AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68301

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68301.t1 MTR_5g035560 84.052 464 23 1 1 413 1 464 0.0 781
MS.gene68301.t1 MTR_5g035580 83.047 466 26 2 1 413 1 466 0.0 773
MS.gene68301.t1 MTR_6g038200 40.969 454 214 2 1 400 1 454 1.79e-121 360
MS.gene68301.t1 MTR_6g038230 41.518 448 208 2 7 400 7 454 2.95e-121 360
MS.gene68301.t1 MTR_6g038220 41.280 453 213 2 1 400 1 453 6.97e-117 348
MS.gene68301.t1 MTR_6g038240 38.667 450 222 2 11 406 11 460 9.44e-114 341
MS.gene68301.t1 MTR_6g038300 38.938 452 221 2 4 400 4 455 5.95e-109 328
MS.gene68301.t1 MTR_7g080940 38.530 449 220 6 8 402 8 454 1.90e-107 324
MS.gene68301.t1 MTR_7g080935 38.865 458 224 6 1 404 1 456 2.28e-106 322
MS.gene68301.t1 MTR_8g088560 38.022 455 216 7 8 400 7 457 4.54e-101 308
MS.gene68301.t1 MTR_7g080950 36.830 448 229 5 8 402 3 449 5.89e-101 308
MS.gene68301.t1 MTR_7g080900 34.521 449 236 8 9 401 10 456 2.06e-84 265
MS.gene68301.t1 MTR_8g083290 33.909 463 224 16 12 398 5 461 6.57e-71 230
MS.gene68301.t1 MTR_1g107380 29.325 474 257 8 10 409 12 481 2.14e-63 211
MS.gene68301.t1 MTR_8g083280 31.368 475 231 16 7 401 3 462 6.84e-63 210
MS.gene68301.t1 MTR_3g049970 31.224 474 235 13 10 402 8 471 2.15e-62 209
MS.gene68301.t1 MTR_1g107350 31.478 467 239 13 10 400 7 468 2.42e-61 206
MS.gene68301.t1 MTR_1g107375 30.349 458 243 12 9 400 6 453 5.51e-58 196
MS.gene68301.t1 MTR_1g107315 30.932 472 241 12 9 402 6 470 6.11e-56 192
MS.gene68301.t1 MTR_1g107365 29.670 455 249 12 10 400 44 491 5.72e-55 189
MS.gene68301.t1 MTR_1g107360 29.095 464 260 12 3 400 1 461 4.32e-53 184
MS.gene68301.t1 MTR_1g107285 27.862 463 256 10 10 400 7 463 6.09e-52 181
MS.gene68301.t1 MTR_3g084520 33.819 343 203 10 8 332 3 339 1.91e-51 179
MS.gene68301.t1 MTR_3g084520 48.052 77 39 1 325 400 396 472 1.72e-15 78.6
MS.gene68301.t1 MTR_4g095008 30.271 479 248 17 1 404 1 468 3.98e-51 180
MS.gene68301.t1 MTR_7g080960 39.631 217 127 3 9 221 10 226 7.24e-50 175
MS.gene68301.t1 MTR_7g080960 34.343 198 89 4 226 401 293 471 5.44e-25 107
MS.gene68301.t1 MTR_1g032490 33.438 317 185 7 9 306 8 317 3.13e-48 171
MS.gene68301.t1 MTR_4g094920 29.938 481 247 17 1 404 16 483 1.43e-44 162
MS.gene68301.t1 MTR_3g084540 32.727 330 201 9 8 319 3 329 3.13e-44 160
MS.gene68301.t1 MTR_3g084540 48.718 78 38 2 325 400 396 473 7.46e-15 76.6
MS.gene68301.t1 MTR_5g464810 26.585 489 245 14 8 401 9 478 4.20e-44 160
MS.gene68301.t1 MTR_5g064240 26.585 489 245 14 8 401 9 478 4.20e-44 160
MS.gene68301.t1 MTR_3g479520 26.625 477 258 12 11 402 15 484 5.28e-44 160
MS.gene68301.t1 MTR_0036s0220 27.329 483 244 16 11 401 12 479 1.07e-43 159
MS.gene68301.t1 MTR_8g064880 32.803 314 191 8 10 306 8 318 3.28e-43 157
MS.gene68301.t1 MTR_3g479490 25.462 487 263 11 7 404 2 477 5.18e-43 157
MS.gene68301.t1 MTR_5g016480 28.421 475 253 18 10 404 7 474 3.95e-42 154
MS.gene68301.t1 MTR_5g464760 25.462 487 255 14 8 401 9 480 2.02e-41 153
MS.gene68301.t1 MTR_3g079480 26.087 483 257 12 11 404 21 492 3.86e-41 152
MS.gene68301.t1 MTR_8g064870 31.949 313 191 8 10 306 10 316 2.12e-40 150
MS.gene68301.t1 MTR_3g084530 31.818 330 204 9 8 319 3 329 1.54e-39 147
MS.gene68301.t1 MTR_3g084530 51.948 77 36 1 325 400 396 472 2.48e-16 80.9
MS.gene68301.t1 MTR_6g014186 26.398 447 259 15 11 401 7 439 1.45e-38 144
MS.gene68301.t1 MTR_2g008210 25.417 480 256 14 11 401 11 477 5.99e-38 143
MS.gene68301.t1 MTR_3g008010 29.204 339 199 9 2 306 1 332 9.54e-37 140
MS.gene68301.t1 MTR_4g094220 25.934 482 249 12 11 397 7 475 1.34e-35 137
MS.gene68301.t1 MTR_6g013440 28.824 340 195 10 5 306 5 335 2.89e-35 136
MS.gene68301.t1 MTR_7g013180 25.431 464 248 15 9 398 3 442 1.17e-34 134
MS.gene68301.t1 MTR_6g014040 28.060 335 193 11 11 306 10 335 6.61e-34 132
MS.gene68301.t1 MTR_7g013260 25.551 454 249 15 11 397 6 437 8.53e-34 131
MS.gene68301.t1 MTR_7g013240 25.702 463 236 15 11 397 6 436 2.55e-33 130
MS.gene68301.t1 MTR_6g014290 27.246 334 202 8 7 306 6 332 3.91e-33 130
MS.gene68301.t1 MTR_7g013200 25.813 461 247 15 11 401 5 440 5.16e-33 129
MS.gene68301.t1 MTR_6g014220 27.164 335 201 8 7 306 6 332 8.68e-33 129
MS.gene68301.t1 MTR_7g011470 29.206 315 200 8 11 306 10 320 9.02e-33 129
MS.gene68301.t1 MTR_5g072820 24.895 474 249 15 5 400 4 448 1.17e-32 128
MS.gene68301.t1 MTR_7g011470 29.299 314 197 8 11 306 10 316 4.71e-32 127
MS.gene68301.t1 MTR_6g014250 26.946 334 203 9 7 306 6 332 5.56e-32 127
MS.gene68301.t1 MTR_5g072810 24.788 472 255 15 2 397 3 450 8.72e-31 123
MS.gene68301.t1 MTR_7g055710 27.957 372 207 14 1 333 1 350 4.57e-30 121
MS.gene68301.t1 MTR_3g031450 26.154 455 256 16 11 403 18 454 5.55e-30 121
MS.gene68301.t1 MTR_6g011340 24.532 481 263 16 11 401 10 480 7.03e-30 120
MS.gene68301.t1 MTR_6g014270 27.596 337 193 12 11 306 7 333 9.79e-30 120
MS.gene68301.t1 MTR_5g072830 28.614 332 187 12 5 312 4 309 1.01e-29 120
MS.gene68301.t1 MTR_6g014150 25.361 485 254 17 11 401 7 477 1.16e-29 120
MS.gene68301.t1 MTR_3g479470 25.216 464 254 14 11 389 13 468 1.66e-29 120
MS.gene68301.t1 MTR_6g013680 27.394 376 231 14 56 401 12 375 2.86e-29 117
MS.gene68301.t1 MTR_6g013960 26.506 332 201 11 11 306 10 334 3.06e-29 119
MS.gene68301.t1 MTR_0288s0020 26.426 333 189 9 7 306 6 315 4.24e-29 118
MS.gene68301.t1 MTR_6g014310 27.003 337 193 10 11 306 11 335 4.46e-29 118
MS.gene68301.t1 MTR_5g072840 26.752 314 203 7 5 306 4 302 6.31e-29 117
MS.gene68301.t1 MTR_6g014200 28.060 335 192 12 11 306 7 331 8.00e-29 117
MS.gene68301.t1 MTR_7g013220 25.370 473 239 18 11 398 5 448 8.15e-29 117
MS.gene68301.t1 MTR_8g059425 25.904 332 201 9 11 306 10 332 2.25e-28 116
MS.gene68301.t1 MTR_6g014187 26.061 330 205 12 11 306 10 334 3.50e-28 116
MS.gene68301.t1 MTR_5g072860 25.887 479 247 17 11 406 18 471 4.92e-28 115
MS.gene68301.t1 MTR_5g087620 29.518 332 188 13 11 306 10 331 7.19e-28 115
MS.gene68301.t1 MTR_6g013900 27.964 329 199 12 11 306 10 333 1.22e-27 114
MS.gene68301.t1 MTR_4g064987 26.496 468 246 18 12 404 9 453 1.72e-27 114
MS.gene68301.t1 MTR_7g070610 26.836 354 222 10 7 333 9 352 1.90e-27 114
MS.gene68301.t1 MTR_6g013990 24.686 478 270 17 11 404 10 481 2.33e-27 114
MS.gene68301.t1 MTR_7g070660 27.978 361 216 13 1 333 1 345 2.88e-27 113
MS.gene68301.t1 MTR_4g064987 25.813 461 252 16 12 404 9 447 4.79e-27 112
MS.gene68301.t1 MTR_6g013450 26.506 332 202 12 11 306 10 335 1.19e-26 111
MS.gene68301.t1 MTR_3g031400 30.159 315 176 11 11 307 18 306 1.37e-26 111
MS.gene68301.t1 MTR_6g014050 26.946 334 197 10 11 306 11 335 1.63e-26 111
MS.gene68301.t1 MTR_5g075440 25.314 478 243 20 10 402 9 457 2.38e-26 110
MS.gene68301.t1 MTR_5g031840 28.739 341 199 15 11 319 5 333 4.29e-26 110
MS.gene68301.t1 MTR_3g069690 29.393 313 195 9 6 306 3 301 9.38e-26 108
MS.gene68301.t1 MTR_6g014170 27.103 321 203 11 7 306 6 316 1.54e-25 108
MS.gene68301.t1 MTR_7g070740 26.087 368 219 13 1 333 1 350 1.76e-25 108
MS.gene68301.t1 MTR_6g014020 26.190 336 197 11 11 306 10 334 2.38e-25 108
MS.gene68301.t1 MTR_6g013920 26.748 329 203 11 11 306 10 333 4.94e-25 107
MS.gene68301.t1 MTR_5g031860 25.625 480 253 19 11 404 12 473 7.08e-25 106
MS.gene68301.t1 MTR_5g016660 28.212 358 202 13 13 333 12 351 2.13e-24 105
MS.gene68301.t1 MTR_5g031830 24.948 481 256 18 11 404 12 474 2.43e-24 105
MS.gene68301.t1 MTR_7g070800 28.375 363 200 18 8 333 3 342 2.70e-24 105
MS.gene68301.t1 MTR_6g013435 28.090 267 169 7 148 401 51 307 3.85e-24 102
MS.gene68301.t1 MTR_8g465670 28.344 314 187 11 12 306 8 302 1.03e-23 103
MS.gene68301.t1 MTR_7g047030 27.187 320 190 10 11 307 6 305 1.78e-23 102
MS.gene68301.t1 MTR_7g047270 27.187 320 190 10 11 307 6 305 1.78e-23 102
MS.gene68301.t1 MTR_4g485630 26.346 353 209 16 3 322 1 335 2.24e-23 102
MS.gene68301.t1 MTR_7g071040 26.997 363 225 14 1 334 7 358 3.34e-23 102
MS.gene68301.t1 MTR_0891s0010 26.370 292 152 6 171 404 7 293 4.74e-23 98.6
MS.gene68301.t1 MTR_3g479610 25.397 315 168 7 146 402 9 314 4.88e-23 99.0
MS.gene68301.t1 MTR_7g070930 25.414 362 224 14 4 333 7 354 5.06e-23 101
MS.gene68301.t1 MTR_7g070860 28.070 342 184 16 6 310 2 318 9.53e-23 100
MS.gene68301.t1 MTR_8g077590 28.532 361 206 14 11 347 9 341 1.07e-22 100
MS.gene68301.t1 MTR_5g090660 27.429 350 214 14 12 336 6 340 1.21e-22 100
MS.gene68301.t1 MTR_7g117405 26.705 352 220 11 1 327 1 339 1.39e-22 99.8
MS.gene68301.t1 MTR_4g108250 26.810 373 214 14 1 333 1 354 1.49e-22 100
MS.gene68301.t1 MTR_0184s0040 26.374 364 214 11 10 347 20 355 2.52e-22 99.4
MS.gene68301.t1 MTR_0078s0190 26.374 364 214 11 10 347 20 355 2.52e-22 99.4
MS.gene68301.t1 MTR_8g012745 26.062 353 224 9 9 337 4 343 3.20e-22 99.0
MS.gene68301.t1 MTR_6g014300 24.561 342 191 12 5 306 6 320 4.43e-22 98.2
MS.gene68301.t1 MTR_5g040030 27.019 359 223 13 4 333 7 355 5.04e-22 98.2
MS.gene68301.t1 MTR_8g009050 26.791 321 191 11 9 306 4 303 5.30e-22 98.2
MS.gene68301.t1 MTR_6g014240 23.480 477 237 19 10 397 6 443 5.54e-22 97.8
MS.gene68301.t1 MTR_5g090630 28.527 319 180 10 12 307 6 299 6.59e-22 97.8
MS.gene68301.t1 MTR_3g069710 26.885 305 200 7 12 306 13 304 7.08e-22 97.8
MS.gene68301.t1 MTR_5g058320 26.380 326 194 13 11 306 10 319 8.25e-22 97.4
MS.gene68301.t1 MTR_8g006220 28.308 325 173 12 12 306 7 301 8.79e-22 97.4
MS.gene68301.t1 MTR_1g107340 29.098 244 149 7 10 234 7 245 1.04e-21 94.0
MS.gene68301.t1 MTR_5g090620 27.358 318 194 9 12 307 6 308 1.60e-21 96.7
MS.gene68301.t1 MTR_0078s0010 26.646 319 191 9 11 306 6 304 1.76e-21 96.7
MS.gene68301.t1 MTR_0009s0240 26.667 345 211 12 7 324 3 332 1.84e-21 96.7
MS.gene68301.t1 MTR_7g102450 25.466 322 210 9 1 307 1 307 2.03e-21 96.3
MS.gene68301.t1 MTR_7g070780 24.104 502 270 16 1 405 1 488 2.10e-21 96.7
MS.gene68301.t1 MTR_0078s0060 25.946 370 209 13 9 347 4 339 2.31e-21 96.3
MS.gene68301.t1 MTR_8g066610 26.239 343 219 13 5 319 3 339 4.71e-21 95.5
MS.gene68301.t1 MTR_8g009063 27.217 327 186 11 7 306 9 310 6.02e-21 95.1
MS.gene68301.t1 MTR_5g098930 25.507 345 189 10 10 320 4 314 6.55e-21 94.7
MS.gene68301.t1 MTR_0184s0030 26.349 315 200 10 10 306 5 305 8.79e-21 94.4
MS.gene68301.t1 MTR_4g128720 22.588 456 268 11 10 397 14 452 9.49e-21 94.4
MS.gene68301.t1 MTR_8g009055 28.267 329 176 13 9 306 4 303 1.20e-20 94.0
MS.gene68301.t1 MTR_0078s0200 26.415 318 196 11 10 306 5 305 1.36e-20 92.0
MS.gene68301.t1 MTR_7g070910 24.725 364 232 14 1 334 1 352 1.60e-20 94.0
MS.gene68301.t1 MTR_5g090700 26.409 337 198 13 12 317 6 323 1.73e-20 93.6
MS.gene68301.t1 MTR_6g033625 25.068 367 214 14 14 349 5 341 1.77e-20 93.6
MS.gene68301.t1 MTR_7g071050 25.205 365 174 16 4 333 6 306 2.22e-20 92.8
MS.gene68301.t1 MTR_6g033725 23.779 471 257 17 14 398 5 459 2.95e-20 92.8
MS.gene68301.t1 MTR_8g008990 27.640 322 187 11 9 306 4 303 3.07e-20 92.8
MS.gene68301.t1 MTR_8g008990 42.667 75 43 0 322 396 390 464 5.85e-11 64.3
MS.gene68301.t1 MTR_1g029540 24.765 319 189 12 16 313 19 307 3.13e-20 92.8
MS.gene68301.t1 MTR_5g045970 27.964 329 197 16 8 308 13 329 5.29e-20 92.4
MS.gene68301.t1 MTR_7g070940 24.719 356 226 12 3 333 1 339 8.99e-20 91.7
MS.gene68301.t1 MTR_6g033675 23.733 375 209 16 14 349 5 341 1.17e-19 91.3
MS.gene68301.t1 MTR_3g009510 27.100 369 216 13 12 349 6 352 1.48e-19 90.9
MS.gene68301.t1 MTR_8g071070 26.462 359 204 16 7 324 3 342 1.57e-19 90.9
MS.gene68301.t1 MTR_8g006260 28.840 319 183 12 11 304 6 305 2.22e-19 90.5
MS.gene68301.t1 MTR_6g035295 25.767 326 206 9 9 308 10 325 2.72e-19 90.1
MS.gene68301.t1 MTR_8g012635 26.398 322 206 9 9 312 4 312 2.90e-19 90.1
MS.gene68301.t1 MTR_5g045960 25.155 322 207 11 9 305 7 319 3.50e-19 89.7
MS.gene68301.t1 MTR_6g033615 24.625 467 229 16 14 389 5 439 4.16e-19 89.4
MS.gene68301.t1 MTR_7g117170 27.385 325 178 11 12 306 16 312 4.80e-19 89.4
MS.gene68301.t1 MTR_8g074550 27.219 338 167 16 11 306 8 308 5.18e-19 89.4
MS.gene68301.t1 MTR_5g090580 25.568 352 220 11 12 336 6 342 5.82e-19 89.0
MS.gene68301.t1 MTR_8g083300 37.037 135 76 4 12 139 8 140 7.06e-19 83.6
MS.gene68301.t1 MTR_1g019510 27.302 315 195 10 9 306 4 301 7.91e-19 88.6
MS.gene68301.t1 MTR_5g098960 24.847 326 218 9 12 321 8 322 1.11e-18 88.2
MS.gene68301.t1 MTR_8g006270 27.517 298 181 7 17 307 32 301 1.37e-18 87.8
MS.gene68301.t1 MTR_8g006230 30.252 238 135 8 100 325 46 264 2.49e-18 85.1
MS.gene68301.t1 MTR_2g098430 23.894 339 206 10 12 318 7 325 3.03e-18 87.0
MS.gene68301.t1 MTR_8g009073 26.730 318 195 13 9 306 4 303 3.31e-18 86.7
MS.gene68301.t1 MTR_5g004940 32.609 184 84 4 257 400 194 377 4.20e-18 85.9
MS.gene68301.t1 MTR_5g004940 26.882 186 115 5 6 174 11 192 6.61e-16 79.3
MS.gene68301.t1 MTR_7g070810 25.000 368 211 16 3 333 1 340 5.98e-18 85.9
MS.gene68301.t1 MTR_6g033660 29.515 227 126 10 94 306 104 310 7.16e-18 85.9
MS.gene68301.t1 MTR_8g012650 28.063 253 152 7 102 337 106 345 8.37e-18 85.5
MS.gene68301.t1 MTR_5g090600 26.140 329 204 9 12 321 6 314 2.60e-17 84.0
MS.gene68301.t1 MTR_5g039900 23.724 333 205 10 8 308 10 325 2.61e-17 84.0
MS.gene68301.t1 MTR_5g067170 24.342 304 210 8 15 305 15 311 2.86e-17 84.0
MS.gene68301.t1 MTR_4g117960 25.076 331 212 10 15 319 15 335 3.80e-17 83.6
MS.gene68301.t1 MTR_8g027885 26.752 314 188 9 12 306 19 309 4.44e-17 83.2
MS.gene68301.t1 MTR_2g034990 24.839 310 203 8 15 305 15 313 6.69e-17 82.8
MS.gene68301.t1 MTR_0536s0020 25.672 335 203 12 12 319 19 334 8.66e-17 82.4
MS.gene68301.t1 MTR_4g024020 25.731 342 192 13 10 310 8 328 9.46e-17 82.4
MS.gene68301.t1 MTR_5g090670 24.383 324 198 10 12 307 6 310 1.15e-16 82.0
MS.gene68301.t1 MTR_6g005600 24.471 331 182 12 11 306 6 303 1.35e-16 82.0
MS.gene68301.t1 MTR_2g046750 23.837 344 209 13 12 326 6 325 1.95e-16 81.3
MS.gene68301.t1 MTR_4g117980 26.012 346 192 12 15 319 15 337 2.00e-16 81.3
MS.gene68301.t1 MTR_7g070870 25.143 350 216 13 10 333 18 347 2.38e-16 81.3
MS.gene68301.t1 MTR_4g128690 24.852 338 214 10 7 324 11 328 2.40e-16 80.9
MS.gene68301.t1 MTR_6g023665 25.231 325 184 11 12 306 14 309 2.63e-16 80.9
MS.gene68301.t1 MTR_7g102560 24.507 355 212 14 3 323 1 333 2.66e-16 80.9
MS.gene68301.t1 MTR_7g102550 26.844 339 197 15 5 309 3 324 3.08e-16 80.9
MS.gene68301.t1 MTR_6g035185 23.344 317 207 11 15 309 15 317 3.53e-16 80.5
MS.gene68301.t1 MTR_7g470610 29.130 230 127 10 115 333 3 207 3.76e-16 79.0
MS.gene68301.t1 MTR_7g070583 29.130 230 127 10 115 333 3 207 3.76e-16 79.0
MS.gene68301.t1 MTR_7g046490 24.545 330 180 11 11 306 6 300 4.01e-16 80.5
MS.gene68301.t1 MTR_4g485590 23.926 326 197 11 5 310 3 297 4.07e-16 80.1
MS.gene68301.t1 MTR_8g009067 27.245 323 187 11 9 306 4 303 4.62e-16 80.1
MS.gene68301.t1 MTR_6g036650 25.000 348 215 12 6 324 13 343 6.23e-16 79.7
MS.gene68301.t1 MTR_3g479620 30.714 140 85 2 11 138 6 145 6.41e-16 75.5
MS.gene68301.t1 MTR_2g008225 25.220 341 219 11 7 324 11 338 6.57e-16 79.7
MS.gene68301.t1 MTR_7g102460 25.072 347 223 12 3 323 1 336 2.26e-15 78.2
MS.gene68301.t1 MTR_4g082810 26.471 374 207 13 10 350 6 344 2.80e-15 77.4
MS.gene68301.t1 MTR_8g006730 24.922 321 202 10 7 306 2 304 3.49e-15 77.4
MS.gene68301.t1 MTR_4g082820 26.503 366 215 10 10 350 6 342 4.11e-15 77.4
MS.gene68301.t1 MTR_8g027870 26.266 316 187 10 12 306 19 309 4.26e-15 77.4
MS.gene68301.t1 MTR_4g008630 23.313 326 204 10 8 313 11 310 4.43e-15 77.0
MS.gene68301.t1 MTR_2g008226 26.912 353 205 15 7 323 6 341 4.99e-15 77.0
MS.gene68301.t1 MTR_5g070090 26.269 335 191 13 1 303 1 311 6.37e-15 76.6
MS.gene68301.t1 MTR_6g042310 24.854 342 223 12 4 324 8 336 6.39e-15 76.6
MS.gene68301.t1 MTR_4g117950 26.727 333 195 13 15 319 10 321 6.66e-15 76.6
MS.gene68301.t1 MTR_8g008970 25.697 323 192 10 9 306 4 303 8.33e-15 77.0
MS.gene68301.t1 MTR_5g027210 23.167 341 216 12 12 318 5 333 1.16e-14 75.9
MS.gene68301.t1 MTR_5g090650 26.648 349 191 15 10 336 4 309 1.50e-14 74.7
MS.gene68301.t1 MTR_2g040530 23.894 339 205 11 12 320 6 321 1.77e-14 75.5
MS.gene68301.t1 MTR_6g488280 24.332 337 180 13 8 306 3 302 1.97e-14 75.1
MS.gene68301.t1 MTR_0428s0010 24.332 337 180 13 8 306 3 302 1.97e-14 75.1
MS.gene68301.t1 MTR_7g067120 23.453 307 196 8 11 306 9 287 2.02e-14 75.1
MS.gene68301.t1 MTR_4g117890 25.291 344 221 10 12 333 14 343 2.37e-14 75.1
MS.gene68301.t1 MTR_4g031800 25.070 355 224 15 5 333 3 341 2.37e-14 75.1
MS.gene68301.t1 MTR_8g090095 25.076 331 185 13 16 316 30 327 2.62e-14 74.7
MS.gene68301.t1 MTR_6g014190 31.884 138 89 4 171 306 7 141 3.57e-14 73.2
MS.gene68301.t1 MTR_6g052375 29.583 240 131 10 146 364 15 237 4.74e-14 73.2
MS.gene68301.t1 MTR_1g040310 24.860 358 215 15 10 333 14 351 6.12e-14 73.9
MS.gene68301.t1 MTR_8g044140 28.270 237 151 8 109 333 87 316 8.20e-14 73.2
MS.gene68301.t1 MTR_4g485620 25.610 328 214 13 25 329 3 323 8.62e-14 73.2
MS.gene68301.t1 MTR_6g035265 25.077 323 190 14 15 312 15 310 1.22e-13 72.8
MS.gene68301.t1 MTR_4g485640 25.305 328 210 12 21 332 219 527 1.24e-13 73.2
MS.gene68301.t1 MTR_6g078320 22.523 333 203 10 11 306 11 325 1.25e-13 72.8
MS.gene68301.t1 MTR_2g046620 24.022 358 208 15 2 323 4 333 1.39e-13 72.4
MS.gene68301.t1 MTR_8g006710 25.275 364 223 15 7 347 2 339 2.37e-13 72.0
MS.gene68301.t1 MTR_8g032950 23.750 320 197 14 12 305 13 311 3.47e-13 71.2
MS.gene68301.t1 MTR_4g077960 25.000 332 196 13 21 323 2 309 4.41e-13 70.9
MS.gene68301.t1 MTR_8g068340 23.620 326 214 9 3 306 4 316 4.68e-13 70.9
MS.gene68301.t1 MTR_8g009067 30.151 199 113 7 118 306 3 185 6.57e-13 70.1
MS.gene68301.t1 MTR_1g090270 20.539 482 239 16 4 381 5 446 8.17e-13 70.1
MS.gene68301.t1 MTR_2g059240 24.079 353 218 12 1 319 1 337 1.16e-12 69.7
MS.gene68301.t1 MTR_8g007565 23.054 334 204 12 8 308 4 317 2.00e-12 68.9
MS.gene68301.t1 MTR_5g072850 26.877 253 138 11 187 403 144 385 2.01e-12 68.6
MS.gene68301.t1 MTR_5g019580 23.313 326 209 9 7 307 3 312 2.90e-12 68.6
MS.gene68301.t1 MTR_5g029800 26.623 308 200 12 15 307 15 311 3.19e-12 68.6
MS.gene68301.t1 MTR_4g118000 25.237 317 193 13 15 312 16 307 3.60e-12 68.2
MS.gene68301.t1 MTR_5g090690 24.082 245 137 7 71 307 35 238 4.94e-12 67.4
MS.gene68301.t1 MTR_8g466240 25.501 349 213 15 11 333 8 335 4.99e-12 67.8
MS.gene68301.t1 MTR_7g012120 25.243 309 200 12 15 305 20 315 5.09e-12 67.8
MS.gene68301.t1 MTR_5g090610 23.810 315 197 11 11 307 5 294 7.25e-12 67.4
MS.gene68301.t1 MTR_0199s0010 23.265 245 150 7 7 219 6 244 7.30e-12 65.9
MS.gene68301.t1 MTR_8g007650 22.754 334 205 12 8 308 4 317 1.31e-11 66.6
MS.gene68301.t1 MTR_2g035020 23.676 321 203 8 10 305 10 313 1.45e-11 66.2
MS.gene68301.t1 MTR_2g046820 23.611 360 212 12 12 337 6 336 2.26e-11 65.9
MS.gene68301.t1 MTR_8g009073 30.519 154 85 6 159 306 37 174 3.02e-11 64.7
MS.gene68301.t1 MTR_8g007585 25.974 154 99 4 7 147 6 157 5.42e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68301.t1 AT1G24100 42.478 452 194 7 11 400 11 458 8.82e-120 356
MS.gene68301.t1 AT2G43820 41.685 451 195 8 11 402 7 448 2.25e-114 342
MS.gene68301.t1 AT2G43840 41.685 451 191 10 11 400 7 446 3.48e-110 331
MS.gene68301.t1 AT2G43840 41.463 451 192 10 11 400 7 446 4.58e-109 328
MS.gene68301.t1 AT1G05675 37.946 448 213 5 11 397 6 449 5.38e-97 298
MS.gene68301.t1 AT1G05680 37.862 449 212 5 11 397 6 449 6.94e-96 295
MS.gene68301.t1 AT2G31750 38.000 450 210 7 11 397 8 451 1.83e-92 286
MS.gene68301.t1 AT2G31750 37.500 456 216 7 11 403 8 457 4.87e-92 286
MS.gene68301.t1 AT2G31790 35.683 454 229 6 5 397 2 453 3.37e-87 273
MS.gene68301.t1 AT3G21560 28.294 463 257 10 11 400 12 472 1.05e-59 202
MS.gene68301.t1 AT4G15490 28.367 490 246 13 7 409 4 475 8.46e-59 199
MS.gene68301.t1 AT4G15480 29.552 335 206 7 8 319 16 343 1.85e-50 177
MS.gene68301.t1 AT4G15500 31.746 315 196 7 11 311 9 318 9.57e-48 170
MS.gene68301.t1 AT2G23260 28.850 461 252 14 5 400 4 453 6.22e-47 167
MS.gene68301.t1 AT2G23250 27.891 441 246 13 20 400 7 435 6.09e-45 161
MS.gene68301.t1 AT1G22370 27.601 471 254 14 11 401 13 476 6.58e-43 157
MS.gene68301.t1 AT1G22360 26.514 479 254 15 11 401 10 478 1.56e-42 156
MS.gene68301.t1 AT1G22400 26.096 479 265 11 11 405 13 486 2.36e-42 155
MS.gene68301.t1 AT1G22380 31.034 348 200 12 5 317 7 349 5.13e-42 154
MS.gene68301.t1 AT1G05530 32.154 311 181 8 11 307 5 299 1.50e-40 150
MS.gene68301.t1 AT1G05530 51.948 77 36 1 325 401 380 455 6.20e-16 79.7
MS.gene68301.t1 AT1G05560 32.468 308 181 9 11 307 5 296 5.82e-40 149
MS.gene68301.t1 AT1G05560 50.000 76 37 1 325 400 377 451 1.55e-14 75.5
MS.gene68301.t1 AT1G78270 25.767 489 263 13 5 404 7 484 5.96e-40 149
MS.gene68301.t1 AT1G05560 32.468 308 181 9 11 307 55 346 1.12e-39 149
MS.gene68301.t1 AT1G05560 50.000 76 37 1 325 400 427 501 1.43e-14 75.9
MS.gene68301.t1 AT2G28080 24.464 466 260 11 15 402 22 473 3.38e-39 147
MS.gene68301.t1 AT1G22360 26.022 465 262 19 11 401 10 466 2.33e-38 144
MS.gene68301.t1 AT2G36970 23.690 477 265 12 11 402 10 472 4.34e-37 141
MS.gene68301.t1 AT1G22340 27.523 327 201 8 11 306 13 334 5.09e-37 141
MS.gene68301.t1 AT4G14090 25.918 463 262 14 3 398 5 453 7.85e-37 140
MS.gene68301.t1 AT4G15550 28.972 321 187 9 11 307 13 316 4.31e-34 132
MS.gene68301.t1 AT2G30140 27.484 473 242 17 7 404 9 455 2.73e-33 130
MS.gene68301.t1 AT2G30140 27.331 472 243 17 7 404 9 454 4.84e-33 129
MS.gene68301.t1 AT3G02100 25.926 459 255 14 11 398 13 457 1.58e-32 128
MS.gene68301.t1 AT3G46670 26.609 466 245 16 11 403 9 450 8.97e-32 125
MS.gene68301.t1 AT2G30150 25.983 458 247 16 11 397 13 449 8.86e-30 120
MS.gene68301.t1 AT3G46650 26.013 469 227 16 11 403 10 434 6.71e-29 117
MS.gene68301.t1 AT2G30150 25.771 454 245 16 15 397 1 433 5.49e-28 115
MS.gene68301.t1 AT2G15490 23.577 492 263 15 6 400 2 477 1.14e-27 114
MS.gene68301.t1 AT4G01070 28.788 330 179 9 6 306 3 305 2.29e-26 108
MS.gene68301.t1 AT1G01420 29.721 323 187 10 5 306 2 305 3.42e-26 110
MS.gene68301.t1 AT1G01420 29.721 323 187 10 5 306 5 308 3.60e-26 110
MS.gene68301.t1 AT4G01070 28.788 330 179 9 6 306 3 305 3.77e-26 110
MS.gene68301.t1 AT5G59590 24.094 469 248 16 11 400 10 449 4.09e-26 110
MS.gene68301.t1 AT2G15480 27.326 344 207 13 10 319 9 343 1.18e-25 108
MS.gene68301.t1 AT2G15480 27.326 344 207 13 10 319 9 343 1.19e-25 108
MS.gene68301.t1 AT1G10400 24.153 472 266 15 10 402 6 464 1.29e-25 108
MS.gene68301.t1 AT5G17050 23.454 469 260 12 11 402 12 458 1.36e-24 105
MS.gene68301.t1 AT1G73880 26.477 491 249 20 1 402 1 468 1.52e-24 105
MS.gene68301.t1 AT5G59580 24.947 469 251 18 11 404 9 451 2.37e-24 104
MS.gene68301.t1 AT2G15490 25.000 352 212 11 6 321 2 337 7.22e-24 103
MS.gene68301.t1 AT2G36760 26.154 325 200 10 10 306 13 325 1.74e-23 102
MS.gene68301.t1 AT3G46660 25.532 470 245 17 12 403 15 457 3.26e-23 101
MS.gene68301.t1 AT4G34131 27.324 355 208 18 7 324 6 347 8.03e-23 100
MS.gene68301.t1 AT1G01390 25.749 334 202 8 1 310 15 326 1.30e-22 100
MS.gene68301.t1 AT5G03490 25.581 344 213 11 4 324 11 334 2.87e-22 99.0
MS.gene68301.t1 AT1G01390 26.061 330 198 8 5 310 2 309 3.85e-22 98.6
MS.gene68301.t1 AT5G17040 23.195 457 268 11 9 401 3 440 6.14e-22 97.8
MS.gene68301.t1 AT5G38010 25.552 317 196 6 11 306 10 307 1.36e-21 96.7
MS.gene68301.t1 AT3G46700 23.142 471 246 16 11 400 9 444 1.48e-21 96.7
MS.gene68301.t1 AT5G49690 27.397 365 215 14 10 347 9 350 2.59e-21 95.9
MS.gene68301.t1 AT2G36780 26.571 350 211 15 9 324 12 349 3.20e-21 95.9
MS.gene68301.t1 AT1G22370 26.846 298 155 7 162 401 14 306 3.91e-21 93.6
MS.gene68301.t1 AT4G34135 23.851 348 228 12 7 324 7 347 4.17e-21 95.5
MS.gene68301.t1 AT3G46720 25.551 454 250 15 12 400 10 440 4.78e-21 95.1
MS.gene68301.t1 AT2G36750 28.000 350 203 15 10 324 9 344 4.93e-21 95.5
MS.gene68301.t1 AT3G46680 24.625 333 217 8 11 324 9 326 1.12e-20 94.0
MS.gene68301.t1 AT2G36770 25.076 331 204 12 10 310 13 329 2.21e-20 93.6
MS.gene68301.t1 AT3G46690 22.727 462 264 11 11 400 9 449 2.23e-20 93.2
MS.gene68301.t1 AT3G16520 30.288 208 125 7 106 306 113 307 2.63e-20 92.8
MS.gene68301.t1 AT3G16520 30.288 208 125 7 106 306 113 307 2.71e-20 93.2
MS.gene68301.t1 AT3G16520 30.288 208 125 7 106 306 113 307 2.85e-20 92.8
MS.gene68301.t1 AT5G05870 27.445 317 200 9 7 306 4 307 3.24e-20 92.8
MS.gene68301.t1 AT4G34135 23.939 330 217 11 7 309 7 329 3.35e-20 91.3
MS.gene68301.t1 AT5G05880 23.222 478 250 18 7 400 4 448 3.88e-20 92.4
MS.gene68301.t1 AT3G21800 23.706 367 229 8 8 347 2 344 1.53e-19 90.9
MS.gene68301.t1 AT5G05900 26.235 324 195 12 7 306 4 307 1.80e-19 90.5
MS.gene68301.t1 AT2G23210 27.208 283 180 12 6 275 5 274 2.52e-19 88.2
MS.gene68301.t1 AT2G36800 25.526 333 205 12 10 312 11 330 3.01e-19 90.1
MS.gene68301.t1 AT1G30530 23.478 460 263 15 11 401 12 451 3.50e-19 89.7
MS.gene68301.t1 AT5G38040 28.571 315 169 15 19 306 18 303 4.87e-18 86.3
MS.gene68301.t1 AT5G26310 26.822 343 209 14 11 331 7 329 6.43e-18 85.9
MS.gene68301.t1 AT1G51210 24.781 343 197 12 11 324 20 330 7.75e-18 85.5
MS.gene68301.t1 AT4G34138 23.810 483 266 19 8 400 8 478 1.29e-17 85.1
MS.gene68301.t1 AT5G12890 23.944 497 254 18 8 401 7 482 2.29e-17 84.3
MS.gene68301.t1 AT5G05860 24.688 320 205 10 3 306 1 300 5.91e-17 82.8
MS.gene68301.t1 AT5G66690 25.378 331 197 9 11 317 7 311 6.99e-17 82.8
MS.gene68301.t1 AT2G26480 23.442 337 204 11 11 324 8 313 1.16e-16 82.0
MS.gene68301.t1 AT3G21780 23.494 332 219 9 10 320 3 320 1.25e-16 82.0
MS.gene68301.t1 AT5G53990 21.369 482 261 17 7 408 2 445 1.62e-16 81.6
MS.gene68301.t1 AT3G21790 23.460 341 213 12 12 320 5 329 1.82e-16 81.6
MS.gene68301.t1 AT3G55710 26.183 317 194 11 12 306 9 307 2.63e-16 80.9
MS.gene68301.t1 AT3G53150 24.781 343 206 14 3 310 14 339 9.83e-16 79.3
MS.gene68301.t1 AT5G05890 23.343 347 216 11 7 324 4 329 3.63e-15 77.4
MS.gene68301.t1 AT3G11340 22.623 305 209 8 12 306 10 297 3.66e-15 77.4
MS.gene68301.t1 AT3G50740 26.225 347 211 14 11 331 7 334 3.78e-15 77.4
MS.gene68301.t1 AT3G21760 22.667 375 213 12 10 336 3 348 8.76e-15 76.3
MS.gene68301.t1 AT2G36790 25.982 331 205 13 10 312 12 330 4.13e-14 74.3
MS.gene68301.t1 AT2G29740 25.000 348 204 9 5 317 2 327 6.10e-14 73.9
MS.gene68301.t1 AT5G37950 24.883 213 132 3 106 306 83 279 9.31e-14 72.4
MS.gene68301.t1 AT2G29750 22.740 365 223 12 9 337 6 347 2.14e-13 72.0
MS.gene68301.t1 AT5G37950 26.291 213 123 5 106 306 83 273 2.61e-13 71.2
MS.gene68301.t1 AT3G21750 21.246 353 233 10 10 336 3 336 3.23e-13 71.6
MS.gene68301.t1 AT2G29710 23.460 341 225 8 9 324 3 332 4.39e-13 71.2
MS.gene68301.t1 AT1G64910 20.807 471 265 16 7 402 2 439 2.00e-12 68.9
MS.gene68301.t1 AT2G29730 24.189 339 217 13 8 319 2 327 2.90e-12 68.6
MS.gene68301.t1 AT5G54010 22.552 337 221 10 7 324 2 317 3.87e-12 68.2
MS.gene68301.t1 AT3G55700 23.871 310 208 11 11 306 8 303 1.33e-11 66.6
MS.gene68301.t1 AT1G64920 22.380 353 226 13 7 339 2 326 1.58e-11 66.2
MS.gene68301.t1 AT2G15490 22.703 185 118 4 6 166 2 185 5.26e-11 63.5

Find 79 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAGTATTTAGAGGAAATT+TGG 0.112057 5.2:-26108223 MS.gene68301:CDS
TTAATGCAATCTTCACTTAA+TGG 0.153891 5.2:+26108593 None:intergenic
ATGTGTCCTTGTGCTGGATA+TGG 0.240050 5.2:+26110132 None:intergenic
ATAAAATCTTTGTATTCTTT+TGG 0.244650 5.2:+26108413 None:intergenic
AAGGGTATGGAGCAAATTTA+TGG 0.263548 5.2:-26108619 MS.gene68301:CDS
TAAGTGAAGATTGCATTAAT+TGG 0.270840 5.2:-26108589 MS.gene68301:CDS
TGAAAGTTACCCTGCTTATA+TGG 0.273177 5.2:-26109638 MS.gene68301:CDS
AAAGTGAAGTGAATTTCTTA+TGG 0.295838 5.2:-26108466 MS.gene68301:CDS
GTTCCTTCTGCTTACTTAGA+TGG 0.303927 5.2:-26108659 MS.gene68301:CDS
GGATACGTTTGGTGCGGTTA+TGG 0.308410 5.2:+26110026 None:intergenic
GCCAGATGCAAAGTATTTAG+AGG 0.322912 5.2:-26108231 MS.gene68301:intron
AATACCTTTGAAGCTTTAGA+AGG 0.323349 5.2:-26109562 MS.gene68301:CDS
CTATTTCCTGCTAAATTGAT+TGG 0.338865 5.2:-26108689 MS.gene68301:CDS
ATATAAGCAGGGTAACTTTC+AGG 0.345186 5.2:+26109640 None:intergenic
AATGAGGTTTGAGAGTGTTT+TGG 0.357948 5.2:+26109912 None:intergenic
CTAATTTGAATCAAGCTGAT+TGG 0.360880 5.2:-26109594 MS.gene68301:CDS
AAGTGAAGTGAATTTCTTAT+GGG 0.361840 5.2:-26108465 MS.gene68301:CDS
TCAGTTGTGTATATCTCCTT+TGG 0.374088 5.2:-26108545 MS.gene68301:CDS
AGAATTTATGTTGAGTTTGA+AGG 0.376290 5.2:-26108150 MS.gene68301:CDS
GTTACAGACAGCAGCTGAAT+TGG 0.378617 5.2:+26109777 None:intergenic
TCCTGTTGATGAATTGCCTT+TGG 0.385043 5.2:-26109719 MS.gene68301:CDS
TTAGAGGAAATTTGGGAAGT+TGG 0.386537 5.2:-26108215 MS.gene68301:CDS
TCTGATGGGTTCGACGAATC+CGG 0.389070 5.2:-26109991 MS.gene68301:CDS
CAAATAGAAGAGCTGGCTTT+GGG 0.400000 5.2:-26108497 MS.gene68301:CDS
ACAAATAGAAGAGCTGGCTT+TGG 0.401874 5.2:-26108498 MS.gene68301:CDS
AAAGTATTTAGAGGAAATTT+GGG 0.403427 5.2:-26108222 MS.gene68301:CDS
TCAAAACGATTAGTTTCAAA+AGG 0.423653 5.2:-26110090 MS.gene68301:CDS
TGCTAAATTGATTGGTCCAA+TGG 0.436681 5.2:-26108681 MS.gene68301:CDS
GTATATCTCCTTTGGAAGCA+TGG 0.437333 5.2:-26108537 MS.gene68301:CDS
ACCAAAGGCAATTCATCAAC+AGG 0.444274 5.2:+26109718 None:intergenic
CTCACTTCATTCAAAACCAA+TGG 0.450750 5.2:-26109937 MS.gene68301:CDS
TAAGAATATTGATGAGTTTG+TGG 0.457417 5.2:-26108030 MS.gene68301:CDS
GAATTCAATGGAGGAACATC+AGG 0.459024 5.2:+26109691 None:intergenic
TGTGTCCTTGTGCTGGATAT+GGG 0.463765 5.2:+26110133 None:intergenic
TTTGATGAACACAAATAAGA+AGG 0.478090 5.2:-26108003 MS.gene68301:CDS
TCAGGAAATCTTATAAAACT+TGG 0.478491 5.2:+26109658 None:intergenic
TCGTCGAACCCATCAGAGAT+TGG 0.480355 5.2:+26109997 None:intergenic
TGTATTTGAAGGTTGTGAAA+GGG 0.481098 5.2:-26108721 MS.gene68301:intron
ATTGGACCAATCAATTTAGC+AGG 0.490090 5.2:+26108683 None:intergenic
CTCTCCTTCTAAAGCTTCAA+AGG 0.491824 5.2:+26109558 None:intergenic
GGACTAATGTGTCCTTGTGC+TGG 0.492266 5.2:+26110126 None:intergenic
AACTTCATAGCCATATAAGC+AGG 0.493059 5.2:+26109628 None:intergenic
ATCAGAACAAATAGAAGAGC+TGG 0.496142 5.2:-26108504 MS.gene68301:CDS
TTAGAAGAAATGCTAGTGAA+TGG 0.500015 5.2:-26108097 MS.gene68301:CDS
AGGCCAAAAGAGGATGAAAA+TGG 0.504839 5.2:-26108188 MS.gene68301:CDS
ATTGGTTCGACGGATACGTT+TGG 0.511541 5.2:+26110015 None:intergenic
ATCAAAGGAGACAAAGGGTA+TGG 0.516111 5.2:-26108632 MS.gene68301:CDS
TGCTAGTGAATGGAAGAAGT+TGG 0.523356 5.2:-26108087 MS.gene68301:CDS
GGAAGATCTCTAGAATTCAA+TGG 0.531119 5.2:+26109679 None:intergenic
TTGTATTTGAAGGTTGTGAA+AGG 0.532304 5.2:-26108722 MS.gene68301:intron
CTTGATGTTGCTAAACAACA+TGG 0.541379 5.2:-26109823 MS.gene68301:CDS
CTTTGAAGCTTTAGAAGGAG+AGG 0.545237 5.2:-26109557 MS.gene68301:intron
TACTTAGATGGAAGAATCAA+AGG 0.552258 5.2:-26108647 MS.gene68301:CDS
GGAAGAATCAAAGGAGACAA+AGG 0.555117 5.2:-26108638 MS.gene68301:CDS
TCATACACAATGCATGTGAT+TGG 0.555679 5.2:+26109865 None:intergenic
AGAGATGCTGTTTGTGAAGG+AGG 0.559298 5.2:-26108062 MS.gene68301:CDS
AAGTAAGCAGAAGGAACCAT+TGG 0.560336 5.2:+26108665 None:intergenic
TCCGTCGAACCAATCTCTGA+TGG 0.561353 5.2:-26110006 MS.gene68301:CDS
CCCATCAGAGATTGGTTCGA+CGG 0.562302 5.2:+26110005 None:intergenic
GAAGAATCAAAGGAGACAAA+GGG 0.563073 5.2:-26108637 MS.gene68301:CDS
GTTGAGTTTGAAGGTTGTGA+TGG 0.568417 5.2:-26108141 MS.gene68301:CDS
AGTTTGAAGGTTGTGATGGA+AGG 0.569295 5.2:-26108137 MS.gene68301:CDS
AGTTGGTGTGAGGCCAAAAG+AGG 0.574075 5.2:-26108198 MS.gene68301:CDS
CTTCCATCTAAGTAAGCAGA+AGG 0.580606 5.2:+26108656 None:intergenic
GCTAGAGATGCTGTTTGTGA+AGG 0.586922 5.2:-26108065 MS.gene68301:CDS
TTGATGAACACAAATAAGAA+GGG 0.592546 5.2:-26108002 MS.gene68301:CDS
CCGTCGAACCAATCTCTGAT+GGG 0.598551 5.2:-26110005 MS.gene68301:CDS
CAATTTAGCAGGAAATAGCT+CGG 0.603075 5.2:+26108694 None:intergenic
AAGAAGGGAAATGATTTGAG+TGG 0.604906 5.2:-26107987 MS.gene68301:CDS
TAAAGAAACCATGCTTCCAA+AGG 0.612065 5.2:+26108529 None:intergenic
ATATACACAACTGATTGTGA+TGG 0.621040 5.2:+26108554 None:intergenic
GGAACATCAGGTACAACCAA+AGG 0.622948 5.2:+26109703 None:intergenic
TTAGCAACATCAAGTGCCCA+AGG 0.641911 5.2:+26109832 None:intergenic
ACTTCATAGCCATATAAGCA+GGG 0.648921 5.2:+26109629 None:intergenic
TTGATGTTGCTAAACAACAT+GGG 0.649754 5.2:-26109822 MS.gene68301:CDS
AAATTTGGGAAGTTGGTGTG+AGG 0.651908 5.2:-26108208 MS.gene68301:CDS
GTGATCCCATATCCAGCACA+AGG 0.680747 5.2:-26110138 MS.gene68301:CDS
AGATCTCTAGAATTCAATGG+AGG 0.691278 5.2:+26109682 None:intergenic
TTCGACGGATACGTTTGGTG+CGG 0.700262 5.2:+26110020 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAATCAAAAAGA+GGG + chr5.2:26109398-26109417 None:intergenic 10.0%
!! TAAAAATAAAAATCAAAAAG+AGG + chr5.2:26109399-26109418 None:intergenic 10.0%
!!! AGAAAACATTTTTTTTTTTT+TGG + chr5.2:26109119-26109138 None:intergenic 10.0%
!! AATAGATAGAATAAAATACT+TGG + chr5.2:26108997-26109016 None:intergenic 15.0%
!! CTTTGAATTTATACTTAAAA+TGG - chr5.2:26108970-26108989 MS.gene68301:intron 15.0%
!! GATATTTAGTTAATGTATTT+GGG - chr5.2:26108716-26108735 MS.gene68301:intron 15.0%
!! TGATATTTAGTTAATGTATT+TGG - chr5.2:26108715-26108734 MS.gene68301:intron 15.0%
!!! AAAGATTTTATCAAAGAAAA+AGG - chr5.2:26109756-26109775 MS.gene68301:CDS 15.0%
!!! ATAAAATCTTTGTATTCTTT+TGG + chr5.2:26109747-26109766 None:intergenic 15.0%
!! ATAAATAGTCATGAATATTG+TGG + chr5.2:26108856-26108875 None:intergenic 20.0%
!!! AAAAAGGTATAATTGTAACA+TGG - chr5.2:26109772-26109791 MS.gene68301:CDS 20.0%
!!! AAAGTATTTAGAGGAAATTT+GGG - chr5.2:26109935-26109954 MS.gene68301:CDS 20.0%
!!! TTTTTTGGTATTTTTGAATG+AGG + chr5.2:26108264-26108283 None:intergenic 20.0%
! AAAAATCAAAAAGAGGGAAT+TGG + chr5.2:26109392-26109411 None:intergenic 25.0%
! AAAGTGAAGTGAATTTCTTA+TGG - chr5.2:26109691-26109710 MS.gene68301:CDS 25.0%
! AAATCACATCTTACATGTTT+GGG - chr5.2:26109260-26109279 MS.gene68301:intron 25.0%
! AAGTGAAGTGAATTTCTTAT+GGG - chr5.2:26109692-26109711 MS.gene68301:CDS 25.0%
! AGAATTTATGTTGAGTTTGA+AGG - chr5.2:26110007-26110026 MS.gene68301:CDS 25.0%
! ATTAAAAGTTGTGACGTTTA+TGG - chr5.2:26109349-26109368 MS.gene68301:intron 25.0%
! TAAGAATATTGATGAGTTTG+TGG - chr5.2:26110127-26110146 MS.gene68301:CDS 25.0%
! TAAGTGAAGATTGCATTAAT+TGG - chr5.2:26109568-26109587 MS.gene68301:CDS 25.0%
! TATTATAATAAAGGGTTGTG+AGG + chr5.2:26109330-26109349 None:intergenic 25.0%
! TCAGGAAATCTTATAAAACT+TGG + chr5.2:26108502-26108521 None:intergenic 25.0%
! TTAATGCAATCTTCACTTAA+TGG + chr5.2:26109567-26109586 None:intergenic 25.0%
! TTGATGAACACAAATAAGAA+GGG - chr5.2:26110155-26110174 MS.gene68301:CDS 25.0%
! TTTGATGAACACAAATAAGA+AGG - chr5.2:26110154-26110173 MS.gene68301:CDS 25.0%
!! CAAAGTATTTAGAGGAAATT+TGG - chr5.2:26109934-26109953 MS.gene68301:CDS 25.0%
!! GCTTTTCTATTTGTATTTGA+AGG - chr5.2:26109425-26109444 MS.gene68301:intron 25.0%
!!! AAACTAATCGTTTTGAGAAT+TGG + chr5.2:26108063-26108082 None:intergenic 25.0%
!!! ATTTTTTGTCGTATACATCA+TGG - chr5.2:26108403-26108422 MS.gene68301:CDS 25.0%
!!! CTAAACACATTTCAGTTTTT+TGG + chr5.2:26108924-26108943 None:intergenic 25.0%
!!! GTGAATATTTTAGTCATGAA+TGG + chr5.2:26108657-26108676 None:intergenic 25.0%
!!! TCAAAACGATTAGTTTCAAA+AGG - chr5.2:26108067-26108086 MS.gene68301:CDS 25.0%
ATATACACAACTGATTGTGA+TGG + chr5.2:26109606-26109625 None:intergenic 30.0%
CTAATTTGAATCAAGCTGAT+TGG - chr5.2:26108563-26108582 MS.gene68301:CDS 30.0%
CTATTTCCTGCTAAATTGAT+TGG - chr5.2:26109468-26109487 MS.gene68301:intron 30.0%
GAAATCACATCTTACATGTT+TGG - chr5.2:26109259-26109278 MS.gene68301:intron 30.0%
GTGTAACCAACTAGAATTAT+TGG - chr5.2:26109794-26109813 MS.gene68301:CDS 30.0%
TACTTAGATGGAAGAATCAA+AGG - chr5.2:26109510-26109529 MS.gene68301:intron 30.0%
TGTATTTGAAGGTTGTGAAA+GGG - chr5.2:26109436-26109455 MS.gene68301:intron 30.0%
TTAGAAGAAATGCTAGTGAA+TGG - chr5.2:26110060-26110079 MS.gene68301:CDS 30.0%
TTGATGTTGCTAAACAACAT+GGG - chr5.2:26108335-26108354 MS.gene68301:intron 30.0%
TTGTATTTGAAGGTTGTGAA+AGG - chr5.2:26109435-26109454 MS.gene68301:intron 30.0%
! GTATGATTCTTTTCTACCTT+GGG - chr5.2:26108309-26108328 MS.gene68301:intron 30.0%
! TGTATGATTCTTTTCTACCT+TGG - chr5.2:26108308-26108327 MS.gene68301:intron 30.0%
!! AATACCTTTGAAGCTTTAGA+AGG - chr5.2:26108595-26108614 MS.gene68301:CDS 30.0%
!!! TGATTGGTGTTGAAGTTTTT+TGG + chr5.2:26108279-26108298 None:intergenic 30.0%
AACTTCATAGCCATATAAGC+AGG + chr5.2:26108532-26108551 None:intergenic 35.0%
AAGAAGGGAAATGATTTGAG+TGG - chr5.2:26110170-26110189 MS.gene68301:CDS 35.0%
ACTTCATAGCCATATAAGCA+GGG + chr5.2:26108531-26108550 None:intergenic 35.0%
ATATAAGCAGGGTAACTTTC+AGG + chr5.2:26108520-26108539 None:intergenic 35.0%
ATCAGAACAAATAGAAGAGC+TGG - chr5.2:26109653-26109672 MS.gene68301:CDS 35.0%
ATTGGACCAATCAATTTAGC+AGG + chr5.2:26109477-26109496 None:intergenic 35.0%
CAATTTAGCAGGAAATAGCT+CGG + chr5.2:26109466-26109485 None:intergenic 35.0%
CATGTGCCAATAATTCTAGT+TGG + chr5.2:26109803-26109822 None:intergenic 35.0%
CTCACTTCATTCAAAACCAA+TGG - chr5.2:26108220-26108239 MS.gene68301:CDS 35.0%
CTTGATGTTGCTAAACAACA+TGG - chr5.2:26108334-26108353 MS.gene68301:intron 35.0%
GAAGAATCAAAGGAGACAAA+GGG - chr5.2:26109520-26109539 MS.gene68301:intron 35.0%
TAAAGAAACCATGCTTCCAA+AGG + chr5.2:26109631-26109650 None:intergenic 35.0%
TCAGTTGTGTATATCTCCTT+TGG - chr5.2:26109612-26109631 MS.gene68301:CDS 35.0%
TCATACACAATGCATGTGAT+TGG + chr5.2:26108295-26108314 None:intergenic 35.0%
TCCTCTAAATACTTTGCATC+TGG + chr5.2:26109930-26109949 None:intergenic 35.0%
TGAAAGTTACCCTGCTTATA+TGG - chr5.2:26108519-26108538 MS.gene68301:CDS 35.0%
TTAGAGGAAATTTGGGAAGT+TGG - chr5.2:26109942-26109961 MS.gene68301:CDS 35.0%
! AAGGGTATGGAGCAAATTTA+TGG - chr5.2:26109538-26109557 MS.gene68301:intron 35.0%
! ACACCATTTTCATCCTCTTT+TGG + chr5.2:26109975-26109994 None:intergenic 35.0%
! ATTGCTAGCTTGTGAAAAAC+CGG + chr5.2:26108188-26108207 None:intergenic 35.0%
! TGCTAAATTGATTGGTCCAA+TGG - chr5.2:26109476-26109495 MS.gene68301:intron 35.0%
!! AGATCTCTAGAATTCAATGG+AGG + chr5.2:26108478-26108497 None:intergenic 35.0%
!! GGAAGATCTCTAGAATTCAA+TGG + chr5.2:26108481-26108500 None:intergenic 35.0%
!!! AATGAGGTTTGAGAGTGTTT+TGG + chr5.2:26108248-26108267 None:intergenic 35.0%
!!! CGTTTTGAGAATTGGATTAG+TGG + chr5.2:26108055-26108074 None:intergenic 35.0%
AAGTAAGCAGAAGGAACCAT+TGG + chr5.2:26109495-26109514 None:intergenic 40.0%
ACACTTGAGAGTCTAAGTCT+TGG - chr5.2:26109864-26109883 MS.gene68301:CDS 40.0%
ACCAAAGGCAATTCATCAAC+AGG + chr5.2:26108442-26108461 None:intergenic 40.0%
AGGCCAAAAGAGGATGAAAA+TGG - chr5.2:26109969-26109988 MS.gene68301:CDS 40.0%
ATCAAAGGAGACAAAGGGTA+TGG - chr5.2:26109525-26109544 MS.gene68301:intron 40.0%
CTTCCATCTAAGTAAGCAGA+AGG + chr5.2:26109504-26109523 None:intergenic 40.0%
GAATTCAATGGAGGAACATC+AGG + chr5.2:26108469-26108488 None:intergenic 40.0%
GGAAGAATCAAAGGAGACAA+AGG - chr5.2:26109519-26109538 MS.gene68301:intron 40.0%
GTTCCTTCTGCTTACTTAGA+TGG - chr5.2:26109498-26109517 MS.gene68301:intron 40.0%
GTTGAGTTTGAAGGTTGTGA+TGG - chr5.2:26110016-26110035 MS.gene68301:CDS 40.0%
TGCTAGTGAATGGAAGAAGT+TGG - chr5.2:26110070-26110089 MS.gene68301:CDS 40.0%
TGTTGTGTGTTTGCCACAAT+GGG - chr5.2:26109893-26109912 MS.gene68301:CDS 40.0%
TTATTGGCACATGATGCTGT+TGG - chr5.2:26109810-26109829 MS.gene68301:CDS 40.0%
! ACAAATAGAAGAGCTGGCTT+TGG - chr5.2:26109659-26109678 MS.gene68301:CDS 40.0%
! AGTTTGAAGGTTGTGATGGA+AGG - chr5.2:26110020-26110039 MS.gene68301:CDS 40.0%
! GCCAGATGCAAAGTATTTAG+AGG - chr5.2:26109926-26109945 MS.gene68301:CDS 40.0%
! GGATGTTTTGTGACACATTG+TGG - chr5.2:26109831-26109850 MS.gene68301:CDS 40.0%
! GTATATCTCCTTTGGAAGCA+TGG - chr5.2:26109620-26109639 MS.gene68301:CDS 40.0%
! GTTTTGTGACACATTGTGGT+TGG - chr5.2:26109835-26109854 MS.gene68301:CDS 40.0%
! TCCTGTTGATGAATTGCCTT+TGG - chr5.2:26108438-26108457 MS.gene68301:CDS 40.0%
!! AAATTTGGGAAGTTGGTGTG+AGG - chr5.2:26109949-26109968 MS.gene68301:CDS 40.0%
!! CAAATAGAAGAGCTGGCTTT+GGG - chr5.2:26109660-26109679 MS.gene68301:CDS 40.0%
!! CTCTCCTTCTAAAGCTTCAA+AGG + chr5.2:26108602-26108621 None:intergenic 40.0%
!! CTTTGAAGCTTTAGAAGGAG+AGG - chr5.2:26108600-26108619 MS.gene68301:CDS 40.0%
!!! GTTTTAAGAGAGTCAGAGCA+AGG - chr5.2:26109714-26109733 MS.gene68301:CDS 40.0%
!!! TGAGAGTGTTTTGGAACCAT+TGG + chr5.2:26108239-26108258 None:intergenic 40.0%
ATGTGTCCTTGTGCTGGATA+TGG + chr5.2:26108028-26108047 None:intergenic 45.0%
CATTGTGGCAAACACACAAC+AGG + chr5.2:26109894-26109913 None:intergenic 45.0%
CTGTTGTGTGTTTGCCACAA+TGG - chr5.2:26109892-26109911 MS.gene68301:CDS 45.0%
GGAACATCAGGTACAACCAA+AGG + chr5.2:26108457-26108476 None:intergenic 45.0%
GTTACAGACAGCAGCTGAAT+TGG + chr5.2:26108383-26108402 None:intergenic 45.0%
TGTGTCCTTGTGCTGGATAT+GGG + chr5.2:26108027-26108046 None:intergenic 45.0%
TTAGCAACATCAAGTGCCCA+AGG + chr5.2:26108328-26108347 None:intergenic 45.0%
! AGAGATGCTGTTTGTGAAGG+AGG - chr5.2:26110095-26110114 MS.gene68301:CDS 45.0%
! GCTAGAGATGCTGTTTGTGA+AGG - chr5.2:26110092-26110111 MS.gene68301:CDS 45.0%
!! ATTGGTTCGACGGATACGTT+TGG + chr5.2:26108145-26108164 None:intergenic 45.0%
!!! AACTTTTAATATTATAATAA+AGG + chr5.2:26109339-26109358 None:intergenic 5.0%
!!! ACTTTTAATATTATAATAAA+GGG + chr5.2:26109338-26109357 None:intergenic 5.0%
!!! GAAAATAAATTAATTTTATT+TGG - chr5.2:26108814-26108833 MS.gene68301:intron 5.0%
CCGTCGAACCAATCTCTGAT+GGG - chr5.2:26108152-26108171 MS.gene68301:CDS 50.0%
GGACTAATGTGTCCTTGTGC+TGG + chr5.2:26108034-26108053 None:intergenic 50.0%
GGCAATTGATCAGCCCATTG+TGG + chr5.2:26109909-26109928 None:intergenic 50.0%
GTGATCCCATATCCAGCACA+AGG - chr5.2:26108019-26108038 MS.gene68301:CDS 50.0%
TCCGTCGAACCAATCTCTGA+TGG - chr5.2:26108151-26108170 MS.gene68301:CDS 50.0%
TCGTCGAACCCATCAGAGAT+TGG + chr5.2:26108163-26108182 None:intergenic 50.0%
! AGTTGGTGTGAGGCCAAAAG+AGG - chr5.2:26109959-26109978 MS.gene68301:CDS 50.0%
! TTCGACGGATACGTTTGGTG+CGG + chr5.2:26108140-26108159 None:intergenic 50.0%
!! CCCATCAGAGATTGGTTCGA+CGG + chr5.2:26108155-26108174 None:intergenic 50.0%
!! GGATACGTTTGGTGCGGTTA+TGG + chr5.2:26108134-26108153 None:intergenic 50.0%
!! TCTGATGGGTTCGACGAATC+CGG - chr5.2:26108166-26108185 MS.gene68301:CDS 50.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 26107980 26110199 26107980 ID=MS.gene68301
chr5.2 mRNA 26107980 26110199 26107980 ID=MS.gene68301.t1;Parent=MS.gene68301
chr5.2 exon 26109558 26110199 26109558 ID=MS.gene68301.t1.exon1;Parent=MS.gene68301.t1
chr5.2 CDS 26109558 26110199 26109558 ID=cds.MS.gene68301.t1;Parent=MS.gene68301.t1
chr5.2 exon 26108402 26108732 26108402 ID=MS.gene68301.t1.exon2;Parent=MS.gene68301.t1
chr5.2 CDS 26108402 26108732 26108402 ID=cds.MS.gene68301.t1;Parent=MS.gene68301.t1
chr5.2 exon 26107980 26108248 26107980 ID=MS.gene68301.t1.exon3;Parent=MS.gene68301.t1
chr5.2 CDS 26107980 26108248 26107980 ID=cds.MS.gene68301.t1;Parent=MS.gene68301.t1
Gene Sequence

>MS.gene68301

ATGGTGGTAAAGAGTGACAACAACAATGTTCATGTTTTAGTGATCCCATATCCAGCACAAGGACACATTAGTCCACTAATCCAATTCTCAAAACGATTAGTTTCAAAAGGCATCAAAACAACATTTGCAACAACACATTACACTGTTCAATCCATAACCGCACCAAACGTATCCGTCGAACCAATCTCTGATGGGTTCGACGAATCCGGTTTTTCACAAGCTAGCAATGTTGAACTCTTTCTCACTTCATTCAAAACCAATGGTTCCAAAACACTCTCAAACCTCATTCAAAAATACCAAAAAACTTCAACACCAATCACATGCATTGTGTATGATTCTTTTCTACCTTGGGCACTTGATGTTGCTAAACAACATGGGATTTATAGTGCTGCATTTTTCACCAATTCAGCTGCTGTCTGTAACATTTTTTGTCGTATACATCATGGTTTGATCGAAACTCCTGTTGATGAATTGCCTTTGGTTGTACCTGATGTTCCTCCATTGAATTCTAGAGATCTTCCAAGTTTTATAAGATTTCCTGAAAGTTACCCTGCTTATATGGCTATGAAGTTGAGTCAATTCTCTAATTTGAATCAAGCTGATTGGATGTTTGTCAATACCTTTGAAGCTTTAGAAGGAGAGGTATACATTCTTAGCATTTTATTATTCATTTTCCATTCATGACTAAAATATTCACTCGCATAAAATAGTTGAATCAACAAAAATTAATGTATTTGATATTTAGTTAATGTATTTGGGCATCAACTTTTATGAACTAATCTTTCTCTTATAATTAAGAACGAAGAGAATACTCTATATGAGTATATAACATAAGAAAATAAATTAATTTTATTTGGTTTGATTATTTTTTCTCCACAATATTCATGACTATTTATTACTTAGTCTTACATATATACAAAAGTAAAGTCAAATGTATATTACCAAAAAACTGAAATGTGTTTAGTTTACATTGAAACTAAATACATTTGACTTTGAATTTATACTTAAAATGGACCAAGTATTTTATTCTATCTATTTCTATTTCTATATCTACAATAAATAGTTAAAATTTTATTAATTTGAAAACAACAAATAAATAGTCAACTATTAGTGACAACAACTATTGTTTTCTTATTCCAAAAAAAAAAAAATGTTTTCTTAGTTTTTTTCACATCAAGTATTTTATTTTTCTATAAAATCATAATTCATATTTTGTTGAGTTGTGAGATCATGTTCTTTTATTTTATTTTAGTTTTTGATACTACTACAAGCATGCAATGAAATCACATCTTACATGTTTGGGTGTGTTTTTATTTTTTATATATATAGAAAAATGCTAATAAGTATCCTCACAACCCTTTATTATAATATTAAAAGTTGTGACGTTTATGGATAATGTGATTATTAATCCAATTCCCTCTTTTTGATTTTTATTTTTATTTTTTGCTTTTCTATTTGTATTTGAAGGTTGTGAAAGGGTTAACCGAGCTATTTCCTGCTAAATTGATTGGTCCAATGGTTCCTTCTGCTTACTTAGATGGAAGAATCAAAGGAGACAAAGGGTATGGAGCAAATTTATGGAAACCATTAAGTGAAGATTGCATTAATTGGTTAAATGCAAAGCCATCACAATCAGTTGTGTATATCTCCTTTGGAAGCATGGTTTCTTTAACATCAGAACAAATAGAAGAGCTGGCTTTGGGATTAAAAGAAAGTGAAGTGAATTTCTTATGGGTTTTAAGAGAGTCAGAGCAAGGAAAATTACCAAAAGAATACAAAGATTTTATCAAAGAAAAAGGTATAATTGTAACATGGTGTAACCAACTAGAATTATTGGCACATGATGCTGTTGGATGTTTTGTGACACATTGTGGTTGGAATTCGACACTTGAGAGTCTAAGTCTTGGTGTTCCTGTTGTGTGTTTGCCACAATGGGCTGATCAATTGCCAGATGCAAAGTATTTAGAGGAAATTTGGGAAGTTGGTGTGAGGCCAAAAGAGGATGAAAATGGTGTTGTAAAGAGAGAAGAATTTATGTTGAGTTTGAAGGTTGTGATGGAAGGTGAAAGAAGTGAAGTGATTAGAAGAAATGCTAGTGAATGGAAGAAGTTGGCTAGAGATGCTGTTTGTGAAGGAGGTAGCTCTGATAAGAATATTGATGAGTTTGTGGATCATTTGATGAACACAAATAAGAAGGGAAATGATTTGAGTGGTTACTAG
Protein sequence

>MS.gene68301.t1

MVVKSDNNNVHVLVIPYPAQGHISPLIQFSKRLVSKGIKTTFATTHYTVQSITAPNVSVEPISDGFDESGFSQASNVELFLTSFKTNGSKTLSNLIQKYQKTSTPITCIVYDSFLPWALDVAKQHGIYSAAFFTNSAAVCNIFCRIHHGLIETPVDELPLVVPDVPPLNSRDLPSFIRFPESYPAYMAMKLSQFSNLNQADWMFVNTFEALEGEVVKGLTELFPAKLIGPMVPSAYLDGRIKGDKGYGANLWKPLSEDCINWLNAKPSQSVVYISFGSMVSLTSEQIEELALGLKESEVNFLWVLRESEQGKLPKEYKDFIKEKDAKYLEEIWEVGVRPKEDENGVVKREEFMLSLKVVMEGERSEVIRRNASEWKKLARDAVCEGGSSDKNIDEFVDHLMNTNKKGNDLSGY