AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene026210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026210.t1 MTR_1g037550 90.449 534 25 2 1 508 20 553 0.0 945
MS.gene026210.t1 MTR_1g037560 79.699 532 82 2 1 508 20 549 0.0 847
MS.gene026210.t1 MTR_4g075110 72.571 525 117 3 8 508 34 555 0.0 775
MS.gene026210.t1 MTR_7g406990 71.223 417 80 6 1 384 1 410 0.0 557
MS.gene026210.t1 MTR_8g030590 42.941 510 252 9 24 502 9 510 9.01e-132 393
MS.gene026210.t1 MTR_8g098435 41.569 510 254 10 24 502 9 505 5.63e-128 383
MS.gene026210.t1 MTR_7g033570 39.130 506 267 7 21 502 6 494 1.12e-125 376
MS.gene026210.t1 MTR_7g033580 39.842 507 262 9 21 502 6 494 4.11e-124 372
MS.gene026210.t1 MTR_8g088470 37.376 503 275 6 24 502 5 491 1.15e-120 363
MS.gene026210.t1 MTR_5g070010 40.514 506 252 10 31 502 18 508 2.66e-117 355
MS.gene026210.t1 MTR_1g035670 36.739 509 289 7 19 503 4 503 1.97e-113 345
MS.gene026210.t1 MTR_3g463060 39.757 493 222 11 49 499 40 499 4.24e-112 342
MS.gene026210.t1 MTR_1g035760 37.602 492 285 10 19 503 4 480 1.37e-111 340
MS.gene026210.t1 MTR_6g004600 35.328 518 285 10 25 502 8 515 2.21e-111 340
MS.gene026210.t1 MTR_1g035750 36.224 519 281 9 19 503 4 506 9.82e-111 338
MS.gene026210.t1 MTR_1g036130 36.187 514 289 9 19 503 4 507 2.45e-110 337
MS.gene026210.t1 MTR_1g035790 37.380 519 281 14 13 503 1 503 4.53e-109 334
MS.gene026210.t1 MTR_1g036200 36.024 508 276 11 28 503 10 500 2.97e-108 332
MS.gene026210.t1 MTR_7g088330 39.453 512 261 17 24 502 13 508 9.41e-107 328
MS.gene026210.t1 MTR_6g004590 33.714 525 304 8 12 502 1 515 3.54e-105 324
MS.gene026210.t1 MTR_1g050362 36.024 508 283 11 28 503 10 507 8.58e-104 320
MS.gene026210.t1 MTR_1g035830 35.577 520 283 11 19 502 4 507 7.41e-103 318
MS.gene026210.t1 MTR_6g004670 35.019 514 284 10 22 502 9 505 2.85e-102 316
MS.gene026210.t1 MTR_1g036010 34.884 516 292 13 19 502 4 507 5.01e-102 316
MS.gene026210.t1 MTR_7g096340 37.143 490 248 13 47 503 41 503 2.20e-101 314
MS.gene026210.t1 MTR_4g119660 36.902 523 275 11 24 503 6 516 7.97e-101 313
MS.gene026210.t1 MTR_1g035940 35.328 518 287 14 19 502 4 507 3.37e-100 311
MS.gene026210.t1 MTR_5g019140 36.260 524 278 12 24 503 20 531 4.37e-100 311
MS.gene026210.t1 MTR_6g004630 35.785 503 268 14 34 502 22 503 7.48e-100 310
MS.gene026210.t1 MTR_1g035580 34.517 507 306 9 13 503 1 497 1.64e-99 309
MS.gene026210.t1 MTR_1g035800 35.271 516 293 9 20 502 5 512 9.56e-99 307
MS.gene026210.t1 MTR_1g036270 35.534 515 279 14 27 502 11 511 1.29e-98 307
MS.gene026210.t1 MTR_2g086040 40.230 435 209 9 91 499 86 495 5.74e-96 300
MS.gene026210.t1 MTR_4g054920 38.789 446 215 10 94 502 92 516 5.86e-96 300
MS.gene026210.t1 MTR_8g035780 36.907 485 262 11 49 504 43 512 1.47e-94 296
MS.gene026210.t1 MTR_3g080580 39.597 447 218 11 93 502 86 517 3.17e-94 296
MS.gene026210.t1 MTR_7g096320 36.937 444 250 8 77 502 72 503 1.07e-93 294
MS.gene026210.t1 MTR_6g004610 33.906 466 266 9 64 501 11 462 5.09e-92 289
MS.gene026210.t1 MTR_1g070345 37.644 433 241 9 93 506 86 508 7.51e-92 290
MS.gene026210.t1 MTR_1g102220 38.356 438 239 11 89 502 76 506 2.75e-91 288
MS.gene026210.t1 MTR_8g035810 36.444 450 243 10 79 498 70 506 1.17e-88 281
MS.gene026210.t1 MTR_8g035860 37.674 430 233 9 93 495 81 502 3.44e-88 280
MS.gene026210.t1 MTR_1g070365 36.049 491 271 15 39 502 30 504 1.97e-87 278
MS.gene026210.t1 MTR_8g035820 34.739 498 285 12 25 495 18 502 1.70e-86 276
MS.gene026210.t1 MTR_8g035760 35.604 455 242 12 79 502 77 511 3.37e-86 275
MS.gene026210.t1 MTR_1g060550 37.188 441 225 12 93 502 93 512 3.69e-86 275
MS.gene026210.t1 MTR_8g035680 35.920 451 237 13 79 497 77 507 2.48e-85 273
MS.gene026210.t1 MTR_7g029275 33.524 525 298 12 9 502 4 508 2.41e-83 267
MS.gene026210.t1 MTR_1g035860 32.360 445 268 6 24 444 15 450 2.49e-77 251
MS.gene026210.t1 MTR_8g035810 35.949 395 211 9 79 444 70 451 2.15e-73 240
MS.gene026210.t1 MTR_1g069715 33.411 428 231 13 100 490 2 412 8.17e-69 233
MS.gene026210.t1 MTR_8g035680 34.232 371 196 11 159 497 6 360 1.40e-63 211
MS.gene026210.t1 MTR_1g102210 36.335 322 191 7 184 502 51 361 2.41e-62 208
MS.gene026210.t1 MTR_4g012320 48.958 192 90 3 311 501 38 222 1.20e-57 191
MS.gene026210.t1 MTR_8g035810 32.416 327 180 8 79 376 70 384 1.01e-46 167
MS.gene026210.t1 MTR_1g070370 37.247 247 135 5 185 420 5 242 1.44e-42 152
MS.gene026210.t1 MTR_7g079440 24.891 458 294 20 77 507 219 653 1.66e-31 129
MS.gene026210.t1 MTR_5g009110 23.326 463 295 14 93 503 117 571 4.75e-26 112
MS.gene026210.t1 MTR_8g046580 50.495 101 49 1 377 477 193 292 6.13e-26 108
MS.gene026210.t1 MTR_8g046580 30.345 145 87 2 99 243 61 191 8.28e-18 84.7
MS.gene026210.t1 MTR_8g035790 51.485 101 45 3 406 504 1 99 6.45e-26 102
MS.gene026210.t1 MTR_2g061750 33.690 187 102 5 91 260 13 194 4.48e-24 100
MS.gene026210.t1 MTR_2g061740 33.690 187 102 5 91 260 13 194 5.29e-24 100
MS.gene026210.t1 MTR_5g009110 23.488 430 270 13 126 503 1 423 2.45e-23 102
MS.gene026210.t1 MTR_6g084040 34.463 177 92 7 27 200 11 166 4.38e-22 93.6
MS.gene026210.t1 MTR_7g006900 20.892 426 289 11 96 500 72 470 1.12e-21 98.2
MS.gene026210.t1 MTR_1g062190 22.299 435 300 13 91 502 120 539 2.44e-21 97.8
MS.gene026210.t1 MTR_2g055430 23.025 443 288 13 86 501 101 517 9.46e-20 92.8
MS.gene026210.t1 MTR_7g079440 23.784 370 242 16 77 425 219 569 2.01e-19 92.0
MS.gene026210.t1 MTR_6g017325 22.525 404 249 13 126 500 137 505 2.23e-19 91.7
MS.gene026210.t1 MTR_2g055470 22.799 443 289 15 86 501 101 517 3.29e-18 87.8
MS.gene026210.t1 MTR_8g042000 22.323 439 296 13 86 501 107 523 3.81e-18 87.8
MS.gene026210.t1 MTR_5g095260 25.183 409 258 15 91 475 85 469 5.46e-17 84.0
MS.gene026210.t1 MTR_6g042540 23.837 516 317 18 16 481 3 492 1.03e-16 83.2
MS.gene026210.t1 MTR_2g072270 24.304 395 258 11 125 497 143 518 1.20e-16 83.2
MS.gene026210.t1 MTR_2g023680 21.868 439 298 12 86 501 101 517 1.70e-16 82.4
MS.gene026210.t1 MTR_2g072260 24.201 438 289 14 86 501 94 510 2.87e-16 82.0
MS.gene026210.t1 MTR_2g072400 23.077 442 290 16 86 501 98 515 2.99e-16 81.6
MS.gene026210.t1 MTR_6g042610 22.631 517 323 19 16 481 3 493 4.02e-16 81.6
MS.gene026210.t1 MTR_1g023040 40.411 146 53 5 196 336 13 129 4.04e-16 75.9
MS.gene026210.t1 MTR_0171s0030 25.000 396 253 13 128 495 31 410 5.38e-16 80.5
MS.gene026210.t1 MTR_8g104100 34.884 129 82 2 353 481 109 235 7.29e-16 78.2
MS.gene026210.t1 MTR_3g436540 22.457 521 302 20 12 475 2 477 8.09e-16 80.5
MS.gene026210.t1 MTR_6g072490 20.698 401 281 11 112 495 126 506 8.14e-16 80.5
MS.gene026210.t1 MTR_2g072340 22.449 441 294 14 86 501 98 515 1.21e-15 80.1
MS.gene026210.t1 MTR_1g037370 26.697 221 142 6 249 456 230 443 1.32e-15 79.7
MS.gene026210.t1 MTR_7g012330 23.450 371 227 14 128 468 117 460 1.93e-15 79.3
MS.gene026210.t1 MTR_2g010290 27.347 245 159 8 269 502 296 532 1.93e-15 79.3
MS.gene026210.t1 MTR_7g103450 26.071 280 156 12 250 501 250 506 2.06e-15 79.3
MS.gene026210.t1 MTR_8g080520 22.133 497 320 18 38 502 64 525 2.06e-15 79.3
MS.gene026210.t1 MTR_5g009110 23.353 334 225 9 93 402 117 443 2.55e-15 78.6
MS.gene026210.t1 MTR_5g070920 30.488 164 104 4 334 497 337 490 4.54e-15 78.2
MS.gene026210.t1 MTR_5g095290 23.342 407 267 14 91 475 85 468 6.11e-15 77.8
MS.gene026210.t1 MTR_2g062670 36.095 169 94 5 173 328 56 223 6.76e-15 77.4
MS.gene026210.t1 MTR_2g062670 35.669 157 72 6 173 328 272 400 3.10e-12 69.3
MS.gene026210.t1 MTR_6g008500 29.078 141 95 4 335 473 364 501 9.50e-15 77.0
MS.gene026210.t1 MTR_6g008650 31.056 161 104 5 324 481 343 499 1.06e-14 77.0
MS.gene026210.t1 MTR_1g107300 30.469 128 87 2 352 479 49 174 1.10e-14 73.6
MS.gene026210.t1 MTR_1g101040 20.395 456 312 14 72 497 76 510 1.14e-14 77.0
MS.gene026210.t1 MTR_2g010250 30.319 188 119 6 319 502 326 505 1.23e-14 76.6
MS.gene026210.t1 MTR_7g075610 21.188 505 310 18 21 477 9 473 1.26e-14 76.6
MS.gene026210.t1 MTR_8g042020 21.491 456 298 14 74 501 99 522 1.42e-14 76.6
MS.gene026210.t1 MTR_5g026520 23.973 292 176 6 245 502 229 508 1.77e-14 76.3
MS.gene026210.t1 MTR_1g085680 22.122 443 284 15 86 497 99 511 2.10e-14 75.9
MS.gene026210.t1 MTR_2g073440 26.943 193 128 3 283 475 269 448 2.22e-14 75.9
MS.gene026210.t1 MTR_6g008640 24.088 274 179 10 231 481 230 497 2.60e-14 75.9
MS.gene026210.t1 MTR_2g073480 26.943 193 128 3 283 475 202 381 3.23e-14 74.7
MS.gene026210.t1 MTR_6g008530 24.691 243 160 7 250 473 257 495 4.97e-14 75.1
MS.gene026210.t1 MTR_6g008430 28.125 160 110 4 324 481 336 492 5.03e-14 74.7
MS.gene026210.t1 MTR_5g034900 28.723 188 122 5 318 502 339 517 5.09e-14 74.7
MS.gene026210.t1 MTR_5g095230 21.029 447 292 15 86 501 97 513 5.16e-14 74.7
MS.gene026210.t1 MTR_6g084770 22.938 497 310 21 14 468 1 466 6.20e-14 74.7
MS.gene026210.t1 MTR_2g072250 21.477 447 290 13 86 501 97 513 6.49e-14 74.3
MS.gene026210.t1 MTR_8g098565 29.787 188 120 5 320 502 326 506 7.78e-14 74.3
MS.gene026210.t1 MTR_5g070690 27.869 183 117 5 335 507 332 509 7.83e-14 74.3
MS.gene026210.t1 MTR_5g070800 27.869 183 117 5 335 507 332 509 7.83e-14 74.3
MS.gene026210.t1 MTR_8g104030 33.621 116 75 2 353 468 128 241 8.96e-14 72.4
MS.gene026210.t1 MTR_3g076560 22.454 432 286 16 93 498 96 504 9.34e-14 73.9
MS.gene026210.t1 MTR_2g073420 26.906 223 144 7 259 468 253 469 1.09e-13 73.9
MS.gene026210.t1 MTR_7g092620 24.429 438 285 16 89 495 75 497 1.37e-13 73.6
MS.gene026210.t1 MTR_5g056720 25.292 257 169 10 250 501 176 414 1.45e-13 73.2
MS.gene026210.t1 MTR_8g042060 20.320 438 306 11 86 501 107 523 1.87e-13 73.2
MS.gene026210.t1 MTR_5g094520 23.058 412 260 13 93 475 116 499 2.06e-13 73.2
MS.gene026210.t1 MTR_4g031820 23.691 401 248 14 125 494 147 520 2.08e-13 72.8
MS.gene026210.t1 MTR_4g031820 23.650 389 241 13 125 494 147 498 2.14e-13 72.8
MS.gene026210.t1 MTR_5g070830 25.746 268 170 11 250 497 343 601 2.14e-13 73.2
MS.gene026210.t1 MTR_3g467290 26.693 251 145 9 230 452 239 478 2.84e-13 72.4
MS.gene026210.t1 MTR_5g094520 23.058 412 260 13 93 475 11 394 2.91e-13 72.0
MS.gene026210.t1 MTR_6g084900 31.148 122 81 3 348 468 109 228 3.82e-13 70.1
MS.gene026210.t1 MTR_5g070710 24.895 237 161 6 264 497 266 488 4.40e-13 72.0
MS.gene026210.t1 MTR_1g101050 19.315 409 277 12 112 495 124 504 4.60e-13 72.0
MS.gene026210.t1 MTR_3g436390 27.742 155 108 3 323 475 318 470 5.41e-13 71.6
MS.gene026210.t1 MTR_8g042040 21.564 422 303 11 86 501 107 506 5.57e-13 71.6
MS.gene026210.t1 MTR_4g104550 23.002 413 267 11 87 471 67 456 7.24e-13 71.2
MS.gene026210.t1 MTR_1g055325 24.742 194 129 6 289 468 289 479 1.07e-12 70.5
MS.gene026210.t1 MTR_2g450040 30.822 146 96 4 335 478 345 487 1.24e-12 70.5
MS.gene026210.t1 MTR_8g063280 23.664 262 162 9 269 502 247 498 1.28e-12 70.5
MS.gene026210.t1 MTR_5g070700 29.032 186 118 5 312 497 320 491 1.40e-12 70.5
MS.gene026210.t1 MTR_0022s0290 32.680 153 90 3 319 471 341 480 1.41e-12 70.5
MS.gene026210.t1 MTR_1g023730 23.256 430 257 14 92 475 77 479 1.50e-12 70.1
MS.gene026210.t1 MTR_3g025260 21.456 261 156 7 243 472 229 471 1.59e-12 70.1
MS.gene026210.t1 MTR_3g024520 21.770 418 261 14 128 508 114 502 1.60e-12 70.1
MS.gene026210.t1 MTR_4g018800 22.594 478 286 17 48 473 46 491 1.75e-12 70.1
MS.gene026210.t1 MTR_3g057910 22.939 279 192 8 241 504 225 495 2.19e-12 69.7
MS.gene026210.t1 MTR_6g008600 23.140 242 164 8 250 473 256 493 2.34e-12 69.7
MS.gene026210.t1 MTR_5g070850 22.656 256 158 6 250 478 233 475 2.70e-12 69.3
MS.gene026210.t1 MTR_5g021390 25.103 243 152 7 250 468 238 474 2.88e-12 69.3
MS.gene026210.t1 MTR_5g070973 26.380 163 115 4 335 497 5 162 3.65e-12 65.5
MS.gene026210.t1 MTR_3g025230 21.770 418 261 14 128 508 114 502 3.77e-12 68.9
MS.gene026210.t1 MTR_8g027040 22.263 274 167 7 256 502 291 545 4.12e-12 68.9
MS.gene026210.t1 MTR_6g022450 31.008 129 87 2 348 475 353 480 4.57e-12 68.6
MS.gene026210.t1 MTR_2g061910 40.244 82 49 0 93 174 72 153 4.67e-12 64.7
MS.gene026210.t1 MTR_5g094550 20.833 408 274 11 93 475 85 468 4.93e-12 68.6
MS.gene026210.t1 MTR_4g102280 21.029 447 309 14 78 495 70 501 6.05e-12 68.2
MS.gene026210.t1 MTR_2g061760 34.653 101 63 2 162 260 1 100 6.66e-12 62.8
MS.gene026210.t1 MTR_0147s0030 21.182 406 261 15 125 501 155 530 6.68e-12 68.2
MS.gene026210.t1 MTR_7g098550 19.816 434 296 7 86 501 97 496 6.85e-12 68.2
MS.gene026210.t1 MTR_7g075580 26.277 137 98 3 335 471 333 466 8.31e-12 67.8
MS.gene026210.t1 MTR_5g070840 28.358 134 94 2 335 468 5 136 8.78e-12 64.3
MS.gene026210.t1 MTR_4g088400 23.735 257 166 11 244 481 249 494 9.00e-12 67.8
MS.gene026210.t1 MTR_4g089030 21.083 517 319 21 6 475 11 485 1.09e-11 67.4
MS.gene026210.t1 MTR_3g014880 21.978 273 188 8 231 481 231 500 1.10e-11 67.4
MS.gene026210.t1 MTR_7g012860 23.989 371 227 10 128 468 116 461 1.52e-11 67.0
MS.gene026210.t1 MTR_0287s0060 23.989 371 227 10 128 468 116 461 1.52e-11 67.0
MS.gene026210.t1 MTR_7g098550 20.413 436 299 8 86 501 97 504 2.34e-11 66.6
MS.gene026210.t1 MTR_4g104570 30.075 133 91 2 340 472 35 165 2.35e-11 63.5
MS.gene026210.t1 MTR_4g026050 22.177 496 296 19 29 475 10 464 2.46e-11 66.2
MS.gene026210.t1 MTR_8g012590 24.051 237 153 8 237 456 224 450 4.10e-11 65.9
MS.gene026210.t1 MTR_8g468780 22.991 448 278 14 89 495 7 428 4.45e-11 65.5
MS.gene026210.t1 MTR_4g104640 20.580 379 239 17 131 475 135 485 4.56e-11 65.5
MS.gene026210.t1 MTR_5g094560 22.794 408 266 14 93 475 85 468 5.48e-11 65.1
MS.gene026210.t1 MTR_5g470730 33.684 95 62 1 335 429 334 427 6.42e-11 64.7
MS.gene026210.t1 MTR_8g042060 19.954 436 274 12 86 501 107 487 7.64e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026210.t1 AT5G23190 64.000 525 160 4 8 507 25 545 0.0 687
MS.gene026210.t1 AT5G08250 62.335 531 162 7 6 507 24 545 0.0 673
MS.gene026210.t1 AT5G08250 64.008 489 138 7 48 507 4 483 0.0 640
MS.gene026210.t1 AT1G24540 42.125 527 263 8 8 502 4 520 1.96e-149 438
MS.gene026210.t1 AT3G26125 42.424 495 244 8 47 506 48 536 4.79e-138 409
MS.gene026210.t1 AT1G13140 39.962 533 279 10 6 509 12 532 5.51e-137 407
MS.gene026210.t1 AT1G13140 40.909 506 286 9 6 509 12 506 1.20e-132 394
MS.gene026210.t1 AT1G63710 42.829 509 251 9 24 502 9 507 1.64e-132 395
MS.gene026210.t1 AT1G13150 41.260 492 254 7 43 506 37 521 1.46e-131 392
MS.gene026210.t1 AT1G01600 41.296 494 256 6 39 502 24 513 1.24e-125 378
MS.gene026210.t1 AT4G00360 40.808 495 255 9 39 502 24 511 1.82e-123 372
MS.gene026210.t1 AT2G45970 40.392 510 265 10 24 502 9 510 1.12e-122 370
MS.gene026210.t1 AT4G39490 38.685 517 282 8 19 503 4 517 1.19e-122 369
MS.gene026210.t1 AT5G58860 39.729 516 257 8 25 504 13 510 3.34e-121 365
MS.gene026210.t1 AT2G23180 37.743 514 289 9 19 504 4 514 9.77e-118 357
MS.gene026210.t1 AT2G21910 36.561 506 296 9 19 502 4 506 1.73e-110 338
MS.gene026210.t1 AT4G39480 38.178 516 283 9 19 503 4 514 1.04e-108 333
MS.gene026210.t1 AT5G52320 34.719 481 296 8 36 501 24 501 1.99e-105 324
MS.gene026210.t1 AT1G57750 36.059 477 286 8 40 502 25 496 3.65e-105 323
MS.gene026210.t1 AT5G52320 34.874 476 292 8 36 496 24 496 1.54e-104 322
MS.gene026210.t1 AT1G34540 38.866 494 251 11 39 502 25 497 1.20e-102 317
MS.gene026210.t1 AT1G65340 34.746 472 290 8 45 501 34 502 2.45e-102 317
MS.gene026210.t1 AT4G32170 33.399 506 315 8 18 504 3 505 5.19e-102 316
MS.gene026210.t1 AT1G69500 37.406 532 269 14 24 503 5 524 6.04e-102 316
MS.gene026210.t1 AT3G56630 38.833 497 250 15 38 502 24 498 6.99e-101 313
MS.gene026210.t1 AT1G47620 33.265 487 286 7 47 505 43 518 2.48e-100 312
MS.gene026210.t1 AT4G39500 32.874 508 318 8 17 503 12 517 3.84e-99 309
MS.gene026210.t1 AT4G39510 32.806 506 316 8 19 503 4 506 1.76e-96 301
MS.gene026210.t1 AT5G63450 40.553 434 225 10 93 504 84 506 2.83e-95 298
MS.gene026210.t1 AT5G63450 40.553 434 225 10 93 504 142 564 2.49e-94 298
MS.gene026210.t1 AT2G45510 36.382 503 275 12 22 495 15 501 3.48e-93 293
MS.gene026210.t1 AT3G48520 38.549 441 249 9 85 512 74 505 1.37e-92 291
MS.gene026210.t1 AT4G39500 33.898 472 286 8 53 503 1 467 1.79e-92 290
MS.gene026210.t1 AT2G44890 38.789 446 230 10 79 495 70 501 7.15e-90 285
MS.gene026210.t1 AT2G27690 36.239 436 227 7 90 499 73 483 1.86e-85 273
MS.gene026210.t1 AT2G44890 37.444 446 218 11 79 495 70 483 1.95e-82 265
MS.gene026210.t1 AT5G02900 31.853 518 281 12 18 503 3 480 1.32e-79 257
MS.gene026210.t1 AT1G57750 32.388 423 267 8 29 437 14 431 3.27e-79 254
MS.gene026210.t1 AT3G01900 31.818 484 299 10 35 502 22 490 2.04e-76 249
MS.gene026210.t1 AT4G15110 23.377 462 297 17 93 503 124 579 7.28e-22 99.4
MS.gene026210.t1 AT3G53130 21.729 428 311 11 91 502 120 539 7.30e-22 99.4
MS.gene026210.t1 AT3G14650 23.434 431 283 16 86 494 99 504 6.06e-19 90.1
MS.gene026210.t1 AT4G13290 24.599 374 226 11 128 475 115 458 2.38e-18 88.2
MS.gene026210.t1 AT4G13310 23.978 367 245 10 128 475 114 465 4.30e-18 87.4
MS.gene026210.t1 AT3G48310 21.934 424 267 15 87 479 71 461 8.41e-18 86.7
MS.gene026210.t1 AT1G66030 29.940 167 98 4 19 175 4 161 1.70e-17 80.5
MS.gene026210.t1 AT3G48270 22.794 408 267 11 87 471 70 452 3.91e-17 84.3
MS.gene026210.t1 AT5G38450 30.120 166 110 3 335 500 355 514 4.51e-17 84.3
MS.gene026210.t1 AT2G46950 23.059 438 255 15 102 499 172 567 4.91e-17 84.3
MS.gene026210.t1 AT3G48300 21.957 419 271 14 87 478 68 457 5.36e-17 84.0
MS.gene026210.t1 AT3G48300 21.957 419 271 14 87 478 70 459 5.41e-17 84.0
MS.gene026210.t1 AT2G26710 23.113 424 274 15 111 506 120 519 6.36e-17 84.0
MS.gene026210.t1 AT2G45570 23.614 415 276 13 87 475 77 476 1.32e-16 82.8
MS.gene026210.t1 AT3G48290 22.356 416 259 11 87 471 72 454 2.05e-16 82.4
MS.gene026210.t1 AT1G64930 27.807 187 120 4 315 497 328 503 2.44e-16 82.0
MS.gene026210.t1 AT1G33730 26.953 256 150 7 244 475 97 339 3.25e-16 80.9
MS.gene026210.t1 AT1G33730 26.953 256 150 7 244 475 97 339 3.25e-16 80.9
MS.gene026210.t1 AT4G12300 22.485 507 340 17 2 479 1 483 6.18e-16 80.9
MS.gene026210.t1 AT3G14620 23.434 431 282 16 86 494 103 507 9.43e-16 80.5
MS.gene026210.t1 AT2G30770 23.460 422 261 16 87 475 72 464 1.08e-15 80.1
MS.gene026210.t1 AT1G33720 26.562 256 151 7 244 475 233 475 1.15e-15 80.1
MS.gene026210.t1 AT1G33720 26.562 256 151 7 244 475 101 343 1.28e-15 79.0
MS.gene026210.t1 AT1G33720 26.562 256 151 7 244 475 101 343 1.28e-15 79.0
MS.gene026210.t1 AT1G33720 26.562 256 151 7 244 475 101 343 1.28e-15 79.0
MS.gene026210.t1 AT1G64940 27.568 185 121 4 315 497 330 503 1.45e-15 79.7
MS.gene026210.t1 AT2G46960 19.816 434 312 12 86 500 99 515 1.51e-15 79.7
MS.gene026210.t1 AT3G48280 22.500 360 242 8 135 477 119 458 2.39e-15 79.0
MS.gene026210.t1 AT1G64950 25.357 280 180 8 245 497 225 502 2.84e-15 79.0
MS.gene026210.t1 AT1G67110 28.188 149 102 2 352 500 365 508 4.70e-15 78.2
MS.gene026210.t1 AT5G07990 23.868 243 149 8 250 468 233 463 2.30e-14 75.9
MS.gene026210.t1 AT5G24910 21.918 438 288 12 96 502 118 532 3.05e-14 75.5
MS.gene026210.t1 AT4G12320 23.137 255 174 7 242 479 236 485 3.31e-14 75.5
MS.gene026210.t1 AT5G25180 21.198 434 269 13 87 481 68 467 3.51e-14 75.5
MS.gene026210.t1 AT5G05260 22.081 471 293 18 44 468 43 485 5.00e-14 75.1
MS.gene026210.t1 AT5G25120 21.158 501 309 18 21 478 7 464 9.29e-14 73.9
MS.gene026210.t1 AT3G48290 21.029 447 253 13 87 471 72 480 9.37e-14 73.9
MS.gene026210.t1 AT4G37370 23.098 368 221 14 130 468 117 451 1.65e-13 73.2
MS.gene026210.t1 AT5G25140 21.749 423 262 14 93 478 74 464 1.90e-13 73.2
MS.gene026210.t1 AT4G12310 23.413 252 171 6 245 479 241 487 1.92e-13 73.2
MS.gene026210.t1 AT5G24950 31.250 144 97 2 329 472 320 461 2.13e-13 72.8
MS.gene026210.t1 AT2G45550 30.159 126 86 2 350 475 352 475 2.91e-13 72.4
MS.gene026210.t1 AT2G12190 23.759 282 184 8 245 497 225 504 6.67e-13 71.2
MS.gene026210.t1 AT1G64900 30.719 153 100 4 356 503 354 505 7.92e-13 71.2
MS.gene026210.t1 AT1G01190 24.335 263 175 7 247 502 286 531 8.64e-13 71.2
MS.gene026210.t1 AT1G01190 24.335 263 175 7 247 502 291 536 8.87e-13 71.2
MS.gene026210.t1 AT4G27710 23.043 447 289 17 79 499 97 514 8.95e-13 70.9
MS.gene026210.t1 AT3G48320 21.583 417 265 13 92 478 76 460 9.17e-13 70.9
MS.gene026210.t1 AT4G39950 25.911 247 157 8 250 478 267 505 1.20e-12 70.5
MS.gene026210.t1 AT2G45560 31.452 124 83 2 352 475 354 475 1.24e-12 70.5
MS.gene026210.t1 AT4G39950 25.911 247 157 8 250 478 307 545 1.27e-12 70.9
MS.gene026210.t1 AT5G24900 26.163 172 117 4 333 499 241 407 1.41e-12 70.1
MS.gene026210.t1 AT3G25180 26.582 158 113 3 324 481 329 483 1.46e-12 70.5
MS.gene026210.t1 AT2G27000 22.472 356 236 14 173 503 167 507 1.66e-12 70.1
MS.gene026210.t1 AT1G11610 20.863 417 270 13 87 471 72 460 1.97e-12 69.7
MS.gene026210.t1 AT1G79370 22.343 461 284 15 47 456 46 483 1.98e-12 70.1
MS.gene026210.t1 AT5G24900 20.737 434 291 14 96 499 114 524 2.13e-12 69.7
MS.gene026210.t1 AT2G22330 28.636 220 129 9 250 450 292 502 2.27e-12 69.7
MS.gene026210.t1 AT2G46660 27.389 157 107 4 352 502 373 528 2.29e-12 69.7
MS.gene026210.t1 AT1G11610 20.863 417 270 13 87 471 72 460 2.48e-12 69.7
MS.gene026210.t1 AT2G22330 28.636 220 129 9 250 450 269 479 2.75e-12 69.7
MS.gene026210.t1 AT1G33720 27.329 161 104 3 315 475 221 368 2.83e-12 68.9
MS.gene026210.t1 AT1G13080 24.934 377 226 15 128 471 113 465 4.15e-12 68.9
MS.gene026210.t1 AT4G22690 23.843 281 190 9 245 508 282 555 4.21e-12 68.9
MS.gene026210.t1 AT4G31950 24.528 265 167 10 250 488 236 493 4.23e-12 68.9
MS.gene026210.t1 AT3G26830 22.000 350 217 10 135 452 117 442 4.33e-12 68.9
MS.gene026210.t1 AT5G06900 26.538 260 145 10 241 475 227 465 4.58e-12 68.6
MS.gene026210.t1 AT3G20100 28.261 230 130 8 243 457 252 461 4.93e-12 68.6
MS.gene026210.t1 AT5G44620 23.048 269 182 9 245 495 243 504 6.61e-12 68.2
MS.gene026210.t1 AT4G22710 23.843 281 190 9 245 508 251 524 6.87e-12 68.2
MS.gene026210.t1 AT4G13770 29.839 124 86 1 352 475 345 467 8.91e-12 67.8
MS.gene026210.t1 AT2G25160 24.675 385 223 16 121 458 106 470 1.23e-11 67.4
MS.gene026210.t1 AT5G04330 24.895 237 158 7 250 468 231 465 1.85e-11 67.0
MS.gene026210.t1 AT1G12740 25.940 266 174 8 242 504 227 472 1.87e-11 66.6
MS.gene026210.t1 AT1G12740 25.940 266 174 8 242 504 233 478 2.00e-11 66.6
MS.gene026210.t1 AT5G57260 22.252 373 255 10 128 478 112 471 3.11e-11 66.2
MS.gene026210.t1 AT3G28740 21.467 368 227 13 130 468 126 460 3.59e-11 65.9
MS.gene026210.t1 AT2G23190 24.390 246 149 7 237 468 274 496 4.05e-11 65.9
MS.gene026210.t1 AT4G36220 30.579 121 82 2 348 468 358 476 6.77e-11 65.1

Find 86 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTAGTTAACCATCTTTC+TGG 0.171882 1.2:-23336097 None:intergenic
CAATAATGATTTCTATGATT+TGG 0.221252 1.2:-23334102 None:intergenic
ATTGAAAGCAGTGAATTTAT+AGG 0.231991 1.2:-23336143 None:intergenic
GCTCTTGCAAAAGGTATTTC+AGG 0.272239 1.2:-23334688 None:intergenic
TGTTTGAGCTTGTGAATAAT+AGG 0.273388 1.2:+23334530 MS.gene026210:CDS
AATTTGCTGATAGTGTTATA+AGG 0.296272 1.2:+23334836 MS.gene026210:CDS
AATATCTTTGGAACATGATA+TGG 0.302317 1.2:+23334873 MS.gene026210:CDS
AAAGAAAGCTTAGGAACAAT+AGG 0.317508 1.2:-23336271 None:intergenic
CTAACCAATTGGCCTGTCTT+TGG 0.325235 1.2:+23334178 MS.gene026210:CDS
GATACACTTAAGCTTCAAAA+TGG 0.326228 1.2:+23334256 MS.gene026210:CDS
TCTTTGAAGAAGTTTCCTTT+AGG 0.328907 1.2:-23334382 None:intergenic
AGTTTCATTCAACAAAGTTT+AGG 0.332565 1.2:+23334488 MS.gene026210:CDS
GGTTAGGCCATGATGTTTCT+TGG 0.338321 1.2:-23334161 None:intergenic
TATAAATTCACTGCTTTCAA+TGG 0.342401 1.2:+23336145 MS.gene026210:CDS
CTTTGAAGAAGTTTCCTTTA+GGG 0.351456 1.2:-23334381 None:intergenic
CATATTTCGTTACCATGTTA+AGG 0.358133 1.2:+23336234 MS.gene026210:CDS
ATTATATCCTTCTGTTCCTA+TGG 0.369772 1.2:+23335224 MS.gene026210:CDS
AGATTCATCTTTGAAGAAAT+CGG 0.383921 1.2:+23334567 MS.gene026210:CDS
TGGGAAGAATGGAAAACATA+TGG 0.389219 1.2:+23336050 MS.gene026210:CDS
AAGAAAGAAGGAAATATCTT+TGG 0.391937 1.2:+23334861 MS.gene026210:CDS
GATATATGCAATATATTCAA+TGG 0.392509 1.2:+23336030 MS.gene026210:CDS
TTGTTGCGCCGGTTTGTGTA+TGG 0.412310 1.2:+23334746 MS.gene026210:CDS
GACACAGTTTCTGATTTACT+TGG 0.417057 1.2:+23334403 MS.gene026210:CDS
ATGCTACCTTCCTTAATCAT+AGG 0.418783 1.2:+23334202 MS.gene026210:CDS
AATGGAACCTTTAGATTCAA+AGG 0.428940 1.2:+23334274 MS.gene026210:CDS
CAAAGACAGGCCAATTGGTT+AGG 0.430962 1.2:-23334177 None:intergenic
ATTTGTTAACTGTGTTTATG+AGG 0.434752 1.2:+23334917 MS.gene026210:CDS
GAGGTTTCTTAACTTAGGTA+TGG 0.436495 1.2:+23334777 MS.gene026210:CDS
CAATGATTGTTTGAGATTCA+AGG 0.439899 1.2:+23335146 MS.gene026210:CDS
CATTCCAAAGACAGGCCAAT+TGG 0.440500 1.2:-23334182 None:intergenic
ATTTGCTGATAGTGTTATAA+GGG 0.444302 1.2:+23334837 MS.gene026210:CDS
CCATGGCCCTTTGAATCTAA+AGG 0.451528 1.2:-23334281 None:intergenic
AACATCATGGCCTAACCAAT+TGG 0.451675 1.2:+23334167 MS.gene026210:CDS
GGATGATGATAAGCGAAAAT+CGG 0.466867 1.2:+23334894 MS.gene026210:CDS
AATATATTCAATGGGAAGAA+TGG 0.472062 1.2:+23336039 MS.gene026210:CDS
ACTATGAGGTTTCTTAACTT+AGG 0.474628 1.2:+23334772 MS.gene026210:CDS
ATGAGGCTTAAAGATGAGAA+TGG 0.481356 1.2:+23334934 MS.gene026210:CDS
GGCTGAGGAGATTAAGAAGA+TGG 0.481366 1.2:+23335167 MS.gene026210:CDS
ATTACCTCTTTATGATCCAT+AGG 0.481913 1.2:-23335240 None:intergenic
GAAAGATGGTTAACTAAAGA+TGG 0.486051 1.2:+23336100 MS.gene026210:CDS
TGTTATAAGGGCAAGAAAGA+AGG 0.486158 1.2:+23334849 MS.gene026210:CDS
GGGAAGAATGGAAAACATAT+GGG 0.488104 1.2:+23336051 MS.gene026210:CDS
TAAAGTGTCAAAGAAAGCTT+AGG 0.491827 1.2:-23336280 None:intergenic
TCTTCAAAAGCTCTTGCAAA+AGG 0.493073 1.2:-23334697 None:intergenic
AGGTATGGAGAGAAAGTTGA+AGG 0.495061 1.2:+23334792 MS.gene026210:CDS
CAAAATATCTTGAAGATCGA+TGG 0.496051 1.2:-23334593 None:intergenic
TTCAAAGATGAATCTAAGAC+AGG 0.498427 1.2:-23334559 None:intergenic
ATGGAACCTTTAGATTCAAA+GGG 0.498830 1.2:+23334275 MS.gene026210:CDS
ATAGTCTTCCATACACAAAC+CGG 0.517856 1.2:-23334754 None:intergenic
GGAGGACCGAGGTTGTGTTT+AGG 0.518415 1.2:+23336166 MS.gene026210:CDS
ACTAAAGATGGTCATTTCAT+CGG 0.523408 1.2:+23336112 MS.gene026210:CDS
TAGAGTTCAAGCCAGAAAGA+TGG 0.532275 1.2:+23336086 MS.gene026210:CDS
CTCAAAACCAACATGTATGA+AGG 0.534949 1.2:+23334226 MS.gene026210:CDS
CCTTTAGATTCAAAGGGCCA+TGG 0.535114 1.2:+23334281 MS.gene026210:CDS
GGTTATGCCTTCATACATGT+TGG 0.535174 1.2:-23334233 None:intergenic
ATATATGCAATATATTCAAT+GGG 0.541051 1.2:+23336031 MS.gene026210:CDS
TTGTTTGAGATTCAAGGCTG+AGG 0.543717 1.2:+23335152 MS.gene026210:CDS
AAGAAAGCTTAGGAACAATA+GGG 0.544624 1.2:-23336270 None:intergenic
TTTGCTTCGATTTGTTGCGC+CGG 0.551928 1.2:+23334735 MS.gene026210:CDS
TGTTCCTATGGATCATAAAG+AGG 0.552892 1.2:+23335236 MS.gene026210:CDS
ATGATGTTTCTTGGAGTGCA+AGG 0.557000 1.2:-23334152 None:intergenic
TTGACACTTTACATGAAACA+TGG 0.567667 1.2:+23336292 MS.gene026210:CDS
AAATTCACTGCTTTCAATGG+AGG 0.571369 1.2:+23336148 MS.gene026210:CDS
TGATCAGAATCATGAAGTTG+AGG 0.573405 1.2:+23335059 MS.gene026210:intron
GTTTCTGATTTACTTGGAGA+CGG 0.575619 1.2:+23334409 MS.gene026210:CDS
AATATTACAAGAGATTTGCA+TGG 0.575767 1.2:+23335086 MS.gene026210:CDS
GAAGGTAGCATTCCAAAGAC+AGG 0.578261 1.2:-23334190 None:intergenic
TTGCACTCCAAGAAACATCA+TGG 0.579240 1.2:+23334154 MS.gene026210:CDS
TTGAGTCCTATGATTAAGGA+AGG 0.580121 1.2:-23334208 None:intergenic
TTATGATCCATAGGAACAGA+AGG 0.580766 1.2:-23335231 None:intergenic
GATTGAAAGTTAATCTTCGT+AGG 0.584049 1.2:+23336314 MS.gene026210:CDS
TTTGCATGGTTGTGAGTCAG+AGG 0.586700 1.2:+23335100 MS.gene026210:CDS
TTTGTGTATGGAAGACTATG+AGG 0.587083 1.2:+23334758 MS.gene026210:CDS
ACGAAACATGGCAGAAACAA+AGG 0.603675 1.2:+23334449 MS.gene026210:CDS
TTGCATGGTTGTGAGTCAGA+GGG 0.626640 1.2:+23335101 MS.gene026210:CDS
CTGCTTTCAATGGAGGACCG+AGG 0.630541 1.2:+23336155 MS.gene026210:CDS
GGAAGAATGGAAAACATATG+GGG 0.633456 1.2:+23336052 MS.gene026210:CDS
TCGCTGTAGATAACGAAACA+TGG 0.643347 1.2:+23334437 MS.gene026210:CDS
CATGGTTGTGAGTCAGAGGG+AGG 0.646695 1.2:+23335104 MS.gene026210:CDS
GAAGATGACACATTCCCAGA+TGG 0.647740 1.2:+23335980 MS.gene026210:CDS
AAATGAAGTTGCAAACAACA+AGG 0.647984 1.2:-23334664 None:intergenic
GATTCTCAACAACCTTAACA+TGG 0.663167 1.2:-23336246 None:intergenic
TCAGAGGGAGGATATTAACA+AGG 0.665329 1.2:+23335116 MS.gene026210:CDS
ATGAATGATTATGAAGACAA+TGG 0.666821 1.2:-23334128 None:intergenic
CAATTGAAACTAGTGAACCA+TGG 0.673397 1.2:-23334298 None:intergenic
TCTTTGCCTAAACACAACCT+CGG 0.675873 1.2:-23336172 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATGCAATATATTCAAT+GGG + chr1.2:23336031-23336050 MS.gene026210:CDS 15.0%
!!! GAATTTTATTTTTTTTCATC+AGG + chr1.2:23335952-23335971 MS.gene026210:intron 15.0%
!!! TCTTTTCTAACAATATTATT+AGG - chr1.2:23335788-23335807 None:intergenic 15.0%
!! AAAACTATTCACAAAATTCA+AGG + chr1.2:23335718-23335737 MS.gene026210:intron 20.0%
!! CAATAATGATTTCTATGATT+TGG - chr1.2:23334105-23334124 None:intergenic 20.0%
!! GATATATGCAATATATTCAA+TGG + chr1.2:23336030-23336049 MS.gene026210:CDS 20.0%
!!! ATTATTCAGATAAGTTTTTG+AGG + chr1.2:23334962-23334981 MS.gene026210:CDS 20.0%
!!! TTATTCAGATAAGTTTTTGA+GGG + chr1.2:23334963-23334982 MS.gene026210:CDS 20.0%
!!! TTATTGATTGAAGTTCATAT+TGG + chr1.2:23335930-23335949 MS.gene026210:intron 20.0%
!!! TTTTATTTTTTTTCATCAGG+TGG + chr1.2:23335955-23335974 MS.gene026210:intron 20.0%
! AAGAAAGAAGGAAATATCTT+TGG + chr1.2:23334861-23334880 MS.gene026210:CDS 25.0%
! AATATATTCAATGGGAAGAA+TGG + chr1.2:23336039-23336058 MS.gene026210:CDS 25.0%
! AATATTACAAGAGATTTGCA+TGG + chr1.2:23335086-23335105 MS.gene026210:CDS 25.0%
! AGTTTCATTCAACAAAGTTT+AGG + chr1.2:23334488-23334507 MS.gene026210:CDS 25.0%
! ATGAATGATTATGAAGACAA+TGG - chr1.2:23334131-23334150 None:intergenic 25.0%
! ATTGAAAGCAGTGAATTTAT+AGG - chr1.2:23336146-23336165 None:intergenic 25.0%
! GATGGAACAAAACTAAAAAA+AGG + chr1.2:23335998-23336017 MS.gene026210:CDS 25.0%
! TATAAATTCACTGCTTTCAA+TGG + chr1.2:23336145-23336164 MS.gene026210:CDS 25.0%
! TCTGAATAAAATGATCTCTT+TGG + chr1.2:23335659-23335678 MS.gene026210:intron 25.0%
! TTACAATCATGAAAGATATG+AGG - chr1.2:23335297-23335316 None:intergenic 25.0%
!! AGATTCATCTTTGAAGAAAT+CGG + chr1.2:23334567-23334586 MS.gene026210:CDS 25.0%
!! ATTTGCTGATAGTGTTATAA+GGG + chr1.2:23334837-23334856 MS.gene026210:CDS 25.0%
!! ATTTGTTAACTGTGTTTATG+AGG + chr1.2:23334917-23334936 MS.gene026210:CDS 25.0%
!! TTTTAGTCCATATATATGAG+AGG - chr1.2:23335554-23335573 None:intergenic 25.0%
!!! AATATCTTTGGAACATGATA+TGG + chr1.2:23334873-23334892 MS.gene026210:CDS 25.0%
!!! AATTTGCTGATAGTGTTATA+AGG + chr1.2:23334836-23334855 MS.gene026210:CDS 25.0%
!!! AGAAGATGTTCTAAATTTTG+AGG - chr1.2:23334340-23334359 None:intergenic 25.0%
!!! ATTTTGAAGCTTAAGTGTAT+CGG - chr1.2:23334257-23334276 None:intergenic 25.0%
!!! GTGTAAGTTTTATATTAGCT+GGG + chr1.2:23334992-23335011 MS.gene026210:intron 25.0%
!!! TGTGTAAGTTTTATATTAGC+TGG + chr1.2:23334991-23335010 MS.gene026210:intron 25.0%
!!! TTTTGGTTTTTAAATGTGTG+AGG + chr1.2:23335351-23335370 MS.gene026210:intron 25.0%
!!! TTTTTAGTTTTGTTCCATCT+GGG - chr1.2:23335997-23336016 None:intergenic 25.0%
!!! TTTTTTAGTTTTGTTCCATC+TGG - chr1.2:23335998-23336017 None:intergenic 25.0%
AAAGAAAGCTTAGGAACAAT+AGG - chr1.2:23336274-23336293 None:intergenic 30.0%
AAATGAAGTTGCAAACAACA+AGG - chr1.2:23334667-23334686 None:intergenic 30.0%
AACAACACCTCTCATATATA+TGG + chr1.2:23335544-23335563 MS.gene026210:intron 30.0%
AAGAAAGCTTAGGAACAATA+GGG - chr1.2:23336273-23336292 None:intergenic 30.0%
AATGGAACCTTTAGATTCAA+AGG + chr1.2:23334274-23334293 MS.gene026210:CDS 30.0%
ACTAAAGATGGTCATTTCAT+CGG + chr1.2:23336112-23336131 MS.gene026210:CDS 30.0%
ACTATGAGGTTTCTTAACTT+AGG + chr1.2:23334772-23334791 MS.gene026210:CDS 30.0%
ATGGAACCTTTAGATTCAAA+GGG + chr1.2:23334275-23334294 MS.gene026210:CDS 30.0%
ATTACCTCTTTATGATCCAT+AGG - chr1.2:23335243-23335262 None:intergenic 30.0%
ATTATATCCTTCTGTTCCTA+TGG + chr1.2:23335224-23335243 MS.gene026210:CDS 30.0%
CAAAATATCTTGAAGATCGA+TGG - chr1.2:23334596-23334615 None:intergenic 30.0%
CATATTTCGTTACCATGTTA+AGG + chr1.2:23336234-23336253 MS.gene026210:CDS 30.0%
GAAAGATGGTTAACTAAAGA+TGG + chr1.2:23336100-23336119 MS.gene026210:CDS 30.0%
GATACACTTAAGCTTCAAAA+TGG + chr1.2:23334256-23334275 MS.gene026210:CDS 30.0%
GATTGAAAGTTAATCTTCGT+AGG + chr1.2:23336314-23336333 MS.gene026210:CDS 30.0%
GGAATAAACTCTCTTATAGT+AGG + chr1.2:23335680-23335699 MS.gene026210:intron 30.0%
TAACTAACACAAGACATTGT+TGG - chr1.2:23335466-23335485 None:intergenic 30.0%
TCAATTTGATTCTCGAATGT+TGG + chr1.2:23335430-23335449 MS.gene026210:intron 30.0%
TCTTTAGTTAACCATCTTTC+TGG - chr1.2:23336100-23336119 None:intergenic 30.0%
TGTTTGAGCTTGTGAATAAT+AGG + chr1.2:23334530-23334549 MS.gene026210:CDS 30.0%
TTGACACTTTACATGAAACA+TGG + chr1.2:23336292-23336311 MS.gene026210:CDS 30.0%
! AAGTTCACTATTTTCCCTAA+AGG + chr1.2:23334367-23334386 MS.gene026210:CDS 30.0%
! CAATGATTGTTTGAGATTCA+AGG + chr1.2:23335146-23335165 MS.gene026210:CDS 30.0%
! CTTTGAAGAAGTTTCCTTTA+GGG - chr1.2:23334384-23334403 None:intergenic 30.0%
! GTGAGAAAACAAGTTTTCTA+TGG - chr1.2:23334059-23334078 None:intergenic 30.0%
! TAAAGTGTCAAAGAAAGCTT+AGG - chr1.2:23336283-23336302 None:intergenic 30.0%
! TCTTTGAAGAAGTTTCCTTT+AGG - chr1.2:23334385-23334404 None:intergenic 30.0%
! TTCAAAGATGAATCTAAGAC+AGG - chr1.2:23334562-23334581 None:intergenic 30.0%
!! TGTCTTGTGTTAGTTACTTT+TGG + chr1.2:23335470-23335489 MS.gene026210:intron 30.0%
!!! TATTTTTTTTCATCAGGTGG+TGG + chr1.2:23335958-23335977 MS.gene026210:intron 30.0%
!!! TTCTAAATTTTGAGGTTCTG+AGG - chr1.2:23334332-23334351 None:intergenic 30.0%
AAATTCACTGCTTTCAATGG+AGG + chr1.2:23336148-23336167 MS.gene026210:CDS 35.0%
AATTCGCCCCTAAAATTGTA+GGG - chr1.2:23335759-23335778 None:intergenic 35.0%
ATAGTCTTCCATACACAAAC+CGG - chr1.2:23334757-23334776 None:intergenic 35.0%
ATGAGGCTTAAAGATGAGAA+TGG + chr1.2:23334934-23334953 MS.gene026210:CDS 35.0%
ATGCTACCTTCCTTAATCAT+AGG + chr1.2:23334202-23334221 MS.gene026210:CDS 35.0%
CAATTGAAACTAGTGAACCA+TGG - chr1.2:23334301-23334320 None:intergenic 35.0%
CTCAAAACCAACATGTATGA+AGG + chr1.2:23334226-23334245 MS.gene026210:CDS 35.0%
GACACAGTTTCTGATTTACT+TGG + chr1.2:23334403-23334422 MS.gene026210:CDS 35.0%
GAGGTTTCTTAACTTAGGTA+TGG + chr1.2:23334777-23334796 MS.gene026210:CDS 35.0%
GATTCTCAACAACCTTAACA+TGG - chr1.2:23336249-23336268 None:intergenic 35.0%
GGAAGAATGGAAAACATATG+GGG + chr1.2:23336052-23336071 MS.gene026210:CDS 35.0%
GGATGATGATAAGCGAAAAT+CGG + chr1.2:23334894-23334913 MS.gene026210:CDS 35.0%
GGGAAGAATGGAAAACATAT+GGG + chr1.2:23336051-23336070 MS.gene026210:CDS 35.0%
GTTTCTGATTTACTTGGAGA+CGG + chr1.2:23334409-23334428 MS.gene026210:CDS 35.0%
TCGATTAATGTGCTTCAAGT+GGG + chr1.2:23335585-23335604 MS.gene026210:intron 35.0%
TCTTCAAAAGCTCTTGCAAA+AGG - chr1.2:23334700-23334719 None:intergenic 35.0%
TGATCAGAATCATGAAGTTG+AGG + chr1.2:23335059-23335078 MS.gene026210:intron 35.0%
TGGGAAGAATGGAAAACATA+TGG + chr1.2:23336050-23336069 MS.gene026210:CDS 35.0%
TGTTATAAGGGCAAGAAAGA+AGG + chr1.2:23334849-23334868 MS.gene026210:CDS 35.0%
TGTTCCTATGGATCATAAAG+AGG + chr1.2:23335236-23335255 MS.gene026210:CDS 35.0%
TTATGATCCATAGGAACAGA+AGG - chr1.2:23335234-23335253 None:intergenic 35.0%
TTGAGTCCTATGATTAAGGA+AGG - chr1.2:23334211-23334230 None:intergenic 35.0%
TTTGTGTATGGAAGACTATG+AGG + chr1.2:23334758-23334777 MS.gene026210:CDS 35.0%
!! ACTTTTGGTGATACACTTGA+AGG + chr1.2:23335485-23335504 MS.gene026210:intron 35.0%
!! TTCTCGAATGTTGGTTTGTT+TGG + chr1.2:23335439-23335458 MS.gene026210:intron 35.0%
!!! GGTTTTGAGTCCTATGATTA+AGG - chr1.2:23334215-23334234 None:intergenic 35.0%
!!! TTGCTTTGAGCTGGTTTTTT+TGG + chr1.2:23335031-23335050 MS.gene026210:intron 35.0%
!!! TTTGAGCTGGTTTTTTTGGT+TGG + chr1.2:23335035-23335054 MS.gene026210:intron 35.0%
AACATCATGGCCTAACCAAT+TGG + chr1.2:23334167-23334186 MS.gene026210:CDS 40.0%
ACGAAACATGGCAGAAACAA+AGG + chr1.2:23334449-23334468 MS.gene026210:CDS 40.0%
AGGTATGGAGAGAAAGTTGA+AGG + chr1.2:23334792-23334811 MS.gene026210:CDS 40.0%
ATGATGTTTCTTGGAGTGCA+AGG - chr1.2:23334155-23334174 None:intergenic 40.0%
ATTCGCCCCTAAAATTGTAG+GGG - chr1.2:23335758-23335777 None:intergenic 40.0%
CAATTCGCCCCTAAAATTGT+AGG - chr1.2:23335760-23335779 None:intergenic 40.0%
CTCGATTAATGTGCTTCAAG+TGG + chr1.2:23335584-23335603 MS.gene026210:intron 40.0%
GGTTATGCCTTCATACATGT+TGG - chr1.2:23334236-23334255 None:intergenic 40.0%
TAGAGTTCAAGCCAGAAAGA+TGG + chr1.2:23336086-23336105 MS.gene026210:CDS 40.0%
TCAGAGGGAGGATATTAACA+AGG + chr1.2:23335116-23335135 MS.gene026210:CDS 40.0%
TCGCTGTAGATAACGAAACA+TGG + chr1.2:23334437-23334456 MS.gene026210:CDS 40.0%
TCTTTGCCTAAACACAACCT+CGG - chr1.2:23336175-23336194 None:intergenic 40.0%
TTGCACTCCAAGAAACATCA+TGG + chr1.2:23334154-23334173 MS.gene026210:CDS 40.0%
! ATGCCAACCCCTACAATTTT+AGG + chr1.2:23335748-23335767 MS.gene026210:intron 40.0%
! GATGCACGATAGAGTCATTT+TGG + chr1.2:23335334-23335353 MS.gene026210:intron 40.0%
! TGCCAACCCCTACAATTTTA+GGG + chr1.2:23335749-23335768 MS.gene026210:intron 40.0%
! TTGTTTGAGATTCAAGGCTG+AGG + chr1.2:23335152-23335171 MS.gene026210:CDS 40.0%
!! CTACAATTTTAGGGGCGAAT+TGG + chr1.2:23335758-23335777 MS.gene026210:intron 40.0%
!! GCTCTTGCAAAAGGTATTTC+AGG - chr1.2:23334691-23334710 None:intergenic 40.0%
CAAAGACAGGCCAATTGGTT+AGG - chr1.2:23334180-23334199 None:intergenic 45.0%
CATTCCAAAGACAGGCCAAT+TGG - chr1.2:23334185-23334204 None:intergenic 45.0%
CCATGGCCCTTTGAATCTAA+AGG - chr1.2:23334284-23334303 None:intergenic 45.0%
CCTTTAGATTCAAAGGGCCA+TGG + chr1.2:23334281-23334300 MS.gene026210:CDS 45.0%
GAAGATGACACATTCCCAGA+TGG + chr1.2:23335980-23335999 MS.gene026210:CDS 45.0%
GAAGGTAGCATTCCAAAGAC+AGG - chr1.2:23334193-23334212 None:intergenic 45.0%
GGCTGAGGAGATTAAGAAGA+TGG + chr1.2:23335167-23335186 MS.gene026210:CDS 45.0%
GGTTAGGCCATGATGTTTCT+TGG - chr1.2:23334164-23334183 None:intergenic 45.0%
TTGCATGGTTGTGAGTCAGA+GGG + chr1.2:23335101-23335120 MS.gene026210:CDS 45.0%
TTTGCATGGTTGTGAGTCAG+AGG + chr1.2:23335100-23335119 MS.gene026210:CDS 45.0%
! CTAACCAATTGGCCTGTCTT+TGG + chr1.2:23334178-23334197 MS.gene026210:CDS 45.0%
! CTTCTTCAGTTGCTTTGAGC+TGG + chr1.2:23335022-23335041 MS.gene026210:intron 45.0%
! GCCAACCCCTACAATTTTAG+GGG + chr1.2:23335750-23335769 MS.gene026210:intron 45.0%
!! TTTGCTTCGATTTGTTGCGC+CGG + chr1.2:23334735-23334754 MS.gene026210:CDS 45.0%
GCCCCTAAAATTGTAGGGGT+TGG - chr1.2:23335754-23335773 None:intergenic 50.0%
!! TTGTTGCGCCGGTTTGTGTA+TGG + chr1.2:23334746-23334765 MS.gene026210:CDS 50.0%
CATGGTTGTGAGTCAGAGGG+AGG + chr1.2:23335104-23335123 MS.gene026210:CDS 55.0%
CTGCTTTCAATGGAGGACCG+AGG + chr1.2:23336155-23336174 MS.gene026210:CDS 55.0%
GGAGGACCGAGGTTGTGTTT+AGG + chr1.2:23336166-23336185 MS.gene026210:CDS 55.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 23334046 23336372 23334046 ID=MS.gene026210
chr1.2 mRNA 23334046 23336372 23334046 ID=MS.gene026210.t1;Parent=MS.gene026210
chr1.2 exon 23334046 23334993 23334046 ID=MS.gene026210.t1.exon1;Parent=MS.gene026210.t1
chr1.2 CDS 23334046 23334993 23334046 ID=cds.MS.gene026210.t1;Parent=MS.gene026210.t1
chr1.2 exon 23335066 23335257 23335066 ID=MS.gene026210.t1.exon2;Parent=MS.gene026210.t1
chr1.2 CDS 23335066 23335257 23335066 ID=cds.MS.gene026210.t1;Parent=MS.gene026210.t1
chr1.2 exon 23335974 23336372 23335974 ID=MS.gene026210.t1.exon3;Parent=MS.gene026210.t1
chr1.2 CDS 23335974 23336372 23335974 ID=cds.MS.gene026210.t1;Parent=MS.gene026210.t1
Gene Sequence

>MS.gene026210

ATGGTTGCAGCCATAGAAAACTTGTTTTCTCACATTCTTTTGCTCTTTCAACAAATCCAAATCATAGAAATCATTATTGCATCCATTGTCTTCATAATCATTCATGCCTTGCACTCCAAGAAACATCATGGCCTAACCAATTGGCCTGTCTTTGGAATGCTACCTTCCTTAATCATAGGACTCAAAACCAACATGTATGAAGGCATAACCGATACACTTAAGCTTCAAAATGGAACCTTTAGATTCAAAGGGCCATGGTTCACTAGTTTCAATTGCATCATAACCTCAGAACCTCAAAATTTAGAACATCTTCTCAAAACAAAGTTCACTATTTTCCCTAAAGGAAACTTCTTCAAAGACACAGTTTCTGATTTACTTGGAGACGGTATTTTCGCTGTAGATAACGAAACATGGCAGAAACAAAGGAAAACAGCGAGTATCGAGTTTCATTCAACAAAGTTTAGGAAATTAACAACTGATTCATTGTTTGAGCTTGTGAATAATAGGCTTATACCTGTCTTAGATTCATCTTTGAAGAAATCGGTTTCCATCGATCTTCAAGATATTTTGTTGAGACTAACTTTTGATAATGTTTGTATGATAGCTTTTGATGTTGATCCTTGTTGTTTGCAACTTCATTTACCTGAAATACCTTTTGCAAGAGCTTTTGAAGATGCAACAGAAGCAACTTTGCTTCGATTTGTTGCGCCGGTTTGTGTATGGAAGACTATGAGGTTTCTTAACTTAGGTATGGAGAGAAAGTTGAAGGAATCAATACAAAAAGTTGATGAATTTGCTGATAGTGTTATAAGGGCAAGAAAGAAGGAAATATCTTTGGAACATGATATGGATGATGATAAGCGAAAATCGGATTTGTTAACTGTGTTTATGAGGCTTAAAGATGAGAATGGAAAGCATTATTCAGATAAGTTTTTGAGGGATATATGTGTAAGTTTTATATTAGCTGGGAGAGACACTTCTTCAGTTGCTTTGAGCTGGTTTTTTTGGTTGGTTGATCAGAATCATGAAGTTGAGGAGAAAATATTACAAGAGATTTGCATGGTTGTGAGTCAGAGGGAGGATATTAACAAGGAAGTGTTCAATGATTGTTTGAGATTCAAGGCTGAGGAGATTAAGAAGATGGATTATTTGCATGCAGCTCTTTCAGAAACTCTTAGATTATATCCTTCTGTTCCTATGGATCATAAAGAGGTAATAAAAGTTTAATTTTATTTATTCATTGATATTCCTCATATCTTTCATGATTGTAATTTGTGTGTAAACGATTGATGCACGATAGAGTCATTTTGGTTTTTAAATGTGTGAGGTGCTGTTAGAATAGTATCAAAATTACGAAAACATATCTAAATGCAACTATTGTTAATCAATTTGATTCTCGAATGTTGGTTTGTTTGGTCCAACAATGTCTTGTGTTAGTTACTTTTGGTGATACACTTGAAGGTGTTTTTGTAATGTCAATAGATTTAAAGATTGTAGTAACAACACCTCTCATATATATGGACTAAAATGACTGTTTACTCGATTAATGTGCTTCAAGTGGGATTTTTTTTTTTTTTTTAGAATTCAAGTTTAATCAATGATTGAAACAATCTTCTGAATAAAATGATCTCTTTGGAATAAACTCTCTTATAGTAGGAGTTATATATAAAAAAAAACTATTCACAAAATTCAAGGAAGTAAAATGCCAACCCCTACAATTTTAGGGGCGAATTGGTCAACCTAATAATATTGTTAGAAAAGAGTAATTAATATTTTGTAAGTATTCTTAAATTAAAAATAAAAAATATTTCACACATGACAATATTTCACACATGACAATATATATGCTCAGATAGATGAAATAATAGAAATCAACTATATCTATTATTGATTGAAGTTCATATTGGAATTTTATTTTTTTTCATCAGGTGGTGGAAGATGACACATTCCCAGATGGAACAAAACTAAAAAAAGGAACAAAAGTGATATATGCAATATATTCAATGGGAAGAATGGAAAACATATGGGGAAAAGATTGCTTAGAGTTCAAGCCAGAAAGATGGTTAACTAAAGATGGTCATTTCATCGGCGAATCTGCCTATAAATTCACTGCTTTCAATGGAGGACCGAGGTTGTGTTTAGGCAAAGATTTTGCATACTATCAAATGAAATATGTTGCAGCTAGCATCATATTTCGTTACCATGTTAAGGTTGTTGAGAATCACCCTATTGTTCCTAAGCTTTCTTTGACACTTTACATGAAACATGGATTGAAAGTTAATCTTCGTAGGCGTTGTGATGAAGAAATTCATATACTTGAAGATTAG
Protein sequence

>MS.gene026210.t1

MVAAIENLFSHILLLFQQIQIIEIIIASIVFIIIHALHSKKHHGLTNWPVFGMLPSLIIGLKTNMYEGITDTLKLQNGTFRFKGPWFTSFNCIITSEPQNLEHLLKTKFTIFPKGNFFKDTVSDLLGDGIFAVDNETWQKQRKTASIEFHSTKFRKLTTDSLFELVNNRLIPVLDSSLKKSVSIDLQDILLRLTFDNVCMIAFDVDPCCLQLHLPEIPFARAFEDATEATLLRFVAPVCVWKTMRFLNLGMERKLKESIQKVDEFADSVIRARKKEISLEHDMDDDKRKSDLLTVFMRLKDENGKHYSDKFLRDICNHEVEEKILQEICMVVSQREDINKEVFNDCLRFKAEEIKKMDYLHAALSETLRLYPSVPMDHKEVVEDDTFPDGTKLKKGTKVIYAIYSMGRMENIWGKDCLEFKPERWLTKDGHFIGESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIFRYHVKVVENHPIVPKLSLTLYMKHGLKVNLRRRCDEEIHILED