AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057369

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057369.t1 MTR_3g069710 98.328 299 5 0 1 299 164 462 0.0 605
MS.gene057369.t1 MTR_3g069690 63.455 301 107 2 1 298 159 459 2.35e-139 401
MS.gene057369.t1 MTR_4g064987 46.259 294 151 5 2 293 160 448 1.64e-83 258
MS.gene057369.t1 MTR_4g064987 46.259 294 151 5 2 293 166 454 2.70e-83 258
MS.gene057369.t1 MTR_7g011470 41.472 299 160 5 1 289 173 466 5.62e-77 242
MS.gene057369.t1 MTR_7g011470 42.034 295 156 5 5 289 173 462 2.43e-76 240
MS.gene057369.t1 MTR_6g013450 41.156 294 160 5 5 289 192 481 1.12e-75 239
MS.gene057369.t1 MTR_6g011340 41.297 293 161 5 5 289 191 480 4.35e-75 238
MS.gene057369.t1 MTR_6g013990 41.000 300 161 7 1 289 184 478 5.08e-74 235
MS.gene057369.t1 MTR_6g013900 40.199 301 164 7 1 289 183 479 1.75e-72 231
MS.gene057369.t1 MTR_6g014220 40.789 304 159 7 1 289 181 478 2.71e-72 230
MS.gene057369.t1 MTR_5g058320 41.237 291 152 7 11 289 182 465 4.50e-72 229
MS.gene057369.t1 MTR_8g059425 37.908 306 176 6 1 295 182 484 4.79e-72 230
MS.gene057369.t1 MTR_6g013920 39.249 293 167 5 5 289 190 479 1.56e-71 229
MS.gene057369.t1 MTR_6g014310 37.627 295 173 5 3 289 190 481 2.69e-71 228
MS.gene057369.t1 MTR_6g014270 38.870 301 173 5 3 295 188 485 3.95e-71 228
MS.gene057369.t1 MTR_6g014050 39.931 288 160 6 11 289 198 481 4.79e-71 227
MS.gene057369.t1 MTR_6g014187 39.590 293 160 6 8 289 194 480 8.38e-71 227
MS.gene057369.t1 MTR_6g014040 40.893 291 153 6 11 289 198 481 1.75e-70 226
MS.gene057369.t1 MTR_0288s0020 40.541 296 150 7 1 289 185 461 1.08e-69 223
MS.gene057369.t1 MTR_3g479610 38.462 299 172 4 5 293 21 317 1.25e-69 219
MS.gene057369.t1 MTR_6g014190 37.543 293 172 5 11 295 4 293 1.42e-68 215
MS.gene057369.t1 MTR_3g079480 38.983 295 168 4 5 289 197 489 3.03e-68 220
MS.gene057369.t1 MTR_3g479490 38.255 298 166 5 5 289 182 474 7.11e-68 219
MS.gene057369.t1 MTR_6g014250 38.312 308 161 8 1 289 181 478 1.05e-67 219
MS.gene057369.t1 MTR_6g014200 38.644 295 170 5 3 289 186 477 2.28e-67 218
MS.gene057369.t1 MTR_0891s0010 37.329 292 171 4 8 289 1 290 7.00e-67 211
MS.gene057369.t1 MTR_3g008010 38.033 305 166 7 1 289 181 478 1.68e-66 215
MS.gene057369.t1 MTR_6g014020 38.542 288 164 6 11 289 197 480 2.05e-66 215
MS.gene057369.t1 MTR_3g479520 37.793 299 174 4 5 293 191 487 3.16e-66 215
MS.gene057369.t1 MTR_6g014150 36.877 301 179 4 3 295 186 483 4.50e-66 214
MS.gene057369.t1 MTR_4g094220 38.158 304 169 7 1 288 178 478 1.63e-65 213
MS.gene057369.t1 MTR_5g031840 37.748 302 171 6 1 290 167 463 2.10e-65 212
MS.gene057369.t1 MTR_6g013440 39.130 299 163 7 3 289 190 481 2.38e-65 213
MS.gene057369.t1 MTR_5g031860 39.016 305 165 7 1 290 173 471 1.60e-64 210
MS.gene057369.t1 MTR_6g014240 37.705 305 162 8 1 295 167 453 5.39e-64 208
MS.gene057369.t1 MTR_6g013960 37.874 301 171 7 1 289 184 480 6.17e-64 209
MS.gene057369.t1 MTR_5g031830 38.361 305 168 6 1 290 173 472 6.84e-64 208
MS.gene057369.t1 MTR_0477s0010 37.415 294 148 6 1 289 55 317 1.30e-63 203
MS.gene057369.t1 MTR_6g014290 36.393 305 171 8 1 289 181 478 1.96e-63 207
MS.gene057369.t1 MTR_6g014170 42.672 232 118 3 68 289 236 462 2.16e-63 207
MS.gene057369.t1 MTR_5g464810 39.310 290 159 8 11 289 195 478 6.04e-63 206
MS.gene057369.t1 MTR_5g064240 39.310 290 159 8 11 289 195 478 6.04e-63 206
MS.gene057369.t1 MTR_2g008210 37.884 293 171 6 11 293 190 481 1.07e-61 203
MS.gene057369.t1 MTR_0036s0220 37.847 288 166 7 11 289 195 478 1.32e-61 202
MS.gene057369.t1 MTR_5g464760 39.057 297 156 10 11 291 195 482 3.99e-61 201
MS.gene057369.t1 MTR_8g007585 43.602 211 114 2 79 289 187 392 1.30e-60 198
MS.gene057369.t1 MTR_3g479470 39.721 287 160 4 11 287 195 478 6.82e-59 196
MS.gene057369.t1 MTR_6g014300 37.716 289 165 7 3 289 191 466 1.70e-58 194
MS.gene057369.t1 MTR_8g009055 40.625 288 145 9 10 277 174 455 2.99e-58 194
MS.gene057369.t1 MTR_0184s0040 38.776 294 161 6 10 287 189 479 2.49e-57 192
MS.gene057369.t1 MTR_0078s0190 38.776 294 161 6 10 287 189 479 2.49e-57 192
MS.gene057369.t1 MTR_1g107380 36.519 293 171 6 8 289 185 473 5.86e-55 185
MS.gene057369.t1 MTR_4g094920 38.305 295 167 5 8 289 188 480 7.68e-55 186
MS.gene057369.t1 MTR_8g043470 33.220 295 164 4 3 295 121 384 9.05e-55 182
MS.gene057369.t1 MTR_1g107350 39.273 275 152 7 26 288 197 468 1.23e-54 184
MS.gene057369.t1 MTR_6g005600 39.474 304 158 7 10 293 175 472 2.04e-54 184
MS.gene057369.t1 MTR_6g488280 38.776 294 152 7 10 284 176 460 7.68e-54 182
MS.gene057369.t1 MTR_0428s0010 38.776 294 152 7 10 284 176 460 7.68e-54 182
MS.gene057369.t1 MTR_6g023665 39.456 294 150 8 10 284 183 467 1.11e-53 182
MS.gene057369.t1 MTR_8g009067 36.860 293 163 7 10 285 56 343 1.53e-53 178
MS.gene057369.t1 MTR_1g107360 39.033 269 145 6 30 288 202 461 1.91e-53 181
MS.gene057369.t1 MTR_8g009050 37.201 293 162 5 10 284 174 462 1.92e-53 181
MS.gene057369.t1 MTR_8g008990 38.542 288 153 7 10 277 174 457 2.65e-53 181
MS.gene057369.t1 MTR_8g009073 37.543 293 161 7 10 285 45 332 2.72e-53 177
MS.gene057369.t1 MTR_8g009063 38.225 293 159 6 10 284 181 469 3.11e-53 181
MS.gene057369.t1 MTR_1g107375 35.739 291 158 6 18 288 172 453 1.30e-52 179
MS.gene057369.t1 MTR_8g009067 36.860 293 163 7 10 285 174 461 2.23e-52 178
MS.gene057369.t1 MTR_4g095008 36.824 296 170 6 8 289 173 465 2.80e-52 179
MS.gene057369.t1 MTR_8g006710 37.919 298 158 8 10 288 176 465 3.10e-52 178
MS.gene057369.t1 MTR_8g009073 37.671 292 160 7 10 284 174 460 6.69e-52 177
MS.gene057369.t1 MTR_7g047030 35.473 296 171 6 10 288 174 466 7.32e-52 177
MS.gene057369.t1 MTR_7g047270 35.473 296 171 6 10 288 174 466 7.32e-52 177
MS.gene057369.t1 MTR_1g019510 38.014 292 158 5 10 284 174 459 3.67e-51 175
MS.gene057369.t1 MTR_0078s0010 35.811 296 170 7 10 288 174 466 5.01e-51 175
MS.gene057369.t1 MTR_8g012650 36.774 310 158 10 10 291 175 474 5.65e-51 175
MS.gene057369.t1 MTR_8g027885 40.569 281 143 8 14 277 188 461 5.86e-51 175
MS.gene057369.t1 MTR_8g077590 38.644 295 152 9 10 284 177 462 6.06e-51 174
MS.gene057369.t1 MTR_0184s0030 38.732 284 154 7 10 277 177 456 9.28e-51 174
MS.gene057369.t1 MTR_8g027870 40.426 282 142 9 14 277 188 461 1.12e-50 174
MS.gene057369.t1 MTR_6g033725 39.384 292 151 9 8 284 177 457 1.94e-50 173
MS.gene057369.t1 MTR_7g046490 37.627 295 157 9 11 286 175 461 2.07e-50 173
MS.gene057369.t1 MTR_8g006270 37.417 302 155 11 10 287 171 462 4.74e-50 172
MS.gene057369.t1 MTR_5g098930 36.306 314 163 8 7 290 163 469 6.37e-50 172
MS.gene057369.t1 MTR_1g107365 36.742 264 147 5 35 288 238 491 6.48e-50 172
MS.gene057369.t1 MTR_8g083290 37.584 298 156 7 14 285 171 464 1.82e-49 171
MS.gene057369.t1 MTR_4g485630 35.314 303 169 6 8 290 180 475 2.67e-49 170
MS.gene057369.t1 MTR_8g006730 36.054 294 161 8 10 284 177 462 3.88e-49 170
MS.gene057369.t1 MTR_8g066610 36.000 300 168 5 8 291 189 480 6.78e-49 169
MS.gene057369.t1 MTR_3g049970 36.471 255 151 5 44 288 216 469 8.57e-49 169
MS.gene057369.t1 MTR_1g107315 38.824 255 145 5 44 288 215 468 1.58e-48 168
MS.gene057369.t1 MTR_2086s0010 40.449 178 105 1 117 294 1 177 1.66e-48 160
MS.gene057369.t1 MTR_1996s0010 40.449 178 105 1 117 294 1 177 1.66e-48 160
MS.gene057369.t1 MTR_7g117170 37.091 275 151 6 28 284 201 471 1.71e-48 168
MS.gene057369.t1 MTR_0078s0060 35.811 296 169 7 10 288 174 465 1.82e-48 168
MS.gene057369.t1 MTR_8g064870 37.313 268 153 7 35 288 207 473 2.31e-48 168
MS.gene057369.t1 MTR_6g033625 37.037 297 157 8 10 284 172 460 2.15e-47 165
MS.gene057369.t1 MTR_5g016480 35.548 301 166 9 8 289 180 471 2.31e-47 165
MS.gene057369.t1 MTR_7g013180 41.350 237 120 7 47 279 217 438 2.37e-47 164
MS.gene057369.t1 MTR_6g033675 35.473 296 174 6 1 284 170 460 2.85e-47 165
MS.gene057369.t1 MTR_8g012635 36.770 291 156 9 10 277 175 460 3.29e-47 165
MS.gene057369.t1 MTR_8g012745 37.075 294 148 9 10 277 175 457 3.60e-47 164
MS.gene057369.t1 MTR_1g107285 36.630 273 150 6 29 288 201 463 3.94e-47 164
MS.gene057369.t1 MTR_6g038240 38.127 299 156 10 8 289 169 455 5.54e-47 164
MS.gene057369.t1 MTR_1g032490 35.714 294 176 7 11 292 182 474 5.63e-47 164
MS.gene057369.t1 MTR_8g006260 35.789 285 153 7 15 277 182 458 5.93e-47 164
MS.gene057369.t1 MTR_8g008970 35.616 292 166 7 10 284 174 460 5.96e-47 168
MS.gene057369.t1 MTR_8g008970 36.226 265 152 5 28 285 531 785 1.63e-40 150
MS.gene057369.t1 MTR_7g013240 38.934 244 129 7 47 286 210 437 7.82e-47 163
MS.gene057369.t1 MTR_5g090670 36.928 306 160 9 10 289 179 477 2.15e-46 162
MS.gene057369.t1 MTR_7g070610 36.364 286 148 6 39 296 215 494 2.35e-46 163
MS.gene057369.t1 MTR_3g009510 37.838 296 150 9 17 285 185 473 2.83e-46 162
MS.gene057369.t1 MTR_8g088560 34.868 304 173 8 1 288 163 457 3.09e-46 162
MS.gene057369.t1 MTR_4g031800 33.127 323 184 9 2 296 162 480 3.91e-46 162
MS.gene057369.t1 MTR_6g033615 35.354 297 164 9 5 284 161 446 4.69e-46 161
MS.gene057369.t1 MTR_8g083280 39.921 253 134 5 44 289 221 462 6.25e-46 161
MS.gene057369.t1 MTR_6g033660 36.803 269 146 6 32 284 199 459 9.89e-46 161
MS.gene057369.t1 MTR_6g038200 37.584 298 157 10 8 288 169 454 1.06e-45 160
MS.gene057369.t1 MTR_8g064880 36.610 295 168 9 11 288 183 475 1.08e-45 161
MS.gene057369.t1 MTR_6g013680 33.445 299 128 9 3 289 136 375 1.08e-45 159
MS.gene057369.t1 MTR_8g465670 35.762 302 154 11 11 285 179 467 1.21e-45 160
MS.gene057369.t1 MTR_5g090660 35.690 297 149 7 39 299 204 494 2.34e-45 161
MS.gene057369.t1 MTR_5g072810 32.343 303 181 5 1 290 164 455 2.72e-45 159
MS.gene057369.t1 MTR_7g013260 38.115 244 131 7 47 286 211 438 3.88e-45 159
MS.gene057369.t1 MTR_8g012630 43.564 202 96 4 94 277 203 404 4.39e-45 158
MS.gene057369.t1 MTR_7g080950 31.579 304 177 7 8 293 162 452 9.79e-45 158
MS.gene057369.t1 MTR_7g071040 35.738 305 158 8 22 296 202 498 1.02e-44 159
MS.gene057369.t1 MTR_5g004940 39.196 199 108 1 90 288 192 377 1.06e-44 156
MS.gene057369.t1 MTR_1g019520 43.689 206 101 4 94 284 3 208 1.11e-44 151
MS.gene057369.t1 MTR_6g038230 38.000 300 153 10 8 288 169 454 1.51e-44 157
MS.gene057369.t1 MTR_7g070660 35.842 279 150 6 39 294 213 485 1.92e-44 157
MS.gene057369.t1 MTR_4g128690 32.069 290 183 5 3 290 177 454 4.28e-44 156
MS.gene057369.t1 MTR_4g117980 33.866 313 173 9 13 294 178 487 5.43e-44 156
MS.gene057369.t1 MTR_5g090630 36.177 293 153 7 22 289 183 466 6.35e-44 156
MS.gene057369.t1 MTR_5g090580 35.880 301 147 8 21 290 191 476 8.11e-44 155
MS.gene057369.t1 MTR_7g102560 34.909 275 151 8 41 289 212 484 1.19e-43 155
MS.gene057369.t1 MTR_7g012120 35.430 302 170 9 16 292 186 487 1.32e-43 155
MS.gene057369.t1 MTR_5g090700 34.641 306 165 8 11 290 182 478 1.37e-43 155
MS.gene057369.t1 MTR_4g024020 32.746 284 161 7 41 298 218 497 1.54e-43 155
MS.gene057369.t1 MTR_5g019580 35.689 283 148 6 27 281 195 471 1.84e-43 155
MS.gene057369.t1 MTR_7g013220 37.295 244 133 6 47 286 221 448 1.92e-43 154
MS.gene057369.t1 MTR_6g038300 34.237 295 172 7 8 288 169 455 2.40e-43 154
MS.gene057369.t1 MTR_5g019580 37.079 267 134 6 43 281 235 495 2.61e-43 155
MS.gene057369.t1 MTR_5g035560 34.211 304 172 8 4 290 161 453 3.21e-43 154
MS.gene057369.t1 MTR_5g035580 34.564 298 167 8 5 285 164 450 3.22e-43 154
MS.gene057369.t1 MTR_5g072860 33.219 292 169 7 11 289 188 466 3.35e-43 154
MS.gene057369.t1 MTR_7g070740 34.505 313 176 8 7 296 185 491 5.17e-43 154
MS.gene057369.t1 MTR_7g070940 35.662 272 153 6 40 294 212 478 7.99e-43 153
MS.gene057369.t1 MTR_7g013200 37.959 245 130 6 47 286 210 437 8.52e-43 152
MS.gene057369.t1 MTR_7g070800 33.871 310 171 7 7 292 180 479 9.43e-43 153
MS.gene057369.t1 MTR_3g084520 38.868 265 139 8 44 288 211 472 9.75e-43 153
MS.gene057369.t1 MTR_7g070780 32.177 317 178 8 7 296 185 491 9.81e-43 153
MS.gene057369.t1 MTR_5g067170 35.117 299 169 8 21 294 187 485 1.01e-42 153
MS.gene057369.t1 MTR_6g038220 36.242 298 161 9 8 288 168 453 1.67e-42 152
MS.gene057369.t1 MTR_7g070860 33.224 304 167 6 7 292 181 466 1.76e-42 152
MS.gene057369.t1 MTR_7g070810 35.252 278 149 6 40 294 212 481 2.46e-42 152
MS.gene057369.t1 MTR_5g066390 41.509 159 91 1 131 289 59 215 3.09e-42 145
MS.gene057369.t1 MTR_7g080940 33.223 301 172 9 8 291 167 455 4.56e-42 150
MS.gene057369.t1 MTR_4g008630 33.446 296 178 7 9 288 170 462 4.57e-42 151
MS.gene057369.t1 MTR_5g072840 33.445 299 176 6 3 290 164 450 5.77e-42 150
MS.gene057369.t1 MTR_8g012730 34.602 289 141 8 6 276 38 296 8.33e-42 147
MS.gene057369.t1 MTR_5g090620 33.742 326 168 10 1 290 164 477 8.34e-42 150
MS.gene057369.t1 MTR_4g108250 33.684 285 155 6 40 296 217 495 9.73e-42 150
MS.gene057369.t1 MTR_1g029540 32.653 294 173 7 13 288 173 459 9.76e-42 150
MS.gene057369.t1 MTR_4g485620 36.431 269 147 6 40 291 196 457 1.04e-41 150
MS.gene057369.t1 MTR_6g014185 34.470 264 130 7 36 291 119 347 1.33e-41 147
MS.gene057369.t1 MTR_4g117960 32.781 302 177 9 21 296 187 488 1.65e-41 150
MS.gene057369.t1 MTR_4g117890 34.564 298 167 9 24 294 184 480 2.30e-41 149
MS.gene057369.t1 MTR_5g045960 34.875 281 151 9 41 294 216 491 3.79e-41 149
MS.gene057369.t1 MTR_7g080935 33.223 301 172 9 8 291 167 455 4.97e-41 148
MS.gene057369.t1 MTR_6g014186 30.333 300 157 8 1 289 181 439 8.16e-41 147
MS.gene057369.t1 MTR_8g032950 34.091 308 168 9 19 297 185 486 8.57e-41 148
MS.gene057369.t1 MTR_5g045970 31.818 308 181 8 11 292 192 496 9.39e-41 148
MS.gene057369.t1 MTR_2g046820 35.762 302 163 10 8 288 171 462 1.14e-40 147
MS.gene057369.t1 MTR_7g102490 33.091 275 154 7 41 289 217 487 1.30e-40 147
MS.gene057369.t1 MTR_6g014160 32.362 309 120 9 1 295 166 399 1.55e-40 145
MS.gene057369.t1 MTR_8g090095 31.507 292 181 6 13 288 191 479 1.59e-40 147
MS.gene057369.t1 MTR_5g090600 34.354 294 144 8 21 290 187 455 2.20e-40 146
MS.gene057369.t1 MTR_3g084540 34.740 308 163 10 11 288 174 473 2.21e-40 146
MS.gene057369.t1 MTR_5g072830 31.773 299 181 6 3 290 164 450 2.36e-40 146
MS.gene057369.t1 MTR_3g084530 36.704 267 142 7 44 288 211 472 2.74e-40 146
MS.gene057369.t1 MTR_7g117405 33.577 274 159 6 36 289 211 481 3.89e-40 146
MS.gene057369.t1 MTR_4g128720 30.526 285 184 5 8 290 185 457 4.08e-40 145
MS.gene057369.t1 MTR_5g090610 34.589 292 157 9 22 288 178 460 4.28e-40 145
MS.gene057369.t1 MTR_7g102450 36.331 278 153 8 40 294 201 477 4.61e-40 145
MS.gene057369.t1 MTR_1g062380 32.258 279 162 6 39 292 221 497 5.05e-40 146
MS.gene057369.t1 MTR_6g035265 32.381 315 184 10 7 292 163 477 5.21e-40 145
MS.gene057369.t1 MTR_5g070090 37.319 276 145 10 26 288 201 461 6.04e-40 145
MS.gene057369.t1 MTR_8g074550 33.003 303 157 8 28 290 193 489 7.07e-40 145
MS.gene057369.t1 MTR_7g055710 34.058 276 149 6 39 287 213 482 8.96e-40 145
MS.gene057369.t1 MTR_7g102460 33.212 274 154 7 41 289 216 485 9.23e-40 145
MS.gene057369.t1 MTR_5g072820 31.544 298 183 4 3 290 164 450 9.73e-40 144
MS.gene057369.t1 MTR_2g046750 36.093 302 157 10 10 288 177 465 1.08e-39 144
MS.gene057369.t1 MTR_2g035040 32.323 297 176 7 22 293 95 391 1.17e-39 143
MS.gene057369.t1 MTR_8g006220 34.727 311 154 13 11 285 178 475 1.50e-39 144
MS.gene057369.t1 MTR_5g075440 32.567 261 158 4 40 291 207 458 1.51e-39 144
MS.gene057369.t1 MTR_2g040530 33.550 307 162 9 10 288 172 464 2.16e-39 144
MS.gene057369.t1 MTR_4g485640 32.698 315 179 10 1 285 352 663 6.60e-39 145
MS.gene057369.t1 MTR_0536s0020 32.890 301 174 10 24 297 189 488 9.28e-39 142
MS.gene057369.t1 MTR_2g034990 32.781 302 166 9 22 292 190 485 1.64e-38 142
MS.gene057369.t1 MTR_7g070930 33.566 286 154 7 36 292 213 491 2.27e-38 141
MS.gene057369.t1 MTR_3g031450 30.492 305 176 8 11 295 174 462 2.48e-38 141
MS.gene057369.t1 MTR_3g031400 32.432 259 154 4 40 289 204 450 5.54e-38 140
MS.gene057369.t1 MTR_2g035020 33.562 292 169 8 22 288 190 481 6.55e-38 140
MS.gene057369.t1 MTR_5g098960 32.526 289 177 7 5 288 171 446 6.83e-38 139
MS.gene057369.t1 MTR_7g070910 33.910 289 153 8 38 296 212 492 7.28e-38 140
MS.gene057369.t1 MTR_5g087620 35.897 273 154 8 40 291 224 496 8.10e-38 140
MS.gene057369.t1 MTR_5g029800 33.667 300 168 10 21 292 185 481 1.16e-37 139
MS.gene057369.t1 MTR_5g070040 36.559 279 146 9 25 286 200 464 3.57e-37 138
MS.gene057369.t1 MTR_6g035185 32.550 298 167 10 21 288 189 482 1.12e-36 137
MS.gene057369.t1 MTR_7g080900 31.788 302 175 11 8 291 170 458 2.72e-36 135
MS.gene057369.t1 MTR_7g102550 30.892 314 186 9 4 289 176 486 9.84e-36 134
MS.gene057369.t1 MTR_5g040030 31.058 293 179 6 22 292 200 491 1.44e-35 134
MS.gene057369.t1 MTR_8g044140 31.650 297 172 6 22 292 161 452 7.28e-35 131
MS.gene057369.t1 MTR_7g470610 36.493 211 115 4 38 235 69 273 5.23e-34 125
MS.gene057369.t1 MTR_7g070583 36.493 211 115 4 38 235 69 273 5.23e-34 125
MS.gene057369.t1 MTR_2g098430 32.990 291 164 12 15 286 199 477 1.87e-33 128
MS.gene057369.t1 MTR_4g118000 30.693 303 181 9 13 288 166 466 3.69e-33 127
MS.gene057369.t1 MTR_2g059240 34.155 284 168 9 17 289 194 469 5.21e-33 126
MS.gene057369.t1 MTR_4g117950 31.802 283 159 8 40 294 192 468 5.68e-33 126
MS.gene057369.t1 MTR_4g485590 34.956 226 138 4 15 234 162 384 1.22e-32 124
MS.gene057369.t1 MTR_7g070870 32.584 267 147 7 40 294 219 464 1.94e-32 125
MS.gene057369.t1 MTR_5g039900 28.571 294 183 6 22 292 198 487 6.64e-32 124
MS.gene057369.t1 MTR_5g016660 29.492 295 182 6 22 292 195 487 7.89e-32 123
MS.gene057369.t1 MTR_1g040310 30.479 292 179 7 22 292 199 487 9.02e-32 123
MS.gene057369.t1 MTR_7g071050 40.526 190 86 5 95 263 231 414 9.09e-32 122
MS.gene057369.t1 MTR_6g013435 27.119 295 161 6 3 289 59 307 1.02e-31 120
MS.gene057369.t1 MTR_8g009840 40.104 192 93 5 112 284 333 521 1.68e-31 123
MS.gene057369.t1 MTR_0536s0010 30.795 302 181 10 18 294 184 482 3.37e-31 122
MS.gene057369.t1 MTR_7g102520 33.106 293 161 10 33 296 210 496 3.39e-31 122
MS.gene057369.t1 MTR_8g068330 32.927 246 151 5 51 288 225 464 1.74e-30 119
MS.gene057369.t1 MTR_4g082810 34.862 218 131 4 10 219 179 393 9.93e-30 117
MS.gene057369.t1 MTR_5g027210 30.916 262 147 9 35 266 204 461 1.99e-29 117
MS.gene057369.t1 MTR_6g035295 27.946 297 193 5 16 292 193 488 2.00e-29 117
MS.gene057369.t1 MTR_3g009490 40.217 184 92 4 120 285 2 185 2.58e-29 110
MS.gene057369.t1 MTR_8g068340 37.113 194 115 3 97 284 272 464 3.46e-29 116
MS.gene057369.t1 MTR_6g014000 36.986 146 92 0 151 296 18 163 4.13e-29 116
MS.gene057369.t1 MTR_5g072850 32.937 252 142 6 40 289 156 382 4.22e-29 114
MS.gene057369.t1 MTR_4g082820 32.130 277 169 9 10 275 174 442 4.26e-29 115
MS.gene057369.t1 MTR_8g068360 36.139 202 116 5 97 291 271 466 4.66e-29 115
MS.gene057369.t1 MTR_7g039550 29.044 272 172 5 48 299 2 272 6.51e-29 112
MS.gene057369.t1 MTR_8g466240 32.197 264 159 7 43 293 202 458 4.77e-28 112
MS.gene057369.t1 MTR_1g107325 39.726 146 73 3 149 288 216 352 1.55e-27 110
MS.gene057369.t1 MTR_7g070760 33.051 236 117 6 8 234 1 204 1.57e-27 106
MS.gene057369.t1 MTR_4g059370 33.077 260 149 9 16 259 113 363 2.28e-27 110
MS.gene057369.t1 MTR_8g007565 32.520 246 138 8 33 261 204 438 5.06e-27 110
MS.gene057369.t1 MTR_8g071070 29.866 298 184 10 9 291 184 471 6.76e-27 109
MS.gene057369.t1 MTR_7g067120 35.749 207 114 7 93 292 239 433 9.16e-27 108
MS.gene057369.t1 MTR_7g067330 37.059 170 92 5 93 257 239 398 9.34e-27 108
MS.gene057369.t1 MTR_8g007650 32.520 246 138 8 33 261 204 438 9.51e-27 109
MS.gene057369.t1 MTR_6g013890 29.457 258 115 9 5 253 40 239 9.79e-27 105
MS.gene057369.t1 MTR_5g066410 32.917 240 141 7 33 257 176 410 1.19e-26 108
MS.gene057369.t1 MTR_0009s0240 32.184 261 161 9 40 291 208 461 4.86e-26 107
MS.gene057369.t1 MTR_7g070995 40.816 147 72 3 165 296 6 152 8.91e-26 100
MS.gene057369.t1 MTR_4g123553 31.839 223 140 5 48 263 219 436 9.50e-26 106
MS.gene057369.t1 MTR_6g078320 29.392 296 177 10 3 276 182 467 1.36e-25 106
MS.gene057369.t1 MTR_2g008226 32.301 226 135 7 50 266 232 448 4.45e-25 104
MS.gene057369.t1 MTR_7g080960 31.188 202 91 3 94 295 324 477 4.69e-24 101
MS.gene057369.t1 MTR_0536s0030 38.608 158 80 4 154 294 200 357 1.86e-23 99.0
MS.gene057369.t1 MTR_1g090270 30.041 243 149 9 28 259 204 436 1.91e-23 100
MS.gene057369.t1 MTR_5g090690 33.186 226 121 9 68 281 166 373 2.71e-23 98.6
MS.gene057369.t1 MTR_4g079270 30.645 248 159 8 46 288 215 454 7.97e-23 98.2
MS.gene057369.t1 MTR_6g042310 29.956 227 147 5 44 263 218 439 8.13e-23 98.2
MS.gene057369.t1 MTR_2g014900 28.682 258 168 6 43 294 211 458 1.37e-22 97.4
MS.gene057369.t1 MTR_2g046620 29.565 230 144 6 44 263 216 437 1.37e-22 97.4
MS.gene057369.t1 MTR_2g008225 30.000 230 143 6 44 263 220 441 1.90e-22 97.1
MS.gene057369.t1 MTR_2g008220 31.140 228 135 6 48 263 223 440 3.07e-22 96.7
MS.gene057369.t1 MTR_4g077960 29.825 228 142 6 48 265 196 415 4.95e-22 95.9
MS.gene057369.t1 MTR_4g079250 29.880 251 157 8 46 288 215 454 1.11e-21 94.7
MS.gene057369.t1 MTR_8g056740 29.098 244 162 6 24 260 93 332 2.79e-21 93.2
MS.gene057369.t1 MTR_3g435310 31.638 177 104 5 96 263 227 395 3.16e-21 93.2
MS.gene057369.t1 MTR_6g036650 29.204 226 142 6 48 263 229 446 1.54e-19 88.6
MS.gene057369.t1 MTR_2g083480 33.990 203 126 6 95 291 257 457 1.74e-18 85.5
MS.gene057369.t1 MTR_1g090280 31.183 186 113 7 117 291 133 314 2.85e-18 83.6
MS.gene057369.t1 MTR_2g083380 29.771 262 159 8 41 291 227 474 9.46e-17 80.5
MS.gene057369.t1 MTR_2g083430 33.889 180 107 6 96 265 258 435 5.89e-16 78.2
MS.gene057369.t1 MTR_2g083490 29.796 245 147 8 33 266 202 432 6.92e-15 75.1
MS.gene057369.t1 MTR_0475s0030 43.750 64 36 0 181 244 11 74 2.44e-14 68.2
MS.gene057369.t1 MTR_2g009740 44.048 84 41 2 94 177 201 278 1.27e-13 70.5
MS.gene057369.t1 MTR_2g083390 28.218 202 115 6 95 291 257 433 1.38e-12 68.2
MS.gene057369.t1 MTR_6g052375 29.310 174 104 4 8 174 31 192 1.53e-12 67.4
MS.gene057369.t1 MTR_2g083420 27.053 207 111 7 95 291 257 433 5.53e-12 66.2
MS.gene057369.t1 MTR_8g028755 29.167 168 84 5 91 257 97 230 9.06e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057369.t1 AT3G55700 56.803 294 121 3 1 293 167 455 1.69e-118 348
MS.gene057369.t1 AT3G55710 56.229 297 126 3 1 294 165 460 8.71e-116 342
MS.gene057369.t1 AT3G11340 56.207 290 125 1 2 291 160 447 4.46e-111 329
MS.gene057369.t1 AT5G05880 50.853 293 136 3 2 291 164 451 1.27e-104 313
MS.gene057369.t1 AT5G05890 50.345 290 142 1 2 291 168 455 2.26e-102 307
MS.gene057369.t1 AT5G05870 50.685 292 135 3 2 288 167 454 1.60e-101 305
MS.gene057369.t1 AT5G05860 50.690 290 141 1 2 291 163 450 4.25e-99 298
MS.gene057369.t1 AT5G59580 50.890 281 134 2 8 288 171 447 8.15e-99 298
MS.gene057369.t1 AT3G46680 48.772 285 142 2 2 286 167 447 1.97e-97 294
MS.gene057369.t1 AT3G46700 48.252 286 145 2 3 288 162 444 5.62e-97 293
MS.gene057369.t1 AT5G59590 49.466 281 138 2 8 288 173 449 1.33e-96 292
MS.gene057369.t1 AT3G46670 48.443 289 145 2 3 291 167 451 5.49e-94 285
MS.gene057369.t1 AT5G05900 51.211 289 129 5 2 288 169 447 3.55e-93 283
MS.gene057369.t1 AT3G46690 49.296 284 141 2 2 285 166 446 4.19e-92 281
MS.gene057369.t1 AT3G46720 50.709 282 128 3 4 285 167 437 5.86e-90 275
MS.gene057369.t1 AT3G46660 48.797 291 144 3 2 291 172 458 7.43e-90 275
MS.gene057369.t1 AT3G46650 46.207 290 152 2 2 291 150 435 2.29e-89 273
MS.gene057369.t1 AT5G38010 50.173 289 136 4 2 288 171 453 2.76e-87 268
MS.gene057369.t1 AT5G38040 47.945 292 136 6 3 288 168 449 1.64e-82 256
MS.gene057369.t1 AT2G26480 43.448 290 161 3 1 289 159 446 2.08e-82 256
MS.gene057369.t1 AT1G22360 38.488 291 163 7 11 289 192 478 3.06e-67 218
MS.gene057369.t1 AT1G22380 39.384 292 159 7 11 289 195 481 1.66e-66 216
MS.gene057369.t1 AT1G22400 37.908 306 168 8 1 289 182 482 2.73e-65 213
MS.gene057369.t1 AT1G22340 37.586 290 168 6 11 289 195 482 8.61e-62 203
MS.gene057369.t1 AT1G22360 36.770 291 156 8 11 289 192 466 2.16e-59 197
MS.gene057369.t1 AT1G78270 35.294 306 179 7 5 296 188 488 9.05e-58 193
MS.gene057369.t1 AT5G37950 49.758 207 96 4 2 206 137 337 2.35e-56 185
MS.gene057369.t1 AT1G22370 37.943 282 160 5 11 280 20 298 3.76e-56 184
MS.gene057369.t1 AT5G37950 49.758 207 96 4 2 206 143 343 3.91e-56 185
MS.gene057369.t1 AT1G22370 37.586 290 167 5 11 289 190 476 4.61e-54 183
MS.gene057369.t1 AT2G43820 36.808 307 167 8 1 290 152 448 4.90e-54 182
MS.gene057369.t1 AT5G26310 35.855 304 162 7 10 287 170 466 9.53e-53 179
MS.gene057369.t1 AT2G31750 34.899 298 170 7 8 289 166 455 1.12e-52 179
MS.gene057369.t1 AT2G31750 34.899 298 170 7 8 289 166 455 2.27e-52 179
MS.gene057369.t1 AT1G05680 37.543 293 161 6 8 286 166 450 2.29e-52 178
MS.gene057369.t1 AT4G01070 38.305 295 158 9 10 286 176 464 4.29e-52 178
MS.gene057369.t1 AT2G31790 36.000 300 159 7 8 286 167 454 6.93e-52 177
MS.gene057369.t1 AT5G17040 33.221 298 183 7 1 291 52 340 1.02e-50 171
MS.gene057369.t1 AT2G43840 36.184 304 161 10 5 288 156 446 1.61e-50 173
MS.gene057369.t1 AT2G43840 35.880 301 166 9 5 288 156 446 1.75e-50 173
MS.gene057369.t1 AT1G05675 35.690 297 161 6 8 286 166 450 2.04e-50 173
MS.gene057369.t1 AT2G36970 36.882 263 158 5 28 288 214 470 2.57e-50 173
MS.gene057369.t1 AT3G50740 37.755 294 137 9 27 287 192 472 3.70e-50 173
MS.gene057369.t1 AT2G23260 36.610 295 166 7 8 288 166 453 4.21e-50 172
MS.gene057369.t1 AT5G17040 32.990 291 182 6 5 291 161 442 8.91e-50 171
MS.gene057369.t1 AT5G17050 33.893 298 179 7 1 291 173 459 1.06e-49 171
MS.gene057369.t1 AT5G17030 34.783 253 156 4 40 291 214 458 1.90e-49 170
MS.gene057369.t1 AT5G66690 37.500 280 142 8 25 279 185 456 3.49e-49 170
MS.gene057369.t1 AT3G16520 36.177 293 166 9 5 285 173 456 3.56e-49 170
MS.gene057369.t1 AT4G15500 36.264 273 157 5 35 296 204 470 5.56e-49 169
MS.gene057369.t1 AT3G21560 33.670 297 179 6 5 288 181 472 6.46e-49 170
MS.gene057369.t1 AT1G01420 36.842 285 151 9 20 284 190 465 1.08e-48 169
MS.gene057369.t1 AT1G01420 36.842 285 151 9 20 284 187 462 1.19e-48 169
MS.gene057369.t1 AT4G15490 36.213 301 163 11 8 287 177 469 3.06e-48 167
MS.gene057369.t1 AT2G23250 35.862 290 170 7 8 288 153 435 8.78e-48 166
MS.gene057369.t1 AT4G15550 37.162 296 160 9 8 287 187 472 4.55e-47 164
MS.gene057369.t1 AT2G30140 34.551 301 167 6 2 288 167 451 8.67e-47 163
MS.gene057369.t1 AT2G30140 34.551 301 167 6 2 288 166 450 9.75e-47 163
MS.gene057369.t1 AT1G05530 35.216 301 173 7 7 289 159 455 6.07e-46 161
MS.gene057369.t1 AT1G01390 38.667 300 150 12 10 285 176 465 6.51e-46 161
MS.gene057369.t1 AT3G16520 35.943 281 159 9 5 273 173 444 9.03e-46 160
MS.gene057369.t1 AT1G01390 38.667 300 150 12 10 285 193 482 9.81e-46 161
MS.gene057369.t1 AT1G05560 35.570 298 171 6 7 288 159 451 9.82e-46 160
MS.gene057369.t1 AT2G36780 38.235 272 146 8 41 291 221 491 1.07e-45 161
MS.gene057369.t1 AT3G16520 35.943 281 159 9 5 273 173 444 1.12e-45 160
MS.gene057369.t1 AT1G05560 35.570 298 171 6 7 288 209 501 1.59e-45 161
MS.gene057369.t1 AT1G30530 34.219 301 174 8 1 291 167 453 1.59e-45 160
MS.gene057369.t1 AT2G36760 36.972 284 155 8 35 296 215 496 3.15e-45 160
MS.gene057369.t1 AT2G36750 37.956 274 148 8 41 293 216 488 7.86e-45 159
MS.gene057369.t1 AT2G36770 37.367 281 150 9 34 289 210 489 1.78e-44 158
MS.gene057369.t1 AT3G21760 35.738 305 160 10 10 288 186 480 2.01e-44 157
MS.gene057369.t1 AT4G15480 33.452 281 174 5 8 277 189 467 3.86e-44 157
MS.gene057369.t1 AT2G30150 31.457 302 176 7 1 288 152 436 4.66e-44 155
MS.gene057369.t1 AT4G15280 35.738 305 160 10 10 289 181 474 6.76e-44 156
MS.gene057369.t1 AT2G28080 31.295 278 174 7 20 288 206 475 6.78e-44 156
MS.gene057369.t1 AT2G30150 31.148 305 179 7 1 291 168 455 7.27e-44 155
MS.gene057369.t1 AT4G36770 33.453 278 151 6 20 271 177 446 7.87e-44 155
MS.gene057369.t1 AT4G15280 35.738 305 160 10 10 289 213 506 1.29e-43 156
MS.gene057369.t1 AT4G15260 33.770 305 165 9 10 289 63 355 3.10e-43 152
MS.gene057369.t1 AT3G53160 35.357 280 155 10 33 289 207 483 1.34e-42 153
MS.gene057369.t1 AT2G15490 34.831 267 151 6 41 288 218 480 1.55e-42 152
MS.gene057369.t1 AT4G34131 35.018 277 157 7 33 290 209 481 2.03e-42 152
MS.gene057369.t1 AT2G15490 34.848 264 152 6 41 288 218 477 3.04e-42 152
MS.gene057369.t1 AT2G36800 34.643 280 159 8 34 291 213 490 1.48e-41 150
MS.gene057369.t1 AT2G15480 33.091 275 162 6 33 288 209 480 1.49e-41 150
MS.gene057369.t1 AT3G21790 35.461 282 148 7 34 288 204 478 2.41e-41 149
MS.gene057369.t1 AT3G21800 35.759 316 163 10 3 288 170 475 4.21e-41 149
MS.gene057369.t1 AT3G21780 35.526 304 160 9 10 288 176 468 5.60e-41 148
MS.gene057369.t1 AT2G18560 34.586 266 146 8 37 281 111 369 1.83e-40 145
MS.gene057369.t1 AT1G07250 34.343 297 173 8 10 294 192 478 3.39e-40 146
MS.gene057369.t1 AT2G36790 34.237 295 170 7 24 296 203 495 3.48e-40 146
MS.gene057369.t1 AT1G24100 33.333 303 174 8 5 288 165 458 1.36e-39 144
MS.gene057369.t1 AT1G07260 35.374 294 161 10 10 285 190 472 1.47e-39 144
MS.gene057369.t1 AT2G15480 31.930 285 162 7 33 288 209 490 2.59e-39 144
MS.gene057369.t1 AT4G14090 34.130 293 169 9 8 287 173 454 3.49e-39 143
MS.gene057369.t1 AT2G18570 33.455 275 155 7 28 281 192 459 5.46e-39 142
MS.gene057369.t1 AT3G22250 33.571 280 155 8 9 267 171 440 7.51e-39 142
MS.gene057369.t1 AT4G34138 32.967 273 161 7 36 292 216 482 7.98e-39 142
MS.gene057369.t1 AT3G02100 33.955 268 156 7 27 290 211 461 1.26e-38 142
MS.gene057369.t1 AT2G29740 34.247 292 163 9 10 284 195 474 1.33e-38 142
MS.gene057369.t1 AT1G10400 32.841 271 161 8 28 288 203 462 4.01e-37 137
MS.gene057369.t1 AT3G21750 32.491 277 154 5 39 289 200 469 4.18e-37 137
MS.gene057369.t1 AT2G29730 30.272 294 184 7 10 292 183 466 5.02e-37 137
MS.gene057369.t1 AT4G34135 32.852 277 164 5 33 290 210 483 1.31e-36 136
MS.gene057369.t1 AT5G14860 31.833 311 178 9 2 288 175 475 1.48e-36 136
MS.gene057369.t1 AT2G16890 32.573 307 180 8 4 294 178 473 1.35e-35 134
MS.gene057369.t1 AT2G29710 29.831 295 187 7 10 293 182 467 7.45e-35 131
MS.gene057369.t1 AT1G07240 31.183 279 168 6 28 289 205 476 1.37e-34 131
MS.gene057369.t1 AT2G29750 31.399 293 175 9 10 289 195 474 4.04e-33 127
MS.gene057369.t1 AT1G73880 32.946 258 157 6 43 291 219 469 5.16e-33 126
MS.gene057369.t1 AT5G12890 34.701 268 150 12 43 292 225 485 1.06e-32 126
MS.gene057369.t1 AT3G53150 29.697 330 184 12 4 289 185 510 1.39e-32 126
MS.gene057369.t1 AT1G06000 29.655 290 190 7 10 288 147 433 8.95e-29 114
MS.gene057369.t1 AT5G03490 32.549 255 151 8 41 287 220 461 3.95e-28 113
MS.gene057369.t1 AT5G65550 32.365 241 149 6 32 266 208 440 1.42e-26 108
MS.gene057369.t1 AT1G51210 31.441 229 140 6 41 263 215 432 1.46e-26 108
MS.gene057369.t1 AT2G16890 31.873 251 150 7 4 246 178 415 2.21e-26 107
MS.gene057369.t1 AT5G49690 30.738 244 143 8 32 265 205 432 1.99e-25 105
MS.gene057369.t1 AT2G22590 34.848 198 118 5 97 286 274 468 1.87e-24 102
MS.gene057369.t1 AT5G54060 30.970 268 167 8 35 294 211 468 6.67e-24 101
MS.gene057369.t1 AT4G27570 31.839 223 130 8 90 297 237 452 3.88e-22 96.3
MS.gene057369.t1 AT4G27560 31.696 224 131 8 90 298 237 453 9.45e-22 95.1
MS.gene057369.t1 AT1G64910 29.187 209 134 6 97 297 244 446 6.98e-21 92.4
MS.gene057369.t1 AT5G53990 28.365 208 135 6 97 296 244 445 9.18e-19 86.3
MS.gene057369.t1 AT5G54010 30.508 177 113 5 97 265 250 424 4.20e-18 84.3
MS.gene057369.t1 AT2G22930 26.568 271 178 9 27 288 179 437 4.88e-18 84.3
MS.gene057369.t1 AT3G29630 29.703 202 127 6 96 288 245 440 6.50e-18 84.0
MS.gene057369.t1 AT3G29630 29.703 202 127 6 96 288 219 414 7.56e-18 83.6
MS.gene057369.t1 AT4G01070 35.443 158 85 5 28 173 194 346 2.96e-17 81.3
MS.gene057369.t1 AT1G64920 26.259 278 172 9 26 284 178 441 2.69e-16 79.3
MS.gene057369.t1 AT4G09500 31.176 170 107 5 104 265 251 418 2.76e-16 79.0
MS.gene057369.t1 AT4G09500 31.176 170 107 5 104 265 226 393 3.06e-16 79.0
MS.gene057369.t1 AT1G50580 27.670 206 139 5 97 294 245 448 7.39e-16 77.8

Find 77 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAATTCTACGAGCTTAT+TGG 0.155567 3.1:+57062221 MS.gene057369:CDS
AAGTGGGTTCTTAGAAAATT+TGG 0.172848 3.1:+57062443 MS.gene057369:CDS
CATACTTGGCATTGATCTTT+TGG 0.180248 3.1:-57062617 None:intergenic
AGAAATCCTCGGGGATTATT+TGG 0.186890 3.1:+57062094 MS.gene057369:CDS
CAGACAAAACCTGCATTTCT+TGG 0.236067 3.1:+57062247 MS.gene057369:CDS
CCAAACATCACTTGCATACT+TGG 0.275753 3.1:-57062631 None:intergenic
ATGATATGTATGCCATCTTT+TGG 0.300492 3.1:+57062591 MS.gene057369:CDS
TTCCACAGATACTCTCTTGC+TGG 0.318446 3.1:+57062198 MS.gene057369:CDS
ATCCTGCGGTTGGAGCATTT+TGG 0.319308 3.1:+57062517 MS.gene057369:CDS
TTACAGTTTCCTTGATTCCT+TGG 0.331333 3.1:+57062809 MS.gene057369:CDS
ATCTGTGGAAAGGGCCTATA+GGG 0.368890 3.1:-57062185 None:intergenic
AGTGGGTTCTTAGAAAATTT+GGG 0.369359 3.1:+57062444 MS.gene057369:CDS
AATAAGCGAGGCAGAGTTCT+TGG 0.371844 3.1:+57062326 MS.gene057369:CDS
AAAGAGGGTATATTGTGAAA+TGG 0.375541 3.1:+57062469 MS.gene057369:CDS
AGTGTTGTTTATGTGAGTTT+TGG 0.377681 3.1:+57062291 MS.gene057369:CDS
TATCTGTGGAAAGGGCCTAT+AGG 0.398369 3.1:-57062186 None:intergenic
GCAAGTGATGTTTGGAAGGT+TGG 0.401026 3.1:+57062639 MS.gene057369:CDS
TTTCCTGTGGGCGATTCGAC+CGG 0.409681 3.1:+57062383 MS.gene057369:CDS
AGAGTTCTTGGAGATAGCTT+GGG 0.419118 3.1:+57062338 MS.gene057369:CDS
GCTAATGTTTGTTTGAAAGA+AGG 0.421594 3.1:+57062777 MS.gene057369:CDS
CCAAGTATGCAAGTGATGTT+TGG 0.426349 3.1:+57062631 MS.gene057369:CDS
GAAGGTAATTCGAAAACTAA+TGG 0.431623 3.1:+57062701 MS.gene057369:CDS
TTGGAACACCTTTGAAGAGT+TGG 0.440155 3.1:+57062113 MS.gene057369:CDS
AAAGATGGCATACATATCAT+TGG 0.440902 3.1:-57062588 None:intergenic
CAGAGTTCTTGGAGATAGCT+TGG 0.443688 3.1:+57062337 MS.gene057369:CDS
TCTGTGCCAATATACCCTAT+AGG 0.445664 3.1:+57062171 MS.gene057369:CDS
AAGAGGGTATATTGTGAAAT+GGG 0.448054 3.1:+57062470 MS.gene057369:CDS
TTCCTGTGGGCGATTCGACC+GGG 0.449702 3.1:+57062384 MS.gene057369:CDS
AAAGGGCCTATAGGGTATAT+TGG 0.450935 3.1:-57062177 None:intergenic
TGTCAAGAATTTGAAAGAAA+AGG 0.456790 3.1:+57062755 MS.gene057369:CDS
TGCTTCAGCACTTGCTCTTG+AGG 0.457695 3.1:-57062495 None:intergenic
TTAGAAAATTTGGGAGAAAG+AGG 0.459729 3.1:+57062453 MS.gene057369:CDS
AAACTAATGGTTGGAGATGA+AGG 0.473456 3.1:+57062714 MS.gene057369:CDS
TTTGTCTAACCAAGAAATGC+AGG 0.485542 3.1:-57062256 None:intergenic
CAAGAGAGTATCTGTGGAAA+GGG 0.487251 3.1:-57062194 None:intergenic
TCCGATCCGCGGATTGTCCC+CGG 0.491629 3.1:-57062402 None:intergenic
GAGTTCTTGGAGATAGCTTG+GGG 0.494384 3.1:+57062339 MS.gene057369:CDS
TAGAAAATTTGGGAGAAAGA+GGG 0.494998 3.1:+57062454 MS.gene057369:CDS
GGCTTGAACCATTGCCAAGT+GGG 0.497443 3.1:+57062427 MS.gene057369:CDS
TTTCACTAACCAAGGAATCA+AGG 0.498847 3.1:-57062818 None:intergenic
GTGCTGAAGCATCCTGCGGT+TGG 0.511431 3.1:+57062507 MS.gene057369:CDS
GATGAGTGCAAGAAATCCTC+GGG 0.513220 3.1:+57062084 MS.gene057369:CDS
ACTAGTTTGTAAAATGCCTC+AGG 0.516788 3.1:-57062048 None:intergenic
GGAAGGTCTTTCACTTTGAG+TGG 0.523714 3.1:-57062006 None:intergenic
GTAATTCGAAAACTAATGGT+TGG 0.531429 3.1:+57062705 MS.gene057369:CDS
TGAGAGAGGAGAGATTGAGA+AGG 0.538693 3.1:+57062683 MS.gene057369:CDS
AATGTTTGTTTGAAAGAAGG+TGG 0.541615 3.1:+57062780 MS.gene057369:CDS
CGATGAGTGCAAGAAATCCT+CGG 0.543342 3.1:+57062083 MS.gene057369:CDS
GCAAGAGAGTATCTGTGGAA+AGG 0.543719 3.1:-57062195 None:intergenic
ACCGGGGACAATCCGCGGAT+CGG 0.551844 3.1:+57062401 MS.gene057369:CDS
TCTAAGAACCCACTTGGCAA+TGG 0.552340 3.1:-57062435 None:intergenic
GGTCGAATCGCCCACAGGAA+AGG 0.554283 3.1:-57062381 None:intergenic
ATCTCGAATGGAGGAAGCTG+TGG 0.567911 3.1:+57061972 None:intergenic
GTCCAAAATGCTCCAACCGC+AGG 0.569206 3.1:-57062519 None:intergenic
TCCCCGGTCGAATCGCCCAC+AGG 0.571099 3.1:-57062386 None:intergenic
GGACAATCCGCGGATCGGAA+TGG 0.573065 3.1:+57062406 MS.gene057369:CDS
AGGTCTTTCACTTTGAGTGG+TGG 0.577800 3.1:-57062003 None:intergenic
CGACAATATTTCACTAACCA+AGG 0.578794 3.1:-57062826 None:intergenic
ATTCGACCGGGGACAATCCG+CGG 0.586643 3.1:+57062396 MS.gene057369:CDS
TCGAATGGAGGAAGCTGTGG+AGG 0.595937 3.1:+57061975 None:intergenic
TCCTGTGGGCGATTCGACCG+GGG 0.601340 3.1:+57062385 MS.gene057369:CDS
AGATGATTCCAACTCTTCAA+AGG 0.611022 3.1:-57062121 None:intergenic
ACAGCAATCAACCTTTCCTG+TGG 0.613913 3.1:+57062370 MS.gene057369:CDS
AGCCAGCAAGAGAGTATCTG+TGG 0.615864 3.1:-57062200 None:intergenic
CAGCAATCAACCTTTCCTGT+GGG 0.616158 3.1:+57062371 MS.gene057369:CDS
TAATGGTTGGAATTCAACGT+TGG 0.617257 3.1:+57062545 MS.gene057369:CDS
GTTCAAGCCATTCCGATCCG+CGG 0.623462 3.1:-57062413 None:intergenic
TTAGAGAGTAAGCTTGAGAG+AGG 0.634076 3.1:+57062669 MS.gene057369:CDS
GTATGCAAGTGATGTTTGGA+AGG 0.637152 3.1:+57062635 MS.gene057369:CDS
TGGCTTGAACCATTGCCAAG+TGG 0.661540 3.1:+57062426 MS.gene057369:CDS
GTTTCAGTCAAAAGAACCTG+AGG 0.686260 3.1:+57062032 MS.gene057369:CDS
GAGTATTGTAGCAATAAGCG+AGG 0.702135 3.1:+57062314 MS.gene057369:CDS
GCAAGTGCTGAAGCATCCTG+CGG 0.705190 3.1:+57062503 MS.gene057369:CDS
GGTGTTCCAAATAATCCCCG+AGG 0.736370 3.1:-57062100 None:intergenic
AGTTCTTGGAGATAGCTTGG+GGG 0.753471 3.1:+57062340 MS.gene057369:CDS
ACGTTGGAGAGTGTATGTGA+AGG 0.776339 3.1:+57062561 MS.gene057369:CDS
ATGAGTGCAAGAAATCCTCG+GGG 0.786157 3.1:+57062085 MS.gene057369:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TGTCAAGAATTTGAAAGAAA+AGG + chr3.1:57062755-57062774 MS.gene057369:CDS 25.0%
AAAGATGGCATACATATCAT+TGG - chr3.1:57062591-57062610 None:intergenic 30.0%
AATGTTTGTTTGAAAGAAGG+TGG + chr3.1:57062780-57062799 MS.gene057369:CDS 30.0%
ATATTGGCACAGAAAAATCT+TGG - chr3.1:57062164-57062183 None:intergenic 30.0%
GAAGGTAATTCGAAAACTAA+TGG + chr3.1:57062701-57062720 MS.gene057369:CDS 30.0%
GCTAATGTTTGTTTGAAAGA+AGG + chr3.1:57062777-57062796 MS.gene057369:CDS 30.0%
GTAATTCGAAAACTAATGGT+TGG + chr3.1:57062705-57062724 MS.gene057369:CDS 30.0%
TAGAAAATTTGGGAGAAAGA+GGG + chr3.1:57062454-57062473 MS.gene057369:CDS 30.0%
TTAGAAAATTTGGGAGAAAG+AGG + chr3.1:57062453-57062472 MS.gene057369:CDS 30.0%
! AAAGAGGGTATATTGTGAAA+TGG + chr3.1:57062469-57062488 MS.gene057369:CDS 30.0%
! AAGAGGGTATATTGTGAAAT+GGG + chr3.1:57062470-57062489 MS.gene057369:CDS 30.0%
! AAGTGGGTTCTTAGAAAATT+TGG + chr3.1:57062443-57062462 MS.gene057369:CDS 30.0%
! AGTGGGTTCTTAGAAAATTT+GGG + chr3.1:57062444-57062463 MS.gene057369:CDS 30.0%
! ATGATATGTATGCCATCTTT+TGG + chr3.1:57062591-57062610 MS.gene057369:CDS 30.0%
!! AAATTTTCTAAGAACCCACT+TGG - chr3.1:57062444-57062463 None:intergenic 30.0%
!!! AGTGTTGTTTATGTGAGTTT+TGG + chr3.1:57062291-57062310 MS.gene057369:CDS 30.0%
!!! GTGTTGTTTATGTGAGTTTT+GGG + chr3.1:57062292-57062311 MS.gene057369:CDS 30.0%
AAACTAATGGTTGGAGATGA+AGG + chr3.1:57062714-57062733 MS.gene057369:CDS 35.0%
AGATGATTCCAACTCTTCAA+AGG - chr3.1:57062124-57062143 None:intergenic 35.0%
CGACAATATTTCACTAACCA+AGG - chr3.1:57062829-57062848 None:intergenic 35.0%
CTCAAATTCTACGAGCTTAT+TGG + chr3.1:57062221-57062240 MS.gene057369:CDS 35.0%
TAATGGTTGGAATTCAACGT+TGG + chr3.1:57062545-57062564 MS.gene057369:CDS 35.0%
TTACAGTTTCCTTGATTCCT+TGG + chr3.1:57062809-57062828 MS.gene057369:CDS 35.0%
TTTCACTAACCAAGGAATCA+AGG - chr3.1:57062821-57062840 None:intergenic 35.0%
TTTGTCTAACCAAGAAATGC+AGG - chr3.1:57062259-57062278 None:intergenic 35.0%
! ACTAGTTTGTAAAATGCCTC+AGG - chr3.1:57062051-57062070 None:intergenic 35.0%
! ATCTTTTGGTCTCCAAAAGA+TGG - chr3.1:57062606-57062625 None:intergenic 35.0%
! CATTTTGGACTCATAATGGT+TGG + chr3.1:57062532-57062551 MS.gene057369:CDS 35.0%
!!! CATACTTGGCATTGATCTTT+TGG - chr3.1:57062620-57062639 None:intergenic 35.0%
AAAGGGCCTATAGGGTATAT+TGG - chr3.1:57062180-57062199 None:intergenic 40.0%
AGAAATCCTCGGGGATTATT+TGG + chr3.1:57062094-57062113 MS.gene057369:CDS 40.0%
AGAGTTCTTGGAGATAGCTT+GGG + chr3.1:57062338-57062357 MS.gene057369:CDS 40.0%
CAGACAAAACCTGCATTTCT+TGG + chr3.1:57062247-57062266 MS.gene057369:CDS 40.0%
CCAAACATCACTTGCATACT+TGG - chr3.1:57062634-57062653 None:intergenic 40.0%
CCAAGTATGCAAGTGATGTT+TGG + chr3.1:57062631-57062650 MS.gene057369:CDS 40.0%
GTATGCAAGTGATGTTTGGA+AGG + chr3.1:57062635-57062654 MS.gene057369:CDS 40.0%
GTTTCAGTCAAAAGAACCTG+AGG + chr3.1:57062032-57062051 MS.gene057369:CDS 40.0%
TCTGTGCCAATATACCCTAT+AGG + chr3.1:57062171-57062190 MS.gene057369:CDS 40.0%
TTAGAGAGTAAGCTTGAGAG+AGG + chr3.1:57062669-57062688 MS.gene057369:CDS 40.0%
! GAGTATTGTAGCAATAAGCG+AGG + chr3.1:57062314-57062333 MS.gene057369:CDS 40.0%
! TTGGAACACCTTTGAAGAGT+TGG + chr3.1:57062113-57062132 MS.gene057369:CDS 40.0%
!! CAAGAAATGCAGGTTTTGTC+TGG - chr3.1:57062249-57062268 None:intergenic 40.0%
!! CAAGAGAGTATCTGTGGAAA+GGG - chr3.1:57062197-57062216 None:intergenic 40.0%
!! CTTTTGACTGAAACACAGGA+AGG - chr3.1:57062026-57062045 None:intergenic 40.0%
!! GGAGCATTTTGGACTCATAA+TGG + chr3.1:57062528-57062547 MS.gene057369:CDS 40.0%
!! GGTTCTTTTGACTGAAACAC+AGG - chr3.1:57062030-57062049 None:intergenic 40.0%
AATAAGCGAGGCAGAGTTCT+TGG + chr3.1:57062326-57062345 MS.gene057369:CDS 45.0%
ACAGCAATCAACCTTTCCTG+TGG + chr3.1:57062370-57062389 MS.gene057369:CDS 45.0%
AGGTCTTTCACTTTGAGTGG+TGG - chr3.1:57062006-57062025 None:intergenic 45.0%
AGTTCTTGGAGATAGCTTGG+GGG + chr3.1:57062340-57062359 MS.gene057369:CDS 45.0%
ATCTGTGGAAAGGGCCTATA+GGG - chr3.1:57062188-57062207 None:intergenic 45.0%
ATGAGTGCAAGAAATCCTCG+GGG + chr3.1:57062085-57062104 MS.gene057369:CDS 45.0%
CAGAGTTCTTGGAGATAGCT+TGG + chr3.1:57062337-57062356 MS.gene057369:CDS 45.0%
CAGCAATCAACCTTTCCTGT+GGG + chr3.1:57062371-57062390 MS.gene057369:CDS 45.0%
CGATGAGTGCAAGAAATCCT+CGG + chr3.1:57062083-57062102 MS.gene057369:CDS 45.0%
GAGTTCTTGGAGATAGCTTG+GGG + chr3.1:57062339-57062358 MS.gene057369:CDS 45.0%
GATGAGTGCAAGAAATCCTC+GGG + chr3.1:57062084-57062103 MS.gene057369:CDS 45.0%
GCAAGTGATGTTTGGAAGGT+TGG + chr3.1:57062639-57062658 MS.gene057369:CDS 45.0%
GGAAGGTCTTTCACTTTGAG+TGG - chr3.1:57062009-57062028 None:intergenic 45.0%
TATCTGTGGAAAGGGCCTAT+AGG - chr3.1:57062189-57062208 None:intergenic 45.0%
TCTAAGAACCCACTTGGCAA+TGG - chr3.1:57062438-57062457 None:intergenic 45.0%
TGAGAGAGGAGAGATTGAGA+AGG + chr3.1:57062683-57062702 MS.gene057369:CDS 45.0%
TTCCACAGATACTCTCTTGC+TGG + chr3.1:57062198-57062217 MS.gene057369:CDS 45.0%
! ACGTTGGAGAGTGTATGTGA+AGG + chr3.1:57062561-57062580 MS.gene057369:CDS 45.0%
!! GCAAGAGAGTATCTGTGGAA+AGG - chr3.1:57062198-57062217 None:intergenic 45.0%
GGCTTGAACCATTGCCAAGT+GGG + chr3.1:57062427-57062446 MS.gene057369:CDS 50.0%
GGTGTTCCAAATAATCCCCG+AGG - chr3.1:57062103-57062122 None:intergenic 50.0%
TGCTTCAGCACTTGCTCTTG+AGG - chr3.1:57062498-57062517 None:intergenic 50.0%
TGGCTTGAACCATTGCCAAG+TGG + chr3.1:57062426-57062445 MS.gene057369:CDS 50.0%
!! AGCCAGCAAGAGAGTATCTG+TGG - chr3.1:57062203-57062222 None:intergenic 50.0%
!! ATCCTGCGGTTGGAGCATTT+TGG + chr3.1:57062517-57062536 MS.gene057369:CDS 50.0%
GTCCAAAATGCTCCAACCGC+AGG - chr3.1:57062522-57062541 None:intergenic 55.0%
GTTCAAGCCATTCCGATCCG+CGG - chr3.1:57062416-57062435 None:intergenic 55.0%
TTTCCTGTGGGCGATTCGAC+CGG + chr3.1:57062383-57062402 MS.gene057369:CDS 55.0%
!! GCAAGTGCTGAAGCATCCTG+CGG + chr3.1:57062503-57062522 MS.gene057369:CDS 55.0%
ATTCGACCGGGGACAATCCG+CGG + chr3.1:57062396-57062415 MS.gene057369:CDS 60.0%
GGACAATCCGCGGATCGGAA+TGG + chr3.1:57062406-57062425 MS.gene057369:CDS 60.0%
GGTCGAATCGCCCACAGGAA+AGG - chr3.1:57062384-57062403 None:intergenic 60.0%
TTCCTGTGGGCGATTCGACC+GGG + chr3.1:57062384-57062403 MS.gene057369:CDS 60.0%
! GTGCTGAAGCATCCTGCGGT+TGG + chr3.1:57062507-57062526 MS.gene057369:CDS 60.0%
ACCGGGGACAATCCGCGGAT+CGG + chr3.1:57062401-57062420 MS.gene057369:CDS 65.0%
TCCTGTGGGCGATTCGACCG+GGG + chr3.1:57062385-57062404 MS.gene057369:CDS 65.0%
! TCCGATCCGCGGATTGTCCC+CGG - chr3.1:57062405-57062424 None:intergenic 65.0%
TCCCCGGTCGAATCGCCCAC+AGG - chr3.1:57062389-57062408 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 57061979 57062878 57061979 ID=MS.gene057369
chr3.1 mRNA 57061979 57062878 57061979 ID=MS.gene057369.t1;Parent=MS.gene057369
chr3.1 exon 57061979 57062878 57061979 ID=MS.gene057369.t1.exon1;Parent=MS.gene057369.t1
chr3.1 CDS 57061979 57062878 57061979 ID=cds.MS.gene057369.t1;Parent=MS.gene057369.t1
Gene Sequence

>MS.gene057369

ATGGAGGAAGCTGTGGAGGATCTTCCACCACTCAAAGTGAAAGACCTTCCTGTGTTTCAGTCAAAAGAACCTGAGGCATTTTACAAACTAGTTTGTCGCTTTATCGATGAGTGCAAGAAATCCTCGGGGATTATTTGGAACACCTTTGAAGAGTTGGAATCATCTGCATTAACAAAATTGCGCCAAGATTTTTCTGTGCCAATATACCCTATAGGCCCTTTCCACAGATACTCTCTTGCTGGCTCAAATTCTACGAGCTTATTGGCACCAGACAAAACCTGCATTTCTTGGTTAGACAAACAAGAACATAAAAGTGTTGTTTATGTGAGTTTTGGGAGTATTGTAGCAATAAGCGAGGCAGAGTTCTTGGAGATAGCTTGGGGGTTAGTCAACAGCAATCAACCTTTCCTGTGGGCGATTCGACCGGGGACAATCCGCGGATCGGAATGGCTTGAACCATTGCCAAGTGGGTTCTTAGAAAATTTGGGAGAAAGAGGGTATATTGTGAAATGGGCTCCTCAAGAGCAAGTGCTGAAGCATCCTGCGGTTGGAGCATTTTGGACTCATAATGGTTGGAATTCAACGTTGGAGAGTGTATGTGAAGGTGTTCCAATGATATGTATGCCATCTTTTGGAGACCAAAAGATCAATGCCAAGTATGCAAGTGATGTTTGGAAGGTTGGAGTGCAGTTAGAGAGTAAGCTTGAGAGAGGAGAGATTGAGAAGGTAATTCGAAAACTAATGGTTGGAGATGAAGGTAATGAGATTAGAGAGAATGTCAAGAATTTGAAAGAAAAGGCTAATGTTTGTTTGAAAGAAGGTGGTTCTTCTTACAGTTTCCTTGATTCCTTGGTTAGTGAAATATTGTCGCTTAAATCTTCTACATCTAGAGCTCACTGA
Protein sequence

>MS.gene057369.t1

MEEAVEDLPPLKVKDLPVFQSKEPEAFYKLVCRFIDECKKSSGIIWNTFEELESSALTKLRQDFSVPIYPIGPFHRYSLAGSNSTSLLAPDKTCISWLDKQEHKSVVYVSFGSIVAISEAEFLEIAWGLVNSNQPFLWAIRPGTIRGSEWLEPLPSGFLENLGERGYIVKWAPQEQVLKHPAVGAFWTHNGWNSTLESVCEGVPMICMPSFGDQKINAKYASDVWKVGVQLESKLERGEIEKVIRKLMVGDEGNEIRENVKNLKEKANVCLKEGGSSYSFLDSLVSEILSLKSSTSRAH