g008220 27.089 395 255 11 3 375 4 387 4.11e-31 123
MS.gene027547.t1 MTR_2g059240 26.942 412 252 13 1 379 1 396 4.22e-31 123
MS.gene027547.t1 MTR_7g102560 27.387 398 245 16 12 376 8 394 7.13e-31 123
MS.gene027547.t1 MTR_8g044140 31.338 284 169 11 111 376 87 362 7.82e-31 122
MS.gene027547.t1 MTR_4g485640 30.000 380 222 13 23 376 219 580 8.60e-31 124
MS.gene027547.t1 MTR_6g014160 29.618 314 166 12 85 375 76 357 1.19e-30 121
MS.gene027547.t1 MTR_6g042310 27.525 396 252 13 2 375 4 386 1.65e-30 122
MS.gene027547.t1 MTR_5g027210 25.647 425 240 15 14 379 5 412 1.98e-30 122
MS.gene027547.t1 MTR_7g102520 27.431 401 248 14 10 376 9 400 2.11e-30 122
MS.gene027547.t1 MTR_6g035185 26.943 386 240 12 17 370 15 390 3.24e-30 121
MS.gene027547.t1 MTR_6g013680 29.042 334 186 12 58 366 12 319 5.25e-30 119
MS.gene027547.t1 MTR_4g031800 28.861 395 228 17 14 375 10 384 5.62e-30 120
MS.gene027547.t1 MTR_5g019580 26.353 425 234 13 9 379 3 402 1.06e-29 119
MS.gene027547.t1 MTR_5g039900 24.819 415 255 13 1 376 1 397 1.10e-29 119
MS.gene027547.t1 MTR_6g036650 28.463 397 231 16 12 375 17 393 2.34e-29 118
MS.gene027547.t1 MTR_5g067170 25.907 386 256 9 17 378 15 394 2.80e-29 118
MS.gene027547.t1 MTR_6g035265 27.110 391 224 15 17 370 15 381 2.83e-29 118
MS.gene027547.t1 MTR_2g046820 27.427 412 225 12 13 379 5 387 5.38e-29 117
MS.gene027547.t1 MTR_4g123553 27.411 394 249 12 5 375 4 383 1.01e-28 116
MS.gene027547.t1 MTR_0536s0010 28.846 416 217 20 3 376 11 389 1.08e-28 117
MS.gene027547.t1 MTR_8g466240 29.219 397 229 16 13 379 8 382 1.18e-28 116
MS.gene027547.t1 MTR_1g040310 26.515 396 248 14 12 376 14 397 3.12e-28 115
MS.gene027547.t1 MTR_7g067120 27.394 376 229 13 13 375 9 353 3.27e-28 115
MS.gene027547.t1 MTR_2g046620 26.718 393 257 12 2 375 4 384 4.96e-28 114
MS.gene027547.t1 MTR_7g067330 25.936 374 233 10 10 370 6 348 6.14e-28 114
MS.gene027547.t1 MTR_4g118000 27.110 391 227 15 17 376 16 379 8.67e-28 114
MS.gene027547.t1 MTR_7g012120 28.462 390 236 15 17 376 20 396 9.89e-28 114
MS.gene027547.t1 MTR_8g007585 42.308 130 70 2 250 375 189 317 1.03e-27 113
MS.gene027547.t1 MTR_8g007585 26.623 154 98 4 9 149 6 157 5.50e-11 63.9
MS.gene027547.t1 MTR_5g019580 26.128 421 212 14 9 379 55 426 1.94e-27 113
MS.gene027547.t1 MTR_2g008226 28.250 400 241 15 9 375 6 392 4.38e-27 112
MS.gene027547.t1 MTR_8g012630 41.727 139 61 2 261 379 203 341 4.71e-27 111
MS.gene027547.t1 MTR_4g077960 27.415 383 224 14 23 375 2 360 5.09e-27 111
MS.gene027547.t1 MTR_8g012730 32.365 241 101 7 165 379 30 234 5.13e-27 109
MS.gene027547.t1 MTR_5g090690 26.923 312 163 9 73 360 35 305 5.45e-27 110
MS.gene027547.t1 MTR_8g068340 26.000 400 252 13 6 375 5 390 7.88e-27 111
MS.gene027547.t1 MTR_6g078320 23.902 410 247 12 13 375 11 402 1.34e-26 110
MS.gene027547.t1 MTR_2g035020 26.368 402 242 11 12 376 10 394 3.16e-26 110
MS.gene027547.t1 MTR_5g029800 26.684 386 247 13 17 376 15 390 4.63e-26 109
MS.gene027547.t1 MTR_8g032950 26.368 402 236 17 14 376 13 393 6.82e-26 108
MS.gene027547.t1 MTR_1g090270 24.574 411 234 13 7 376 9 384 1.46e-25 107
MS.gene027547.t1 MTR_1g019520 40.146 137 65 3 260 379 2 138 2.72e-25 102
MS.gene027547.t1 MTR_2g035040 28.070 285 178 8 110 376 24 299 2.77e-25 106
MS.gene027547.t1 MTR_8g068360 24.685 397 260 13 6 375 5 389 1.99e-24 104
MS.gene027547.t1 MTR_2g014900 25.381 394 252 10 10 379 4 379 9.92e-24 102
MS.gene027547.t1 MTR_1g107340 28.980 245 156 5 8 236 3 245 1.10e-23 99.4
MS.gene027547.t1 MTR_2086s0010 43.299 97 50 1 284 375 1 97 4.34e-23 95.5
MS.gene027547.t1 MTR_1996s0010 43.299 97 50 1 284 375 1 97 4.34e-23 95.5
MS.gene027547.t1 MTR_7g070760 36.842 171 85 4 208 376 36 185 1.31e-22 95.1
MS.gene027547.t1 MTR_8g068330 24.250 400 247 15 12 375 7 386 1.52e-22 99.0
MS.gene027547.t1 MTR_0078s0200 26.899 316 197 10 12 308 5 305 5.60e-22 95.5
MS.gene027547.t1 MTR_8g007565 24.500 400 253 13 10 375 4 388 1.73e-21 95.9
MS.gene027547.t1 MTR_3g435310 41.739 115 64 2 264 375 228 342 2.43e-21 95.1
MS.gene027547.t1 MTR_8g007650 24.500 400 253 13 10 375 4 388 4.22e-21 94.7
MS.gene027547.t1 MTR_8g056740 29.699 266 141 8 110 370 55 279 1.18e-20 93.2
MS.gene027547.t1 MTR_4g079250 26.000 400 240 13 12 379 7 382 1.48e-20 93.2
MS.gene027547.t1 MTR_4g079270 25.000 392 254 11 12 379 7 382 4.18e-20 92.0
MS.gene027547.t1 MTR_6g014185 33.171 205 94 9 184 375 95 269 9.52e-20 90.1
MS.gene027547.t1 MTR_5g066410 22.879 389 246 12 16 375 1 364 8.82e-19 87.8
MS.gene027547.t1 MTR_4g059370 31.053 190 105 5 198 376 137 311 1.32e-18 87.0
MS.gene027547.t1 MTR_8g083300 36.496 137 78 4 14 143 8 142 2.24e-18 82.0
MS.gene027547.t1 MTR_7g039550 29.885 174 116 2 209 376 2 175 2.64e-18 84.3
MS.gene027547.t1 MTR_8g009840 35.000 140 68 3 259 375 310 449 5.47e-18 85.9
MS.gene027547.t1 MTR_8g006230 31.064 235 139 8 102 328 46 265 6.17e-18 83.6
MS.gene027547.t1 MTR_6g013435 33.136 169 105 5 150 316 51 213 1.16e-17 83.2
MS.gene027547.t1 MTR_2g083490 25.871 402 241 14 10 379 5 381 1.47e-17 84.3
MS.gene027547.t1 MTR_5g090650 24.370 357 198 11 12 337 4 319 1.86e-17 82.8
MS.gene027547.t1 MTR_2g083380 25.255 392 239 12 10 371 22 389 1.84e-16 80.9
MS.gene027547.t1 MTR_3g009490 38.318 107 47 3 288 375 3 109 4.43e-16 76.3
MS.gene027547.t1 MTR_3g479620 31.429 140 84 2 13 140 6 145 7.46e-16 75.1
MS.gene027547.t1 MTR_2g083430 26.509 381 244 12 12 371 7 372 7.71e-15 75.9
MS.gene027547.t1 MTR_0199s0010 23.265 245 150 6 9 221 6 244 1.85e-13 70.5
MS.gene027547.t1 MTR_6g052375 30.348 201 108 8 148 337 15 194 2.25e-13 70.9
MS.gene027547.t1 MTR_0536s0030 43.056 72 38 2 308 376 193 264 3.98e-13 70.5
MS.gene027547.t1 MTR_6g014000 47.273 55 29 0 321 375 27 81 6.36e-13 70.1
MS.gene027547.t1 MTR_1g107325 51.786 56 27 0 324 379 221 276 9.43e-13 69.3
MS.gene027547.t1 MTR_2g083480 39.669 121 67 2 257 371 252 372 1.01e-12 69.7
MS.gene027547.t1 MTR_5g066390 40.260 77 42 1 303 375 64 140 1.25e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027547.t1 AT1G24100 51.194 377 170 5 13 379 11 383 2.71e-139 404
MS.gene027547.t1 AT2G43820 48.649 370 174 6 13 375 7 367 5.98e-124 365
MS.gene027547.t1 AT2G43840 48.656 372 171 8 13 375 7 367 2.26e-119 353
MS.gene027547.t1 AT2G43840 48.387 372 172 8 13 375 7 367 2.87e-118 350
MS.gene027547.t1 AT1G05675 43.455 382 192 4 13 379 6 378 2.14e-105 318
MS.gene027547.t1 AT1G05680 43.122 378 199 4 13 379 6 378 6.35e-104 314
MS.gene027547.t1 AT2G31750 43.501 377 197 5 13 379 8 378 1.20e-102 311
MS.gene027547.t1 AT2G31750 43.501 377 197 5 13 379 8 378 3.37e-102 311
MS.gene027547.t1 AT2G31790 42.175 377 206 6 13 379 8 382 8.94e-99 301
MS.gene027547.t1 AT4G15480 34.243 403 234 8 1 379 7 402 8.73e-81 256
MS.gene027547.t1 AT4G15490 34.500 400 220 9 9 379 4 390 1.56e-79 252
MS.gene027547.t1 AT3G21560 33.592 387 235 6 13 379 12 396 2.17e-76 244
MS.gene027547.t1 AT4G15500 35.248 383 227 8 13 379 9 386 2.05e-75 241
MS.gene027547.t1 AT1G05560 35.128 390 214 9 13 379 5 378 2.79e-70 228
MS.gene027547.t1 AT1G05530 35.443 395 209 11 13 379 5 381 3.21e-70 227
MS.gene027547.t1 AT1G05560 35.128 390 214 9 13 379 55 428 7.58e-70 228
MS.gene027547.t1 AT1G22380 34.171 398 222 12 13 375 13 405 4.53e-65 215
MS.gene027547.t1 AT2G28080 30.670 388 234 7 17 378 22 400 1.85e-64 213
MS.gene027547.t1 AT4G15550 31.421 401 224 10 13 379 13 396 4.10e-63 209
MS.gene027547.t1 AT4G14090 32.741 394 236 11 1 379 1 380 5.08e-63 209
MS.gene027547.t1 AT1G22400 32.152 395 235 8 13 375 13 406 5.04e-62 207
MS.gene027547.t1 AT1G22370 32.992 391 231 10 13 375 13 400 2.30e-61 205
MS.gene027547.t1 AT2G23260 34.218 377 230 11 13 379 10 378 1.14e-60 202
MS.gene027547.t1 AT2G23250 33.607 366 223 12 22 379 7 360 2.96e-60 201
MS.gene027547.t1 AT1G78270 31.920 401 229 11 13 376 13 406 6.26e-60 201
MS.gene027547.t1 AT1G22360 31.218 394 239 8 13 375 10 402 1.05e-59 200
MS.gene027547.t1 AT1G22360 31.218 394 239 8 13 375 10 402 1.26e-59 200
MS.gene027547.t1 AT1G22340 29.873 395 244 8 13 375 13 406 6.90e-59 199
MS.gene027547.t1 AT2G36970 30.151 398 232 10 13 376 10 395 1.09e-58 198
MS.gene027547.t1 AT3G02100 32.391 389 221 12 13 376 13 384 1.45e-51 179
MS.gene027547.t1 AT5G17050 30.457 394 227 10 9 375 8 381 3.95e-50 175
MS.gene027547.t1 AT2G30140 32.653 392 215 13 9 379 9 372 1.51e-48 170
MS.gene027547.t1 AT2G15480 30.488 410 235 15 5 376 2 399 2.75e-48 171
MS.gene027547.t1 AT2G15480 30.488 410 235 15 5 376 2 399 2.85e-48 170
MS.gene027547.t1 AT2G30140 32.570 393 215 13 9 379 9 373 3.07e-48 169
MS.gene027547.t1 AT2G15490 30.562 409 222 13 12 376 6 396 4.03e-47 167
MS.gene027547.t1 AT1G01420 31.373 408 229 12 3 375 1 392 2.01e-46 165
MS.gene027547.t1 AT1G01420 31.671 401 223 12 10 375 5 389 3.50e-46 165
MS.gene027547.t1 AT3G46670 32.216 388 224 12 13 379 9 378 3.57e-46 164
MS.gene027547.t1 AT2G30150 30.287 383 230 12 13 379 13 374 4.58e-46 164
MS.gene027547.t1 AT2G15490 29.854 412 224 12 12 376 6 399 4.63e-46 164
MS.gene027547.t1 AT2G30150 30.079 379 228 12 17 379 1 358 1.89e-44 159
MS.gene027547.t1 AT1G30530 30.526 380 235 11 10 374 9 374 2.08e-44 159
MS.gene027547.t1 AT4G01070 30.073 409 213 12 13 375 8 389 2.39e-44 160
MS.gene027547.t1 AT5G05870 31.980 394 232 11 9 379 4 384 4.43e-44 159
MS.gene027547.t1 AT5G17040 29.843 382 239 9 11 379 3 368 7.01e-44 157
MS.gene027547.t1 AT3G46660 31.043 393 222 12 14 379 15 385 1.60e-43 157
MS.gene027547.t1 AT5G59590 30.000 400 223 14 10 379 7 379 1.70e-43 157
MS.gene027547.t1 AT2G36760 28.571 399 240 11 12 376 13 400 3.33e-43 157
MS.gene027547.t1 AT4G34135 27.340 406 251 13 5 376 3 398 7.92e-43 155
MS.gene027547.t1 AT1G01390 29.750 400 232 10 10 375 5 389 8.89e-43 155
MS.gene027547.t1 AT1G01390 29.750 400 232 10 10 375 22 406 9.02e-43 156
MS.gene027547.t1 AT5G59580 30.769 390 226 14 13 379 9 377 1.15e-42 155
MS.gene027547.t1 AT3G46650 29.381 388 218 9 13 379 10 362 1.29e-42 154
MS.gene027547.t1 AT2G36780 28.606 409 243 15 4 376 5 400 1.39e-42 155
MS.gene027547.t1 AT4G34131 28.814 413 237 18 5 376 2 398 4.47e-42 154
MS.gene027547.t1 AT5G38010 30.025 403 231 9 6 379 3 383 8.32e-42 152
MS.gene027547.t1 AT3G16520 32.982 285 161 10 108 375 113 384 3.78e-41 150
MS.gene027547.t1 AT3G16520 32.982 285 161 10 108 375 113 384 4.52e-41 150
MS.gene027547.t1 AT3G16520 32.982 285 161 10 108 375 113 384 4.66e-41 150
MS.gene027547.t1 AT5G05880 30.827 399 224 14 9 379 4 378 7.02e-41 150
MS.gene027547.t1 AT5G03490 28.792 389 236 12 13 379 19 388 1.05e-40 149
MS.gene027547.t1 AT2G36750 30.175 401 230 15 12 376 9 395 1.59e-40 149
MS.gene027547.t1 AT3G46690 29.243 383 235 9 13 375 9 375 1.73e-40 149
MS.gene027547.t1 AT3G55710 31.392 395 225 14 13 379 8 384 4.52e-40 148
MS.gene027547.t1 AT5G05900 29.442 394 239 13 7 379 2 377 5.31e-40 147
MS.gene027547.t1 AT3G46680 28.756 386 241 9 13 379 9 379 6.03e-40 147
MS.gene027547.t1 AT2G36770 26.716 408 252 14 4 376 5 400 6.97e-40 148
MS.gene027547.t1 AT1G22370 36.239 218 132 4 164 375 14 230 7.19e-40 144
MS.gene027547.t1 AT1G73880 30.993 413 229 18 2 379 3 394 1.17e-39 147
MS.gene027547.t1 AT3G46700 28.974 390 230 15 13 379 9 374 7.52e-39 144
MS.gene027547.t1 AT1G10400 27.273 396 242 16 10 375 4 383 8.84e-39 144
MS.gene027547.t1 AT5G38040 31.392 395 202 14 21 379 18 379 1.97e-38 143
MS.gene027547.t1 AT5G05860 28.866 388 244 10 6 376 2 374 3.29e-38 142
MS.gene027547.t1 AT2G36800 27.007 411 252 14 2 376 1 399 7.85e-38 142
MS.gene027547.t1 AT2G16890 28.316 392 237 11 13 375 9 385 8.62e-38 141
MS.gene027547.t1 AT3G21800 27.027 407 238 9 10 375 2 390 1.41e-37 141
MS.gene027547.t1 AT2G29710 29.337 392 239 13 10 375 2 381 1.63e-37 141
MS.gene027547.t1 AT3G11340 26.913 379 250 10 14 379 10 374 1.65e-37 140
MS.gene027547.t1 AT2G16890 28.316 392 237 11 13 375 9 385 2.01e-37 141
MS.gene027547.t1 AT3G46720 31.593 383 225 14 13 379 9 370 3.44e-37 140
MS.gene027547.t1 AT5G17030 28.101 395 242 13 9 379 8 384 4.89e-37 139
MS.gene027547.t1 AT3G22250 28.571 399 234 12 14 376 9 392 7.79e-37 139
MS.gene027547.t1 AT2G29730 28.499 393 241 13 10 375 2 381 1.16e-36 139
MS.gene027547.t1 AT2G29750 26.942 412 235 12 9 375 4 394 1.62e-36 139
MS.gene027547.t1 AT1G51210 29.016 386 234 14 13 379 20 384 1.77e-36 137
MS.gene027547.t1 AT5G26310 30.000 400 225 15 13 375 7 388 3.82e-36 137
MS.gene027547.t1 AT3G55700 29.243 383 237 13 13 375 8 376 4.75e-36 137
MS.gene027547.t1 AT5G49690 29.082 392 227 15 12 375 9 377 4.89e-36 137
MS.gene027547.t1 AT2G26480 27.226 393 227 12 13 375 8 371 8.41e-36 136
MS.gene027547.t1 AT5G65550 31.234 397 222 18 11 375 7 384 9.95e-36 136
MS.gene027547.t1 AT3G21790 26.601 406 239 12 13 375 4 393 1.05e-35 136
MS.gene027547.t1 AT2G29740 27.561 410 235 10 9 375 4 394 1.47e-35 135
MS.gene027547.t1 AT4G34138 27.073 410 238 16 10 376 8 399 1.40e-34 133
MS.gene027547.t1 AT3G53160 28.218 404 235 17 12 376 7 394 1.93e-34 133
MS.gene027547.t1 AT2G36790 28.117 409 251 15 1 376 1 399 6.19e-34 132
MS.gene027547.t1 AT3G21780 25.253 396 252 8 11 375 2 384 8.29e-34 131
MS.gene027547.t1 AT5G66690 27.654 405 228 13 13 375 7 388 1.22e-33 130
MS.gene027547.t1 AT3G50740 28.261 414 227 13 13 379 7 397 1.34e-33 130
MS.gene027547.t1 AT5G14860 27.670 412 223 15 13 375 8 393 1.44e-33 130
MS.gene027547.t1 AT5G05890 26.515 396 249 11 9 379 4 382 4.54e-33 129
MS.gene027547.t1 AT5G12890 27.338 417 231 14 10 376 7 401 5.70e-33 129
MS.gene027547.t1 AT5G53990 26.289 388 237 12 10 376 3 362 5.98e-33 128
MS.gene027547.t1 AT3G53150 26.485 404 249 15 10 376 19 411 1.32e-32 128
MS.gene027547.t1 AT3G21750 25.373 402 244 10 11 375 2 384 2.60e-32 127
MS.gene027547.t1 AT3G21760 26.253 419 231 11 11 375 2 396 5.03e-32 126
MS.gene027547.t1 AT5G17040 32.877 219 133 3 164 379 59 266 6.98e-32 123
MS.gene027547.t1 AT4G36770 28.019 414 220 13 11 375 2 386 3.89e-31 123
MS.gene027547.t1 AT5G37950 29.153 295 173 5 92 369 70 345 5.67e-31 121
MS.gene027547.t1 AT1G07260 27.612 402 240 14 11 375 4 391 7.81e-31 122
MS.gene027547.t1 AT5G37950 31.293 294 162 8 92 369 70 339 2.48e-30 119
MS.gene027547.t1 AT4G15280 25.791 411 252 12 3 375 26 421 9.39e-30 120
MS.gene027547.t1 AT1G07250 26.119 402 249 13 10 375 3 392 2.95e-29 118
MS.gene027547.t1 AT1G64910 25.450 389 241 13 9 376 2 362 6.98e-29 117
MS.gene027547.t1 AT2G18570 33.333 243 119 7 161 379 166 389 1.12e-28 116
MS.gene027547.t1 AT4G15280 26.055 403 245 12 11 375 2 389 1.30e-28 116
MS.gene027547.t1 AT1G07240 24.069 403 256 12 10 375 2 391 1.57e-28 116
MS.gene027547.t1 AT2G18560 32.099 243 122 7 161 379 76 299 2.95e-27 111
MS.gene027547.t1 AT5G54010 24.619 394 244 11 9 376 2 368 3.37e-27 112
MS.gene027547.t1 AT4G01070 28.994 338 185 10 13 322 8 318 4.58e-27 110
MS.gene027547.t1 AT1G64920 25.888 394 237 15 9 376 2 366 1.36e-25 107
MS.gene027547.t1 AT3G29630 26.302 384 238 14 13 376 6 364 3.41e-25 106
MS.gene027547.t1 AT4G15260 28.975 283 163 8 116 375 2 269 8.60e-25 104
MS.gene027547.t1 AT4G27570 24.173 393 238 12 13 376 7 368 1.53e-24 104
MS.gene027547.t1 AT3G29630 26.720 378 218 12 13 376 6 338 2.06e-24 103
MS.gene027547.t1 AT4G09500 24.021 383 246 11 13 376 6 362 4.48e-24 103
MS.gene027547.t1 AT4G27560 24.173 393 238 12 13 376 7 368 1.61e-23 102
MS.gene027547.t1 AT2G22930 22.622 389 244 12 13 376 6 362 7.04e-22 97.1
MS.gene027547.t1 AT1G50580 24.872 390 243 13 9 376 2 363 1.10e-21 96.7
MS.gene027547.t1 AT2G22590 23.020 404 252 14 9 375 11 392 8.53e-21 94.0
MS.gene027547.t1 AT5G54060 25.728 412 251 15 1 379 1 390 1.50e-20 93.2
MS.gene027547.t1 AT2G23210 26.523 279 183 10 10 277 7 274 2.53e-20 90.5
MS.gene027547.t1 AT1G06000 32.275 189 103 6 205 376 178 358 1.17e-17 84.3
MS.gene027547.t1 AT4G09500 35.156 128 77 2 255 376 210 337 2.59e-16 80.5
MS.gene027547.t1 AT2G15490 23.735 257 165 7 9 241 3 252 1.62e-11 64.7

Find 74 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTGTCCTTGTGCTGGATA+TGG 0.240050 5.3:+24275668 None:intergenic
AAGGGTATGGAGCAAATTTA+TGG 0.263548 5.3:-24274806 MS.gene027547:CDS
TGAGTGAAGATTGCATTAAT+TGG 0.270840 5.3:-24274776 MS.gene027547:CDS
TGAAAGTTACCCTGCTTATA+TGG 0.273177 5.3:-24275174 MS.gene027547:CDS
AAAGTGAAGTGAATTTCTTA+TGG 0.295838 5.3:-24274653 MS.gene027547:CDS
GTTCCTTCTGCTTACTTAGA+TGG 0.303927 5.3:-24274846 MS.gene027547:CDS
GTGTAACCAACTAGAATTAT+TGG 0.322221 5.3:-24274550 MS.gene027547:CDS
AATACATTTGAAGCTTTAGA+AGG 0.325832 5.3:-24275098 MS.gene027547:CDS
GAACATTGTTGTTGTAGTTT+TGG 0.330597 5.3:+24275705 None:intergenic
ATATAAGCAGGGTAACTTTC+AGG 0.345186 5.3:+24275176 None:intergenic
CAAATTTAAATCAAGCTGAT+TGG 0.345604 5.3:-24275130 MS.gene027547:CDS
GAGAAAGAGTTCAACATTGT+TGG 0.352328 5.3:+24275493 None:intergenic
AATGAGGTTTGAGAGTGTTT+TGG 0.357948 5.3:+24275448 None:intergenic
AAGTGAAGTGAATTTCTTAT+GGG 0.361840 5.3:-24274652 MS.gene027547:CDS
GCTAAACAACATGGGATATA+TGG 0.368764 5.3:-24275350 MS.gene027547:CDS
ATAGAATCTTTGTACCCCTT+TGG 0.387662 5.3:+24274600 None:intergenic
TCTGATGGGTTCGACGAATC+CGG 0.389070 5.3:-24275527 MS.gene027547:CDS
GCAAATAGAAGAGCTGGCTT+TGG 0.394825 5.3:-24274685 MS.gene027547:CDS
CAAATAGAAGAGCTGGCTTT+GGG 0.397560 5.3:-24274684 MS.gene027547:CDS
CAAAGATTCTATCAAAGAAA+AGG 0.398161 5.3:-24274589 MS.gene027547:CDS
TGTGGTGTGTTTGCCACAAT+GGG 0.416931 5.3:-24274451 MS.gene027547:CDS
ATCAAAGGCAATTCATCAAC+AGG 0.418143 5.3:+24275254 None:intergenic
TCAGTGGTGTACATCTCATT+TGG 0.424701 5.3:-24274732 MS.gene027547:CDS
CTGTGGTGTGTTTGCCACAA+TGG 0.434411 5.3:-24274452 MS.gene027547:CDS
ATGTTTCCTGCTAAATTGAT+TGG 0.435113 5.3:-24274876 MS.gene027547:CDS
TGCTAAATTGATTGGTCCAA+TGG 0.436681 5.3:-24274868 MS.gene027547:CDS
CTCACTTCATTCAAAACCAA+TGG 0.450750 5.3:-24275473 MS.gene027547:CDS
ATTGGTTCGACAGAGATGTT+TGG 0.459900 5.3:+24275551 None:intergenic
TTAATGCAATCTTCACTCAA+TGG 0.462648 5.3:+24274780 None:intergenic
TGTGTCCTTGTGCTGGATAT+GGG 0.463765 5.3:+24275669 None:intergenic
ATCTGAGCAAATAGAAGAGC+TGG 0.471976 5.3:-24274691 MS.gene027547:CDS
TTTGTATTATAGGTTGTGAA+AGG 0.472117 5.3:-24274909 MS.gene027547:intron
TCAGGAAATCTTATAAAACT+TGG 0.478491 5.3:+24275194 None:intergenic
AACTTCATAGCCATATAAGC+AGG 0.478952 5.3:+24275164 None:intergenic
TCGTCGAACCCATCAGAGAT+TGG 0.480355 5.3:+24275533 None:intergenic
ATTGGACCAATCAATTTAGC+AGG 0.490090 5.3:+24274870 None:intergenic
GGACTAATGTGTCCTTGTGC+TGG 0.492266 5.3:+24275662 None:intergenic
TCATACACAATGCAAGTGAT+TGG 0.499867 5.3:+24275401 None:intergenic
CATGTGCCAATAATTCTAGT+TGG 0.504138 5.3:+24274544 None:intergenic
AAAGATTCTATCAAAGAAAA+GGG 0.505195 5.3:-24274588 MS.gene027547:CDS
GTACATCTCATTTGGAAGCA+TGG 0.509576 5.3:-24274724 MS.gene027547:CDS
ATCAAAGGAGACAAAGGGTA+TGG 0.516111 5.3:-24274819 MS.gene027547:CDS
GAATTGCCTTTGATTGTACC+TGG 0.526634 5.3:-24275245 MS.gene027547:CDS
TTGTATTATAGGTTGTGAAA+GGG 0.528055 5.3:-24274908 MS.gene027547:intron
TCTGTCGAACCAATCTCTGA+TGG 0.530114 5.3:-24275542 MS.gene027547:CDS
GAGCAAGGAAAATTACCAAA+GGG 0.530734 5.3:-24274615 MS.gene027547:CDS
GGAAGATCTCTAGAATTCAA+TGG 0.531119 5.3:+24275215 None:intergenic
CTTGATGTTGCTAAACAACA+TGG 0.541379 5.3:-24275359 MS.gene027547:CDS
TACTTAGATGGAAGAATCAA+AGG 0.552258 5.3:-24274834 MS.gene027547:CDS
GGAAGAATCAAAGGAGACAA+AGG 0.555117 5.3:-24274825 MS.gene027547:CDS
AAGTAAGCAGAAGGAACCAT+TGG 0.560336 5.3:+24274852 None:intergenic
GAAGAATCAAAGGAGACAAA+GGG 0.563073 5.3:-24274824 MS.gene027547:CDS
GGAAGACCAGGTACAATCAA+AGG 0.565814 5.3:+24275239 None:intergenic
CTGTCGAACCAATCTCTGAT+GGG 0.568980 5.3:-24275541 MS.gene027547:CDS
GAATTCAATGGAGGAAGACC+AGG 0.574734 5.3:+24275227 None:intergenic
ATTTGAAGCTTTAGAAGGAG+AGG 0.576940 5.3:-24275093 MS.gene027547:intron
CTTCCATCTAAGTAAGCAGA+AGG 0.580606 5.3:+24274843 None:intergenic
GTAATGGGTTGTTGCAAATG+TGG 0.584893 5.3:+24275595 None:intergenic
ACACTTGAGAGTCTAAGTCT+TGG 0.586395 5.3:-24274480 MS.gene027547:CDS
TTATTGGCACATGATGCTGT+TGG 0.590681 5.3:-24274534 MS.gene027547:CDS
TGCAAAGCCATCACAATCAG+TGG 0.611111 5.3:-24274748 MS.gene027547:CDS
ACTTCATAGCCATATAAGCA+GGG 0.620841 5.3:+24275165 None:intergenic
TCTAAGTCTTGGTGTTCCTG+TGG 0.623369 5.3:-24274469 MS.gene027547:CDS
GGCAATTGATCAGCCCATTG+TGG 0.626636 5.3:+24274438 None:intergenic
CATTGTGGCAAACACACCAC+AGG 0.637336 5.3:+24274453 None:intergenic
AGAGCAAGGAAAATTACCAA+AGG 0.640751 5.3:-24274616 MS.gene027547:CDS
TTAGCAACATCAAGTGCCCA+AGG 0.641911 5.3:+24275368 None:intergenic
AAAAGGGTATAATTGTAACA+TGG 0.647818 5.3:-24274572 MS.gene027547:CDS
TTGATGTTGCTAAACAACAT+GGG 0.671981 5.3:-24275358 MS.gene027547:CDS
GTGATCCCATATCCAGCACA+AGG 0.680747 5.3:-24275674 MS.gene027547:CDS
TTCGACAGAGATGTTTGGTG+CGG 0.690908 5.3:+24275556 None:intergenic
AGATCTCTAGAATTCAATGG+AGG 0.691278 5.3:+24275218 None:intergenic
AGCAAGGAAAATTACCAAAG+GGG 0.693527 5.3:-24274614 MS.gene027547:CDS
ATGTACACCACTGATTGTGA+TGG 0.698550 5.3:+24274741 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATAAAATATTTGATATT+TGG - chr5.3:24275116-24275135 MS.gene027547:CDS 10.0%
!!! CAATTTTCTTTTTGTATTAT+AGG - chr5.3:24275229-24275248 MS.gene027547:CDS 15.0%
!! AAAATTCATAAGAGAAAGAT+TGG + chr5.3:24275185-24275204 None:intergenic 20.0%
!! AAAGATTCTATCAAAGAAAA+GGG - chr5.3:24275560-24275579 MS.gene027547:CDS 20.0%
!! TCGATAAAGATTAATGTATT+TGG + chr5.3:24275162-24275181 None:intergenic 20.0%
!!! AAACTAATCTTTTTGAGAAT+TGG + chr5.3:24274518-24274537 None:intergenic 20.0%
!!! CTTTCTCTTATGAATTTTAA+CGG - chr5.3:24275187-24275206 MS.gene027547:CDS 20.0%
!!! TCAAAAAGATTAGTTTCAAA+AGG - chr5.3:24274522-24274541 MS.gene027547:CDS 20.0%
! AAAGTGAAGTGAATTTCTTA+TGG - chr5.3:24275495-24275514 MS.gene027547:CDS 25.0%
! AAGTGAAGTGAATTTCTTAT+GGG - chr5.3:24275496-24275515 MS.gene027547:CDS 25.0%
! CAAAGATTCTATCAAAGAAA+AGG - chr5.3:24275559-24275578 MS.gene027547:CDS 25.0%
! CAAATTTAAATCAAGCTGAT+TGG - chr5.3:24275018-24275037 MS.gene027547:intron 25.0%
! TCAGGAAATCTTATAAAACT+TGG + chr5.3:24274957-24274976 None:intergenic 25.0%
! TTGTATTATAGGTTGTGAAA+GGG - chr5.3:24275240-24275259 MS.gene027547:CDS 25.0%
! TTTGTATTATAGGTTGTGAA+AGG - chr5.3:24275239-24275258 MS.gene027547:CDS 25.0%
!! AAAAGGGTATAATTGTAACA+TGG - chr5.3:24275576-24275595 MS.gene027547:CDS 25.0%
!! GATAGATTTTACAGTGTAAT+GGG + chr5.3:24274571-24274590 None:intergenic 25.0%
!! TGATAGATTTTACAGTGTAA+TGG + chr5.3:24274572-24274591 None:intergenic 25.0%
!! TGATATTTGGTTGATGTATT+TGG - chr5.3:24275129-24275148 MS.gene027547:CDS 25.0%
!!! AATACATTTGAAGCTTTAGA+AGG - chr5.3:24275050-24275069 MS.gene027547:intron 25.0%
!!! ATTTTTTGTCGTATACATCA+TGG - chr5.3:24274858-24274877 MS.gene027547:CDS 25.0%
!!! TTTTTTGGTGTTTTTGAATG+AGG + chr5.3:24274719-24274738 None:intergenic 25.0%
ATGTTTCCTGCTAAATTGAT+TGG - chr5.3:24275272-24275291 MS.gene027547:CDS 30.0%
GTGTAACCAACTAGAATTAT+TGG - chr5.3:24275598-24275617 MS.gene027547:CDS 30.0%
TACTTAGATGGAAGAATCAA+AGG - chr5.3:24275314-24275333 MS.gene027547:CDS 30.0%
TGAGTGAAGATTGCATTAAT+TGG - chr5.3:24275372-24275391 MS.gene027547:CDS 30.0%
TTAATGCAATCTTCACTCAA+TGG + chr5.3:24275371-24275390 None:intergenic 30.0%
TTGATGTTGCTAAACAACAT+GGG - chr5.3:24274790-24274809 MS.gene027547:CDS 30.0%
! GTATGATTCTTTTCTACCTT+GGG - chr5.3:24274764-24274783 MS.gene027547:CDS 30.0%
! TGTATGATTCTTTTCTACCT+TGG - chr5.3:24274763-24274782 MS.gene027547:CDS 30.0%
!! CTTTTTGAGAATTGGATTAG+TGG + chr5.3:24274510-24274529 None:intergenic 30.0%
!! GAACATTGTTGTTGTAGTTT+TGG + chr5.3:24274446-24274465 None:intergenic 30.0%
!!! TGATTGGTGTTGAAGTTTTT+TGG + chr5.3:24274734-24274753 None:intergenic 30.0%
AACTTCATAGCCATATAAGC+AGG + chr5.3:24274987-24275006 None:intergenic 35.0%
ACTTCATAGCCATATAAGCA+GGG + chr5.3:24274986-24275005 None:intergenic 35.0%
AGAGCAAGGAAAATTACCAA+AGG - chr5.3:24275532-24275551 MS.gene027547:CDS 35.0%
AGCAAGGAAAATTACCAAAG+GGG - chr5.3:24275534-24275553 MS.gene027547:CDS 35.0%
ATAGAATCTTTGTACCCCTT+TGG + chr5.3:24275551-24275570 None:intergenic 35.0%
ATATAAGCAGGGTAACTTTC+AGG + chr5.3:24274975-24274994 None:intergenic 35.0%
ATCAAAGGCAATTCATCAAC+AGG + chr5.3:24274897-24274916 None:intergenic 35.0%
ATTGGACCAATCAATTTAGC+AGG + chr5.3:24275281-24275300 None:intergenic 35.0%
CATGTGCCAATAATTCTAGT+TGG + chr5.3:24275607-24275626 None:intergenic 35.0%
CTCACTTCATTCAAAACCAA+TGG - chr5.3:24274675-24274694 MS.gene027547:CDS 35.0%
CTTGATGTTGCTAAACAACA+TGG - chr5.3:24274789-24274808 MS.gene027547:CDS 35.0%
GAAGAATCAAAGGAGACAAA+GGG - chr5.3:24275324-24275343 MS.gene027547:CDS 35.0%
GAGAAAGAGTTCAACATTGT+TGG + chr5.3:24274658-24274677 None:intergenic 35.0%
GAGCAAGGAAAATTACCAAA+GGG - chr5.3:24275533-24275552 MS.gene027547:CDS 35.0%
GCTAAACAACATGGGATATA+TGG - chr5.3:24274798-24274817 MS.gene027547:CDS 35.0%
TCATACACAATGCAAGTGAT+TGG + chr5.3:24274750-24274769 None:intergenic 35.0%
TGAAAGTTACCCTGCTTATA+TGG - chr5.3:24274974-24274993 MS.gene027547:intron 35.0%
! AAGGGTATGGAGCAAATTTA+TGG - chr5.3:24275342-24275361 MS.gene027547:CDS 35.0%
! TGCTAAATTGATTGGTCCAA+TGG - chr5.3:24275280-24275299 MS.gene027547:CDS 35.0%
!! AGATCTCTAGAATTCAATGG+AGG + chr5.3:24274933-24274952 None:intergenic 35.0%
!! ATTGTTGGCTTGTGAAAAAC+CGG + chr5.3:24274643-24274662 None:intergenic 35.0%
!! ATTTGAAGCTTTAGAAGGAG+AGG - chr5.3:24275055-24275074 MS.gene027547:intron 35.0%
!! GGAAGATCTCTAGAATTCAA+TGG + chr5.3:24274936-24274955 None:intergenic 35.0%
!!! AATGAGGTTTGAGAGTGTTT+TGG + chr5.3:24274703-24274722 None:intergenic 35.0%
AAGTAAGCAGAAGGAACCAT+TGG + chr5.3:24275299-24275318 None:intergenic 40.0%
ACACTTGAGAGTCTAAGTCT+TGG - chr5.3:24275668-24275687 MS.gene027547:CDS 40.0%
ATCAAAGGAGACAAAGGGTA+TGG - chr5.3:24275329-24275348 MS.gene027547:CDS 40.0%
ATCTGAGCAAATAGAAGAGC+TGG - chr5.3:24275457-24275476 MS.gene027547:CDS 40.0%
CTTCCATCTAAGTAAGCAGA+AGG + chr5.3:24275308-24275327 None:intergenic 40.0%
GAATTGCCTTTGATTGTACC+TGG - chr5.3:24274903-24274922 MS.gene027547:intron 40.0%
GGAAGAATCAAAGGAGACAA+AGG - chr5.3:24275323-24275342 MS.gene027547:CDS 40.0%
GTACATCTCATTTGGAAGCA+TGG - chr5.3:24275424-24275443 MS.gene027547:CDS 40.0%
GTTCCTTCTGCTTACTTAGA+TGG - chr5.3:24275302-24275321 MS.gene027547:CDS 40.0%
TCAGTGGTGTACATCTCATT+TGG - chr5.3:24275416-24275435 MS.gene027547:CDS 40.0%
TTATTGGCACATGATGCTGT+TGG - chr5.3:24275614-24275633 MS.gene027547:CDS 40.0%
! ATGTACACCACTGATTGTGA+TGG + chr5.3:24275410-24275429 None:intergenic 40.0%
! GGATGTTTTGTGACACATTG+TGG - chr5.3:24275635-24275654 MS.gene027547:CDS 40.0%
! GTTTTGTGACACATTGTGGT+TGG - chr5.3:24275639-24275658 MS.gene027547:CDS 40.0%
!! ATTGGTTCGACAGAGATGTT+TGG + chr5.3:24274600-24274619 None:intergenic 40.0%
!! CAAATAGAAGAGCTGGCTTT+GGG - chr5.3:24275464-24275483 MS.gene027547:CDS 40.0%
!! GTAATGGGTTGTTGCAAATG+TGG + chr5.3:24274556-24274575 None:intergenic 40.0%
!!! GTTTTAAGAGAGTCAGAGCA+AGG - chr5.3:24275518-24275537 MS.gene027547:CDS 40.0%
!!! TGAGAGTGTTTTGGAACCAT+TGG + chr5.3:24274694-24274713 None:intergenic 40.0%
ATGTGTCCTTGTGCTGGATA+TGG + chr5.3:24274483-24274502 None:intergenic 45.0%
CTGTCGAACCAATCTCTGAT+GGG - chr5.3:24274607-24274626 MS.gene027547:CDS 45.0%
GAATTCAATGGAGGAAGACC+AGG + chr5.3:24274924-24274943 None:intergenic 45.0%
GGAAGACCAGGTACAATCAA+AGG + chr5.3:24274912-24274931 None:intergenic 45.0%
TCTGTCGAACCAATCTCTGA+TGG - chr5.3:24274606-24274625 MS.gene027547:CDS 45.0%
TGCAAAGCCATCACAATCAG+TGG - chr5.3:24275400-24275419 MS.gene027547:CDS 45.0%
TGTGGTGTGTTTGCCACAAT+GGG - chr5.3:24275697-24275716 MS.gene027547:CDS 45.0%
TGTGTCCTTGTGCTGGATAT+GGG + chr5.3:24274482-24274501 None:intergenic 45.0%
TTAGCAACATCAAGTGCCCA+AGG + chr5.3:24274783-24274802 None:intergenic 45.0%
! GCAAATAGAAGAGCTGGCTT+TGG - chr5.3:24275463-24275482 MS.gene027547:CDS 45.0%
! TTCGACAGAGATGTTTGGTG+CGG + chr5.3:24274595-24274614 None:intergenic 45.0%
!! TCTAAGTCTTGGTGTTCCTG+TGG - chr5.3:24275679-24275698 MS.gene027547:CDS 45.0%
CATTGTGGCAAACACACCAC+AGG + chr5.3:24275698-24275717 None:intergenic 50.0%
CTGTGGTGTGTTTGCCACAA+TGG - chr5.3:24275696-24275715 MS.gene027547:CDS 50.0%
GGACTAATGTGTCCTTGTGC+TGG + chr5.3:24274489-24274508 None:intergenic 50.0%
GGCAATTGATCAGCCCATTG+TGG + chr5.3:24275713-24275732 None:intergenic 50.0%
GTGATCCCATATCCAGCACA+AGG - chr5.3:24274474-24274493 MS.gene027547:CDS 50.0%
TCGTCGAACCCATCAGAGAT+TGG + chr5.3:24274618-24274637 None:intergenic 50.0%
!! TCTGATGGGTTCGACGAATC+CGG - chr5.3:24274621-24274640 MS.gene027547:CDS 50.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 24274429 24275741 24274429 ID=MS.gene027547
chr5.3 mRNA 24274429 24275741 24274429 ID=MS.gene027547.t1;Parent=MS.gene027547
chr5.3 exon 24275094 24275741 24275094 ID=MS.gene027547.t1.exon1;Parent=MS.gene027547.t1
chr5.3 CDS 24275094 24275741 24275094 ID=cds.MS.gene027547.t1;Parent=MS.gene027547.t1
chr5.3 exon 24274429 24274919 24274429 ID=MS.gene027547.t1.exon2;Parent=MS.gene027547.t1
chr5.3 CDS 24274429 24274919 24274429 ID=cds.MS.gene027547.t1;Parent=MS.gene027547.t1
Gene Sequence

>MS.gene027547

ATGGTGGTACAGAGCCAAAACTACAACAACAATGTTCATGTCTTAGTGATCCCATATCCAGCACAAGGACACATTAGTCCACTAATCCAATTCTCAAAAAGATTAGTTTCAAAAGGCATCAAAACCACATTTGCAACAACCCATTACACTGTAAAATCTATCACCGCACCAAACATCTCTGTCGAACCAATCTCTGATGGGTTCGACGAATCCGGTTTTTCACAAGCCAACAATGTTGAACTCTTTCTCACTTCATTCAAAACCAATGGTTCCAAAACACTCTCAAACCTCATTCAAAAACACCAAAAAACTTCAACACCAATCACTTGCATTGTGTATGATTCTTTTCTACCTTGGGCACTTGATGTTGCTAAACAACATGGGATATATGGTGCTGCTTTTTTCACTAATTCAGCTGCTGTTTGTAACATTTTTTGTCGTATACATCATGGTTTGATTAAAACTCCTGTTGATGAATTGCCTTTGATTGTACCTGGTCTTCCTCCATTGAATTCTAGAGATCTTCCAAGTTTTATAAGATTTCCTGAAAGTTACCCTGCTTATATGGCTATGAAGTTAAATCAATTCTCAAATTTAAATCAAGCTGATTGGATGTTTGTCAATACATTTGAAGCTTTAGAAGGAGAGGTACAAATTCTTAGCATTTTATTATTCATTTTTCATTCATGAATAAAATATTTGATATTTGGTTGATGTATTTGGTCTCAAACCAAATACATTAATCTTTATCGACCAATCTTTCTCTTATGAATTTTAACGGACAATTAATTGATGATTAACAATTTTCTTTTTGTATTATAGGTTGTGAAAGGGCTAACTGAGATGTTTCCTGCTAAATTGATTGGTCCAATGGTTCCTTCTGCTTACTTAGATGGAAGAATCAAAGGAGACAAAGGGTATGGAGCAAATTTATGGAAGCCATTGAGTGAAGATTGCATTAATTGGTTAAATGCAAAGCCATCACAATCAGTGGTGTACATCTCATTTGGAAGCATGGTTTCTTTAACATCTGAGCAAATAGAAGAGCTGGCTTTGGGATTAAAAGAAAGTGAAGTGAATTTCTTATGGGTTTTAAGAGAGTCAGAGCAAGGAAAATTACCAAAGGGGTACAAAGATTCTATCAAAGAAAAGGGTATAATTGTAACATGGTGTAACCAACTAGAATTATTGGCACATGATGCTGTTGGATGTTTTGTGACACATTGTGGTTGGAATTCAACACTTGAGAGTCTAAGTCTTGGTGTTCCTGTGGTGTGTTTGCCACAATGGGCTGATCAATTGCCAGATGCAAA
Protein sequence

>MS.gene027547.t1

MVVQSQNYNNNVHVLVIPYPAQGHISPLIQFSKRLVSKGIKTTFATTHYTVKSITAPNISVEPISDGFDESGFSQANNVELFLTSFKTNGSKTLSNLIQKHQKTSTPITCIVYDSFLPWALDVAKQHGIYGAAFFTNSAAVCNIFCRIHHGLIKTPVDELPLIVPGLPPLNSRDLPSFIRFPESYPAYMAMKLNQFSNLNQADWMFVNTFEALEGEVVKGLTEMFPAKLIGPMVPSAYLDGRIKGDKGYGANLWKPLSEDCINWLNAKPSQSVVYISFGSMVSLTSEQIEELALGLKESEVNFLWVLRESEQGKLPKGYKDSIKEKGIIVTWCNQLELLAHDAVGCFVTHCGWNSTLESLSLGVPVVCLPQWADQLPDA