Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73663.t1 | XP_003630362.1 | 95.3 | 645 | 25 | 2 | 1 | 645 | 1 | 640 | 1.10E-253 | 885.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73663.t1 | Q9MA92 | 48.4 | 415 | 175 | 6 | 1 | 415 | 1 | 376 | 5.4e-84 | 313.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73663.t1 | G7LFP4 | 95.3 | 645 | 25 | 2 | 1 | 645 | 1 | 640 | 7.8e-254 | 885.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene73663 | 0.811929 | 5.48E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene73663 | 0.811602 | 6.45E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene73663 | 0.803943 | 2.74E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene73663 | 0.811767 | 5.94E-51 | -1.69E-46 |
| MS.gene050237 | MS.gene73663 | 0.815338 | 9.73E-52 | -1.69E-46 |
| MS.gene050355 | MS.gene73663 | 0.801083 | 1.06E-48 | -1.69E-46 |
| MS.gene050719 | MS.gene73663 | 0.831923 | 1.27E-55 | -1.69E-46 |
| MS.gene050721 | MS.gene73663 | 0.834182 | 3.47E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene73663 | 0.827773 | 1.30E-54 | -1.69E-46 |
| MS.gene050750 | MS.gene73663 | 0.802304 | 5.98E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene73663 | 0.818013 | 2.45E-52 | -1.69E-46 |
| MS.gene050808 | MS.gene73663 | 0.803774 | 2.97E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene73663 | 0.807612 | 4.64E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene73663 | 0.805667 | 1.20E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene73663 | 0.810414 | 1.17E-50 | -1.69E-46 |
| MS.gene051265 | MS.gene73663 | 0.816484 | 5.40E-52 | -1.69E-46 |
| MS.gene051388 | MS.gene73663 | 0.815453 | 9.17E-52 | -1.69E-46 |
| MS.gene051594 | MS.gene73663 | 0.824852 | 6.45E-54 | -1.69E-46 |
| MS.gene051719 | MS.gene73663 | 0.801864 | 7.36E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene73663 | 0.808487 | 3.02E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene73663 | 0.802118 | 6.53E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene73663 | 0.822492 | 2.30E-53 | -1.69E-46 |
| MS.gene052561 | MS.gene73663 | 0.84043 | 8.74E-58 | -1.69E-46 |
| MS.gene052582 | MS.gene73663 | 0.828363 | 9.37E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene73663 | 0.811096 | 8.30E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene73663 | 0.806437 | 8.23E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene73663 | 0.812991 | 3.21E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene73663 | 0.822743 | 2.01E-53 | -1.69E-46 |
| MS.gene053164 | MS.gene73663 | 0.806017 | 1.01E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene73663 | 0.813466 | 2.52E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene73663 | 0.826638 | 2.43E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene73663 | 0.814013 | 1.91E-51 | -1.69E-46 |
| MS.gene053998 | MS.gene73663 | 0.823156 | 1.61E-53 | -1.69E-46 |
| MS.gene05414 | MS.gene73663 | 0.825676 | 4.12E-54 | -1.69E-46 |
| MS.gene05415 | MS.gene73663 | 0.817241 | 3.65E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene73663 | 0.819068 | 1.41E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene73663 | 0.803082 | 4.13E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene73663 | 0.803705 | 3.07E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene73663 | 0.804153 | 2.48E-49 | -1.69E-46 |
| MS.gene055466 | MS.gene73663 | 0.808853 | 2.53E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene73663 | 0.805944 | 1.05E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene73663 | 0.841533 | 4.48E-58 | -1.69E-46 |
| MS.gene055778 | MS.gene73663 | 0.802539 | 5.35E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene73663 | 0.806084 | 9.77E-50 | -1.69E-46 |
| MS.gene055926 | MS.gene73663 | 0.810823 | 9.52E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene73663 | 0.821755 | 3.41E-53 | -1.69E-46 |
| MS.gene056373 | MS.gene73663 | 0.804274 | 2.34E-49 | -1.69E-46 |
| MS.gene057021 | MS.gene73663 | 0.812126 | 4.96E-51 | -1.69E-46 |
| MS.gene057314 | MS.gene73663 | 0.823792 | 1.14E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene73663 | 0.808795 | 2.60E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene73663 | 0.801765 | 7.71E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene73663 | 0.802472 | 5.52E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene73663 | 0.821218 | 4.54E-53 | -1.69E-46 |
| MS.gene058636 | MS.gene73663 | 0.805065 | 1.60E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene73663 | 0.818015 | 2.44E-52 | -1.69E-46 |
| MS.gene059128 | MS.gene73663 | 0.800962 | 1.13E-48 | -1.69E-46 |
| MS.gene05954 | MS.gene73663 | 0.819269 | 1.27E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene73663 | 0.807651 | 4.56E-50 | -1.69E-46 |
| MS.gene060137 | MS.gene73663 | -0.810069 | 1.38E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene73663 | 0.829263 | 5.68E-55 | -1.69E-46 |
| MS.gene060429 | MS.gene73663 | 0.809608 | 1.74E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene73663 | 0.805661 | 1.20E-49 | -1.69E-46 |
| MS.gene060918 | MS.gene73663 | 0.802978 | 4.34E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene73663 | 0.800244 | 1.58E-48 | -1.69E-46 |
| MS.gene061040 | MS.gene73663 | -0.825985 | 3.48E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73663 | MS.gene002865 | PPI |
| MS.gene73663 | MS.gene00895 | PPI |
| MS.gene73663 | MS.gene01827 | PPI |
| MS.gene73663 | MS.gene99533 | PPI |
| MS.gene73663 | MS.gene01838 | PPI |
| MS.gene01826 | MS.gene73663 | PPI |
| MS.gene73663 | MS.gene01143 | PPI |
| MS.gene002867 | MS.gene73663 | PPI |
| MS.gene73663 | MS.gene84485 | PPI |
| MS.gene73663 | MS.gene002176 | PPI |
| MS.gene73663 | MS.gene026637 | PPI |
| MS.gene73663 | MS.gene026126 | PPI |
| MS.gene73663 | MS.gene002864 | PPI |
| MS.gene73663 | MS.gene00893 | PPI |
| MS.gene73663 | MS.gene047901 | PPI |
| MS.gene73663 | MS.gene75229 | PPI |
| MS.gene73663 | MS.gene63019 | PPI |
| MS.gene01146 | MS.gene73663 | PPI |
| MS.gene73663 | MS.gene047900 | PPI |
| MS.gene73663 | MS.gene00896 | PPI |
| MS.gene73663 | MS.gene071947 | PPI |
| MS.gene73663 | MS.gene002174 | PPI |
| MS.gene33602 | MS.gene73663 | PPI |
| MS.gene73663 | MS.gene047904 | PPI |
| MS.gene73663 | MS.gene047083 | PPI |
| MS.gene071949 | MS.gene73663 | PPI |
| MS.gene73663 | MS.gene93193 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73663.t1 | MTR_8g094760 | 96.124 | 645 | 20 | 2 | 1 | 645 | 1 | 640 | 0.0 | 1240 |
| MS.gene73663.t1 | MTR_8g094760 | 95.895 | 609 | 20 | 2 | 37 | 645 | 25 | 628 | 0.0 | 1165 |
| MS.gene73663.t1 | MTR_3g096990 | 60.737 | 624 | 203 | 6 | 34 | 636 | 27 | 629 | 0.0 | 677 |
| MS.gene73663.t1 | MTR_3g096990 | 61.024 | 508 | 154 | 5 | 34 | 523 | 27 | 508 | 0.0 | 536 |
| MS.gene73663.t1 | MTR_3g096990 | 56.371 | 259 | 106 | 3 | 384 | 636 | 466 | 723 | 1.84e-77 | 261 |
| MS.gene73663.t1 | MTR_1g030010 | 46.053 | 456 | 210 | 4 | 73 | 513 | 145 | 579 | 2.91e-110 | 351 |
| MS.gene73663.t1 | MTR_1g030010 | 35.981 | 214 | 76 | 6 | 467 | 643 | 638 | 827 | 2.82e-20 | 95.9 |
| MS.gene73663.t1 | MTR_3g113290 | 38.750 | 320 | 147 | 6 | 1 | 273 | 1 | 318 | 4.14e-43 | 167 |
| MS.gene73663.t1 | MTR_1g024095 | 37.954 | 303 | 154 | 6 | 1 | 273 | 1 | 299 | 1.61e-39 | 156 |
| MS.gene73663.t1 | MTR_1g024095 | 37.954 | 303 | 154 | 6 | 1 | 273 | 1 | 299 | 1.62e-39 | 156 |
| MS.gene73663.t1 | MTR_5g021810 | 35.410 | 305 | 160 | 6 | 1 | 273 | 1 | 300 | 8.24e-39 | 153 |
| MS.gene73663.t1 | MTR_5g021810 | 35.390 | 308 | 155 | 6 | 1 | 273 | 1 | 299 | 1.83e-38 | 152 |
| MS.gene73663.t1 | MTR_4g094848 | 36.735 | 294 | 118 | 7 | 1 | 265 | 1 | 255 | 1.03e-35 | 144 |
| MS.gene73663.t1 | MTR_5g016830 | 33.247 | 385 | 183 | 12 | 1 | 357 | 1 | 339 | 1.47e-34 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73663.t1 | AT3G05270 | 42.530 | 656 | 260 | 10 | 1 | 580 | 1 | 615 | 1.64e-137 | 416 |
| MS.gene73663.t1 | AT3G05270 | 42.530 | 656 | 260 | 10 | 1 | 580 | 1 | 615 | 1.64e-137 | 416 |
| MS.gene73663.t1 | AT3G05270 | 42.530 | 656 | 260 | 10 | 1 | 580 | 1 | 615 | 1.64e-137 | 416 |
| MS.gene73663.t1 | AT1G21810 | 37.345 | 565 | 253 | 14 | 86 | 584 | 13 | 542 | 4.47e-78 | 261 |
| MS.gene73663.t1 | AT1G21810 | 28.826 | 281 | 136 | 8 | 386 | 640 | 381 | 623 | 5.54e-13 | 72.4 |
| MS.gene73663.t1 | AT1G21810 | 37.345 | 565 | 253 | 14 | 86 | 584 | 13 | 542 | 4.47e-78 | 261 |
| MS.gene73663.t1 | AT1G21810 | 28.826 | 281 | 136 | 8 | 386 | 640 | 381 | 623 | 5.54e-13 | 72.4 |
| MS.gene73663.t1 | AT1G77580 | 47.500 | 320 | 134 | 5 | 72 | 390 | 28 | 314 | 4.49e-75 | 253 |
| MS.gene73663.t1 | AT1G77580 | 47.500 | 320 | 134 | 5 | 72 | 390 | 28 | 314 | 5.52e-74 | 253 |
| MS.gene73663.t1 | AT1G77580 | 32.168 | 286 | 139 | 6 | 380 | 639 | 482 | 738 | 9.88e-20 | 94.4 |
| MS.gene73663.t1 | AT1G77580 | 47.500 | 320 | 134 | 5 | 72 | 390 | 62 | 348 | 8.92e-74 | 253 |
| MS.gene73663.t1 | AT1G77580 | 32.168 | 286 | 139 | 6 | 380 | 639 | 516 | 772 | 9.13e-20 | 94.4 |
| MS.gene73663.t1 | AT1G77580 | 47.500 | 320 | 134 | 5 | 72 | 390 | 62 | 348 | 8.92e-74 | 253 |
| MS.gene73663.t1 | AT1G77580 | 32.168 | 286 | 139 | 6 | 380 | 639 | 516 | 772 | 9.13e-20 | 94.4 |
| MS.gene73663.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene73663.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene73663.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene73663.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene73663.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene73663.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene73663.t1 | AT1G21810 | 33.411 | 431 | 209 | 11 | 218 | 584 | 3 | 419 | 1.07e-40 | 155 |
| MS.gene73663.t1 | AT1G21810 | 28.826 | 281 | 136 | 8 | 386 | 640 | 258 | 500 | 4.64e-13 | 72.4 |
| MS.gene73663.t1 | AT1G47900 | 33.333 | 342 | 160 | 6 | 1 | 275 | 1 | 341 | 8.53e-38 | 151 |
| MS.gene73663.t1 | AT1G47900 | 33.333 | 342 | 160 | 6 | 1 | 275 | 1 | 341 | 8.86e-38 | 151 |
| MS.gene73663.t1 | AT1G47900 | 33.333 | 342 | 160 | 6 | 1 | 275 | 1 | 341 | 8.86e-38 | 151 |
| MS.gene73663.t1 | AT4G36120 | 36.545 | 301 | 161 | 4 | 1 | 273 | 1 | 299 | 2.06e-37 | 150 |
| MS.gene73663.t1 | AT4G36120 | 36.545 | 301 | 161 | 4 | 1 | 273 | 1 | 299 | 2.06e-37 | 150 |
| MS.gene73663.t1 | AT2G23360 | 31.757 | 296 | 135 | 9 | 1 | 273 | 1 | 252 | 1.07e-21 | 100 |
Find 106 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTATCTCCTTCTTTGTTT+TGG | 0.200345 | 4.3:-7975435 | None:intergenic |
| CTGCTCACACTCTTGCTTCT+TGG | 0.211444 | 4.3:-7976458 | None:intergenic |
| TCTCTCAAGTTCGAATCTTC+TGG | 0.215588 | 4.3:-7974574 | None:intergenic |
| AACAGCTAGTAAGCAAAATT+TGG | 0.251696 | 4.3:+7974788 | MS.gene73663:CDS |
| CTGCTTTACCATGTCTTCTT+TGG | 0.253352 | 4.3:-7973863 | None:intergenic |
| TTCAAGCTTAGCAACCTTCT+TGG | 0.263795 | 4.3:-7974817 | None:intergenic |
| CGGCTTCCACTTTCTGTATC+TGG | 0.277252 | 4.3:-7975128 | None:intergenic |
| TGAGTTTATTGAATCTCTTT+TGG | 0.286597 | 4.3:-7976390 | None:intergenic |
| GGAAAAGAAGCTGGAGAAAA+TGG | 0.291680 | 4.3:+7975247 | MS.gene73663:CDS |
| CTGATTTCTCGAGCTGCATT+TGG | 0.306496 | 4.3:-7975310 | None:intergenic |
| AGTGGAAGCCGTTATGTTAA+TGG | 0.328560 | 4.3:+7975140 | MS.gene73663:CDS |
| ATTCTTGAATTGATCAAATT+CGG | 0.336313 | 4.3:-7975015 | None:intergenic |
| GAGAAAAGCCGTAATGGATT+TGG | 0.355781 | 4.3:+7976425 | MS.gene73663:CDS |
| GACTTGAGGAACTAGAATTC+AGG | 0.356240 | 4.3:+7974730 | MS.gene73663:CDS |
| GGTGTACTAACTTCTTCAAT+TGG | 0.366789 | 4.3:-7973763 | None:intergenic |
| CCAGGCGAGACGGAGAGTTC+AGG | 0.368157 | 4.3:+7972938 | MS.gene73663:CDS |
| CATTTAATGTGAATGATAAT+AGG | 0.372447 | 4.3:+7974877 | MS.gene73663:CDS |
| GATTGAAAAGAATGCCGAAT+TGG | 0.383971 | 4.3:+7975226 | MS.gene73663:CDS |
| AGGTACAATGGAAGCTGAAA+TGG | 0.392441 | 4.3:+7975196 | MS.gene73663:CDS |
| CCTGAACTCTCCGTCTCGCC+TGG | 0.392760 | 4.3:-7972938 | None:intergenic |
| GCTCTTGCACTTCTCTGGCT+TGG | 0.397210 | 4.3:-7974506 | None:intergenic |
| ACACAACAAAGTCCCCAAAA+AGG | 0.401435 | 4.3:+7976326 | MS.gene73663:CDS |
| GAATCTCTTCCTCCAATGAA+TGG | 0.402374 | 4.3:-7975511 | None:intergenic |
| TACTAGCTGTTTCAGCAGCT+TGG | 0.405239 | 4.3:-7974776 | None:intergenic |
| GGTGACTAACTCGGTCTTCA+AGG | 0.409043 | 4.3:-7974446 | None:intergenic |
| CGAATTAGCTGCAGCTCTGT+TGG | 0.410377 | 4.3:+7973831 | MS.gene73663:CDS |
| TGAACTTACCAAATCCATTA+CGG | 0.432010 | 4.3:-7976433 | None:intergenic |
| TCGCGATTTGAAGTCAAAAC+AGG | 0.434769 | 4.3:+7975661 | MS.gene73663:CDS |
| TTCAATCAAGAGCAGGAAGT+TGG | 0.455060 | 4.3:+7975562 | MS.gene73663:CDS |
| ATCTGAAATGTTATCTGTAA+AGG | 0.458369 | 4.3:-7974931 | None:intergenic |
| CTAACTTCTTCAATTGGTGC+AGG | 0.462359 | 4.3:-7973757 | None:intergenic |
| ACCGAGTTAGTCACCTTGAT+GGG | 0.462981 | 4.3:+7974454 | MS.gene73663:CDS |
| TGGACAGGAGGAGTTGGTTA+TGG | 0.464689 | 4.3:+7972891 | MS.gene73663:CDS |
| GTTGAAGTCTCTTGCAACAT+TGG | 0.467526 | 4.3:+7976250 | MS.gene73663:CDS |
| CATGGATGATTTCCTTGAGA+TGG | 0.470382 | 4.3:+7975088 | MS.gene73663:CDS |
| GCTGCCTCATACACTCTTTG+AGG | 0.477884 | 4.3:-7974479 | None:intergenic |
| GATAAGAGCAGCAGAATTGA+AGG | 0.478240 | 4.3:+7975340 | MS.gene73663:CDS |
| TGTTAATGGAGGACGAGTAT+TGG | 0.478665 | 4.3:+7975154 | MS.gene73663:CDS |
| GAGACTTGATGCTGTGGAGA+AGG | 0.483646 | 4.3:+7974674 | MS.gene73663:CDS |
| CTGCTTTCCAAGAGATGCAA+TGG | 0.484799 | 4.3:-7976228 | None:intergenic |
| GACCGAGTTAGTCACCTTGA+TGG | 0.485370 | 4.3:+7974453 | MS.gene73663:CDS |
| TGCCGAATTGGAAAAGAAGC+TGG | 0.488229 | 4.3:+7975238 | MS.gene73663:CDS |
| GTTGCTGAAGAAGCTGTCTC+AGG | 0.493553 | 4.3:+7973895 | MS.gene73663:CDS |
| GTATTGGATCAATCTATTGT+TGG | 0.494117 | 4.3:+7975170 | MS.gene73663:CDS |
| AAGTCATCGGAGAAAAGTCC+AGG | 0.496717 | 4.3:+7972920 | MS.gene73663:CDS |
| GGCAAATAACTCACATGACT+CGG | 0.497487 | 4.3:+7974548 | MS.gene73663:CDS |
| GGTGATAGAGTAGCTTGGAT+TGG | 0.502409 | 4.3:-7973718 | None:intergenic |
| CTGCCTCATACACTCTTTGA+GGG | 0.505138 | 4.3:-7974478 | None:intergenic |
| GAAAGAAACCAAAACAAAGA+AGG | 0.505936 | 4.3:+7975427 | MS.gene73663:CDS |
| AGCTCGAGAAATCAGAGAAT+CGG | 0.507513 | 4.3:+7975318 | MS.gene73663:CDS |
| CAAGAAGCAAGAGTGTGAGC+AGG | 0.509068 | 4.3:+7976459 | MS.gene73663:CDS |
| GGGCCCTCAAAGAGTGTATG+AGG | 0.511371 | 4.3:+7974475 | MS.gene73663:CDS |
| AGAATTCAGGATTGCAGAGA+GGG | 0.513958 | 4.3:+7974743 | MS.gene73663:CDS |
| ACTTCACAAGTTAACTCCAT+AGG | 0.515278 | 4.3:-7976302 | None:intergenic |
| AGATAAACTTGATGTAGAGA+TGG | 0.518264 | 4.3:+7975274 | MS.gene73663:CDS |
| CTCAAGTTCAGCAAGATGCC+AGG | 0.522890 | 4.3:+7975615 | MS.gene73663:CDS |
| ATGATTTCCTTGAGATGGAA+AGG | 0.523962 | 4.3:+7975093 | MS.gene73663:CDS |
| ACTCATGAGAAAAGCCGTAA+TGG | 0.524338 | 4.3:+7976419 | MS.gene73663:CDS |
| ATTGGAGGAAGAGATTCAAA+AGG | 0.526916 | 4.3:+7975517 | MS.gene73663:CDS |
| GATAAACTTGATGTAGAGAT+GGG | 0.528053 | 4.3:+7975275 | MS.gene73663:CDS |
| TCAGGACAAAGAACTTGCAT+TGG | 0.528712 | 4.3:+7976175 | MS.gene73663:intron |
| TTCAACTGAGATCAATCTCA+TGG | 0.530613 | 4.3:+7975070 | MS.gene73663:CDS |
| ATCAAGTCTCCTCTGAAGAT+CGG | 0.535787 | 4.3:-7974661 | None:intergenic |
| TTTAAATGGACAGGAGGAGT+TGG | 0.537649 | 4.3:+7972885 | None:intergenic |
| AAGAAGCAAGAGTGTGAGCA+GGG | 0.538699 | 4.3:+7976460 | MS.gene73663:CDS |
| CTCGTCCTCCATTAACATAA+CGG | 0.539926 | 4.3:-7975148 | None:intergenic |
| TTTACAGATAACATTTCAGA+TGG | 0.540438 | 4.3:+7974933 | MS.gene73663:CDS |
| GAGAAAAGTTGCTGAGCTTG+AGG | 0.541808 | 4.3:+7974593 | MS.gene73663:CDS |
| TGATTCAGACAACAGCCCTA+TGG | 0.543080 | 4.3:+7976286 | MS.gene73663:CDS |
| CTTCACAAGTTAACTCCATA+GGG | 0.543569 | 4.3:-7976301 | None:intergenic |
| GCAGGCTTAGATGTGACCTC+TGG | 0.546710 | 4.3:-7973739 | None:intergenic |
| CTGAGAATTCAATCAAGAGC+AGG | 0.555581 | 4.3:+7975555 | MS.gene73663:CDS |
| CAGCAAGCCTTTCCATCTCA+AGG | 0.558005 | 4.3:-7975100 | None:intergenic |
| ACTCTTTGAGGGCCCCATCA+AGG | 0.563213 | 4.3:-7974467 | None:intergenic |
| ACAGATAACATTTCAGATGG+TGG | 0.563408 | 4.3:+7974936 | MS.gene73663:CDS |
| AAATTTGGAGAGCACCAAGA+AGG | 0.563758 | 4.3:+7974803 | MS.gene73663:CDS |
| GATCAATCTATTGTTGGTCA+AGG | 0.566842 | 4.3:+7975176 | MS.gene73663:CDS |
| CCCCATCAAGGTGACTAACT+CGG | 0.567534 | 4.3:-7974455 | None:intergenic |
| CTCAATATAAATTGAAGATG+CGG | 0.569123 | 4.3:-7974907 | None:intergenic |
| AATCAAGAGCAGGAAGTTGG+AGG | 0.569457 | 4.3:+7975565 | MS.gene73663:CDS |
| GCTTTGCCAGATACAGAAAG+TGG | 0.578039 | 4.3:+7975122 | MS.gene73663:CDS |
| GGAGAAAAGTCCAGGCGAGA+CGG | 0.589443 | 4.3:+7972928 | MS.gene73663:CDS |
| TATTGTTGGTCAAGGTACAA+TGG | 0.590943 | 4.3:+7975184 | MS.gene73663:CDS |
| ATCAAGAGCAGGAAGTTGGA+GGG | 0.592927 | 4.3:+7975566 | MS.gene73663:CDS |
| TAGAATTCAGGATTGCAGAG+AGG | 0.594182 | 4.3:+7974742 | MS.gene73663:CDS |
| GCAAATAACTCACATGACTC+GGG | 0.598199 | 4.3:+7974549 | MS.gene73663:CDS |
| TCAGAGGAGACTTGATGCTG+TGG | 0.600308 | 4.3:+7974668 | MS.gene73663:CDS |
| GCTGCAAGACAGAAGAACTC+AGG | 0.602737 | 4.3:+7974423 | MS.gene73663:CDS |
| ACTGAAATTTGCTCAAACTG+AGG | 0.609862 | 4.3:+7975466 | MS.gene73663:CDS |
| GCACTCAGCAAACTTGCTAG+TGG | 0.610257 | 4.3:-7976198 | None:intergenic |
| CTATTCGCTCCGATCTTCAG+AGG | 0.616299 | 4.3:+7974652 | MS.gene73663:CDS |
| CCTCTGGTGATAGAGTAGCT+TGG | 0.616609 | 4.3:-7973723 | None:intergenic |
| GAACATGAGTCAGAACAGCT+TGG | 0.617775 | 4.3:-7974978 | None:intergenic |
| GGCTGTTGTCTGAATCAAGT+AGG | 0.621986 | 4.3:-7976280 | None:intergenic |
| AATTAGTGCCAAAGAAGACA+TGG | 0.626226 | 4.3:+7973855 | MS.gene73663:CDS |
| GCAAAAGATCTATGAAGCTG+TGG | 0.627003 | 4.3:+7974527 | MS.gene73663:CDS |
| GAGTCATGGATTTCAGTCTA+CGG | 0.630257 | 4.3:-7974848 | None:intergenic |
| CTGGGAGAAGGCTGAAAACG+AGG | 0.637297 | 4.3:+7974374 | MS.gene73663:CDS |
| GTTATGGCGGAGAAAGTCAT+CGG | 0.642989 | 4.3:+7972907 | MS.gene73663:CDS |
| GGAAGCCGTTATGTTAATGG+AGG | 0.654516 | 4.3:+7975143 | MS.gene73663:CDS |
| TGAGCTGCAATCTCGACTTG+AGG | 0.664109 | 4.3:+7974716 | MS.gene73663:CDS |
| AGATGCCAGGACTTTGCACA+AGG | 0.664420 | 4.3:+7975628 | MS.gene73663:CDS |
| CCGAGTTAGTCACCTTGATG+GGG | 0.664423 | 4.3:+7974455 | MS.gene73663:CDS |
| ACAGGAGGAGTTGGTTATGG+CGG | 0.665341 | 4.3:+7972894 | MS.gene73663:CDS |
| AAAGAAGCTGGAGAAAATGG+AGG | 0.684854 | 4.3:+7975250 | MS.gene73663:CDS |
| CCAAGCTACTCTATCACCAG+AGG | 0.697015 | 4.3:+7973723 | MS.gene73663:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTGTTTTTCATTTTATTT+AGG | + | chr4.3:7974351-7974370 | MS.gene73663:intron | 15.0% |
| !! | ATCATAATCTTCTAACTTAA+TGG | + | chr4.3:7974288-7974307 | MS.gene73663:intron | 20.0% |
| !! | ATTCTTGAATTGATCAAATT+CGG | - | chr4.3:7975018-7975037 | None:intergenic | 20.0% |
| !! | ATTGCAAAATACATTAAACA+CGG | - | chr4.3:7975726-7975745 | None:intergenic | 20.0% |
| !! | CATTTAATGTGAATGATAAT+AGG | + | chr4.3:7974877-7974896 | MS.gene73663:CDS | 20.0% |
| !! | GAGATGAAAAAAAAAATTGA+GGG | + | chr4.3:7973216-7973235 | MS.gene73663:intron | 20.0% |
| !! | TAATCTACGAATTAAATATC+TGG | - | chr4.3:7973936-7973955 | None:intergenic | 20.0% |
| !! | TCATAATCTTCTAACTTAAT+GGG | + | chr4.3:7974289-7974308 | MS.gene73663:intron | 20.0% |
| !!! | ACCTTCTTCTTTATATTTTT+TGG | - | chr4.3:7973788-7973807 | None:intergenic | 20.0% |
| !!! | ATATCTTTTCATATATACCT+TGG | - | chr4.3:7974332-7974351 | None:intergenic | 20.0% |
| !!! | CAGATACTAAGTTTTTTATA+TGG | - | chr4.3:7976150-7976169 | None:intergenic | 20.0% |
| !!! | CCTTCTTCTTTATATTTTTT+GGG | - | chr4.3:7973787-7973806 | None:intergenic | 20.0% |
| !!! | CTATTTTCATCTATAATAAC+AGG | + | chr4.3:7973396-7973415 | MS.gene73663:intron | 20.0% |
| !!! | TTTTTCATTTTATTTAGGCT+GGG | + | chr4.3:7974356-7974375 | MS.gene73663:intron | 20.0% |
| !!! | TTTTTTTTTTCTAAGCATTC+AGG | + | chr4.3:7973602-7973621 | MS.gene73663:intron | 20.0% |
| ! | AAAATTAATTACAGCTGCAA+AGG | - | chr4.3:7974077-7974096 | None:intergenic | 25.0% |
| ! | AATCAGATTCATCACATTAT+TGG | - | chr4.3:7973661-7973680 | None:intergenic | 25.0% |
| ! | AATGCAATTTAGTTGTAGTT+TGG | - | chr4.3:7975943-7975962 | None:intergenic | 25.0% |
| ! | ACTAAATTGCATTTGTAGTT+TGG | + | chr4.3:7975950-7975969 | MS.gene73663:intron | 25.0% |
| ! | ATTGTTTCAACCAACAAAAA+AGG | - | chr4.3:7975816-7975835 | None:intergenic | 25.0% |
| ! | CCCAAAAAATATAAAGAAGA+AGG | + | chr4.3:7973784-7973803 | MS.gene73663:CDS | 25.0% |
| ! | CTCAATATAAATTGAAGATG+CGG | - | chr4.3:7974910-7974929 | None:intergenic | 25.0% |
| ! | GAATGTGTACTAGATAATAT+GGG | + | chr4.3:7973145-7973164 | MS.gene73663:intron | 25.0% |
| ! | GATTTCAAAAATCCATTCAT+TGG | + | chr4.3:7975499-7975518 | MS.gene73663:CDS | 25.0% |
| ! | GGAGATGAAAAAAAAAATTG+AGG | + | chr4.3:7973215-7973234 | MS.gene73663:intron | 25.0% |
| ! | GTTAAGTAATCATATTGCAT+TGG | + | chr4.3:7976115-7976134 | MS.gene73663:intron | 25.0% |
| ! | TCATAAAAAGTAATGCTAGA+AGG | - | chr4.3:7975760-7975779 | None:intergenic | 25.0% |
| ! | TTCAAGAATAAAAAGACTAC+TGG | + | chr4.3:7975029-7975048 | MS.gene73663:CDS | 25.0% |
| ! | TTGCAAAATACATTAAACAC+GGG | - | chr4.3:7975725-7975744 | None:intergenic | 25.0% |
| ! | TTTACAGATAACATTTCAGA+TGG | + | chr4.3:7974933-7974952 | MS.gene73663:CDS | 25.0% |
| !! | ATCTGAAATGTTATCTGTAA+AGG | - | chr4.3:7974934-7974953 | None:intergenic | 25.0% |
| !! | ATTAAATGTTTTACGAGTCA+TGG | - | chr4.3:7974865-7974884 | None:intergenic | 25.0% |
| !! | ATTTTCTCAAGTGAAAATCT+CGG | + | chr4.3:7973181-7973200 | MS.gene73663:intron | 25.0% |
| !! | GAGTTTATTGAATCTCTTTT+GGG | - | chr4.3:7976392-7976411 | None:intergenic | 25.0% |
| !! | TGAGTTTATTGAATCTCTTT+TGG | - | chr4.3:7976393-7976412 | None:intergenic | 25.0% |
| !!! | AAGAAAGTGTCTTTACTTTA+AGG | + | chr4.3:7973303-7973322 | MS.gene73663:intron | 25.0% |
| !!! | AGAAAGTGTCTTTACTTTAA+GGG | + | chr4.3:7973304-7973323 | MS.gene73663:intron | 25.0% |
| !!! | ATTCTTCAATCCTTTTTTGT+TGG | + | chr4.3:7975803-7975822 | MS.gene73663:intron | 25.0% |
| !!! | GTTTTTCATTTTATTTAGGC+TGG | + | chr4.3:7974355-7974374 | MS.gene73663:intron | 25.0% |
| !!! | TCAGTTTGCTAATACTTATT+TGG | + | chr4.3:7975684-7975703 | MS.gene73663:intron | 25.0% |
| AAAAACTTATCTACCAAACC+AGG | - | chr4.3:7974037-7974056 | None:intergenic | 30.0% | |
| AAAACTTATCTACCAAACCA+GGG | - | chr4.3:7974036-7974055 | None:intergenic | 30.0% | |
| AAACTATCTCAAGTTACAGT+AGG | - | chr4.3:7973448-7973467 | None:intergenic | 30.0% | |
| AACAGCTAGTAAGCAAAATT+TGG | + | chr4.3:7974788-7974807 | MS.gene73663:CDS | 30.0% | |
| AACATACATGCAGTCAAAAA+TGG | - | chr4.3:7973039-7973058 | None:intergenic | 30.0% | |
| AACTATCTCAAGTTACAGTA+GGG | - | chr4.3:7973447-7973466 | None:intergenic | 30.0% | |
| AACTGCTATTACTGGTATTT+AGG | - | chr4.3:7976098-7976117 | None:intergenic | 30.0% | |
| AAGGTAAGAAAAATGAACCA+TGG | - | chr4.3:7974251-7974270 | None:intergenic | 30.0% | |
| AGATAAACTTGATGTAGAGA+TGG | + | chr4.3:7975274-7975293 | MS.gene73663:CDS | 30.0% | |
| CATCTATAATAACAGGATAC+CGG | + | chr4.3:7973403-7973422 | MS.gene73663:intron | 30.0% | |
| GAAAGAAACCAAAACAAAGA+AGG | + | chr4.3:7975427-7975446 | MS.gene73663:CDS | 30.0% | |
| GAAGATTATGATGATAGTCA+TGG | - | chr4.3:7974280-7974299 | None:intergenic | 30.0% | |
| GATAAACTTGATGTAGAGAT+GGG | + | chr4.3:7975275-7975294 | MS.gene73663:CDS | 30.0% | |
| GATTACTTAACTGCTATTAC+TGG | - | chr4.3:7976106-7976125 | None:intergenic | 30.0% | |
| GGAATGTGTACTAGATAATA+TGG | + | chr4.3:7973144-7973163 | MS.gene73663:intron | 30.0% | |
| GTATATCAATAAATTTGCCC+TGG | + | chr4.3:7974016-7974035 | MS.gene73663:intron | 30.0% | |
| GTATTGGATCAATCTATTGT+TGG | + | chr4.3:7975170-7975189 | MS.gene73663:CDS | 30.0% | |
| TATGTTGTAATGAATCTGCT+CGG | + | chr4.3:7973627-7973646 | MS.gene73663:intron | 30.0% | |
| TCATATAAACAGCAACACAA+AGG | - | chr4.3:7976011-7976030 | None:intergenic | 30.0% | |
| TGAAAACAATGGTTATTGCT+CGG | + | chr4.3:7973486-7973505 | MS.gene73663:intron | 30.0% | |
| TGAACTTACCAAATCCATTA+CGG | - | chr4.3:7976436-7976455 | None:intergenic | 30.0% | |
| TTCAAAAATCCATTCATTGG+AGG | + | chr4.3:7975502-7975521 | MS.gene73663:CDS | 30.0% | |
| TTTAGTTGTAGTTTGGACTA+TGG | - | chr4.3:7975936-7975955 | None:intergenic | 30.0% | |
| TTTCACAGAAGTTTAAACCA+AGG | + | chr4.3:7974312-7974331 | MS.gene73663:intron | 30.0% | |
| ! | AATTTTTCACCTCCTTTTTG+GGG | - | chr4.3:7976341-7976360 | None:intergenic | 30.0% |
| ! | AGAAAGATTTTCTGATGAAC+AGG | + | chr4.3:7972979-7972998 | MS.gene73663:CDS | 30.0% |
| ! | CAATTTTTCACCTCCTTTTT+GGG | - | chr4.3:7976342-7976361 | None:intergenic | 30.0% |
| ! | GAGATAGTTTGTAAATGTCT+AGG | + | chr4.3:7973458-7973477 | MS.gene73663:intron | 30.0% |
| ! | GAGATTTTCACTTGAGAAAA+TGG | - | chr4.3:7973182-7973201 | None:intergenic | 30.0% |
| ! | TCAATTTTTCACCTCCTTTT+TGG | - | chr4.3:7976343-7976362 | None:intergenic | 30.0% |
| !! | AACTATCTCCTTCTTTGTTT+TGG | - | chr4.3:7975438-7975457 | None:intergenic | 30.0% |
| !! | AACTTAGTATCTGCTATTTC+AGG | + | chr4.3:7976157-7976176 | MS.gene73663:intron | 30.0% |
| !! | ATGGTTCATTTTTCTTACCT+TGG | + | chr4.3:7974250-7974269 | MS.gene73663:intron | 30.0% |
| !! | GAAAGTGTCTTTACTTTAAG+GGG | + | chr4.3:7973305-7973324 | MS.gene73663:intron | 30.0% |
| !! | TGGTTCATTTTTCTTACCTT+GGG | + | chr4.3:7974251-7974270 | MS.gene73663:intron | 30.0% |
| AAACAGCAACACAAAGGAAT+TGG | - | chr4.3:7976005-7976024 | None:intergenic | 35.0% | |
| AACAGCAACACAAAGGAATT+GGG | - | chr4.3:7976004-7976023 | None:intergenic | 35.0% | |
| AATTAGTGCCAAAGAAGACA+TGG | + | chr4.3:7973855-7973874 | MS.gene73663:CDS | 35.0% | |
| ACAGATAACATTTCAGATGG+TGG | + | chr4.3:7974936-7974955 | MS.gene73663:CDS | 35.0% | |
| ACTTCACAAGTTAACTCCAT+AGG | - | chr4.3:7976305-7976324 | None:intergenic | 35.0% | |
| ATGATTTCCTTGAGATGGAA+AGG | + | chr4.3:7975093-7975112 | MS.gene73663:CDS | 35.0% | |
| ATTGGAGGAAGAGATTCAAA+AGG | + | chr4.3:7975517-7975536 | MS.gene73663:CDS | 35.0% | |
| CAAAAAACCATTGCATCTCT+TGG | + | chr4.3:7976221-7976240 | MS.gene73663:CDS | 35.0% | |
| CTTCACAAGTTAACTCCATA+GGG | - | chr4.3:7976304-7976323 | None:intergenic | 35.0% | |
| GATCAATCTATTGTTGGTCA+AGG | + | chr4.3:7975176-7975195 | MS.gene73663:CDS | 35.0% | |
| GATTGAAAAGAATGCCGAAT+TGG | + | chr4.3:7975226-7975245 | MS.gene73663:CDS | 35.0% | |
| GGTGTACTAACTTCTTCAAT+TGG | - | chr4.3:7973766-7973785 | None:intergenic | 35.0% | |
| TATTGTTGGTCAAGGTACAA+TGG | + | chr4.3:7975184-7975203 | MS.gene73663:CDS | 35.0% | |
| TCAATAAATTTGCCCTGGTT+TGG | + | chr4.3:7974021-7974040 | MS.gene73663:intron | 35.0% | |
| TCTAGGCTACATGAAAACAA+TGG | + | chr4.3:7973475-7973494 | MS.gene73663:intron | 35.0% | |
| TCTTTCACAATTCAGTCTTG+TGG | + | chr4.3:7973122-7973141 | MS.gene73663:intron | 35.0% | |
| TGTCTCAGGTATTTACTGTT+TGG | + | chr4.3:7973909-7973928 | MS.gene73663:intron | 35.0% | |
| TTCAACTGAGATCAATCTCA+TGG | + | chr4.3:7975070-7975089 | MS.gene73663:CDS | 35.0% | |
| TTTGTTGCAATGAATCTGCT+CGG | + | chr4.3:7973555-7973574 | MS.gene73663:intron | 35.0% | |
| ! | AAGATTTTCTGATGAACAGG+TGG | + | chr4.3:7972982-7973001 | MS.gene73663:intron | 35.0% |
| ! | ACTGAAATTTGCTCAAACTG+AGG | + | chr4.3:7975466-7975485 | MS.gene73663:CDS | 35.0% |
| ! | CAATTTTACTCACTGTCACA+TGG | + | chr4.3:7973074-7973093 | MS.gene73663:intron | 35.0% |
| ! | CTTTCACAATTCAGTCTTGT+GGG | + | chr4.3:7973123-7973142 | MS.gene73663:intron | 35.0% |
| !! | AAAATCTCGGTGTTTGTTGA+AGG | + | chr4.3:7973194-7973213 | MS.gene73663:intron | 35.0% |
| !! | ATTTTATTTAGGCTGGGAGA+AGG | + | chr4.3:7974362-7974381 | MS.gene73663:intron | 35.0% |
| !!! | AGTTCGCTTTTTAAGCATTC+AGG | + | chr4.3:7973530-7973549 | MS.gene73663:intron | 35.0% |
| !!! | CAAGAGATGCAATGGTTTTT+TGG | - | chr4.3:7976223-7976242 | None:intergenic | 35.0% |
| AAAGAAGCTGGAGAAAATGG+AGG | + | chr4.3:7975250-7975269 | MS.gene73663:CDS | 40.0% | |
| ACACAACAAAGTCCCCAAAA+AGG | + | chr4.3:7976326-7976345 | MS.gene73663:CDS | 40.0% | |
| ACAGCAACACAAAGGAATTG+GGG | - | chr4.3:7976003-7976022 | None:intergenic | 40.0% | |
| ACTCATGAGAAAAGCCGTAA+TGG | + | chr4.3:7976419-7976438 | MS.gene73663:CDS | 40.0% | |
| AGAATTCAGGATTGCAGAGA+GGG | + | chr4.3:7974743-7974762 | MS.gene73663:CDS | 40.0% | |
| AGCTCGAGAAATCAGAGAAT+CGG | + | chr4.3:7975318-7975337 | MS.gene73663:CDS | 40.0% | |
| AGGTACAATGGAAGCTGAAA+TGG | + | chr4.3:7975196-7975215 | MS.gene73663:CDS | 40.0% | |
| AGTGGAAGCCGTTATGTTAA+TGG | + | chr4.3:7975140-7975159 | MS.gene73663:CDS | 40.0% | |
| ATACCTTCACAGTTACAGCA+TGG | - | chr4.3:7973696-7973715 | None:intergenic | 40.0% | |
| CATGGATGATTTCCTTGAGA+TGG | + | chr4.3:7975088-7975107 | MS.gene73663:CDS | 40.0% | |
| CTAACTTCTTCAATTGGTGC+AGG | - | chr4.3:7973760-7973779 | None:intergenic | 40.0% | |
| CTCGTCCTCCATTAACATAA+CGG | - | chr4.3:7975151-7975170 | None:intergenic | 40.0% | |
| CTGAGAATTCAATCAAGAGC+AGG | + | chr4.3:7975555-7975574 | MS.gene73663:CDS | 40.0% | |
| CTGCTTTACCATGTCTTCTT+TGG | - | chr4.3:7973866-7973885 | None:intergenic | 40.0% | |
| GAATCTCTTCCTCCAATGAA+TGG | - | chr4.3:7975514-7975533 | None:intergenic | 40.0% | |
| GACAACGAGAGCAATTATTC+CGG | - | chr4.3:7973425-7973444 | None:intergenic | 40.0% | |
| GACTTGAGGAACTAGAATTC+AGG | + | chr4.3:7974730-7974749 | MS.gene73663:CDS | 40.0% | |
| GAGTCATGGATTTCAGTCTA+CGG | - | chr4.3:7974851-7974870 | None:intergenic | 40.0% | |
| GATAAGAGCAGCAGAATTGA+AGG | + | chr4.3:7975340-7975359 | MS.gene73663:CDS | 40.0% | |
| GCAAAAGATCTATGAAGCTG+TGG | + | chr4.3:7974527-7974546 | MS.gene73663:CDS | 40.0% | |
| GCAAATAACTCACATGACTC+GGG | + | chr4.3:7974549-7974568 | MS.gene73663:CDS | 40.0% | |
| GGAAAAGAAGCTGGAGAAAA+TGG | + | chr4.3:7975247-7975266 | MS.gene73663:CDS | 40.0% | |
| GGCAAATAACTCACATGACT+CGG | + | chr4.3:7974548-7974567 | MS.gene73663:CDS | 40.0% | |
| GTTGAAGTCTCTTGCAACAT+TGG | + | chr4.3:7976250-7976269 | MS.gene73663:CDS | 40.0% | |
| TACCTTCACAGTTACAGCAT+GGG | - | chr4.3:7973695-7973714 | None:intergenic | 40.0% | |
| TACTCACTGTCACATGGTTT+GGG | + | chr4.3:7973080-7973099 | MS.gene73663:intron | 40.0% | |
| TAGAATTCAGGATTGCAGAG+AGG | + | chr4.3:7974742-7974761 | MS.gene73663:CDS | 40.0% | |
| TCAGGACAAAGAACTTGCAT+TGG | + | chr4.3:7976175-7976194 | MS.gene73663:intron | 40.0% | |
| TCTCTCAAGTTCGAATCTTC+TGG | - | chr4.3:7974577-7974596 | None:intergenic | 40.0% | |
| TGCATTTGTAGTTTGGACTC+TGG | + | chr4.3:7975957-7975976 | MS.gene73663:intron | 40.0% | |
| TGTTAATGGAGGACGAGTAT+TGG | + | chr4.3:7975154-7975173 | MS.gene73663:CDS | 40.0% | |
| TGTTGCAGACATTGTGAAAC+AGG | + | chr4.3:7973276-7973295 | MS.gene73663:intron | 40.0% | |
| TTACTCACTGTCACATGGTT+TGG | + | chr4.3:7973079-7973098 | MS.gene73663:intron | 40.0% | |
| TTCAAGCTTAGCAACCTTCT+TGG | - | chr4.3:7974820-7974839 | None:intergenic | 40.0% | |
| TTCAATCAAGAGCAGGAAGT+TGG | + | chr4.3:7975562-7975581 | MS.gene73663:CDS | 40.0% | |
| ! | AAAAATTGAGGGCGTGAATG+TGG | + | chr4.3:7973227-7973246 | MS.gene73663:intron | 40.0% |
| ! | ATCAAGTCTCCTCTGAAGAT+CGG | - | chr4.3:7974664-7974683 | None:intergenic | 40.0% |
| ! | ATTTTCCTTGTGCAAAGTCC+TGG | - | chr4.3:7975636-7975655 | None:intergenic | 40.0% |
| ! | CTCCAGCTTCTTTTCCAATT+CGG | - | chr4.3:7975243-7975262 | None:intergenic | 40.0% |
| ! | TCGCGATTTGAAGTCAAAAC+AGG | + | chr4.3:7975661-7975680 | MS.gene73663:CDS | 40.0% |
| ! | TGCTTCTTTTTGCTTGTCCA+TGG | + | chr4.3:7974231-7974250 | MS.gene73663:intron | 40.0% |
| !! | AAATTTGGAGAGCACCAAGA+AGG | + | chr4.3:7974803-7974822 | MS.gene73663:CDS | 40.0% |
| !! | GAGAAAAGCCGTAATGGATT+TGG | + | chr4.3:7976425-7976444 | MS.gene73663:CDS | 40.0% |
| AAGTCATCGGAGAAAAGTCC+AGG | + | chr4.3:7972920-7972939 | MS.gene73663:CDS | 45.0% | |
| AATCAAGAGCAGGAAGTTGG+AGG | + | chr4.3:7975565-7975584 | MS.gene73663:CDS | 45.0% | |
| ACCGAGTTAGTCACCTTGAT+GGG | + | chr4.3:7974454-7974473 | MS.gene73663:CDS | 45.0% | |
| ATCAAGAGCAGGAAGTTGGA+GGG | + | chr4.3:7975566-7975585 | MS.gene73663:CDS | 45.0% | |
| ATGATAGTCATGGCTTCCCA+AGG | - | chr4.3:7974270-7974289 | None:intergenic | 45.0% | |
| CAACAAAGTCCCCAAAAAGG+AGG | + | chr4.3:7976329-7976348 | MS.gene73663:CDS | 45.0% | |
| CAGCAACACAAAGGAATTGG+GGG | - | chr4.3:7976002-7976021 | None:intergenic | 45.0% | |
| CTCGGTCTGCAAATTTCTCA+TGG | + | chr4.3:7973504-7973523 | MS.gene73663:intron | 45.0% | |
| CTGATTTCTCGAGCTGCATT+TGG | - | chr4.3:7975313-7975332 | None:intergenic | 45.0% | |
| CTGCCTCATACACTCTTTGA+GGG | - | chr4.3:7974481-7974500 | None:intergenic | 45.0% | |
| CTGCTTTCCAAGAGATGCAA+TGG | - | chr4.3:7976231-7976250 | None:intergenic | 45.0% | |
| CTTCACAACCATCATGATCC+CGG | + | chr4.3:7974174-7974193 | MS.gene73663:intron | 45.0% | |
| GAACATGAGTCAGAACAGCT+TGG | - | chr4.3:7974981-7975000 | None:intergenic | 45.0% | |
| GAGAAAAGTTGCTGAGCTTG+AGG | + | chr4.3:7974593-7974612 | MS.gene73663:CDS | 45.0% | |
| GCTTTGCCAGATACAGAAAG+TGG | + | chr4.3:7975122-7975141 | MS.gene73663:CDS | 45.0% | |
| GGAAGCCGTTATGTTAATGG+AGG | + | chr4.3:7975143-7975162 | MS.gene73663:CDS | 45.0% | |
| GGCTGTTGTCTGAATCAAGT+AGG | - | chr4.3:7976283-7976302 | None:intergenic | 45.0% | |
| GGTGATAGAGTAGCTTGGAT+TGG | - | chr4.3:7973721-7973740 | None:intergenic | 45.0% | |
| TCCTAACTCCTAACGTGAAC+CGG | - | chr4.3:7974196-7974215 | None:intergenic | 45.0% | |
| TGATTCAGACAACAGCCCTA+TGG | + | chr4.3:7976286-7976305 | MS.gene73663:CDS | 45.0% | |
| TGCCGAATTGGAAAAGAAGC+TGG | + | chr4.3:7975238-7975257 | MS.gene73663:CDS | 45.0% | |
| TTCCCATGCTGTAACTGTGA+AGG | + | chr4.3:7973690-7973709 | MS.gene73663:intron | 45.0% | |
| ! | AAGAAGCAAGAGTGTGAGCA+GGG | + | chr4.3:7976460-7976479 | MS.gene73663:CDS | 45.0% |
| ! | CTTTTGCTCTTGCACTTCTC+TGG | - | chr4.3:7974514-7974533 | None:intergenic | 45.0% |
| ! | GTTATGGCGGAGAAAGTCAT+CGG | + | chr4.3:7972907-7972926 | MS.gene73663:CDS | 45.0% |
| ! | TACTAGCTGTTTCAGCAGCT+TGG | - | chr4.3:7974779-7974798 | None:intergenic | 45.0% |
| AACGTGAACCGGGATCATGA+TGG | - | chr4.3:7974185-7974204 | None:intergenic | 50.0% | |
| AGATGCCAGGACTTTGCACA+AGG | + | chr4.3:7975628-7975647 | MS.gene73663:CDS | 50.0% | |
| CAGCAAGCCTTTCCATCTCA+AGG | - | chr4.3:7975103-7975122 | None:intergenic | 50.0% | |
| CCAAGCTACTCTATCACCAG+AGG | + | chr4.3:7973723-7973742 | MS.gene73663:CDS | 50.0% | |
| CCCCATCAAGGTGACTAACT+CGG | - | chr4.3:7974458-7974477 | None:intergenic | 50.0% | |
| CCGAGTTAGTCACCTTGATG+GGG | + | chr4.3:7974455-7974474 | MS.gene73663:CDS | 50.0% | |
| CCTAACTCCTAACGTGAACC+GGG | - | chr4.3:7974195-7974214 | None:intergenic | 50.0% | |
| CCTCTGGTGATAGAGTAGCT+TGG | - | chr4.3:7973726-7973745 | None:intergenic | 50.0% | |
| CGAATTAGCTGCAGCTCTGT+TGG | + | chr4.3:7973831-7973850 | MS.gene73663:CDS | 50.0% | |
| CGGCTTCCACTTTCTGTATC+TGG | - | chr4.3:7975131-7975150 | None:intergenic | 50.0% | |
| CTATTCGCTCCGATCTTCAG+AGG | + | chr4.3:7974652-7974671 | MS.gene73663:CDS | 50.0% | |
| CTCAAGTTCAGCAAGATGCC+AGG | + | chr4.3:7975615-7975634 | MS.gene73663:CDS | 50.0% | |
| CTCGGTCTGCACATTCTTCA+TGG | + | chr4.3:7973573-7973592 | MS.gene73663:intron | 50.0% | |
| CTGCTCACACTCTTGCTTCT+TGG | - | chr4.3:7976461-7976480 | None:intergenic | 50.0% | |
| GACCGAGTTAGTCACCTTGA+TGG | + | chr4.3:7974453-7974472 | MS.gene73663:CDS | 50.0% | |
| GAGACTTGATGCTGTGGAGA+AGG | + | chr4.3:7974674-7974693 | MS.gene73663:CDS | 50.0% | |
| GCTAGTCAACAGCAGCTTGT+CGG | - | chr4.3:7975891-7975910 | None:intergenic | 50.0% | |
| GCTGCAAGACAGAAGAACTC+AGG | + | chr4.3:7974423-7974442 | MS.gene73663:CDS | 50.0% | |
| GCTGCCTCATACACTCTTTG+AGG | - | chr4.3:7974482-7974501 | None:intergenic | 50.0% | |
| GGTGACTAACTCGGTCTTCA+AGG | - | chr4.3:7974449-7974468 | None:intergenic | 50.0% | |
| GTTGCTGAAGAAGCTGTCTC+AGG | + | chr4.3:7973895-7973914 | MS.gene73663:CDS | 50.0% | |
| TCAGAGGAGACTTGATGCTG+TGG | + | chr4.3:7974668-7974687 | MS.gene73663:CDS | 50.0% | |
| TCATGATCCCGGTTCACGTT+AGG | + | chr4.3:7974185-7974204 | MS.gene73663:intron | 50.0% | |
| ! | ACAGGAGGAGTTGGTTATGG+CGG | + | chr4.3:7972894-7972913 | MS.gene73663:CDS | 50.0% |
| ! | CAAGAAGCAAGAGTGTGAGC+AGG | + | chr4.3:7976459-7976478 | MS.gene73663:CDS | 50.0% |
| ! | GTAGTTTGGACTCTGGAAGC+AGG | + | chr4.3:7975964-7975983 | MS.gene73663:intron | 50.0% |
| ! | TGAGCTGCAATCTCGACTTG+AGG | + | chr4.3:7974716-7974735 | MS.gene73663:CDS | 50.0% |
| ! | TGGACAGGAGGAGTTGGTTA+TGG | + | chr4.3:7972891-7972910 | MS.gene73663:CDS | 50.0% |
| !! | GCACTCAGCAAACTTGCTAG+TGG | - | chr4.3:7976201-7976220 | None:intergenic | 50.0% |
| AGCAGCTTGTCGGTAGTCGA+CGG | - | chr4.3:7975881-7975900 | None:intergenic | 55.0% | |
| CCCGGTTCACGTTAGGAGTT+AGG | + | chr4.3:7974192-7974211 | MS.gene73663:intron | 55.0% | |
| CTGGGAGAAGGCTGAAAACG+AGG | + | chr4.3:7974374-7974393 | MS.gene73663:CDS | 55.0% | |
| GCAGGCTTAGATGTGACCTC+TGG | - | chr4.3:7973742-7973761 | None:intergenic | 55.0% | |
| GCTCTTGCACTTCTCTGGCT+TGG | - | chr4.3:7974509-7974528 | None:intergenic | 55.0% | |
| GGAGAAAAGTCCAGGCGAGA+CGG | + | chr4.3:7972928-7972947 | MS.gene73663:CDS | 55.0% | |
| ! | ACTCTTTGAGGGCCCCATCA+AGG | - | chr4.3:7974470-7974489 | None:intergenic | 55.0% |
| ! | GGGCCCTCAAAGAGTGTATG+AGG | + | chr4.3:7974475-7974494 | MS.gene73663:CDS | 55.0% |
| CCAGGCGAGACGGAGAGTTC+AGG | + | chr4.3:7972938-7972957 | MS.gene73663:CDS | 65.0% | |
| CCTGAACTCTCCGTCTCGCC+TGG | - | chr4.3:7972941-7972960 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 7972890 | 7976490 | 7972890 | ID=MS.gene73663 |
| chr4.3 | mRNA | 7972890 | 7976490 | 7972890 | ID=MS.gene73663.t1;Parent=MS.gene73663 |
| chr4.3 | exon | 7972890 | 7973000 | 7972890 | ID=MS.gene73663.t1.exon1;Parent=MS.gene73663.t1 |
| chr4.3 | CDS | 7972890 | 7973000 | 7972890 | ID=cds.MS.gene73663.t1;Parent=MS.gene73663.t1 |
| chr4.3 | exon | 7973712 | 7973916 | 7973712 | ID=MS.gene73663.t1.exon2;Parent=MS.gene73663.t1 |
| chr4.3 | CDS | 7973712 | 7973916 | 7973712 | ID=cds.MS.gene73663.t1;Parent=MS.gene73663.t1 |
| chr4.3 | exon | 7974373 | 7975682 | 7974373 | ID=MS.gene73663.t1.exon3;Parent=MS.gene73663.t1 |
| chr4.3 | CDS | 7974373 | 7975682 | 7974373 | ID=cds.MS.gene73663.t1;Parent=MS.gene73663.t1 |
| chr4.3 | exon | 7976179 | 7976490 | 7976179 | ID=MS.gene73663.t1.exon4;Parent=MS.gene73663.t1 |
| chr4.3 | CDS | 7976179 | 7976490 | 7976179 | ID=cds.MS.gene73663.t1;Parent=MS.gene73663.t1 |
| Gene Sequence |
| Protein sequence |
