Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022258.t1 | XP_013461053.1 | 97.6 | 415 | 10 | 0 | 1 | 415 | 1 | 415 | 2.10E-213 | 751.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022258.t1 | Q86HG0 | 46.5 | 413 | 206 | 3 | 10 | 415 | 8 | 412 | 1.3e-86 | 321.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022258.t1 | A0A072UZU5 | 97.6 | 415 | 10 | 0 | 1 | 415 | 1 | 415 | 1.5e-213 | 751.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene50130 | MS.gene022258 | PPI |
| MS.gene63503 | MS.gene022258 | PPI |
| MS.gene008143 | MS.gene022258 | PPI |
| MS.gene63291 | MS.gene022258 | PPI |
| MS.gene022258 | MS.gene32515 | PPI |
| MS.gene29519 | MS.gene022258 | PPI |
| MS.gene62173 | MS.gene022258 | PPI |
| MS.gene022258 | MS.gene29520 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022258.t1 | MTR_3g078570 | 99.036 | 415 | 4 | 0 | 1 | 415 | 1 | 415 | 0.0 | 845 |
| MS.gene022258.t1 | MTR_3g078570 | 98.645 | 369 | 5 | 0 | 1 | 369 | 1 | 369 | 0.0 | 754 |
| MS.gene022258.t1 | MTR_6g008840 | 81.796 | 412 | 75 | 0 | 4 | 415 | 3 | 414 | 0.0 | 717 |
| MS.gene022258.t1 | MTR_4g071670 | 72.458 | 236 | 47 | 1 | 180 | 415 | 3 | 220 | 1.64e-121 | 352 |
| MS.gene022258.t1 | MTR_3g069070 | 32.250 | 400 | 223 | 7 | 10 | 409 | 3 | 354 | 1.02e-63 | 209 |
| MS.gene022258.t1 | MTR_5g080770 | 32.000 | 400 | 224 | 7 | 10 | 409 | 3 | 354 | 6.09e-63 | 207 |
| MS.gene022258.t1 | MTR_3g069070 | 31.157 | 337 | 187 | 5 | 73 | 409 | 4 | 295 | 3.36e-50 | 172 |
| MS.gene022258.t1 | MTR_4g133690 | 30.275 | 327 | 166 | 5 | 80 | 406 | 30 | 294 | 1.23e-43 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022258.t1 | AT1G74910 | 80.779 | 411 | 78 | 1 | 5 | 415 | 6 | 415 | 0.0 | 711 |
| MS.gene022258.t1 | AT1G74910 | 80.779 | 411 | 78 | 1 | 5 | 415 | 6 | 415 | 0.0 | 711 |
| MS.gene022258.t1 | AT2G04650 | 75.362 | 414 | 93 | 2 | 3 | 415 | 1 | 406 | 0.0 | 658 |
| MS.gene022258.t1 | AT1G74910 | 80.822 | 365 | 69 | 1 | 5 | 369 | 6 | 369 | 0.0 | 640 |
| MS.gene022258.t1 | AT2G04650 | 75.063 | 397 | 90 | 2 | 20 | 415 | 6 | 394 | 0.0 | 629 |
| MS.gene022258.t1 | AT2G39770 | 30.730 | 397 | 227 | 7 | 10 | 406 | 3 | 351 | 1.95e-59 | 197 |
| MS.gene022258.t1 | AT2G39770 | 30.730 | 397 | 227 | 7 | 10 | 406 | 3 | 351 | 1.95e-59 | 197 |
| MS.gene022258.t1 | AT2G39770 | 30.730 | 397 | 227 | 7 | 10 | 406 | 3 | 351 | 1.95e-59 | 197 |
| MS.gene022258.t1 | AT3G55590 | 31.750 | 400 | 220 | 9 | 10 | 405 | 3 | 353 | 2.09e-57 | 192 |
| MS.gene022258.t1 | AT4G30570 | 31.565 | 377 | 211 | 7 | 30 | 405 | 1 | 331 | 7.10e-57 | 190 |
Find 121 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATGAAACCATGGATTTC+TGG | 0.172082 | 3.3:+66525459 | MS.gene022258:CDS |
| CACAATTGAGCAAGAAAATA+TGG | 0.201072 | 3.3:-66523639 | None:intergenic |
| ATCTTGAACGCCGACATTTA+AGG | 0.216010 | 3.3:-66527608 | None:intergenic |
| CCAACCTAACAGGGAGTTTA+AGG | 0.219086 | 3.3:-66522911 | None:intergenic |
| CACAAACATACAAAAGTTTC+AGG | 0.221357 | 3.3:-66524072 | None:intergenic |
| CCAGAGTCGGCCAGTGAATT+TGG | 0.235678 | 3.3:+66523997 | MS.gene022258:CDS |
| TACCATCTCCATTTGCTAAT+AGG | 0.276175 | 3.3:-66525639 | None:intergenic |
| AGATAAATCCGAGCTAAATT+AGG | 0.306173 | 3.3:-66522831 | None:intergenic |
| GGAGATTACAACGCAAAGTT+TGG | 0.306850 | 3.3:+66527052 | MS.gene022258:CDS |
| TCTCCATTTGCTAATAGGTT+AGG | 0.325571 | 3.3:-66525634 | None:intergenic |
| GCTAATGGAAAGAGTGGTTT+AGG | 0.338257 | 3.3:-66522676 | None:intergenic |
| GGCATGAAATCCAACCTAAC+AGG | 0.341961 | 3.3:-66522921 | None:intergenic |
| TTAGGAATGTTGAATGATAA+TGG | 0.346235 | 3.3:-66522658 | None:intergenic |
| GATATCCTCTCACCTCTTGC+AGG | 0.350385 | 3.3:+66525419 | MS.gene022258:CDS |
| TATACACACCACAGTTTATA+AGG | 0.358814 | 3.3:-66524206 | None:intergenic |
| GTTGTTCTTCATGCAATTGT+TGG | 0.365369 | 3.3:+66526298 | MS.gene022258:CDS |
| CTCCATTTGCTAATAGGTTA+GGG | 0.383333 | 3.3:-66525633 | None:intergenic |
| GGCCAGTGAATTTGGCGAAT+TGG | 0.387549 | 3.3:+66524005 | MS.gene022258:CDS |
| GAGATTACAACGCAAAGTTT+GGG | 0.392448 | 3.3:+66527053 | MS.gene022258:CDS |
| TCAATGGCAGTAAAGATATC+TGG | 0.400157 | 3.3:-66524237 | None:intergenic |
| ACGACCTTAAACTCCCTGTT+AGG | 0.403314 | 3.3:+66522907 | MS.gene022258:CDS |
| AAACCACTCTTTCCATTAGC+TGG | 0.410401 | 3.3:+66522679 | MS.gene022258:CDS |
| GACAAGCCTCATGGTTCTGC+TGG | 0.416830 | 3.3:+66523483 | MS.gene022258:CDS |
| TGGACGGAATCGAGTGCCTT+TGG | 0.418152 | 3.3:-66522638 | None:intergenic |
| AAGAAATTACCCAGCATTTG+TGG | 0.418766 | 3.3:-66523685 | None:intergenic |
| CCAAATTCACTGGCCGACTC+TGG | 0.423147 | 3.3:-66523997 | None:intergenic |
| TGGACGATGGGCACGTGTCC+AGG | 0.425264 | 3.3:+66526336 | MS.gene022258:CDS |
| CAGGTTTCTCTGTGTAATGC+AGG | 0.432714 | 3.3:-66524053 | None:intergenic |
| ATATGAAACCATGGATTTCT+GGG | 0.436038 | 3.3:+66525460 | MS.gene022258:CDS |
| ACCATGGGTTGTCCAGCTAA+TGG | 0.441231 | 3.3:-66522691 | None:intergenic |
| TTAGCTCGGATTTATCTCAT+TGG | 0.448196 | 3.3:+66522837 | MS.gene022258:CDS |
| CCTTGATTTCAACATCATCA+AGG | 0.452782 | 3.3:-66526190 | None:intergenic |
| TGGGAACAAATCAAAACTCC+TGG | 0.456084 | 3.3:+66525479 | MS.gene022258:CDS |
| ATTAAGAAAGCCTACATCAT+TGG | 0.457333 | 3.3:+66525661 | MS.gene022258:CDS |
| GAGTTTAAGGTCGTTGGAGA+TGG | 0.461406 | 3.3:-66522898 | None:intergenic |
| TGGTGGCATGGGAACAATAC+TGG | 0.463216 | 3.3:+66523871 | MS.gene022258:CDS |
| CCTTGATGATGTTGAAATCA+AGG | 0.464913 | 3.3:+66526190 | MS.gene022258:CDS |
| CTCAGATTCCTAATTTAGCT+CGG | 0.466843 | 3.3:+66522823 | MS.gene022258:intron |
| GAGAGTTGTGGCGGTTATCA+TGG | 0.469516 | 3.3:+66522603 | MS.gene022258:CDS |
| ATGGTATATTAGATACTTGA+AGG | 0.470369 | 3.3:+66523458 | MS.gene022258:intron |
| CAGAATGTCCATAAAATGTT+CGG | 0.473623 | 3.3:+66525579 | MS.gene022258:intron |
| AACAGGGAGTTTAAGGTCGT+TGG | 0.480946 | 3.3:-66522904 | None:intergenic |
| CTGCTGCATTGCTTCAAAGC+TGG | 0.482375 | 3.3:-66524484 | None:intergenic |
| ATATCTGCAAATGCTCGTAT+AGG | 0.483166 | 3.3:+66526137 | MS.gene022258:CDS |
| AAGTTTGGGGTCACTATACT+TGG | 0.485585 | 3.3:+66527067 | MS.gene022258:CDS |
| AGATATCTTTACTGCCATTG+AGG | 0.489647 | 3.3:+66524239 | MS.gene022258:CDS |
| ACAATTGAGCAAGAAAATAT+GGG | 0.492037 | 3.3:-66523638 | None:intergenic |
| TGTCATCATGGAGGAGGATC+CGG | 0.492171 | 3.3:+66523527 | MS.gene022258:CDS |
| TCCCCTAACCTATTAGCAAA+TGG | 0.493147 | 3.3:+66525631 | MS.gene022258:CDS |
| TACCAATTCGCCAAATTCAC+TGG | 0.493644 | 3.3:-66524007 | None:intergenic |
| GATATCTTTACTGCCATTGA+GGG | 0.493889 | 3.3:+66524240 | MS.gene022258:CDS |
| CGGAATCGAGTGCCTTTGGT+GGG | 0.495390 | 3.3:-66522634 | None:intergenic |
| CTGAGAAGAAACACCCTCAA+TGG | 0.504733 | 3.3:-66524253 | None:intergenic |
| GTTGTGGCGGTTATCATGGT+TGG | 0.505551 | 3.3:+66522607 | MS.gene022258:CDS |
| GACGGATGCACCTTTGCTGA+TGG | 0.506224 | 3.3:-66525700 | None:intergenic |
| AAGCCTCATGGTTCTGCTGG+TGG | 0.514794 | 3.3:+66523486 | MS.gene022258:CDS |
| TCCATTAGCTGGACAACCCA+TGG | 0.516294 | 3.3:+66522690 | MS.gene022258:CDS |
| CATTTAAGGTCTTGTGTGGA+AGG | 0.516494 | 3.3:-66527594 | None:intergenic |
| ATCTGTTGCCGTTGAGGATG+AGG | 0.520316 | 3.3:+66527549 | MS.gene022258:CDS |
| ACGGAATCGAGTGCCTTTGG+TGG | 0.521109 | 3.3:-66522635 | None:intergenic |
| TTCTTCATGCAATTGTTGGA+TGG | 0.524578 | 3.3:+66526302 | MS.gene022258:CDS |
| AACTGTTTCTTCCCTGCAAG+AGG | 0.524841 | 3.3:-66525431 | None:intergenic |
| GAAATCCTCCATTGGACGAT+GGG | 0.528328 | 3.3:+66526324 | MS.gene022258:CDS |
| TTACCCAGCATTTGTGGCAG+AGG | 0.533855 | 3.3:-66523679 | None:intergenic |
| CAGCTTTGAAGCAATGCAGC+AGG | 0.535500 | 3.3:+66524485 | MS.gene022258:CDS |
| TTTCCTCTGCCACAAATGCT+GGG | 0.535993 | 3.3:+66523676 | MS.gene022258:CDS |
| TTTGAAGGTCTCTCCAGAGT+CGG | 0.540442 | 3.3:+66523984 | MS.gene022258:intron |
| ATAAACATCACCAATGATGT+AGG | 0.540713 | 3.3:-66525671 | None:intergenic |
| GTGGCGGTTATCATGGTTGG+AGG | 0.543279 | 3.3:+66522610 | MS.gene022258:CDS |
| TATAAACTAATTCAGGGTCG+TGG | 0.543960 | 3.3:+66527031 | MS.gene022258:intron |
| GCAAATGCTCGTATAGGAGC+TGG | 0.550558 | 3.3:+66526143 | MS.gene022258:CDS |
| TGTGTAATGCAGGAGTTCAT+TGG | 0.552304 | 3.3:-66524043 | None:intergenic |
| TGCCGTTGAGGATGAGGTAG+TGG | 0.555931 | 3.3:+66527555 | MS.gene022258:CDS |
| TGCAGGAGTTCATTGGTGAC+TGG | 0.556407 | 3.3:-66524036 | None:intergenic |
| GTTGGATGGAAATCCTCCAT+TGG | 0.560456 | 3.3:+66526316 | MS.gene022258:CDS |
| ACCGGCGAATTATGTCAGAT+TGG | 0.563640 | 3.3:+66525391 | MS.gene022258:CDS |
| GACACGTGCCCATCGTCCAA+TGG | 0.566978 | 3.3:-66526332 | None:intergenic |
| TAACTTCAAAGATGTCATCA+TGG | 0.567385 | 3.3:+66523515 | MS.gene022258:CDS |
| GTGGTTGAACAGATTGGTCC+TGG | 0.568136 | 3.3:+66526107 | MS.gene022258:intron |
| CAAAGATGTCATCATGGAGG+AGG | 0.569219 | 3.3:+66523521 | MS.gene022258:CDS |
| TTTGCAGATATTGACACGCC+AGG | 0.572563 | 3.3:-66526125 | None:intergenic |
| GTTCTTCTGTAGGAGTCTAC+CGG | 0.579815 | 3.3:+66525373 | MS.gene022258:intron |
| AAGCAATGCAGCAGGACACA+AGG | 0.584010 | 3.3:+66524493 | MS.gene022258:CDS |
| ACGGATGCACCTTTGCTGAT+GGG | 0.584982 | 3.3:-66525699 | None:intergenic |
| ATGGTTGGAGGCCCCACCAA+AGG | 0.585366 | 3.3:+66522622 | MS.gene022258:CDS |
| GAATGTTGAATGATAATGGA+CGG | 0.587591 | 3.3:-66522654 | None:intergenic |
| GGGAACAATACTGGTTGTCA+AGG | 0.588610 | 3.3:+66523880 | MS.gene022258:CDS |
| AGGTGAATCTGTTGCCGTTG+AGG | 0.589560 | 3.3:+66527543 | MS.gene022258:intron |
| GGGAACAAATCAAAACTCCT+GGG | 0.589638 | 3.3:+66525480 | MS.gene022258:CDS |
| GGAAATCCTCCATTGGACGA+TGG | 0.596829 | 3.3:+66526323 | MS.gene022258:CDS |
| CCGACATTTAAGGTCTTGTG+TGG | 0.598385 | 3.3:-66527598 | None:intergenic |
| TGAATATTAACCTTTGCAGA+CGG | 0.603189 | 3.3:-66525718 | None:intergenic |
| GCGAAATTGTGAAAGATACA+AGG | 0.603731 | 3.3:-66525602 | None:intergenic |
| GGAATCGAGTGCCTTTGGTG+GGG | 0.604355 | 3.3:-66522633 | None:intergenic |
| GCATGAAATCCAACCTAACA+GGG | 0.605620 | 3.3:-66522920 | None:intergenic |
| AACCTATTAGCAAATGGAGA+TGG | 0.606606 | 3.3:+66525637 | MS.gene022258:CDS |
| AAAGGTGCATCCGTCTGCAA+AGG | 0.606718 | 3.3:+66525708 | MS.gene022258:CDS |
| TGTCCAGCTAATGGAAAGAG+TGG | 0.609015 | 3.3:-66522682 | None:intergenic |
| ATATCCTCTCACCTCTTGCA+GGG | 0.611025 | 3.3:+66525420 | MS.gene022258:CDS |
| TTATATTCACCCATCAGCAA+AGG | 0.612901 | 3.3:+66525690 | MS.gene022258:CDS |
| GATTTGTTCCCAGAAATCCA+TGG | 0.614324 | 3.3:-66525468 | None:intergenic |
| TTGAAGGAGGACAAGCCTCA+TGG | 0.616152 | 3.3:+66523474 | MS.gene022258:CDS |
| TCCAATCTGACATAATTCGC+CGG | 0.617056 | 3.3:-66525392 | None:intergenic |
| TCTTCCCTGCAAGAGGTGAG+AGG | 0.617718 | 3.3:-66525424 | None:intergenic |
| CTAATAGGTTAGGGGATGTG+TGG | 0.618342 | 3.3:-66525624 | None:intergenic |
| AACCACTACCTCATCCTCAA+CGG | 0.619133 | 3.3:-66527557 | None:intergenic |
| TCCATTTGCTAATAGGTTAG+GGG | 0.621385 | 3.3:-66525632 | None:intergenic |
| GTTGTATATATATGAAACCA+TGG | 0.622029 | 3.3:+66525451 | MS.gene022258:CDS |
| AGAGATTGGATGATGAACCA+TGG | 0.625691 | 3.3:-66522707 | None:intergenic |
| TGCAGAAGAGAGAGTTGTGG+CGG | 0.627371 | 3.3:+66522594 | MS.gene022258:CDS |
| GAGATTGGATGATGAACCAT+GGG | 0.630585 | 3.3:-66522706 | None:intergenic |
| AGATTACAACGCAAAGTTTG+GGG | 0.633486 | 3.3:+66527054 | MS.gene022258:CDS |
| TTGAGGGTGTTTCTTCTCAG+CGG | 0.638549 | 3.3:+66524256 | MS.gene022258:CDS |
| CCACACAAGACCTTAAATGT+CGG | 0.639985 | 3.3:+66527598 | MS.gene022258:CDS |
| TCTTCTCAGCGGAAAGACAG+AGG | 0.647631 | 3.3:+66524267 | MS.gene022258:CDS |
| ACGTGCCCATCGTCCAATGG+AGG | 0.649101 | 3.3:-66526329 | None:intergenic |
| GTTAGTGACCTTATAAACTG+TGG | 0.686135 | 3.3:+66524198 | MS.gene022258:CDS |
| GTATATTAGATACTTGAAGG+AGG | 0.708091 | 3.3:+66523461 | MS.gene022258:intron |
| CTTCAAAGATGTCATCATGG+AGG | 0.716377 | 3.3:+66523518 | MS.gene022258:CDS |
| AATTGCAGAAGAGAGAGTTG+TGG | 0.716827 | 3.3:+66522591 | MS.gene022258:CDS |
| AGACCACCAGCAGAACCATG+AGG | 0.741974 | 3.3:-66523489 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATATGAAGAAATTAAA+AGG | - | chr3.3:66523565-66523584 | None:intergenic | 10.0% |
| !!! | ATTAACTAAGAATAATTTTT+GGG | + | chr3.3:66524427-66524446 | MS.gene022258:intron | 10.0% |
| !!! | TATTAACTAAGAATAATTTT+TGG | + | chr3.3:66524426-66524445 | MS.gene022258:intron | 10.0% |
| !!! | TTTTTTTTTTTGTTTTCAAT+AGG | - | chr3.3:66526721-66526740 | None:intergenic | 10.0% |
| !! | AACAAGATATAAGATAATTA+TGG | - | chr3.3:66527245-66527264 | None:intergenic | 15.0% |
| !! | ACAAGATATAAGATAATTAT+GGG | - | chr3.3:66527244-66527263 | None:intergenic | 15.0% |
| !! | TAAAAGGATAATATAATAAC+CGG | - | chr3.3:66523549-66523568 | None:intergenic | 15.0% |
| !! | TGAAGATATTCTTATATTTA+AGG | - | chr3.3:66527150-66527169 | None:intergenic | 15.0% |
| !! | TGTTATGAGTAAAAAATATT+AGG | - | chr3.3:66525823-66525842 | None:intergenic | 15.0% |
| !!! | TAAGTTTAGAATATTTAACT+TGG | - | chr3.3:66525187-66525206 | None:intergenic | 15.0% |
| !!! | TATTTGGAATAAAATCTTTA+GGG | + | chr3.3:66525004-66525023 | MS.gene022258:intron | 15.0% |
| !!! | TCATGAGTTTTTTTTTTTTT+TGG | - | chr3.3:66527414-66527433 | None:intergenic | 15.0% |
| !!! | TTTTAAATATTTCATCTTAC+AGG | + | chr3.3:66526267-66526286 | MS.gene022258:intron | 15.0% |
| !! | AATAAAAGGAATGTAAAGAT+AGG | - | chr3.3:66526990-66527009 | None:intergenic | 20.0% |
| !! | AATAAGAGCAGAAAAAAATT+AGG | - | chr3.3:66523403-66523422 | None:intergenic | 20.0% |
| !! | AATCGAGTTTATATATTTAG+AGG | + | chr3.3:66527441-66527460 | MS.gene022258:intron | 20.0% |
| !! | GAAATGTATAAACTAATTCA+GGG | + | chr3.3:66527025-66527044 | MS.gene022258:intron | 20.0% |
| !! | GATATTCTTATATTTAAGGA+CGG | - | chr3.3:66527146-66527165 | None:intergenic | 20.0% |
| !! | TATATGATTGTCAACAATAT+TGG | + | chr3.3:66524808-66524827 | MS.gene022258:intron | 20.0% |
| !! | TGAAATGTATAAACTAATTC+AGG | + | chr3.3:66527024-66527043 | MS.gene022258:intron | 20.0% |
| !! | TTAATTGATGCATATCATAT+AGG | + | chr3.3:66525969-66525988 | MS.gene022258:intron | 20.0% |
| !! | TTCACTCAAAAAGATAAAAT+AGG | - | chr3.3:66526026-66526045 | None:intergenic | 20.0% |
| !!! | ATCAAAATGGGAAAATATTT+TGG | - | chr3.3:66526884-66526903 | None:intergenic | 20.0% |
| !!! | ATTTTATCTTTTTGAGTGAA+AGG | + | chr3.3:66526026-66526045 | MS.gene022258:intron | 20.0% |
| !!! | CCAAAATTATCATATTTTGA+AGG | - | chr3.3:66526850-66526869 | None:intergenic | 20.0% |
| !!! | CCTTCAAAATATGATAATTT+TGG | + | chr3.3:66526847-66526866 | MS.gene022258:intron | 20.0% |
| !!! | GTATTTGGAATAAAATCTTT+AGG | + | chr3.3:66525003-66525022 | MS.gene022258:intron | 20.0% |
| !!! | TAAAAAGTATATGTTCATTC+AGG | - | chr3.3:66526548-66526567 | None:intergenic | 20.0% |
| !!! | TCATCTAAATTTTGAAAAAC+AGG | - | chr3.3:66524545-66524564 | None:intergenic | 20.0% |
| !!! | TGAAATGCATAAAACATTTT+TGG | + | chr3.3:66526236-66526255 | MS.gene022258:intron | 20.0% |
| !!! | TTTTTTTGGTACAAAAAAGA+GGG | - | chr3.3:66527400-66527419 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGGTACAAAAAAG+AGG | - | chr3.3:66527401-66527420 | None:intergenic | 20.0% |
| ! | AAAATAAGTGTATGCATACA+TGG | - | chr3.3:66524735-66524754 | None:intergenic | 25.0% |
| ! | AACTTAGAAATGATTCATAG+AGG | + | chr3.3:66525201-66525220 | MS.gene022258:intron | 25.0% |
| ! | ACAATTGAGCAAGAAAATAT+GGG | - | chr3.3:66523641-66523660 | None:intergenic | 25.0% |
| ! | AGTAAAATTTCAGAAAGTTC+TGG | - | chr3.3:66524568-66524587 | None:intergenic | 25.0% |
| ! | ATGGTATATTAGATACTTGA+AGG | + | chr3.3:66523458-66523477 | MS.gene022258:intron | 25.0% |
| ! | ATTCTTAGTTAATATACACG+AGG | - | chr3.3:66524420-66524439 | None:intergenic | 25.0% |
| ! | CAAAATAAACCATTTAAGCA+TGG | + | chr3.3:66524862-66524881 | MS.gene022258:intron | 25.0% |
| ! | CTCTTGAAAAGTAAACTTAA+CGG | + | chr3.3:66527308-66527327 | MS.gene022258:intron | 25.0% |
| ! | GCAAATAAATTGCGAATAAA+AGG | - | chr3.3:66527004-66527023 | None:intergenic | 25.0% |
| ! | GTTGTATATATATGAAACCA+TGG | + | chr3.3:66525451-66525470 | MS.gene022258:CDS | 25.0% |
| ! | TATTGAAAAACTCAAGTAAC+AGG | - | chr3.3:66526425-66526444 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATTCATTC+AGG | - | chr3.3:66522945-66522964 | None:intergenic | 25.0% |
| ! | TTAGGAATGTTGAATGATAA+TGG | - | chr3.3:66522661-66522680 | None:intergenic | 25.0% |
| ! | TTCCTTAATAGTGCTTATAT+GGG | - | chr3.3:66525109-66525128 | None:intergenic | 25.0% |
| !! | ATATGTTGTTTATCCAAACT+TGG | + | chr3.3:66523377-66523396 | MS.gene022258:intron | 25.0% |
| !! | GAAAACAAGGATAGTTTTTA+TGG | + | chr3.3:66525326-66525345 | MS.gene022258:intron | 25.0% |
| !! | TAATTTGTGCTGGATATATA+AGG | + | chr3.3:66524371-66524390 | MS.gene022258:intron | 25.0% |
| !! | TTTTTATGAACGCTATAGTA+GGG | - | chr3.3:66526941-66526960 | None:intergenic | 25.0% |
| !!! | ATACTTTTTAGAGTAGAACT+TGG | + | chr3.3:66526558-66526577 | MS.gene022258:intron | 25.0% |
| !!! | CACTGATCTTATTTTCTTAT+TGG | - | chr3.3:66524929-66524948 | None:intergenic | 25.0% |
| !!! | CATTTAGGTTTTCTTTTTCT+TGG | - | chr3.3:66526053-66526072 | None:intergenic | 25.0% |
| !!! | GGCTTTTAACTAATCATTTT+GGG | - | chr3.3:66524908-66524927 | None:intergenic | 25.0% |
| !!! | TGGCTTTTAACTAATCATTT+TGG | - | chr3.3:66524909-66524928 | None:intergenic | 25.0% |
| !!! | TTTTTTATGAACGCTATAGT+AGG | - | chr3.3:66526942-66526961 | None:intergenic | 25.0% |
| AAAGGATCACAAAAATTGGA+TGG | - | chr3.3:66523955-66523974 | None:intergenic | 30.0% | |
| AACCCATATAAGCACTATTA+AGG | + | chr3.3:66525104-66525123 | MS.gene022258:intron | 30.0% | |
| AACTTTACTGTTATCATCTG+CGG | + | chr3.3:66526791-66526810 | MS.gene022258:intron | 30.0% | |
| AAGACATATAGCATTATGCA+TGG | + | chr3.3:66526589-66526608 | MS.gene022258:intron | 30.0% | |
| AATACGATAATCACACATGA+AGG | - | chr3.3:66525543-66525562 | None:intergenic | 30.0% | |
| AATGTTACTAGTTGTACTTC+AGG | + | chr3.3:66525847-66525866 | MS.gene022258:intron | 30.0% | |
| ACACAAGAACAGATAGTATT+TGG | + | chr3.3:66524988-66525007 | MS.gene022258:intron | 30.0% | |
| ACATAAGCGTTTATCATGAT+TGG | + | chr3.3:66523129-66523148 | MS.gene022258:intron | 30.0% | |
| ACTATTAAGGAAGGATAGAA+TGG | + | chr3.3:66525117-66525136 | MS.gene022258:intron | 30.0% | |
| AGATAAATCCGAGCTAAATT+AGG | - | chr3.3:66522834-66522853 | None:intergenic | 30.0% | |
| ATAAACATCACCAATGATGT+AGG | - | chr3.3:66525674-66525693 | None:intergenic | 30.0% | |
| ATAAGTTCTATGAGACTGTT+TGG | + | chr3.3:66523222-66523241 | MS.gene022258:intron | 30.0% | |
| ATATGAAACCATGGATTTCT+GGG | + | chr3.3:66525460-66525479 | MS.gene022258:CDS | 30.0% | |
| ATGATTCATAGAGGACATTA+TGG | + | chr3.3:66525210-66525229 | MS.gene022258:intron | 30.0% | |
| ATTAAGAAAGCCTACATCAT+TGG | + | chr3.3:66525661-66525680 | MS.gene022258:CDS | 30.0% | |
| ATTCTTATATTTAAGGACGG+AGG | - | chr3.3:66527143-66527162 | None:intergenic | 30.0% | |
| ATTTAAACTCCCTGTTAAGT+TGG | + | chr3.3:66523162-66523181 | MS.gene022258:intron | 30.0% | |
| CACAAACATACAAAAGTTTC+AGG | - | chr3.3:66524075-66524094 | None:intergenic | 30.0% | |
| CACAATTGAGCAAGAAAATA+TGG | - | chr3.3:66523642-66523661 | None:intergenic | 30.0% | |
| CAGAATGTCCATAAAATGTT+CGG | + | chr3.3:66525579-66525598 | MS.gene022258:intron | 30.0% | |
| CATAACATGTCAAGACATTT+AGG | - | chr3.3:66526068-66526087 | None:intergenic | 30.0% | |
| CATAGTGAACAAGATAAATG+AGG | - | chr3.3:66523441-66523460 | None:intergenic | 30.0% | |
| CATATAAGCACTATTAAGGA+AGG | + | chr3.3:66525108-66525127 | MS.gene022258:intron | 30.0% | |
| CGAGTTTATATATTTAGAGG+CGG | + | chr3.3:66527444-66527463 | MS.gene022258:intron | 30.0% | |
| CTCATTTATCTTGTTCACTA+TGG | + | chr3.3:66523439-66523458 | MS.gene022258:intron | 30.0% | |
| CTTCCTTAATAGTGCTTATA+TGG | - | chr3.3:66525110-66525129 | None:intergenic | 30.0% | |
| GAAAAAAATTAGGCCAAGTT+TGG | - | chr3.3:66523393-66523412 | None:intergenic | 30.0% | |
| GAGAAAAGGATCACAAAAAT+TGG | - | chr3.3:66523959-66523978 | None:intergenic | 30.0% | |
| GATTATACATACGCGTTTAT+TGG | + | chr3.3:66523333-66523352 | MS.gene022258:intron | 30.0% | |
| GTACAAAATCCATGCTTAAA+TGG | - | chr3.3:66524874-66524893 | None:intergenic | 30.0% | |
| GTATATTAGATACTTGAAGG+AGG | + | chr3.3:66523461-66523480 | MS.gene022258:intron | 30.0% | |
| TAAATTGTTCCACTAGCTAA+AGG | + | chr3.3:66526385-66526404 | MS.gene022258:intron | 30.0% | |
| TAACTTCAAAGATGTCATCA+TGG | + | chr3.3:66523515-66523534 | MS.gene022258:CDS | 30.0% | |
| TAAGTTCTATGAGACTGTTT+GGG | + | chr3.3:66523223-66523242 | MS.gene022258:intron | 30.0% | |
| TAATCATCAAAATGCCACAA+TGG | - | chr3.3:66523932-66523951 | None:intergenic | 30.0% | |
| TACTAGTACTAGTATGTTGA+TGG | + | chr3.3:66523590-66523609 | MS.gene022258:intron | 30.0% | |
| TATAAGGAACTGTAGATAAC+TGG | + | chr3.3:66524387-66524406 | MS.gene022258:intron | 30.0% | |
| TATACACACCACAGTTTATA+AGG | - | chr3.3:66524209-66524228 | None:intergenic | 30.0% | |
| TATATGAAACCATGGATTTC+TGG | + | chr3.3:66525459-66525478 | MS.gene022258:CDS | 30.0% | |
| TATGTAATTGGAAAAGACTC+TGG | + | chr3.3:66525271-66525290 | MS.gene022258:intron | 30.0% | |
| TGAATATTAACCTTTGCAGA+CGG | - | chr3.3:66525721-66525740 | None:intergenic | 30.0% | |
| TTAAAATTTCCAAACTTGCC+TGG | - | chr3.3:66526357-66526376 | None:intergenic | 30.0% | |
| TTTAACTCTCGTGATTTAGA+GGG | + | chr3.3:66527369-66527388 | MS.gene022258:intron | 30.0% | |
| TTTATATATTTAGAGGCGGA+GGG | + | chr3.3:66527448-66527467 | MS.gene022258:intron | 30.0% | |
| ! | ATGGAAATGAGGTATCAAAA+TGG | - | chr3.3:66526897-66526916 | None:intergenic | 30.0% |
| ! | ATGTTCAATCTAATTTGTGC+TGG | + | chr3.3:66524361-66524380 | MS.gene022258:intron | 30.0% |
| ! | CAACTTGACTTTTGTTAATG+TGG | + | chr3.3:66526088-66526107 | MS.gene022258:intron | 30.0% |
| ! | GGAGTTCTTCATATTTTGTA+TGG | + | chr3.3:66523611-66523630 | MS.gene022258:intron | 30.0% |
| ! | TGCTGTTTGATCTATGTAAT+TGG | + | chr3.3:66525259-66525278 | MS.gene022258:intron | 30.0% |
| ! | TGGAAATGAGGTATCAAAAT+GGG | - | chr3.3:66526896-66526915 | None:intergenic | 30.0% |
| !! | GAATGTTGAATGATAATGGA+CGG | - | chr3.3:66522657-66522676 | None:intergenic | 30.0% |
| !! | TTTTAACTCTCGTGATTTAG+AGG | + | chr3.3:66527368-66527387 | MS.gene022258:intron | 30.0% |
| AAACGCAAACTTCGTATTTC+TGG | - | chr3.3:66524311-66524330 | None:intergenic | 35.0% | |
| AAACTCAACATGCCTCAAAT+AGG | + | chr3.3:66526670-66526689 | MS.gene022258:intron | 35.0% | |
| AAATAGGATTACCTTACCTC+CGG | + | chr3.3:66526686-66526705 | MS.gene022258:intron | 35.0% | |
| AACCTATTAGCAAATGGAGA+TGG | + | chr3.3:66525637-66525656 | MS.gene022258:CDS | 35.0% | |
| AAGAAATTACCCAGCATTTG+TGG | - | chr3.3:66523688-66523707 | None:intergenic | 35.0% | |
| ACAGATGCTCACAAAAAACA+TGG | + | chr3.3:66523851-66523870 | MS.gene022258:intron | 35.0% | |
| ACCTTCAAAAAGAGGAGAAA+AGG | - | chr3.3:66523973-66523992 | None:intergenic | 35.0% | |
| AGATATCTTTACTGCCATTG+AGG | + | chr3.3:66524239-66524258 | MS.gene022258:CDS | 35.0% | |
| AGATGATGAGAATGCTATGA+TGG | + | chr3.3:66524955-66524974 | MS.gene022258:intron | 35.0% | |
| AGATTACAACGCAAAGTTTG+GGG | + | chr3.3:66527054-66527073 | MS.gene022258:CDS | 35.0% | |
| AGGCAAGTCTACACATTAAT+TGG | + | chr3.3:66526210-66526229 | MS.gene022258:intron | 35.0% | |
| AGGTAAGGTAATCCTATTTG+AGG | - | chr3.3:66526685-66526704 | None:intergenic | 35.0% | |
| ATATCTGCAAATGCTCGTAT+AGG | + | chr3.3:66526137-66526156 | MS.gene022258:CDS | 35.0% | |
| ATTCAGAAGAGTTCTTCTGT+AGG | + | chr3.3:66525363-66525382 | MS.gene022258:intron | 35.0% | |
| CACTATACAGTGTGAAAACA+AGG | + | chr3.3:66525313-66525332 | MS.gene022258:intron | 35.0% | |
| CATTTCCATAGCAATGTTGA+GGG | + | chr3.3:66526908-66526927 | MS.gene022258:intron | 35.0% | |
| CCTTGATTTCAACATCATCA+AGG | - | chr3.3:66526193-66526212 | None:intergenic | 35.0% | |
| CTCAGATTCCTAATTTAGCT+CGG | + | chr3.3:66522823-66522842 | MS.gene022258:intron | 35.0% | |
| GAACAAGATAAATGAGGAAG+AGG | - | chr3.3:66523435-66523454 | None:intergenic | 35.0% | |
| GAATACTGTTATTATGGGGA+AGG | + | chr3.3:66527470-66527489 | MS.gene022258:intron | 35.0% | |
| GAGATTACAACGCAAAGTTT+GGG | + | chr3.3:66527053-66527072 | MS.gene022258:CDS | 35.0% | |
| GAGGGAATACTGTTATTATG+GGG | + | chr3.3:66527466-66527485 | MS.gene022258:intron | 35.0% | |
| GATAATATTCAAGCTTACCC+AGG | - | chr3.3:66525500-66525519 | None:intergenic | 35.0% | |
| GATAGAATCTTGCCTTAAGT+TGG | + | chr3.3:66525061-66525080 | MS.gene022258:intron | 35.0% | |
| GATATCTTTACTGCCATTGA+GGG | + | chr3.3:66524240-66524259 | MS.gene022258:CDS | 35.0% | |
| GCGAAATTGTGAAAGATACA+AGG | - | chr3.3:66525605-66525624 | None:intergenic | 35.0% | |
| GGAGGGAATACTGTTATTAT+GGG | + | chr3.3:66527465-66527484 | MS.gene022258:intron | 35.0% | |
| GGATAGAATGGTAGATAGAA+TGG | + | chr3.3:66525129-66525148 | MS.gene022258:intron | 35.0% | |
| GGTTGTCAAGGTTAGAAATT+GGG | + | chr3.3:66523892-66523911 | MS.gene022258:intron | 35.0% | |
| GTTAATGTGGTTGAACAGAT+TGG | + | chr3.3:66526101-66526120 | MS.gene022258:intron | 35.0% | |
| GTTAGTGACCTTATAAACTG+TGG | + | chr3.3:66524198-66524217 | MS.gene022258:CDS | 35.0% | |
| GTTGTTCTTCATGCAATTGT+TGG | + | chr3.3:66526298-66526317 | MS.gene022258:CDS | 35.0% | |
| GTTTATATATTTAGAGGCGG+AGG | + | chr3.3:66527447-66527466 | MS.gene022258:intron | 35.0% | |
| TATAAACTAATTCAGGGTCG+TGG | + | chr3.3:66527031-66527050 | MS.gene022258:intron | 35.0% | |
| TCAAATACGTTGATCCAAAC+TGG | - | chr3.3:66523196-66523215 | None:intergenic | 35.0% | |
| TCAACATTGCTATGGAAATG+AGG | - | chr3.3:66526908-66526927 | None:intergenic | 35.0% | |
| TCAATGGCAGTAAAGATATC+TGG | - | chr3.3:66524240-66524259 | None:intergenic | 35.0% | |
| TCAGATGTACTACCAACTTA+AGG | - | chr3.3:66525076-66525095 | None:intergenic | 35.0% | |
| TCATTTCCATAGCAATGTTG+AGG | + | chr3.3:66526907-66526926 | MS.gene022258:intron | 35.0% | |
| TGATCGAGATCTGATTAAGA+AGG | - | chr3.3:66524689-66524708 | None:intergenic | 35.0% | |
| TGGAAGATAATACATCAGTG+AGG | + | chr3.3:66525149-66525168 | MS.gene022258:intron | 35.0% | |
| TGGTTGTCAAGGTTAGAAAT+TGG | + | chr3.3:66523891-66523910 | MS.gene022258:intron | 35.0% | |
| TTAGCTCGGATTTATCTCAT+TGG | + | chr3.3:66522837-66522856 | MS.gene022258:CDS | 35.0% | |
| TTATATTCACCCATCAGCAA+AGG | + | chr3.3:66525690-66525709 | MS.gene022258:CDS | 35.0% | |
| TTATATTTAAGGACGGAGGT+AGG | - | chr3.3:66527139-66527158 | None:intergenic | 35.0% | |
| TTCTCATAACACAGATCAAG+TGG | - | chr3.3:66525933-66525952 | None:intergenic | 35.0% | |
| TTCTTCATGCAATTGTTGGA+TGG | + | chr3.3:66526302-66526321 | MS.gene022258:CDS | 35.0% | |
| ! | ATACAAGGCCGAACATTTTA+TGG | - | chr3.3:66525590-66525609 | None:intergenic | 35.0% |
| ! | CTCCATTTGCTAATAGGTTA+GGG | - | chr3.3:66525636-66525655 | None:intergenic | 35.0% |
| ! | TACCATCTCCATTTGCTAAT+AGG | - | chr3.3:66525642-66525661 | None:intergenic | 35.0% |
| ! | TCCATTTGCTAATAGGTTAG+GGG | - | chr3.3:66525635-66525654 | None:intergenic | 35.0% |
| ! | TCCTTTTCTCCTCTTTTTGA+AGG | + | chr3.3:66523969-66523988 | MS.gene022258:intron | 35.0% |
| ! | TCTCCATTTGCTAATAGGTT+AGG | - | chr3.3:66525637-66525656 | None:intergenic | 35.0% |
| !! | ATTTGAGGCATGTTGAGTTT+TGG | - | chr3.3:66526670-66526689 | None:intergenic | 35.0% |
| !! | CACACATTGTTTTTCCATTG+TGG | + | chr3.3:66523915-66523934 | MS.gene022258:intron | 35.0% |
| !! | CCTTGATGATGTTGAAATCA+AGG | + | chr3.3:66526190-66526209 | MS.gene022258:CDS | 35.0% |
| !! | TTAAGTTGGTAGTACATCTG+AGG | + | chr3.3:66525075-66525094 | MS.gene022258:intron | 35.0% |
| AAACCACTCTTTCCATTAGC+TGG | + | chr3.3:66522679-66522698 | MS.gene022258:CDS | 40.0% | |
| AAGATAAAATAGGTCCTCGC+AGG | - | chr3.3:66526016-66526035 | None:intergenic | 40.0% | |
| AAGATGATCGTGAAAGCCTT+GGG | - | chr3.3:66525774-66525793 | None:intergenic | 40.0% | |
| AATTGCAGAAGAGAGAGTTG+TGG | + | chr3.3:66522591-66522610 | MS.gene022258:CDS | 40.0% | |
| AGAGATTGGATGATGAACCA+TGG | - | chr3.3:66522710-66522729 | None:intergenic | 40.0% | |
| ATAAGACGGTAAACAGCAGT+AGG | - | chr3.3:66524155-66524174 | None:intergenic | 40.0% | |
| ATCTTGAACGCCGACATTTA+AGG | - | chr3.3:66527611-66527630 | None:intergenic | 40.0% | |
| CAAAACAAGCCTTTAGCTAG+TGG | - | chr3.3:66526397-66526416 | None:intergenic | 40.0% | |
| CAATGTCCTGCTAAGAAACA+AGG | - | chr3.3:66525236-66525255 | None:intergenic | 40.0% | |
| CACAAAAAACATGGTGGCAT+GGG | + | chr3.3:66523860-66523879 | MS.gene022258:CDS | 40.0% | |
| CCACACAAGACCTTAAATGT+CGG | + | chr3.3:66527598-66527617 | MS.gene022258:CDS | 40.0% | |
| CGGAGGGAATACTGTTATTA+TGG | + | chr3.3:66527464-66527483 | MS.gene022258:intron | 40.0% | |
| CTTCAAAGATGTCATCATGG+AGG | + | chr3.3:66523518-66523537 | MS.gene022258:CDS | 40.0% | |
| GAGATTGGATGATGAACCAT+GGG | - | chr3.3:66522709-66522728 | None:intergenic | 40.0% | |
| GATGCTCACAAAAAACATGG+TGG | + | chr3.3:66523854-66523873 | MS.gene022258:intron | 40.0% | |
| GCATGAAATCCAACCTAACA+GGG | - | chr3.3:66522923-66522942 | None:intergenic | 40.0% | |
| GCCACTAATCCAACTTAACA+GGG | - | chr3.3:66523174-66523193 | None:intergenic | 40.0% | |
| GCTAATGGAAAGAGTGGTTT+AGG | - | chr3.3:66522679-66522698 | None:intergenic | 40.0% | |
| GCTTCTCATACAGGAGAAAT+GGG | - | chr3.3:66526508-66526527 | None:intergenic | 40.0% | |
| GGAGATTACAACGCAAAGTT+TGG | + | chr3.3:66527052-66527071 | MS.gene022258:CDS | 40.0% | |
| GGGAACAAATCAAAACTCCT+GGG | + | chr3.3:66525480-66525499 | MS.gene022258:CDS | 40.0% | |
| GTAATTGGAAAAGACTCTGG+TGG | + | chr3.3:66525274-66525293 | MS.gene022258:intron | 40.0% | |
| TAAGACGGTAAACAGCAGTA+GGG | - | chr3.3:66524154-66524173 | None:intergenic | 40.0% | |
| TAAGATGATCGTGAAAGCCT+TGG | - | chr3.3:66525775-66525794 | None:intergenic | 40.0% | |
| TACCAATTCGCCAAATTCAC+TGG | - | chr3.3:66524010-66524029 | None:intergenic | 40.0% | |
| TCACAAAAAACATGGTGGCA+TGG | + | chr3.3:66523859-66523878 | MS.gene022258:CDS | 40.0% | |
| TCCAATCTGACATAATTCGC+CGG | - | chr3.3:66525395-66525414 | None:intergenic | 40.0% | |
| TCCCCTAACCTATTAGCAAA+TGG | + | chr3.3:66525631-66525650 | MS.gene022258:CDS | 40.0% | |
| TGCTTCTCATACAGGAGAAA+TGG | - | chr3.3:66526509-66526528 | None:intergenic | 40.0% | |
| TGGGAACAAATCAAAACTCC+TGG | + | chr3.3:66525479-66525498 | MS.gene022258:CDS | 40.0% | |
| TGTGTAATGCAGGAGTTCAT+TGG | - | chr3.3:66524046-66524065 | None:intergenic | 40.0% | |
| TTTGTTCTAGTCTAGCCTCT+AGG | - | chr3.3:66526616-66526635 | None:intergenic | 40.0% | |
| ! | AAGTTTGGGGTCACTATACT+TGG | + | chr3.3:66527067-66527086 | MS.gene022258:CDS | 40.0% |
| ! | ACTTTTCGACAAGCAGAGAT+TGG | - | chr3.3:66522724-66522743 | None:intergenic | 40.0% |
| ! | CATTTAAGGTCTTGTGTGGA+AGG | - | chr3.3:66527597-66527616 | None:intergenic | 40.0% |
| ! | GATTTGTTCCCAGAAATCCA+TGG | - | chr3.3:66525471-66525490 | None:intergenic | 40.0% |
| !! | TCCCTGTTAAGTTGGATTAG+TGG | + | chr3.3:66523170-66523189 | MS.gene022258:intron | 40.0% |
| !! | TTATGGCCTTGTTTCTTAGC+AGG | + | chr3.3:66525227-66525246 | MS.gene022258:intron | 40.0% |
| AAAATAGGTCCTCGCAGGTA+TGG | - | chr3.3:66526011-66526030 | None:intergenic | 45.0% | |
| AAATAGGTCCTCGCAGGTAT+GGG | - | chr3.3:66526010-66526029 | None:intergenic | 45.0% | |
| AACCACTACCTCATCCTCAA+CGG | - | chr3.3:66527560-66527579 | None:intergenic | 45.0% | |
| AAGGTCACTAACCTGCAATC+AGG | - | chr3.3:66524190-66524209 | None:intergenic | 45.0% | |
| ACCGGCGAATTATGTCAGAT+TGG | + | chr3.3:66525391-66525410 | MS.gene022258:CDS | 45.0% | |
| ACGACCTTAAACTCCCTGTT+AGG | + | chr3.3:66522907-66522926 | MS.gene022258:CDS | 45.0% | |
| AGATGATCGTGAAAGCCTTG+GGG | - | chr3.3:66525773-66525792 | None:intergenic | 45.0% | |
| AGCATTATGCATGGTCCTAG+AGG | + | chr3.3:66526598-66526617 | MS.gene022258:intron | 45.0% | |
| ATACATCAGTGAGGCGTAGA+AGG | + | chr3.3:66525158-66525177 | MS.gene022258:intron | 45.0% | |
| ATATCCTCTCACCTCTTGCA+GGG | + | chr3.3:66525420-66525439 | MS.gene022258:CDS | 45.0% | |
| CAAAGATGTCATCATGGAGG+AGG | + | chr3.3:66523521-66523540 | MS.gene022258:CDS | 45.0% | |
| CAGGTTTCTCTGTGTAATGC+AGG | - | chr3.3:66524056-66524075 | None:intergenic | 45.0% | |
| CATTCAGGCTCAAGATGAGT+GGG | - | chr3.3:66526533-66526552 | None:intergenic | 45.0% | |
| CCAACCTAACAGGGAGTTTA+AGG | - | chr3.3:66522914-66522933 | None:intergenic | 45.0% | |
| CCTTAAACTCCCTGTTAGGT+TGG | + | chr3.3:66522911-66522930 | MS.gene022258:intron | 45.0% | |
| CTAATAGGTTAGGGGATGTG+TGG | - | chr3.3:66525627-66525646 | None:intergenic | 45.0% | |
| CTGAGAAGAAACACCCTCAA+TGG | - | chr3.3:66524256-66524275 | None:intergenic | 45.0% | |
| CTGGAGAGACCTTCAAAAAG+AGG | - | chr3.3:66523981-66524000 | None:intergenic | 45.0% | |
| CTTGTTCTCATGTTGTGACC+AGG | + | chr3.3:66527523-66527542 | MS.gene022258:intron | 45.0% | |
| GAAATCCTCCATTGGACGAT+GGG | + | chr3.3:66526324-66526343 | MS.gene022258:CDS | 45.0% | |
| GGCATGAAATCCAACCTAAC+AGG | - | chr3.3:66522924-66522943 | None:intergenic | 45.0% | |
| GGCCACTAATCCAACTTAAC+AGG | - | chr3.3:66523175-66523194 | None:intergenic | 45.0% | |
| GGTAAGCTTGCAGCATAAGA+CGG | - | chr3.3:66524169-66524188 | None:intergenic | 45.0% | |
| GTTCTTCTGTAGGAGTCTAC+CGG | + | chr3.3:66525373-66525392 | MS.gene022258:intron | 45.0% | |
| GTTGGATGGAAATCCTCCAT+TGG | + | chr3.3:66526316-66526335 | MS.gene022258:CDS | 45.0% | |
| TCATTCAGGCTCAAGATGAG+TGG | - | chr3.3:66526534-66526553 | None:intergenic | 45.0% | |
| TGTCCAGCTAATGGAAAGAG+TGG | - | chr3.3:66522685-66522704 | None:intergenic | 45.0% | |
| TTACTGTTATCATCTGCGGC+AGG | + | chr3.3:66526795-66526814 | MS.gene022258:intron | 45.0% | |
| TTTCAATAGGTTCCCTCCAC+CGG | - | chr3.3:66526708-66526727 | None:intergenic | 45.0% | |
| TTTCCTCTGCCACAAATGCT+GGG | + | chr3.3:66523676-66523695 | MS.gene022258:CDS | 45.0% | |
| TTTGAAGGTCTCTCCAGAGT+CGG | + | chr3.3:66523984-66524003 | MS.gene022258:intron | 45.0% | |
| TTTGCAGATATTGACACGCC+AGG | - | chr3.3:66526128-66526147 | None:intergenic | 45.0% | |
| ! | AACAGGGAGTTTAAGGTCGT+TGG | - | chr3.3:66522907-66522926 | None:intergenic | 45.0% |
| ! | AACTGTTTCTTCCCTGCAAG+AGG | - | chr3.3:66525434-66525453 | None:intergenic | 45.0% |
| ! | CCGACATTTAAGGTCTTGTG+TGG | - | chr3.3:66527601-66527620 | None:intergenic | 45.0% |
| ! | GAGTTTAAGGTCGTTGGAGA+TGG | - | chr3.3:66522901-66522920 | None:intergenic | 45.0% |
| ! | GGGAACAATACTGGTTGTCA+AGG | + | chr3.3:66523880-66523899 | MS.gene022258:CDS | 45.0% |
| ! | TTTTCCTCTGCCACAAATGC+TGG | + | chr3.3:66523675-66523694 | MS.gene022258:CDS | 45.0% |
| !! | ACATCTAGTTCTCTACCCCA+AGG | + | chr3.3:66525755-66525774 | MS.gene022258:intron | 45.0% |
| !! | AGTTGGATTAGTGGCCAGTT+TGG | + | chr3.3:66523179-66523198 | MS.gene022258:intron | 45.0% |
| !! | AGTTGGTAGTACATCTGAGG+AGG | + | chr3.3:66525078-66525097 | MS.gene022258:intron | 45.0% |
| !! | TTGAGGGTGTTTCTTCTCAG+CGG | + | chr3.3:66524256-66524275 | MS.gene022258:CDS | 45.0% |
| AAGCAATGCAGCAGGACACA+AGG | + | chr3.3:66524493-66524512 | MS.gene022258:CDS | 50.0% | |
| ACGGATGCACCTTTGCTGAT+GGG | - | chr3.3:66525702-66525721 | None:intergenic | 50.0% | |
| AGGTGAATCTGTTGCCGTTG+AGG | + | chr3.3:66527543-66527562 | MS.gene022258:intron | 50.0% | |
| ATCTGTTGCCGTTGAGGATG+AGG | + | chr3.3:66527549-66527568 | MS.gene022258:CDS | 50.0% | |
| ATTACCTTACCTCCGGTGGA+GGG | + | chr3.3:66526693-66526712 | MS.gene022258:intron | 50.0% | |
| CAGCAGTAGGGAAGAGAGAA+AGG | - | chr3.3:66524142-66524161 | None:intergenic | 50.0% | |
| CGTCACCCTCAACATTGCTA+TGG | - | chr3.3:66526916-66526935 | None:intergenic | 50.0% | |
| CTGCAAGCTTACCTGATTGC+AGG | + | chr3.3:66524176-66524195 | MS.gene022258:intron | 50.0% | |
| CTGCTGCATTGCTTCAAAGC+TGG | - | chr3.3:66524487-66524506 | None:intergenic | 50.0% | |
| GAGAGTTGTGGCGGTTATCA+TGG | + | chr3.3:66522603-66522622 | MS.gene022258:CDS | 50.0% | |
| GAGTGGGATGCTTCTCATAC+AGG | - | chr3.3:66526517-66526536 | None:intergenic | 50.0% | |
| GATATCCTCTCACCTCTTGC+AGG | + | chr3.3:66525419-66525438 | MS.gene022258:CDS | 50.0% | |
| GCAAATGCTCGTATAGGAGC+TGG | + | chr3.3:66526143-66526162 | MS.gene022258:CDS | 50.0% | |
| GGAAATCCTCCATTGGACGA+TGG | + | chr3.3:66526323-66526342 | MS.gene022258:CDS | 50.0% | |
| GGCCAGTGAATTTGGCGAAT+TGG | + | chr3.3:66524005-66524024 | MS.gene022258:CDS | 50.0% | |
| GTTGTGGCGGTTATCATGGT+TGG | + | chr3.3:66522607-66522626 | MS.gene022258:CDS | 50.0% | |
| TAGGATTACCTTACCTCCGG+TGG | + | chr3.3:66526689-66526708 | MS.gene022258:intron | 50.0% | |
| TCAACGGCAACAGATTCACC+TGG | - | chr3.3:66527544-66527563 | None:intergenic | 50.0% | |
| TCCATTAGCTGGACAACCCA+TGG | + | chr3.3:66522690-66522709 | MS.gene022258:CDS | 50.0% | |
| TCTTCTCAGCGGAAAGACAG+AGG | + | chr3.3:66524267-66524286 | MS.gene022258:CDS | 50.0% | |
| TGCAGAAGAGAGAGTTGTGG+CGG | + | chr3.3:66522594-66522613 | MS.gene022258:CDS | 50.0% | |
| TGGTGGCATGGGAACAATAC+TGG | + | chr3.3:66523871-66523890 | MS.gene022258:CDS | 50.0% | |
| TGTCATCATGGAGGAGGATC+CGG | + | chr3.3:66523527-66523546 | MS.gene022258:CDS | 50.0% | |
| TTACCCAGCATTTGTGGCAG+AGG | - | chr3.3:66523682-66523701 | None:intergenic | 50.0% | |
| TTGAAGGAGGACAAGCCTCA+TGG | + | chr3.3:66523474-66523493 | MS.gene022258:CDS | 50.0% | |
| ! | AAAGGTGCATCCGTCTGCAA+AGG | + | chr3.3:66525708-66525727 | MS.gene022258:CDS | 50.0% |
| ! | ACCATGGGTTGTCCAGCTAA+TGG | - | chr3.3:66522694-66522713 | None:intergenic | 50.0% |
| ! | GTGGTTGAACAGATTGGTCC+TGG | + | chr3.3:66526107-66526126 | MS.gene022258:intron | 50.0% |
| ! | TGCAGGAGTTCATTGGTGAC+TGG | - | chr3.3:66524039-66524058 | None:intergenic | 50.0% |
| !! | CAGCTTTGAAGCAATGCAGC+AGG | + | chr3.3:66524485-66524504 | MS.gene022258:CDS | 50.0% |
| ACGGAATCGAGTGCCTTTGG+TGG | - | chr3.3:66522638-66522657 | None:intergenic | 55.0% | |
| AGACCACCAGCAGAACCATG+AGG | - | chr3.3:66523492-66523511 | None:intergenic | 55.0% | |
| CCAGAGTCGGCCAGTGAATT+TGG | + | chr3.3:66523997-66524016 | MS.gene022258:CDS | 55.0% | |
| CGGAATCGAGTGCCTTTGGT+GGG | - | chr3.3:66522637-66522656 | None:intergenic | 55.0% | |
| GACGGATGCACCTTTGCTGA+TGG | - | chr3.3:66525703-66525722 | None:intergenic | 55.0% | |
| GATTACCTTACCTCCGGTGG+AGG | + | chr3.3:66526692-66526711 | MS.gene022258:intron | 55.0% | |
| GGAATCGAGTGCCTTTGGTG+GGG | - | chr3.3:66522636-66522655 | None:intergenic | 55.0% | |
| GTGGCGGTTATCATGGTTGG+AGG | + | chr3.3:66522610-66522629 | MS.gene022258:CDS | 55.0% | |
| TCTTCCCTGCAAGAGGTGAG+AGG | - | chr3.3:66525427-66525446 | None:intergenic | 55.0% | |
| TGCCGTTGAGGATGAGGTAG+TGG | + | chr3.3:66527555-66527574 | MS.gene022258:CDS | 55.0% | |
| TGGACGGAATCGAGTGCCTT+TGG | - | chr3.3:66522641-66522660 | None:intergenic | 55.0% | |
| ! | AAGCCTCATGGTTCTGCTGG+TGG | + | chr3.3:66523486-66523505 | MS.gene022258:CDS | 55.0% |
| ! | CCAAATTCACTGGCCGACTC+TGG | - | chr3.3:66524000-66524019 | None:intergenic | 55.0% |
| ! | GACAAGCCTCATGGTTCTGC+TGG | + | chr3.3:66523483-66523502 | MS.gene022258:CDS | 55.0% |
| ACGTGCCCATCGTCCAATGG+AGG | - | chr3.3:66526332-66526351 | None:intergenic | 60.0% | |
| ATGGTTGGAGGCCCCACCAA+AGG | + | chr3.3:66522622-66522641 | MS.gene022258:CDS | 60.0% | |
| CAATAGGTTCCCTCCACCGG+AGG | - | chr3.3:66526705-66526724 | None:intergenic | 60.0% | |
| GACACGTGCCCATCGTCCAA+TGG | - | chr3.3:66526335-66526354 | None:intergenic | 60.0% | |
| GGCACGTGTCCAGGCAAGTT+TGG | + | chr3.3:66526345-66526364 | MS.gene022258:intron | 60.0% | |
| ACTCCCTGCCCATACCTGCG+AGG | + | chr3.3:66525999-66526018 | MS.gene022258:intron | 65.0% | |
| AGGTCCTCGCAGGTATGGGC+AGG | - | chr3.3:66526006-66526025 | None:intergenic | 65.0% | |
| CGCAGGTATGGGCAGGGAGT+AGG | - | chr3.3:66525999-66526018 | None:intergenic | 65.0% | |
| GGTCCTCGCAGGTATGGGCA+GGG | - | chr3.3:66526005-66526024 | None:intergenic | 65.0% | |
| GGTTCCCTCCACCGGAGGTA+AGG | - | chr3.3:66526700-66526719 | None:intergenic | 65.0% | |
| TGGACGATGGGCACGTGTCC+AGG | + | chr3.3:66526336-66526355 | MS.gene022258:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 66522586 | 66527645 | 66522586 | ID=MS.gene022258 |
| chr3.3 | mRNA | 66522586 | 66527645 | 66522586 | ID=MS.gene022258.t1;Parent=MS.gene022258 |
| chr3.3 | exon | 66522586 | 66522741 | 66522586 | ID=MS.gene022258.t1.exon1;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66522586 | 66522741 | 66522586 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66522828 | 66522928 | 66522828 | ID=MS.gene022258.t1.exon2;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66522828 | 66522928 | 66522828 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66523470 | 66523548 | 66523470 | ID=MS.gene022258.t1.exon3;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66523470 | 66523548 | 66523470 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66523637 | 66523697 | 66523637 | ID=MS.gene022258.t1.exon4;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66523637 | 66523697 | 66523637 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66523855 | 66523901 | 66523855 | ID=MS.gene022258.t1.exon5;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66523855 | 66523901 | 66523855 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66523991 | 66524083 | 66523991 | ID=MS.gene022258.t1.exon6;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66523991 | 66524083 | 66523991 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66524198 | 66524288 | 66524198 | ID=MS.gene022258.t1.exon7;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66524198 | 66524288 | 66524198 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66524466 | 66524514 | 66524466 | ID=MS.gene022258.t1.exon8;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66524466 | 66524514 | 66524466 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66525385 | 66525501 | 66525385 | ID=MS.gene022258.t1.exon9;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66525385 | 66525501 | 66525385 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66525582 | 66525729 | 66525582 | ID=MS.gene022258.t1.exon10;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66525582 | 66525729 | 66525582 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66526119 | 66526211 | 66526119 | ID=MS.gene022258.t1.exon11;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66526119 | 66526211 | 66526119 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66526289 | 66526357 | 66526289 | ID=MS.gene022258.t1.exon12;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66526289 | 66526357 | 66526289 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66527046 | 66527088 | 66527046 | ID=MS.gene022258.t1.exon13;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66527046 | 66527088 | 66527046 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| chr3.3 | exon | 66527545 | 66527645 | 66527545 | ID=MS.gene022258.t1.exon14;Parent=MS.gene022258.t1 |
| chr3.3 | CDS | 66527545 | 66527645 | 66527545 | ID=cds.MS.gene022258.t1;Parent=MS.gene022258.t1 |
| Gene Sequence |
| Protein sequence |
