AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032032

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032032.t1 MTR_3g069710 97.993 299 6 0 1 299 164 462 0.0 603
MS.gene032032.t1 MTR_3g069690 63.455 301 107 2 1 298 159 459 2.89e-139 401
MS.gene032032.t1 MTR_4g064987 46.259 294 151 5 2 293 160 448 6.91e-84 259
MS.gene032032.t1 MTR_4g064987 46.259 294 151 5 2 293 166 454 9.90e-84 259
MS.gene032032.t1 MTR_7g011470 41.472 299 160 5 1 289 173 466 1.72e-77 243
MS.gene032032.t1 MTR_7g011470 42.034 295 156 5 5 289 173 462 6.21e-77 242
MS.gene032032.t1 MTR_6g013450 41.156 294 160 5 5 289 192 481 3.99e-76 240
MS.gene032032.t1 MTR_6g011340 41.333 300 162 6 1 289 184 480 1.84e-75 239
MS.gene032032.t1 MTR_6g013990 41.000 300 161 7 1 289 184 478 1.94e-74 236
MS.gene032032.t1 MTR_6g013900 40.199 301 164 7 1 289 183 479 6.11e-73 232
MS.gene032032.t1 MTR_6g014220 40.789 304 159 7 1 289 181 478 9.29e-73 231
MS.gene032032.t1 MTR_8g059425 37.908 306 176 6 1 295 182 484 1.38e-72 231
MS.gene032032.t1 MTR_5g058320 41.237 291 152 7 11 289 182 465 1.46e-72 231
MS.gene032032.t1 MTR_6g013920 39.249 293 167 5 5 289 190 479 6.34e-72 229
MS.gene032032.t1 MTR_6g014310 37.627 295 173 5 3 289 190 481 1.59e-71 229
MS.gene032032.t1 MTR_6g014050 39.931 288 160 6 11 289 198 481 1.85e-71 228
MS.gene032032.t1 MTR_6g014270 38.870 301 173 5 3 295 188 485 2.47e-71 228
MS.gene032032.t1 MTR_6g014187 39.590 293 160 6 8 289 194 480 2.61e-71 228
MS.gene032032.t1 MTR_6g014040 40.893 291 153 6 11 289 198 481 5.27e-71 227
MS.gene032032.t1 MTR_3g479610 38.796 299 171 4 5 293 21 317 3.77e-70 220
MS.gene032032.t1 MTR_0288s0020 40.541 296 150 7 1 289 185 461 3.99e-70 224
MS.gene032032.t1 MTR_6g014190 37.543 293 172 5 11 295 4 293 3.70e-69 216
MS.gene032032.t1 MTR_3g079480 39.322 295 167 4 5 289 197 489 1.09e-68 221
MS.gene032032.t1 MTR_6g014250 38.312 308 161 8 1 289 181 478 4.07e-68 219
MS.gene032032.t1 MTR_3g479490 38.255 298 166 5 5 289 182 474 4.95e-68 219
MS.gene032032.t1 MTR_6g014200 38.644 295 170 5 3 289 186 477 1.49e-67 218
MS.gene032032.t1 MTR_0891s0010 37.671 292 170 4 8 289 1 290 5.64e-67 211
MS.gene032032.t1 MTR_3g008010 37.829 304 168 6 1 289 181 478 9.67e-67 216
MS.gene032032.t1 MTR_6g014020 38.328 287 166 5 11 289 197 480 1.24e-66 216
MS.gene032032.t1 MTR_3g479520 38.127 299 173 4 5 293 191 487 2.32e-66 215
MS.gene032032.t1 MTR_6g014150 36.877 301 179 4 3 295 186 483 2.79e-66 215
MS.gene032032.t1 MTR_6g013440 39.130 299 163 7 3 289 190 481 8.84e-66 214
MS.gene032032.t1 MTR_4g094220 38.158 304 169 7 1 288 178 478 1.25e-65 213
MS.gene032032.t1 MTR_5g031840 37.748 302 171 6 1 290 167 463 1.70e-65 213
MS.gene032032.t1 MTR_5g031860 38.816 304 167 6 1 290 173 471 1.09e-64 211
MS.gene032032.t1 MTR_6g014240 37.705 305 162 8 1 295 167 453 2.50e-64 209
MS.gene032032.t1 MTR_6g013960 37.874 301 171 7 1 289 184 480 2.72e-64 210
MS.gene032032.t1 MTR_5g031830 38.361 305 168 6 1 290 173 472 6.02e-64 209
MS.gene032032.t1 MTR_0477s0010 37.415 294 148 6 1 289 55 317 1.17e-63 203
MS.gene032032.t1 MTR_6g014290 36.393 305 171 8 1 289 181 478 1.46e-63 208
MS.gene032032.t1 MTR_5g464810 39.932 293 153 9 11 289 195 478 1.94e-63 207
MS.gene032032.t1 MTR_5g064240 39.932 293 153 9 11 289 195 478 1.94e-63 207
MS.gene032032.t1 MTR_6g014170 42.672 232 118 3 68 289 236 462 2.03e-63 207
MS.gene032032.t1 MTR_2g008210 37.884 293 171 6 11 293 190 481 4.14e-62 204
MS.gene032032.t1 MTR_0036s0220 37.847 288 166 7 11 289 195 478 5.11e-62 204
MS.gene032032.t1 MTR_5g464760 39.203 301 150 11 11 291 195 482 4.62e-61 201
MS.gene032032.t1 MTR_8g007585 43.602 211 114 2 79 289 187 392 1.30e-60 198
MS.gene032032.t1 MTR_3g479470 40.070 287 159 4 11 287 195 478 9.02e-60 198
MS.gene032032.t1 MTR_6g014300 37.716 289 165 7 3 289 191 466 7.78e-59 195
MS.gene032032.t1 MTR_8g009055 40.625 288 145 9 10 277 174 455 5.24e-58 193
MS.gene032032.t1 MTR_0184s0040 38.776 294 161 6 10 287 189 479 2.44e-57 192
MS.gene032032.t1 MTR_0078s0190 38.776 294 161 6 10 287 189 479 2.44e-57 192
MS.gene032032.t1 MTR_1g107380 36.519 293 171 6 8 289 185 473 2.89e-55 186
MS.gene032032.t1 MTR_8g043470 33.220 295 164 4 3 295 121 384 7.39e-55 182
MS.gene032032.t1 MTR_1g107350 39.273 275 152 7 26 288 197 468 9.14e-55 185
MS.gene032032.t1 MTR_4g094920 37.667 300 172 5 8 294 188 485 2.55e-54 184
MS.gene032032.t1 MTR_6g488280 38.776 294 152 7 10 284 176 460 9.00e-54 182
MS.gene032032.t1 MTR_0428s0010 38.776 294 152 7 10 284 176 460 9.00e-54 182
MS.gene032032.t1 MTR_6g023665 39.456 294 150 8 10 284 183 467 1.13e-53 182
MS.gene032032.t1 MTR_1g107360 39.033 269 145 6 30 288 202 461 1.82e-53 181
MS.gene032032.t1 MTR_6g005600 39.145 304 159 7 10 293 175 472 2.91e-53 181
MS.gene032032.t1 MTR_8g009067 36.860 293 163 7 10 285 56 343 3.26e-53 177
MS.gene032032.t1 MTR_8g008990 38.542 288 153 7 10 277 174 457 5.32e-53 180
MS.gene032032.t1 MTR_8g009050 37.201 293 162 5 10 284 174 462 5.80e-53 180
MS.gene032032.t1 MTR_8g009063 38.225 293 159 6 10 284 181 469 6.70e-53 180
MS.gene032032.t1 MTR_1g107375 35.739 291 158 6 18 288 172 453 1.20e-52 179
MS.gene032032.t1 MTR_8g009073 37.884 293 158 8 10 284 45 331 2.54e-52 175
MS.gene032032.t1 MTR_8g006710 37.919 298 158 8 10 288 176 465 3.67e-52 177
MS.gene032032.t1 MTR_8g009067 36.860 293 163 7 10 285 174 461 4.95e-52 177
MS.gene032032.t1 MTR_4g095008 36.486 296 171 6 8 289 173 465 1.23e-51 178
MS.gene032032.t1 MTR_8g009073 37.884 293 158 8 10 284 174 460 6.15e-51 174
MS.gene032032.t1 MTR_1g019510 38.014 292 158 5 10 284 174 459 8.50e-51 174
MS.gene032032.t1 MTR_7g047030 35.135 296 172 6 10 288 174 466 9.71e-51 174
MS.gene032032.t1 MTR_7g047270 35.135 296 172 6 10 288 174 466 9.71e-51 174
MS.gene032032.t1 MTR_8g027885 40.925 281 142 8 14 277 188 461 9.79e-51 174
MS.gene032032.t1 MTR_0184s0030 38.732 284 154 7 10 277 177 456 9.88e-51 174
MS.gene032032.t1 MTR_8g012650 36.774 310 158 10 10 291 175 474 1.20e-50 174
MS.gene032032.t1 MTR_6g033725 39.384 292 151 9 8 284 177 457 1.21e-50 174
MS.gene032032.t1 MTR_8g077590 38.644 295 152 9 10 284 177 462 1.42e-50 174
MS.gene032032.t1 MTR_8g006270 37.417 302 155 11 10 287 171 462 2.69e-50 173
MS.gene032032.t1 MTR_8g027870 40.426 282 142 9 14 277 188 461 3.31e-50 172
MS.gene032032.t1 MTR_7g046490 37.627 295 157 9 11 286 175 461 4.40e-50 172
MS.gene032032.t1 MTR_1g107365 36.742 264 147 5 35 288 238 491 5.20e-50 172
MS.gene032032.t1 MTR_0078s0010 35.473 296 171 7 10 288 174 466 5.85e-50 172
MS.gene032032.t1 MTR_8g083290 37.584 298 156 7 14 285 171 464 9.69e-50 171
MS.gene032032.t1 MTR_8g066610 36.000 300 168 5 8 291 189 480 2.82e-49 171
MS.gene032032.t1 MTR_8g006730 36.054 294 161 8 10 284 177 462 3.69e-49 170
MS.gene032032.t1 MTR_4g485630 35.314 303 169 6 8 290 180 475 5.49e-49 169
MS.gene032032.t1 MTR_3g049970 36.471 255 151 5 44 288 216 469 5.70e-49 169
MS.gene032032.t1 MTR_5g098930 35.987 314 164 8 7 290 163 469 7.48e-49 169
MS.gene032032.t1 MTR_1g107315 38.824 255 145 5 44 288 215 468 1.33e-48 169
MS.gene032032.t1 MTR_0078s0060 35.811 296 169 7 10 288 174 465 1.49e-48 168
MS.gene032032.t1 MTR_2086s0010 40.449 178 105 1 117 294 1 177 1.79e-48 160
MS.gene032032.t1 MTR_1996s0010 40.449 178 105 1 117 294 1 177 1.79e-48 160
MS.gene032032.t1 MTR_7g117170 36.727 275 152 5 28 284 201 471 3.63e-48 167
MS.gene032032.t1 MTR_8g064870 37.313 268 153 7 35 288 207 473 5.62e-48 167
MS.gene032032.t1 MTR_6g033625 37.037 297 157 8 10 284 172 460 1.39e-47 166
MS.gene032032.t1 MTR_6g033675 35.473 296 174 6 1 284 170 460 1.46e-47 166
MS.gene032032.t1 MTR_5g016480 35.548 301 166 9 8 289 180 471 1.51e-47 166
MS.gene032032.t1 MTR_7g013180 41.350 237 120 7 47 279 217 438 1.88e-47 165
MS.gene032032.t1 MTR_6g038240 38.127 299 156 10 8 289 169 455 2.09e-47 165
MS.gene032032.t1 MTR_1g107285 36.630 273 150 6 29 288 201 463 3.13e-47 165
MS.gene032032.t1 MTR_8g006260 35.789 285 153 7 15 277 182 458 3.87e-47 164
MS.gene032032.t1 MTR_8g012635 37.113 291 155 9 10 277 175 460 4.10e-47 164
MS.gene032032.t1 MTR_1g032490 35.714 294 176 7 11 292 182 474 4.86e-47 164
MS.gene032032.t1 MTR_7g013240 39.912 228 122 6 63 286 221 437 6.96e-47 163
MS.gene032032.t1 MTR_8g012745 37.075 294 148 9 10 277 175 457 9.61e-47 164
MS.gene032032.t1 MTR_7g070610 36.364 286 148 6 39 296 215 494 1.18e-46 164
MS.gene032032.t1 MTR_8g008970 35.616 292 166 7 10 284 174 460 1.34e-46 167
MS.gene032032.t1 MTR_8g008970 36.226 265 152 5 28 285 531 785 3.89e-40 149
MS.gene032032.t1 MTR_4g031800 33.127 323 184 9 2 296 162 480 1.47e-46 163
MS.gene032032.t1 MTR_8g088560 34.868 304 173 8 1 288 163 457 2.23e-46 162
MS.gene032032.t1 MTR_3g009510 37.288 295 153 8 17 285 185 473 2.25e-46 162
MS.gene032032.t1 MTR_6g033615 35.354 297 164 9 5 284 161 446 2.64e-46 162
MS.gene032032.t1 MTR_5g090670 36.893 309 156 9 10 289 179 477 2.81e-46 162
MS.gene032032.t1 MTR_6g013680 33.445 299 128 9 3 289 136 375 3.38e-46 160
MS.gene032032.t1 MTR_8g083280 39.921 253 134 5 44 289 221 462 6.38e-46 161
MS.gene032032.t1 MTR_6g033660 36.803 269 146 6 32 284 199 459 6.87e-46 161
MS.gene032032.t1 MTR_8g064880 36.610 295 168 9 11 288 183 475 8.74e-46 161
MS.gene032032.t1 MTR_8g465670 35.430 302 155 10 11 285 179 467 9.69e-46 161
MS.gene032032.t1 MTR_5g072810 32.343 303 181 5 1 290 164 455 9.77e-46 160
MS.gene032032.t1 MTR_6g038200 36.949 295 163 9 8 288 169 454 1.59e-45 160
MS.gene032032.t1 MTR_7g013260 39.035 228 124 6 63 286 222 438 2.90e-45 159
MS.gene032032.t1 MTR_8g012630 43.564 202 96 4 94 277 203 404 4.07e-45 158
MS.gene032032.t1 MTR_6g038230 38.000 300 153 10 8 288 169 454 6.63e-45 158
MS.gene032032.t1 MTR_7g071040 35.738 305 158 8 22 296 202 498 7.20e-45 159
MS.gene032032.t1 MTR_5g004940 37.736 212 115 2 90 297 192 390 1.02e-44 156
MS.gene032032.t1 MTR_1g019520 43.689 206 101 4 94 284 3 208 1.05e-44 151
MS.gene032032.t1 MTR_7g070660 35.842 279 150 6 39 294 213 485 1.06e-44 158
MS.gene032032.t1 MTR_4g117980 33.866 313 173 9 13 294 178 487 2.25e-44 157
MS.gene032032.t1 MTR_5g090660 35.354 297 150 7 39 299 204 494 2.59e-44 159
MS.gene032032.t1 MTR_4g128690 32.069 290 183 5 3 290 177 454 3.70e-44 156
MS.gene032032.t1 MTR_5g090580 35.880 301 147 8 21 290 191 476 4.09e-44 156
MS.gene032032.t1 MTR_4g024020 32.746 284 161 7 41 298 218 497 6.65e-44 156
MS.gene032032.t1 MTR_7g102560 34.909 275 151 8 41 289 212 484 9.20e-44 156
MS.gene032032.t1 MTR_7g012120 35.430 302 170 9 16 292 186 487 9.90e-44 155
MS.gene032032.t1 MTR_7g080950 31.250 304 178 7 8 293 162 452 1.20e-43 155
MS.gene032032.t1 MTR_5g035560 34.211 304 172 8 4 290 161 453 1.36e-43 155
MS.gene032032.t1 MTR_5g035580 34.564 298 167 8 5 285 164 450 1.54e-43 155
MS.gene032032.t1 MTR_7g013220 37.295 244 133 6 47 286 221 448 1.74e-43 154
MS.gene032032.t1 MTR_6g038300 34.237 295 172 7 8 288 169 455 1.81e-43 154
MS.gene032032.t1 MTR_5g019580 36.042 283 147 6 27 281 195 471 2.20e-43 155
MS.gene032032.t1 MTR_5g090700 34.516 310 160 8 11 290 182 478 2.71e-43 154
MS.gene032032.t1 MTR_7g070740 34.505 313 176 8 7 296 185 491 3.25e-43 154
MS.gene032032.t1 MTR_5g019580 37.453 267 133 6 43 281 235 495 3.82e-43 154
MS.gene032032.t1 MTR_3g084520 38.868 265 139 8 44 288 211 472 3.96e-43 154
MS.gene032032.t1 MTR_7g070940 35.662 272 153 6 40 294 212 478 5.02e-43 154
MS.gene032032.t1 MTR_7g070800 33.871 310 171 7 7 292 180 479 5.80e-43 154
MS.gene032032.t1 MTR_5g072860 33.219 292 169 7 11 289 188 466 6.25e-43 153
MS.gene032032.t1 MTR_7g070780 32.177 317 178 8 7 296 185 491 6.70e-43 154
MS.gene032032.t1 MTR_5g067170 35.117 299 169 8 21 294 187 485 7.13e-43 153
MS.gene032032.t1 MTR_7g013200 37.959 245 130 6 47 286 210 437 7.37e-43 152
MS.gene032032.t1 MTR_5g090630 35.836 293 154 7 22 289 183 466 7.75e-43 153
MS.gene032032.t1 MTR_7g070860 33.224 304 167 6 7 292 181 466 1.01e-42 153
MS.gene032032.t1 MTR_6g038220 35.932 295 166 8 8 288 168 453 1.21e-42 152
MS.gene032032.t1 MTR_7g070810 35.252 278 149 6 40 294 212 481 1.60e-42 152
MS.gene032032.t1 MTR_5g072840 33.445 299 176 6 3 290 164 450 2.70e-42 151
MS.gene032032.t1 MTR_5g066390 41.509 159 91 1 131 289 59 215 2.89e-42 145
MS.gene032032.t1 MTR_4g008630 33.446 296 178 7 9 288 170 462 3.49e-42 151
MS.gene032032.t1 MTR_4g485620 36.431 269 147 6 40 291 196 457 3.72e-42 151
MS.gene032032.t1 MTR_1g029540 32.653 294 173 7 13 288 173 459 5.75e-42 150
MS.gene032032.t1 MTR_4g108250 33.684 285 155 6 40 296 217 495 6.32e-42 151
MS.gene032032.t1 MTR_6g014185 34.470 264 130 7 36 291 119 347 7.01e-42 148
MS.gene032032.t1 MTR_4g117960 32.781 302 177 9 21 296 187 488 9.17e-42 150
MS.gene032032.t1 MTR_5g090620 33.742 326 168 10 1 290 164 477 9.73e-42 150
MS.gene032032.t1 MTR_5g045960 34.875 281 151 9 41 294 216 491 1.55e-41 150
MS.gene032032.t1 MTR_8g012730 34.602 289 141 8 6 276 38 296 2.01e-41 145
MS.gene032032.t1 MTR_4g117890 34.564 298 167 9 24 294 184 480 2.37e-41 149
MS.gene032032.t1 MTR_5g045970 31.818 308 181 8 11 292 192 496 3.33e-41 149
MS.gene032032.t1 MTR_6g014186 30.333 300 157 8 1 289 181 439 4.24e-41 148
MS.gene032032.t1 MTR_7g080940 32.890 301 173 9 8 291 167 455 4.79e-41 148
MS.gene032032.t1 MTR_7g102490 33.091 275 154 7 41 289 217 487 5.28e-41 149
MS.gene032032.t1 MTR_6g014160 32.362 309 120 9 1 295 166 399 6.17e-41 146
MS.gene032032.t1 MTR_8g090095 31.507 292 181 6 13 288 191 479 6.43e-41 148
MS.gene032032.t1 MTR_8g032950 34.091 308 168 9 19 297 185 486 6.63e-41 148
MS.gene032032.t1 MTR_3g084540 35.065 308 162 10 11 288 174 473 6.77e-41 148
MS.gene032032.t1 MTR_3g084530 37.079 267 141 7 44 288 211 472 8.55e-41 147
MS.gene032032.t1 MTR_5g072830 31.773 299 181 6 3 290 164 450 9.68e-41 147
MS.gene032032.t1 MTR_5g090600 34.354 294 144 8 21 290 187 455 1.80e-40 146
MS.gene032032.t1 MTR_1g062380 32.258 279 162 6 39 292 221 497 1.81e-40 147
MS.gene032032.t1 MTR_7g080935 32.997 297 178 8 8 291 167 455 2.57e-40 146
MS.gene032032.t1 MTR_7g102460 33.212 274 154 7 41 289 216 485 2.84e-40 147
MS.gene032032.t1 MTR_6g035265 32.381 315 184 10 7 292 163 477 3.42e-40 146
MS.gene032032.t1 MTR_7g102450 36.071 280 151 8 40 294 201 477 3.57e-40 146
MS.gene032032.t1 MTR_8g074550 33.003 303 157 8 28 290 193 489 3.91e-40 146
MS.gene032032.t1 MTR_5g072820 31.544 298 183 4 3 290 164 450 4.39e-40 145
MS.gene032032.t1 MTR_7g055710 34.058 276 149 6 39 287 213 482 4.46e-40 146
MS.gene032032.t1 MTR_4g128720 30.526 285 184 5 8 290 185 457 5.56e-40 145
MS.gene032032.t1 MTR_2g035040 32.323 297 176 7 22 293 95 391 7.15e-40 144
MS.gene032032.t1 MTR_5g090610 34.247 292 158 8 22 288 178 460 8.02e-40 145
MS.gene032032.t1 MTR_7g117405 33.577 274 159 6 36 289 211 481 9.61e-40 145
MS.gene032032.t1 MTR_8g006220 34.405 311 155 12 11 285 178 475 1.21e-39 145
MS.gene032032.t1 MTR_5g070090 36.957 276 146 9 26 288 201 461 1.27e-39 144
MS.gene032032.t1 MTR_5g075440 32.567 261 158 4 40 291 207 458 1.44e-39 144
MS.gene032032.t1 MTR_2g046820 35.430 302 164 10 8 288 171 462 1.77e-39 144
MS.gene032032.t1 MTR_4g485640 32.698 315 179 10 1 285 352 663 6.35e-39 145
MS.gene032032.t1 MTR_0536s0020 32.890 301 174 10 24 297 189 488 6.62e-39 143
MS.gene032032.t1 MTR_2g035020 33.220 295 166 9 22 288 190 481 9.14e-39 142
MS.gene032032.t1 MTR_2g034990 32.781 302 166 9 22 292 190 485 1.41e-38 142
MS.gene032032.t1 MTR_7g070930 33.566 286 154 7 36 292 213 491 1.51e-38 142
MS.gene032032.t1 MTR_2g046750 35.762 302 158 10 10 288 177 465 1.82e-38 141
MS.gene032032.t1 MTR_3g031450 30.492 305 176 8 11 295 174 462 1.83e-38 141
MS.gene032032.t1 MTR_2g040530 33.225 307 163 9 10 288 172 464 3.50e-38 140
MS.gene032032.t1 MTR_7g070910 33.910 289 153 8 38 296 212 492 3.87e-38 141
MS.gene032032.t1 MTR_3g031400 32.432 259 154 4 40 289 204 450 4.24e-38 140
MS.gene032032.t1 MTR_5g098960 32.526 289 177 7 5 288 171 446 4.48e-38 140
MS.gene032032.t1 MTR_5g087620 35.897 273 154 8 40 291 224 496 5.39e-38 140
MS.gene032032.t1 MTR_5g029800 34.122 296 164 10 21 288 185 477 9.68e-38 139
MS.gene032032.t1 MTR_6g035185 32.550 298 167 10 21 288 189 482 7.71e-37 137
MS.gene032032.t1 MTR_5g070040 36.201 279 147 8 25 286 200 464 9.62e-37 137
MS.gene032032.t1 MTR_5g040030 31.399 293 178 6 22 292 200 491 2.30e-36 136
MS.gene032032.t1 MTR_7g080900 31.879 298 180 10 8 291 170 458 4.06e-36 135
MS.gene032032.t1 MTR_8g044140 31.987 297 171 6 22 292 161 452 8.74e-36 134
MS.gene032032.t1 MTR_7g102550 30.892 314 186 9 4 289 176 486 9.26e-36 134
MS.gene032032.t1 MTR_7g470610 36.667 210 114 4 39 235 70 273 3.00e-34 126
MS.gene032032.t1 MTR_7g070583 36.667 210 114 4 39 235 70 273 3.00e-34 126
MS.gene032032.t1 MTR_2g098430 32.990 291 164 12 15 286 199 477 1.72e-33 128
MS.gene032032.t1 MTR_4g118000 30.693 303 181 9 13 288 166 466 2.73e-33 127
MS.gene032032.t1 MTR_4g117950 31.802 283 159 8 40 294 192 468 3.29e-33 127
MS.gene032032.t1 MTR_4g485590 34.956 226 138 4 15 234 162 384 4.79e-33 125
MS.gene032032.t1 MTR_2g059240 34.155 284 168 9 17 289 194 469 9.45e-33 125
MS.gene032032.t1 MTR_5g039900 28.912 294 182 6 22 292 198 487 1.03e-32 126
MS.gene032032.t1 MTR_7g070870 32.584 267 147 7 40 294 219 464 1.19e-32 125
MS.gene032032.t1 MTR_1g040310 30.822 292 178 7 22 292 199 487 1.28e-32 125
MS.gene032032.t1 MTR_5g016660 29.492 295 182 6 22 292 195 487 3.24e-32 124
MS.gene032032.t1 MTR_6g013435 27.119 295 161 6 3 289 59 307 5.85e-32 120
MS.gene032032.t1 MTR_7g071050 40.526 190 86 5 95 263 231 414 9.37e-32 122
MS.gene032032.t1 MTR_7g102520 33.106 293 161 10 33 296 210 496 1.19e-31 123
MS.gene032032.t1 MTR_8g009840 40.104 192 93 5 112 284 333 521 1.65e-31 123
MS.gene032032.t1 MTR_0536s0010 30.795 302 181 10 18 294 184 482 2.35e-31 122
MS.gene032032.t1 MTR_8g068330 32.927 246 151 5 51 288 225 464 7.00e-31 120
MS.gene032032.t1 MTR_6g035295 28.283 297 192 5 16 292 193 488 2.77e-30 119
MS.gene032032.t1 MTR_4g082810 34.862 218 131 4 10 219 179 393 5.57e-30 117
MS.gene032032.t1 MTR_7g039550 29.412 272 171 5 48 299 2 272 8.65e-30 114
MS.gene032032.t1 MTR_5g027210 30.916 262 147 9 35 266 204 461 2.15e-29 117
MS.gene032032.t1 MTR_3g009490 40.217 184 92 4 120 285 2 185 2.16e-29 110
MS.gene032032.t1 MTR_4g082820 32.130 277 169 9 10 275 174 442 2.25e-29 116
MS.gene032032.t1 MTR_8g068340 32.171 258 165 4 33 284 211 464 3.01e-29 116
MS.gene032032.t1 MTR_5g072850 32.937 252 142 6 40 289 156 382 4.09e-29 114
MS.gene032032.t1 MTR_6g014000 36.986 146 92 0 151 296 18 163 4.25e-29 116
MS.gene032032.t1 MTR_8g068360 36.139 202 116 5 97 291 271 466 5.36e-29 115
MS.gene032032.t1 MTR_7g070760 33.051 236 117 6 8 234 1 204 7.85e-28 107
MS.gene032032.t1 MTR_8g466240 32.197 264 159 7 43 293 202 458 1.17e-27 111
MS.gene032032.t1 MTR_1g107325 39.726 146 73 3 149 288 216 352 1.33e-27 110
MS.gene032032.t1 MTR_4g059370 33.077 260 149 9 16 259 113 363 2.10e-27 110
MS.gene032032.t1 MTR_8g007565 32.520 246 138 8 33 261 204 438 2.66e-27 110
MS.gene032032.t1 MTR_6g013890 29.457 258 115 9 5 253 40 239 3.54e-27 107
MS.gene032032.t1 MTR_5g066410 32.917 240 141 7 33 257 176 410 4.59e-27 110
MS.gene032032.t1 MTR_8g007650 32.520 246 138 8 33 261 204 438 5.31e-27 110
MS.gene032032.t1 MTR_7g067120 35.749 207 114 7 93 292 239 433 8.54e-27 108
MS.gene032032.t1 MTR_7g067330 37.059 170 92 5 93 257 239 398 9.53e-27 108
MS.gene032032.t1 MTR_8g071070 29.866 298 184 10 9 291 184 471 1.32e-26 108
MS.gene032032.t1 MTR_0009s0240 32.184 261 161 9 40 291 208 461 4.90e-26 107
MS.gene032032.t1 MTR_4g123553 31.839 223 140 5 48 263 219 436 6.41e-26 107
MS.gene032032.t1 MTR_7g070995 40.816 147 72 3 165 296 6 152 8.64e-26 100
MS.gene032032.t1 MTR_6g078320 29.392 296 177 10 3 276 182 467 1.05e-25 106
MS.gene032032.t1 MTR_2g008226 32.301 226 135 7 50 266 232 448 2.05e-25 105
MS.gene032032.t1 MTR_7g080960 31.188 202 91 3 94 295 324 477 4.21e-24 102
MS.gene032032.t1 MTR_0536s0030 38.608 158 80 4 154 294 200 357 1.84e-23 99.0
MS.gene032032.t1 MTR_1g090270 30.041 243 149 9 28 259 204 436 2.05e-23 99.8
MS.gene032032.t1 MTR_5g090690 33.186 226 121 9 68 281 166 373 2.15e-23 99.0
MS.gene032032.t1 MTR_4g079270 30.645 248 159 8 46 288 215 454 8.45e-23 98.2
MS.gene032032.t1 MTR_6g042310 29.956 227 147 5 44 263 218 439 9.22e-23 98.2
MS.gene032032.t1 MTR_2g046620 29.565 230 144 6 44 263 216 437 1.03e-22 97.8
MS.gene032032.t1 MTR_2g014900 28.682 258 168 6 43 294 211 458 1.16e-22 97.8
MS.gene032032.t1 MTR_2g008225 30.000 230 143 6 44 263 220 441 2.20e-22 97.1
MS.gene032032.t1 MTR_2g008220 31.140 228 135 6 48 263 223 440 3.19e-22 96.7
MS.gene032032.t1 MTR_4g077960 29.825 228 142 6 48 265 196 415 5.67e-22 95.5
MS.gene032032.t1 MTR_4g079250 29.880 251 157 8 46 288 215 454 1.32e-21 94.7
MS.gene032032.t1 MTR_8g056740 29.098 244 162 6 24 260 93 332 1.46e-21 94.0
MS.gene032032.t1 MTR_3g435310 31.638 177 104 5 96 263 227 395 3.25e-21 93.2
MS.gene032032.t1 MTR_6g036650 29.204 226 142 6 48 263 229 446 1.70e-19 88.6
MS.gene032032.t1 MTR_2g083480 33.990 203 126 6 95 291 257 457 1.72e-18 85.5
MS.gene032032.t1 MTR_1g090280 31.183 186 113 7 117 291 133 314 2.44e-18 84.0
MS.gene032032.t1 MTR_2g083380 29.771 262 159 8 41 291 227 474 1.93e-16 79.7
MS.gene032032.t1 MTR_2g083430 33.889 180 107 6 96 265 258 435 6.41e-16 78.2
MS.gene032032.t1 MTR_2g083490 29.796 245 147 8 33 266 202 432 1.52e-14 73.9
MS.gene032032.t1 MTR_0475s0030 43.750 64 36 0 181 244 11 74 2.37e-14 68.2
MS.gene032032.t1 MTR_2g009740 44.048 84 41 2 94 177 201 278 1.25e-13 70.5
MS.gene032032.t1 MTR_6g052375 29.310 174 104 4 8 174 31 192 7.71e-13 68.2
MS.gene032032.t1 MTR_2g083390 25.969 258 154 8 39 291 208 433 1.14e-12 68.2
MS.gene032032.t1 MTR_2g083420 27.053 207 111 7 95 291 257 433 5.58e-12 66.2
MS.gene032032.t1 MTR_8g028755 29.167 168 84 5 91 257 97 230 8.63e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032032.t1 AT3G55700 56.803 294 121 3 1 293 167 455 1.23e-118 348
MS.gene032032.t1 AT3G55710 56.229 297 126 3 1 294 165 460 6.86e-116 342
MS.gene032032.t1 AT3G11340 56.207 290 125 1 2 291 160 447 1.02e-110 328
MS.gene032032.t1 AT5G05880 50.512 293 137 3 2 291 164 451 1.60e-103 310
MS.gene032032.t1 AT5G05870 50.685 292 135 3 2 288 167 454 3.79e-102 306
MS.gene032032.t1 AT5G05890 50.000 290 143 1 2 291 168 455 2.54e-101 304
MS.gene032032.t1 AT5G05860 50.690 290 141 1 2 291 163 450 1.84e-99 299
MS.gene032032.t1 AT5G59580 50.890 281 134 2 8 288 171 447 8.99e-99 298
MS.gene032032.t1 AT3G46680 48.772 285 142 2 2 286 167 447 5.47e-97 293
MS.gene032032.t1 AT5G59590 49.466 281 138 2 8 288 173 449 1.36e-96 292
MS.gene032032.t1 AT3G46700 48.252 286 145 2 3 288 162 444 1.41e-96 292
MS.gene032032.t1 AT3G46670 48.443 289 145 2 3 291 167 451 6.46e-94 285
MS.gene032032.t1 AT5G05900 50.865 289 130 5 2 288 169 447 4.81e-92 280
MS.gene032032.t1 AT3G46690 49.296 284 141 2 2 285 166 446 1.17e-91 280
MS.gene032032.t1 AT3G46660 48.797 291 144 3 2 291 172 458 4.82e-90 275
MS.gene032032.t1 AT3G46720 50.709 282 128 3 4 285 167 437 1.62e-89 274
MS.gene032032.t1 AT3G46650 46.207 290 152 2 2 291 150 435 2.32e-89 273
MS.gene032032.t1 AT5G38010 50.173 289 136 4 2 288 171 453 6.02e-87 267
MS.gene032032.t1 AT2G26480 43.448 290 161 3 1 289 159 446 1.86e-82 256
MS.gene032032.t1 AT5G38040 47.945 292 136 6 3 288 168 449 4.58e-82 255
MS.gene032032.t1 AT1G22360 38.488 291 163 7 11 289 192 478 2.11e-67 218
MS.gene032032.t1 AT1G22380 39.384 292 159 7 11 289 195 481 1.00e-66 216
MS.gene032032.t1 AT1G22400 37.908 306 168 8 1 289 182 482 1.38e-65 213
MS.gene032032.t1 AT1G22340 37.586 290 168 6 11 289 195 482 4.75e-62 204
MS.gene032032.t1 AT1G22360 36.770 291 156 8 11 289 192 466 1.19e-59 197
MS.gene032032.t1 AT1G78270 35.294 306 179 7 5 296 188 488 4.01e-58 194
MS.gene032032.t1 AT1G22370 37.943 282 160 5 11 280 20 298 2.08e-56 184
MS.gene032032.t1 AT5G37950 49.758 207 96 4 2 206 137 337 7.00e-56 184
MS.gene032032.t1 AT5G37950 49.758 207 96 4 2 206 143 343 1.01e-55 184
MS.gene032032.t1 AT2G43820 37.134 307 166 8 1 290 152 448 1.61e-54 183
MS.gene032032.t1 AT1G22370 37.586 290 167 5 11 289 190 476 2.32e-54 184
MS.gene032032.t1 AT5G26310 36.184 304 161 7 10 287 170 466 4.42e-53 180
MS.gene032032.t1 AT2G31750 34.899 298 170 7 8 289 166 455 8.50e-53 179
MS.gene032032.t1 AT1G05680 37.543 293 161 6 8 286 166 450 1.14e-52 179
MS.gene032032.t1 AT2G31750 34.899 298 170 7 8 289 166 455 1.98e-52 179
MS.gene032032.t1 AT4G01070 38.305 295 158 9 10 286 176 464 3.17e-52 178
MS.gene032032.t1 AT2G31790 36.000 300 159 7 8 286 167 454 7.54e-52 177
MS.gene032032.t1 AT1G05675 35.690 297 161 6 8 286 166 450 6.84e-51 174
MS.gene032032.t1 AT2G43840 35.880 301 166 9 5 288 156 446 7.86e-51 174
MS.gene032032.t1 AT5G17040 33.221 298 183 7 1 291 52 340 8.97e-51 171
MS.gene032032.t1 AT2G43840 36.184 304 161 10 5 288 156 446 1.46e-50 173
MS.gene032032.t1 AT3G50740 37.755 294 137 9 27 287 192 472 2.10e-50 173
MS.gene032032.t1 AT2G36970 36.502 263 159 5 28 288 214 470 2.65e-50 173
MS.gene032032.t1 AT2G23260 36.610 295 166 6 8 288 166 453 3.99e-50 172
MS.gene032032.t1 AT5G17050 33.893 298 179 7 1 291 173 459 9.21e-50 171
MS.gene032032.t1 AT5G17040 32.990 291 182 6 5 291 161 442 9.90e-50 171
MS.gene032032.t1 AT5G66690 38.267 277 137 9 25 275 185 453 1.25e-49 171
MS.gene032032.t1 AT4G15500 36.264 273 157 5 35 296 204 470 2.61e-49 170
MS.gene032032.t1 AT3G21560 33.670 297 179 6 5 288 181 472 4.53e-49 170
MS.gene032032.t1 AT5G17030 34.783 253 156 4 40 291 214 458 5.00e-49 169
MS.gene032032.t1 AT1G01420 36.842 285 151 9 20 284 187 462 8.50e-49 169
MS.gene032032.t1 AT3G16520 36.177 293 166 9 5 285 173 456 8.59e-49 169
MS.gene032032.t1 AT1G01420 36.842 285 151 9 20 284 190 465 9.36e-49 169
MS.gene032032.t1 AT4G15490 36.213 301 163 11 8 287 177 469 1.22e-48 169
MS.gene032032.t1 AT2G23250 35.517 290 171 6 8 288 153 435 1.08e-47 165
MS.gene032032.t1 AT2G30140 34.551 301 167 6 2 288 167 451 8.31e-47 163
MS.gene032032.t1 AT2G30140 34.551 301 167 6 2 288 166 450 8.42e-47 163
MS.gene032032.t1 AT4G15550 37.162 296 160 9 8 287 187 472 1.01e-46 163
MS.gene032032.t1 AT2G36780 38.603 272 145 8 41 291 221 491 1.62e-46 163
MS.gene032032.t1 AT1G01390 39.333 300 148 13 10 285 176 465 2.80e-46 162
MS.gene032032.t1 AT1G05530 35.216 301 173 7 7 289 159 455 3.71e-46 161
MS.gene032032.t1 AT1G01390 39.333 300 148 13 10 285 193 482 4.23e-46 162
MS.gene032032.t1 AT1G05560 35.570 298 171 6 7 288 159 451 4.64e-46 162
MS.gene032032.t1 AT2G36760 37.324 284 154 8 35 296 215 496 4.71e-46 162
MS.gene032032.t1 AT1G05560 35.570 298 171 6 7 288 209 501 9.29e-46 162
MS.gene032032.t1 AT1G30530 34.219 301 174 8 1 291 167 453 1.75e-45 160
MS.gene032032.t1 AT3G16520 35.943 281 159 9 5 273 173 444 1.86e-45 159
MS.gene032032.t1 AT3G16520 35.943 281 159 9 5 273 173 444 2.12e-45 159
MS.gene032032.t1 AT2G36770 37.722 281 149 9 34 289 210 489 2.26e-45 160
MS.gene032032.t1 AT2G36750 37.956 274 148 8 41 293 216 488 2.62e-45 160
MS.gene032032.t1 AT3G21760 35.621 306 159 10 10 288 186 480 2.12e-44 157
MS.gene032032.t1 AT4G15480 33.452 281 174 5 8 277 189 467 2.23e-44 157
MS.gene032032.t1 AT4G36770 33.453 278 151 6 20 271 177 446 3.64e-44 156
MS.gene032032.t1 AT2G30150 31.457 302 176 7 1 288 152 436 4.11e-44 156
MS.gene032032.t1 AT2G28080 31.295 278 174 7 20 288 206 475 5.51e-44 156
MS.gene032032.t1 AT2G30150 31.148 305 179 7 1 291 168 455 7.12e-44 155
MS.gene032032.t1 AT4G15280 35.738 305 160 11 10 289 181 474 1.33e-43 155
MS.gene032032.t1 AT3G53160 35.714 280 154 10 33 289 207 483 1.92e-43 155
MS.gene032032.t1 AT4G15280 35.738 305 160 11 10 289 213 506 2.32e-43 155
MS.gene032032.t1 AT4G15260 33.224 304 168 7 10 289 63 355 3.07e-43 152
MS.gene032032.t1 AT4G34131 35.018 277 157 7 33 290 209 481 7.23e-43 153
MS.gene032032.t1 AT2G15490 34.831 267 151 6 41 288 218 480 1.01e-42 153
MS.gene032032.t1 AT2G15490 34.848 264 152 6 41 288 218 477 2.19e-42 152
MS.gene032032.t1 AT2G36800 34.643 280 159 8 34 291 213 490 5.03e-42 151
MS.gene032032.t1 AT2G15480 33.091 275 162 6 33 288 209 480 9.34e-42 150
MS.gene032032.t1 AT3G21790 35.461 282 148 7 34 288 204 478 1.71e-41 150
MS.gene032032.t1 AT3G21800 35.759 316 163 10 3 288 170 475 3.19e-41 149
MS.gene032032.t1 AT3G21780 35.526 304 160 9 10 288 176 468 3.38e-41 149
MS.gene032032.t1 AT2G36790 34.576 295 169 7 24 296 203 495 4.15e-41 149
MS.gene032032.t1 AT1G07250 34.343 297 173 8 10 294 192 478 3.36e-40 146
MS.gene032032.t1 AT1G24100 33.333 303 174 8 5 288 165 458 6.43e-40 145
MS.gene032032.t1 AT2G18560 34.211 266 147 8 37 281 111 369 1.83e-39 142
MS.gene032032.t1 AT2G15480 31.930 285 162 7 33 288 209 490 2.02e-39 144
MS.gene032032.t1 AT3G22250 33.571 280 155 8 9 267 171 440 3.36e-39 143
MS.gene032032.t1 AT4G14090 34.130 293 169 9 8 287 173 454 3.71e-39 143
MS.gene032032.t1 AT1G07260 35.374 294 161 10 10 285 190 472 3.87e-39 143
MS.gene032032.t1 AT4G34138 32.967 273 161 7 36 292 216 482 4.63e-39 143
MS.gene032032.t1 AT3G02100 33.582 268 157 6 27 290 211 461 1.38e-38 141
MS.gene032032.t1 AT2G18570 33.091 275 156 7 28 281 192 459 5.39e-38 140
MS.gene032032.t1 AT2G29740 33.904 292 164 9 10 284 195 474 1.71e-37 139
MS.gene032032.t1 AT3G21750 32.491 277 154 5 39 289 200 469 2.81e-37 138
MS.gene032032.t1 AT1G10400 32.841 271 161 8 28 288 203 462 3.66e-37 138
MS.gene032032.t1 AT4G34135 32.852 277 164 5 33 290 210 483 4.93e-37 137
MS.gene032032.t1 AT2G29730 30.272 294 184 7 10 292 183 466 1.10e-36 136
MS.gene032032.t1 AT5G14860 31.833 311 178 9 2 288 175 475 3.59e-36 135
MS.gene032032.t1 AT2G16890 32.573 307 180 8 4 294 178 473 6.21e-36 134
MS.gene032032.t1 AT1G07240 31.183 279 168 6 28 289 205 476 8.84e-35 131
MS.gene032032.t1 AT2G29710 29.831 295 187 7 10 293 182 467 1.70e-34 130
MS.gene032032.t1 AT3G53150 30.000 330 183 12 4 289 185 510 2.06e-33 128
MS.gene032032.t1 AT5G12890 34.701 268 150 12 43 292 225 485 5.73e-33 127
MS.gene032032.t1 AT2G29750 31.633 294 175 10 10 290 195 475 1.03e-32 126
MS.gene032032.t1 AT1G73880 32.946 258 157 6 43 291 219 469 1.17e-32 125
MS.gene032032.t1 AT1G06000 29.655 290 190 7 10 288 147 433 9.60e-29 114
MS.gene032032.t1 AT5G03490 32.549 255 151 8 41 287 220 461 3.47e-28 113
MS.gene032032.t1 AT5G65550 32.365 241 149 6 32 266 208 440 7.62e-27 109
MS.gene032032.t1 AT2G16890 31.538 260 149 8 3 246 169 415 1.16e-26 108
MS.gene032032.t1 AT1G51210 31.441 229 140 6 41 263 215 432 1.49e-26 108
MS.gene032032.t1 AT5G49690 30.738 244 143 8 32 265 205 432 8.04e-26 106
MS.gene032032.t1 AT2G22590 34.848 198 118 5 97 286 274 468 1.71e-24 103
MS.gene032032.t1 AT5G54060 30.970 268 167 8 35 294 211 468 8.34e-24 100
MS.gene032032.t1 AT4G27570 31.839 223 130 8 90 297 237 452 3.81e-22 96.3
MS.gene032032.t1 AT4G27560 31.696 224 131 8 90 298 237 453 8.26e-22 95.1
MS.gene032032.t1 AT1G64910 29.187 209 134 6 97 297 244 446 6.98e-21 92.4
MS.gene032032.t1 AT5G53990 28.365 208 135 6 97 296 244 445 7.73e-19 86.7
MS.gene032032.t1 AT5G54010 30.508 177 113 5 97 265 250 424 4.36e-18 84.3
MS.gene032032.t1 AT2G22930 26.568 271 178 9 27 288 179 437 6.01e-18 84.0
MS.gene032032.t1 AT3G29630 29.703 202 127 6 96 288 245 440 6.38e-18 84.0
MS.gene032032.t1 AT3G29630 29.703 202 127 6 96 288 219 414 7.42e-18 83.6
MS.gene032032.t1 AT4G01070 34.940 166 90 6 20 173 187 346 2.19e-17 81.6
MS.gene032032.t1 AT4G09500 31.176 170 107 5 104 265 251 418 2.71e-16 79.3
MS.gene032032.t1 AT4G09500 31.176 170 107 5 104 265 226 393 3.00e-16 79.0
MS.gene032032.t1 AT1G64920 26.259 278 172 9 26 284 178 441 3.43e-16 79.0
MS.gene032032.t1 AT1G50580 27.670 206 139 5 97 294 245 448 7.81e-16 77.8

Find 77 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAATTCTACGAGCTTAT+TGG 0.155567 3.4:-69728413 MS.gene032032:CDS
AAGTGGGTTCTTAGAAAATT+TGG 0.172848 3.4:-69728191 MS.gene032032:CDS
CATACTTGGCATTGATCTTT+TGG 0.180248 3.4:+69728017 None:intergenic
AGAAATCCTCGGGGATTATT+TGG 0.186890 3.4:-69728540 MS.gene032032:CDS
CAGACAAAACCTGCATTTCT+TGG 0.236067 3.4:-69728387 MS.gene032032:CDS
CCAAACATCACTTGCATACT+TGG 0.275753 3.4:+69728003 None:intergenic
ATGATATGTATGCCATCTTT+TGG 0.300492 3.4:-69728043 MS.gene032032:CDS
TTCCACAGATACTCTCTTGC+TGG 0.318446 3.4:-69728436 MS.gene032032:CDS
ATCCTGCGGTTGGAGCATTT+TGG 0.319308 3.4:-69728117 MS.gene032032:CDS
TTACAGTTTCCTTGATTCCT+TGG 0.331333 3.4:-69727825 MS.gene032032:CDS
ATCTGTGGAAAGGGCCTATA+GGG 0.368890 3.4:+69728449 None:intergenic
AGTGGGTTCTTAGAAAATTT+GGG 0.369359 3.4:-69728190 MS.gene032032:CDS
AATAAGCGAGGCAGAGTTCT+TGG 0.371844 3.4:-69728308 MS.gene032032:CDS
AAAGAGGGTATATTGTGAAA+TGG 0.375541 3.4:-69728165 MS.gene032032:CDS
AGTGTTGTTTATGTGAGTTT+TGG 0.377681 3.4:-69728343 MS.gene032032:CDS
TATCTGTGGAAAGGGCCTAT+AGG 0.398369 3.4:+69728448 None:intergenic
GCAAGTGATGTTTGGAAGGT+TGG 0.401026 3.4:-69727995 MS.gene032032:CDS
TTTCCTGTGGGCGATTCGAC+CGG 0.409681 3.4:-69728251 MS.gene032032:CDS
AGAGTTCTTGGAGATAGCTT+GGG 0.419118 3.4:-69728296 MS.gene032032:CDS
GCTAATGTTTGTTTGAAAGA+AGG 0.421594 3.4:-69727857 MS.gene032032:CDS
CCAAGTATGCAAGTGATGTT+TGG 0.426349 3.4:-69728003 MS.gene032032:CDS
GAAGGTAATTCGAAAACTAA+TGG 0.431623 3.4:-69727933 MS.gene032032:CDS
TTGGAACACCTTTGAAGAGT+TGG 0.440155 3.4:-69728521 MS.gene032032:CDS
AAAGATGGCATACATATCAT+TGG 0.440902 3.4:+69728046 None:intergenic
CAGAGTTCTTGGAGATAGCT+TGG 0.443688 3.4:-69728297 MS.gene032032:CDS
TCTGTGCCAATATACCCTAT+AGG 0.445664 3.4:-69728463 MS.gene032032:CDS
AAGAGGGTATATTGTGAAAT+GGG 0.448054 3.4:-69728164 MS.gene032032:CDS
TTCCTGTGGGCGATTCGACC+GGG 0.449702 3.4:-69728250 MS.gene032032:CDS
AAAGGGCCTATAGGGTATAT+TGG 0.450935 3.4:+69728457 None:intergenic
TGTCAAGAATTTGAAAGAAA+AGG 0.456790 3.4:-69727879 MS.gene032032:CDS
TGCTTCAGCACTTGCTCTTG+AGG 0.457695 3.4:+69728139 None:intergenic
TTAGAAAATTTGGGAGAAAG+AGG 0.459729 3.4:-69728181 MS.gene032032:CDS
AAACTAATGGTTGGAGATGA+AGG 0.473456 3.4:-69727920 MS.gene032032:CDS
TTTGTCTAACCAAGAAATGC+AGG 0.485542 3.4:+69728378 None:intergenic
CAAGAGAGTATCTGTGGAAA+GGG 0.487251 3.4:+69728440 None:intergenic
TCCGATCCGCGGATTGTCCC+CGG 0.491629 3.4:+69728232 None:intergenic
GAGTTCTTGGAGATAGCTTG+GGG 0.494384 3.4:-69728295 MS.gene032032:CDS
TAGAAAATTTGGGAGAAAGA+GGG 0.494998 3.4:-69728180 MS.gene032032:CDS
GGCTTGAACCATTGCCAAGT+GGG 0.497443 3.4:-69728207 MS.gene032032:CDS
TTTCACTAACCAAGGAATCA+AGG 0.498847 3.4:+69727816 None:intergenic
GTGCTGAAGCATCCTGCGGT+TGG 0.511431 3.4:-69728127 MS.gene032032:CDS
GATGAGTGCAAGAAATCCTC+GGG 0.513220 3.4:-69728550 MS.gene032032:CDS
ACTAGTTTGTAAAATGCCTC+AGG 0.516788 3.4:+69728586 None:intergenic
GGAAGGTCTTTCACTTTGAG+TGG 0.523714 3.4:+69728628 None:intergenic
GTAATTCGAAAACTAATGGT+TGG 0.531429 3.4:-69727929 MS.gene032032:CDS
TGAGAGAGGAGAGATTGAGA+AGG 0.538693 3.4:-69727951 MS.gene032032:CDS
AATGTTTGTTTGAAAGAAGG+TGG 0.541615 3.4:-69727854 MS.gene032032:CDS
CGATGAGTGCAAGAAATCCT+CGG 0.543342 3.4:-69728551 MS.gene032032:CDS
GCAAGAGAGTATCTGTGGAA+AGG 0.543719 3.4:+69728439 None:intergenic
ACCGGGGACAATCCGCGGAT+CGG 0.551844 3.4:-69728233 MS.gene032032:CDS
TCTAAGAACCCACTTGGCAA+TGG 0.552340 3.4:+69728199 None:intergenic
GGTCGAATCGCCCACAGGAA+AGG 0.554283 3.4:+69728253 None:intergenic
ATCTCGAATGGAGGAAGCTG+TGG 0.567911 3.4:-69728662 None:intergenic
GTCCAAAATGCTCCAACCGC+AGG 0.569206 3.4:+69728115 None:intergenic
TCCCCGGTCGAATCGCCCAC+AGG 0.571099 3.4:+69728248 None:intergenic
GGACAATCCGCGGATCGGAA+TGG 0.573065 3.4:-69728228 MS.gene032032:CDS
AGGTCTTTCACTTTGAGTGG+TGG 0.577800 3.4:+69728631 None:intergenic
CGACAATATTTCACTAACCA+AGG 0.578794 3.4:+69727808 None:intergenic
ATTCGACCGGGGACAATCCG+CGG 0.586643 3.4:-69728238 MS.gene032032:CDS
TCGAATGGAGGAAGCTGTGG+AGG 0.595937 3.4:-69728659 None:intergenic
TCCTGTGGGCGATTCGACCG+GGG 0.601340 3.4:-69728249 MS.gene032032:CDS
AGATGATTCCAACTCTTCAA+AGG 0.611022 3.4:+69728513 None:intergenic
ACAGCAATCAACCTTTCCTG+TGG 0.613913 3.4:-69728264 MS.gene032032:CDS
AGCCAGCAAGAGAGTATCTG+TGG 0.615864 3.4:+69728434 None:intergenic
CAGCAATCAACCTTTCCTGT+GGG 0.616158 3.4:-69728263 MS.gene032032:CDS
TAATGGTTGGAATTCAACGT+TGG 0.617257 3.4:-69728089 MS.gene032032:CDS
GTTCAAGCCATTCCGATCCG+CGG 0.623462 3.4:+69728221 None:intergenic
TTAGAGAGTAAGCTTGAGAG+AGG 0.634076 3.4:-69727965 MS.gene032032:CDS
GTATGCAAGTGATGTTTGGA+AGG 0.637152 3.4:-69727999 MS.gene032032:CDS
TGGCTTGAACCATTGCCAAG+TGG 0.661540 3.4:-69728208 MS.gene032032:CDS
GTTTCAGTCAAAAGAACCTG+AGG 0.686260 3.4:-69728602 MS.gene032032:CDS
GAGTATTGTAGCAATAAGCG+AGG 0.702135 3.4:-69728320 MS.gene032032:CDS
GCAAGTGCTGAAGCATCCTG+CGG 0.705190 3.4:-69728131 MS.gene032032:CDS
GGTGTTCCAAATAATCCCCG+AGG 0.736370 3.4:+69728534 None:intergenic
AGTTCTTGGAGATAGCTTGG+GGG 0.753471 3.4:-69728294 MS.gene032032:CDS
ACGTTGGAGAGTGTATGTGA+AGG 0.776339 3.4:-69728073 MS.gene032032:CDS
ATGAGTGCAAGAAATCCTCG+GGG 0.786157 3.4:-69728549 MS.gene032032:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TGTCAAGAATTTGAAAGAAA+AGG - chr3.4:69728554-69728573 MS.gene032032:CDS 25.0%
AAAGATGGCATACATATCAT+TGG + chr3.4:69728390-69728409 None:intergenic 30.0%
AATGTTTGTTTGAAAGAAGG+TGG - chr3.4:69728579-69728598 MS.gene032032:CDS 30.0%
GAAGGTAATTCGAAAACTAA+TGG - chr3.4:69728500-69728519 MS.gene032032:CDS 30.0%
GCTAATGTTTGTTTGAAAGA+AGG - chr3.4:69728576-69728595 MS.gene032032:CDS 30.0%
GTAATTCGAAAACTAATGGT+TGG - chr3.4:69728504-69728523 MS.gene032032:CDS 30.0%
TAGAAAATTTGGGAGAAAGA+GGG - chr3.4:69728253-69728272 MS.gene032032:CDS 30.0%
TTAGAAAATTTGGGAGAAAG+AGG - chr3.4:69728252-69728271 MS.gene032032:CDS 30.0%
! AAAGAGGGTATATTGTGAAA+TGG - chr3.4:69728268-69728287 MS.gene032032:CDS 30.0%
! AAGAGGGTATATTGTGAAAT+GGG - chr3.4:69728269-69728288 MS.gene032032:CDS 30.0%
! AAGTGGGTTCTTAGAAAATT+TGG - chr3.4:69728242-69728261 MS.gene032032:CDS 30.0%
! AGTGGGTTCTTAGAAAATTT+GGG - chr3.4:69728243-69728262 MS.gene032032:CDS 30.0%
! ATGATATGTATGCCATCTTT+TGG - chr3.4:69728390-69728409 MS.gene032032:CDS 30.0%
!! AAATTTTCTAAGAACCCACT+TGG + chr3.4:69728243-69728262 None:intergenic 30.0%
!!! AGTGTTGTTTATGTGAGTTT+TGG - chr3.4:69728090-69728109 MS.gene032032:CDS 30.0%
!!! GTGTTGTTTATGTGAGTTTT+GGG - chr3.4:69728091-69728110 MS.gene032032:CDS 30.0%
AAACTAATGGTTGGAGATGA+AGG - chr3.4:69728513-69728532 MS.gene032032:CDS 35.0%
AGATGATTCCAACTCTTCAA+AGG + chr3.4:69727923-69727942 None:intergenic 35.0%
ATATTGGCACAGAAAAAGCT+TGG + chr3.4:69727963-69727982 None:intergenic 35.0%
CGACAATATTTCACTAACCA+AGG + chr3.4:69728628-69728647 None:intergenic 35.0%
CTCAAATTCTACGAGCTTAT+TGG - chr3.4:69728020-69728039 MS.gene032032:CDS 35.0%
TAATGGTTGGAATTCAACGT+TGG - chr3.4:69728344-69728363 MS.gene032032:CDS 35.0%
TTACAGTTTCCTTGATTCCT+TGG - chr3.4:69728608-69728627 MS.gene032032:CDS 35.0%
TTTCACTAACCAAGGAATCA+AGG + chr3.4:69728620-69728639 None:intergenic 35.0%
TTTGTCTAACCAAGAAATGC+AGG + chr3.4:69728058-69728077 None:intergenic 35.0%
! ACTAGTTTGTAAAATGCCTC+AGG + chr3.4:69727850-69727869 None:intergenic 35.0%
! ATCTTTTGGTCTCCAAAAGA+TGG + chr3.4:69728405-69728424 None:intergenic 35.0%
! CATTTTGGACTCATAATGGT+TGG - chr3.4:69728331-69728350 MS.gene032032:CDS 35.0%
!!! CATACTTGGCATTGATCTTT+TGG + chr3.4:69728419-69728438 None:intergenic 35.0%
AAAGGGCCTATAGGGTATAT+TGG + chr3.4:69727979-69727998 None:intergenic 40.0%
AGAAATCCTCGGGGATTATT+TGG - chr3.4:69727893-69727912 MS.gene032032:CDS 40.0%
AGAGTTCTTGGAGATAGCTT+GGG - chr3.4:69728137-69728156 MS.gene032032:CDS 40.0%
CAGACAAAACCTGCATTTCT+TGG - chr3.4:69728046-69728065 MS.gene032032:CDS 40.0%
CCAAACATCACTTGCATACT+TGG + chr3.4:69728433-69728452 None:intergenic 40.0%
CCAAGTATGCAAGTGATGTT+TGG - chr3.4:69728430-69728449 MS.gene032032:CDS 40.0%
GTATGCAAGTGATGTTTGGA+AGG - chr3.4:69728434-69728453 MS.gene032032:CDS 40.0%
GTTTCAGTCAAAAGAACCTG+AGG - chr3.4:69727831-69727850 MS.gene032032:CDS 40.0%
TCTGTGCCAATATACCCTAT+AGG - chr3.4:69727970-69727989 MS.gene032032:CDS 40.0%
TTAGAGAGTAAGCTTGAGAG+AGG - chr3.4:69728468-69728487 MS.gene032032:CDS 40.0%
! GAGTATTGTAGCAATAAGCG+AGG - chr3.4:69728113-69728132 MS.gene032032:CDS 40.0%
! TTGGAACACCTTTGAAGAGT+TGG - chr3.4:69727912-69727931 MS.gene032032:CDS 40.0%
!! CAAGAAATGCAGGTTTTGTC+TGG + chr3.4:69728048-69728067 None:intergenic 40.0%
!! CAAGAGAGTATCTGTGGAAA+GGG + chr3.4:69727996-69728015 None:intergenic 40.0%
!! CTTTTGACTGAAACACAGGA+AGG + chr3.4:69727825-69727844 None:intergenic 40.0%
!! GGAGCATTTTGGACTCATAA+TGG - chr3.4:69728327-69728346 MS.gene032032:CDS 40.0%
!! GGTTCTTTTGACTGAAACAC+AGG + chr3.4:69727829-69727848 None:intergenic 40.0%
AATAAGCGAGGCAGAGTTCT+TGG - chr3.4:69728125-69728144 MS.gene032032:CDS 45.0%
ACAGCAATCAACCTTTCCTG+TGG - chr3.4:69728169-69728188 MS.gene032032:CDS 45.0%
AGGTCTTTCACTTTGAGTGG+TGG + chr3.4:69727805-69727824 None:intergenic 45.0%
AGTTCTTGGAGATAGCTTGG+GGG - chr3.4:69728139-69728158 MS.gene032032:CDS 45.0%
ATCTGTGGAAAGGGCCTATA+GGG + chr3.4:69727987-69728006 None:intergenic 45.0%
ATGAGTGCAAGAAATCCTCG+GGG - chr3.4:69727884-69727903 MS.gene032032:CDS 45.0%
CAGAGTTCTTGGAGATAGCT+TGG - chr3.4:69728136-69728155 MS.gene032032:CDS 45.0%
CAGCAATCAACCTTTCCTGT+GGG - chr3.4:69728170-69728189 MS.gene032032:CDS 45.0%
CGATGAGTGCAAGAAATCCT+CGG - chr3.4:69727882-69727901 MS.gene032032:CDS 45.0%
GAGTTCTTGGAGATAGCTTG+GGG - chr3.4:69728138-69728157 MS.gene032032:CDS 45.0%
GATGAGTGCAAGAAATCCTC+GGG - chr3.4:69727883-69727902 MS.gene032032:CDS 45.0%
GCAAGTGATGTTTGGAAGGT+TGG - chr3.4:69728438-69728457 MS.gene032032:CDS 45.0%
GGAAGGTCTTTCACTTTGAG+TGG + chr3.4:69727808-69727827 None:intergenic 45.0%
TATCTGTGGAAAGGGCCTAT+AGG + chr3.4:69727988-69728007 None:intergenic 45.0%
TCTAAGAACCCACTTGGCAA+TGG + chr3.4:69728237-69728256 None:intergenic 45.0%
TGAGAGAGGAGAGATTGAGA+AGG - chr3.4:69728482-69728501 MS.gene032032:CDS 45.0%
TTCCACAGATACTCTCTTGC+TGG - chr3.4:69727997-69728016 MS.gene032032:CDS 45.0%
! ACGTTGGAGAGTGTATGTGA+AGG - chr3.4:69728360-69728379 MS.gene032032:CDS 45.0%
!! GCAAGAGAGTATCTGTGGAA+AGG + chr3.4:69727997-69728016 None:intergenic 45.0%
GGCTTGAACCATTGCCAAGT+GGG - chr3.4:69728226-69728245 MS.gene032032:CDS 50.0%
GGTGTTCCAAATAATCCCCG+AGG + chr3.4:69727902-69727921 None:intergenic 50.0%
TGCTTCAGCACTTGCTCTTG+AGG + chr3.4:69728297-69728316 None:intergenic 50.0%
TGGCTTGAACCATTGCCAAG+TGG - chr3.4:69728225-69728244 MS.gene032032:CDS 50.0%
!! AGCCAGCAAGAGAGTATCTG+TGG + chr3.4:69728002-69728021 None:intergenic 50.0%
!! ATCCTGCGGTTGGAGCATTT+TGG - chr3.4:69728316-69728335 MS.gene032032:CDS 50.0%
GTCCAAAATGCTCCAACCGC+AGG + chr3.4:69728321-69728340 None:intergenic 55.0%
GTTCAAGCCATTCCGATCCG+CGG + chr3.4:69728215-69728234 None:intergenic 55.0%
TTTCCTGTGGGCGATTCGAC+CGG - chr3.4:69728182-69728201 MS.gene032032:CDS 55.0%
!! GCAAGTGCTGAAGCATCCTG+CGG - chr3.4:69728302-69728321 MS.gene032032:CDS 55.0%
ATTCGACCGGGGACAATCCG+CGG - chr3.4:69728195-69728214 MS.gene032032:CDS 60.0%
GGACAATCCGCGGATCGGAA+TGG - chr3.4:69728205-69728224 MS.gene032032:CDS 60.0%
GGTCGAATCGCCCACAGGAA+AGG + chr3.4:69728183-69728202 None:intergenic 60.0%
TTCCTGTGGGCGATTCGACC+GGG - chr3.4:69728183-69728202 MS.gene032032:CDS 60.0%
! GTGCTGAAGCATCCTGCGGT+TGG - chr3.4:69728306-69728325 MS.gene032032:CDS 60.0%
ACCGGGGACAATCCGCGGAT+CGG - chr3.4:69728200-69728219 MS.gene032032:CDS 65.0%
TCCTGTGGGCGATTCGACCG+GGG - chr3.4:69728184-69728203 MS.gene032032:CDS 65.0%
! TCCGATCCGCGGATTGTCCC+CGG + chr3.4:69728204-69728223 None:intergenic 65.0%
TCCCCGGTCGAATCGCCCAC+AGG + chr3.4:69728188-69728207 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 69727778 69728677 69727778 ID=MS.gene032032
chr3.4 mRNA 69727778 69728677 69727778 ID=MS.gene032032.t1;Parent=MS.gene032032
chr3.4 exon 69727778 69728677 69727778 ID=MS.gene032032.t1.exon1;Parent=MS.gene032032.t1
chr3.4 CDS 69727778 69728677 69727778 ID=cds.MS.gene032032.t1;Parent=MS.gene032032.t1
Gene Sequence

>MS.gene032032

ATGGAGGAAGCTGTGGAGGATCTTCCACCACTCAAAGTGAAAGACCTTCCTGTGTTTCAGTCAAAAGAACCTGAGGCATTTTACAAACTAGTTTGTCGCTTTATCGATGAGTGCAAGAAATCCTCGGGGATTATTTGGAACACCTTTGAAGAGTTGGAATCATCTGCATTAACAAAATTGCGCCAAGCTTTTTCTGTGCCAATATACCCTATAGGCCCTTTCCACAGATACTCTCTTGCTGGCTCAAATTCTACGAGCTTATTGGCACCAGACAAAACCTGCATTTCTTGGTTAGACAAACAAGAACATAAAAGTGTTGTTTATGTGAGTTTTGGGAGTATTGTAGCAATAAGCGAGGCAGAGTTCTTGGAGATAGCTTGGGGGTTAGTCAACAGCAATCAACCTTTCCTGTGGGCGATTCGACCGGGGACAATCCGCGGATCGGAATGGCTTGAACCATTGCCAAGTGGGTTCTTAGAAAATTTGGGAGAAAGAGGGTATATTGTGAAATGGGCTCCTCAAGAGCAAGTGCTGAAGCATCCTGCGGTTGGAGCATTTTGGACTCATAATGGTTGGAATTCAACGTTGGAGAGTGTATGTGAAGGTGTTCCAATGATATGTATGCCATCTTTTGGAGACCAAAAGATCAATGCCAAGTATGCAAGTGATGTTTGGAAGGTTGGAGTGCAGTTAGAGAGTAAGCTTGAGAGAGGAGAGATTGAGAAGGTAATTCGAAAACTAATGGTTGGAGATGAAGGTAATGAGATTAGAGAGAATGTCAAGAATTTGAAAGAAAAGGCTAATGTTTGTTTGAAAGAAGGTGGTTCTTCTTACAGTTTCCTTGATTCCTTGGTTAGTGAAATATTGTCGCTTAAATCTTCTACATCTAGAGCTCACTGA
Protein sequence

>MS.gene032032.t1

MEEAVEDLPPLKVKDLPVFQSKEPEAFYKLVCRFIDECKKSSGIIWNTFEELESSALTKLRQAFSVPIYPIGPFHRYSLAGSNSTSLLAPDKTCISWLDKQEHKSVVYVSFGSIVAISEAEFLEIAWGLVNSNQPFLWAIRPGTIRGSEWLEPLPSGFLENLGERGYIVKWAPQEQVLKHPAVGAFWTHNGWNSTLESVCEGVPMICMPSFGDQKINAKYASDVWKVGVQLESKLERGEIEKVIRKLMVGDEGNEIRENVKNLKEKANVCLKEGGSSYSFLDSLVSEILSLKSSTSRAH