AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035688

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035688.t1 MTR_4g128720 96.061 457 18 0 1 457 1 457 0.0 914
MS.gene035688.t1 MTR_4g128690 77.462 457 100 1 1 457 1 454 0.0 701
MS.gene035688.t1 MTR_8g083290 30.165 484 265 16 15 452 4 460 8.50e-52 181
MS.gene035688.t1 MTR_6g038240 28.414 454 286 13 15 447 11 446 4.28e-51 179
MS.gene035688.t1 MTR_5g464810 29.958 474 291 14 15 455 12 477 1.54e-50 178
MS.gene035688.t1 MTR_5g064240 29.958 474 291 14 15 455 12 477 1.54e-50 178
MS.gene035688.t1 MTR_3g479520 26.987 478 308 11 12 455 12 482 1.63e-50 179
MS.gene035688.t1 MTR_5g035580 28.017 464 294 12 14 457 12 455 3.88e-50 177
MS.gene035688.t1 MTR_3g069690 27.511 458 303 9 15 457 8 451 1.46e-49 175
MS.gene035688.t1 MTR_3g069710 27.074 458 301 10 16 457 13 453 2.52e-49 175
MS.gene035688.t1 MTR_3g479490 25.684 475 312 13 12 452 3 470 3.34e-49 175
MS.gene035688.t1 MTR_6g038300 27.097 465 297 13 15 456 11 456 1.08e-48 173
MS.gene035688.t1 MTR_5g035560 28.289 456 293 10 14 452 10 448 1.73e-48 173
MS.gene035688.t1 MTR_6g013440 29.175 473 300 11 15 455 11 480 2.90e-48 172
MS.gene035688.t1 MTR_5g464760 30.655 473 285 16 15 452 12 476 5.56e-48 172
MS.gene035688.t1 MTR_7g080950 27.669 459 295 11 13 452 4 444 1.22e-47 170
MS.gene035688.t1 MTR_6g014040 27.848 474 306 11 15 455 10 480 1.41e-47 171
MS.gene035688.t1 MTR_0036s0220 28.025 471 304 13 15 455 12 477 2.67e-47 170
MS.gene035688.t1 MTR_6g013450 27.975 479 299 13 15 455 10 480 4.05e-47 169
MS.gene035688.t1 MTR_7g011470 28.664 464 300 10 15 455 10 465 1.28e-46 167
MS.gene035688.t1 MTR_8g077590 27.273 462 303 10 15 451 9 462 1.96e-46 167
MS.gene035688.t1 MTR_1g107350 27.754 472 297 11 14 453 7 466 2.54e-46 167
MS.gene035688.t1 MTR_4g485630 30.515 485 283 14 12 457 6 475 2.82e-46 167
MS.gene035688.t1 MTR_3g079480 25.506 494 319 12 1 453 1 486 3.91e-46 167
MS.gene035688.t1 MTR_0078s0010 29.325 474 281 14 15 451 6 462 4.09e-46 166
MS.gene035688.t1 MTR_0288s0020 27.862 463 300 9 15 455 10 460 6.38e-46 166
MS.gene035688.t1 MTR_6g014250 25.996 477 314 9 12 455 7 477 9.54e-46 166
MS.gene035688.t1 MTR_6g014220 29.412 476 293 13 15 455 10 477 1.30e-45 165
MS.gene035688.t1 MTR_6g013900 30.130 385 238 7 98 455 98 478 2.01e-45 165
MS.gene035688.t1 MTR_7g047030 29.387 473 282 14 15 451 6 462 4.35e-45 164
MS.gene035688.t1 MTR_7g047270 29.387 473 282 14 15 451 6 462 4.35e-45 164
MS.gene035688.t1 MTR_8g012745 29.310 464 282 15 15 444 6 457 5.38e-45 163
MS.gene035688.t1 MTR_7g080900 27.789 475 299 15 5 457 2 454 7.40e-45 162
MS.gene035688.t1 MTR_7g011470 28.017 464 299 9 15 455 10 461 8.75e-45 162
MS.gene035688.t1 MTR_0184s0040 29.387 473 283 13 14 451 20 476 1.13e-44 163
MS.gene035688.t1 MTR_0078s0190 29.387 473 283 13 14 451 20 476 1.13e-44 163
MS.gene035688.t1 MTR_6g013920 31.250 368 210 10 121 455 121 478 3.99e-44 161
MS.gene035688.t1 MTR_3g049970 27.637 474 295 11 14 453 8 467 5.18e-44 161
MS.gene035688.t1 MTR_4g094220 25.523 478 311 12 13 452 5 475 5.76e-44 160
MS.gene035688.t1 MTR_6g038230 27.719 469 290 16 15 457 11 456 7.25e-44 160
MS.gene035688.t1 MTR_6g011340 30.469 384 238 9 98 455 99 479 8.42e-44 160
MS.gene035688.t1 MTR_6g038200 27.489 462 290 16 15 452 11 451 9.27e-44 160
MS.gene035688.t1 MTR_6g014187 27.216 485 294 15 15 455 10 479 1.24e-43 160
MS.gene035688.t1 MTR_6g013960 26.514 479 305 12 15 455 10 479 1.26e-43 160
MS.gene035688.t1 MTR_3g008010 26.752 471 308 11 15 453 10 475 1.31e-43 160
MS.gene035688.t1 MTR_8g059425 26.947 475 306 9 15 455 10 477 1.52e-43 160
MS.gene035688.t1 MTR_6g014170 27.061 473 292 11 15 455 10 461 2.14e-43 159
MS.gene035688.t1 MTR_2g008210 27.215 474 304 12 15 455 11 476 3.79e-43 159
MS.gene035688.t1 MTR_8g006260 27.651 481 287 15 13 451 4 465 5.35e-43 158
MS.gene035688.t1 MTR_8g088560 27.176 471 300 14 7 452 2 454 1.33e-42 157
MS.gene035688.t1 MTR_4g064987 27.813 471 295 15 10 457 3 451 1.39e-42 156
MS.gene035688.t1 MTR_6g038220 27.015 459 295 14 15 452 11 450 1.88e-42 156
MS.gene035688.t1 MTR_6g014310 28.361 476 300 12 15 455 11 480 1.89e-42 157
MS.gene035688.t1 MTR_8g066610 28.247 485 294 14 14 457 8 479 2.47e-42 156
MS.gene035688.t1 MTR_6g014020 27.406 478 302 12 15 455 10 479 8.66e-42 155
MS.gene035688.t1 MTR_8g009067 33.043 345 198 11 135 452 5 343 1.07e-41 152
MS.gene035688.t1 MTR_8g027885 25.764 458 302 10 16 447 19 464 1.20e-41 154
MS.gene035688.t1 MTR_4g064987 27.966 472 287 16 10 457 3 445 1.30e-41 154
MS.gene035688.t1 MTR_5g058320 26.271 472 300 12 15 455 10 464 1.33e-41 154
MS.gene035688.t1 MTR_0184s0030 26.350 463 298 12 14 444 5 456 1.57e-41 154
MS.gene035688.t1 MTR_6g014290 26.151 478 306 13 15 455 10 477 1.86e-41 154
MS.gene035688.t1 MTR_8g465670 28.452 478 291 15 12 452 4 467 2.30e-41 154
MS.gene035688.t1 MTR_6g014270 26.891 476 309 12 15 455 7 478 3.70e-41 153
MS.gene035688.t1 MTR_8g009067 33.056 360 202 10 123 452 111 461 3.96e-41 153
MS.gene035688.t1 MTR_1g107375 25.486 463 304 8 14 453 7 451 4.95e-41 152
MS.gene035688.t1 MTR_6g014150 25.833 480 313 10 12 455 4 476 1.18e-40 152
MS.gene035688.t1 MTR_2g009740 29.938 324 156 6 25 343 21 278 1.23e-40 147
MS.gene035688.t1 MTR_6g013990 30.933 375 220 11 111 455 112 477 1.29e-40 152
MS.gene035688.t1 MTR_8g012650 27.521 476 286 15 15 448 6 464 2.18e-40 151
MS.gene035688.t1 MTR_1g107380 26.395 466 310 14 13 452 11 469 2.41e-40 151
MS.gene035688.t1 MTR_8g012635 27.862 463 293 12 15 444 6 460 2.78e-40 150
MS.gene035688.t1 MTR_1g107315 25.957 470 314 9 15 457 8 470 2.83e-40 150
MS.gene035688.t1 MTR_1g107365 25.636 472 293 9 14 453 44 489 6.09e-40 150
MS.gene035688.t1 MTR_3g479470 26.305 479 305 14 12 453 10 477 6.20e-40 150
MS.gene035688.t1 MTR_7g080940 25.000 472 298 14 13 457 9 451 8.90e-40 149
MS.gene035688.t1 MTR_1g107360 25.210 476 308 10 10 455 4 461 9.56e-40 149
MS.gene035688.t1 MTR_8g009073 28.469 418 254 13 62 451 60 460 1.14e-39 149
MS.gene035688.t1 MTR_1g032490 26.294 483 292 12 13 453 8 468 1.26e-39 149
MS.gene035688.t1 MTR_7g080935 26.722 479 293 15 7 457 3 451 2.03e-39 148
MS.gene035688.t1 MTR_8g083280 25.217 460 312 12 16 452 8 458 7.36e-39 147
MS.gene035688.t1 MTR_8g009073 32.550 298 167 9 182 451 40 331 8.88e-39 143
MS.gene035688.t1 MTR_6g023665 29.839 372 228 10 104 451 105 467 1.41e-38 146
MS.gene035688.t1 MTR_6g033725 33.564 289 168 8 182 451 174 457 1.52e-38 146
MS.gene035688.t1 MTR_6g488280 31.010 416 216 15 79 451 73 460 1.84e-38 145
MS.gene035688.t1 MTR_0428s0010 31.010 416 216 15 79 451 73 460 1.84e-38 145
MS.gene035688.t1 MTR_7g013220 26.872 454 305 13 15 452 5 447 1.93e-38 145
MS.gene035688.t1 MTR_8g009055 27.789 475 289 16 14 451 5 462 2.43e-38 145
MS.gene035688.t1 MTR_6g014200 27.254 477 304 11 15 455 7 476 3.47e-38 145
MS.gene035688.t1 MTR_8g006270 29.947 374 224 12 109 452 95 460 3.89e-38 144
MS.gene035688.t1 MTR_6g014300 26.582 474 305 12 10 455 7 465 4.90e-38 144
MS.gene035688.t1 MTR_6g005600 27.637 474 282 16 13 445 4 457 5.58e-38 144
MS.gene035688.t1 MTR_0078s0060 27.813 471 293 14 14 451 5 461 8.63e-38 144
MS.gene035688.t1 MTR_6g014050 30.976 297 187 6 175 455 186 480 1.62e-37 143
MS.gene035688.t1 MTR_8g009050 28.601 479 284 19 12 451 3 462 2.43e-37 142
MS.gene035688.t1 MTR_8g006730 26.271 472 304 13 12 451 3 462 5.33e-37 141
MS.gene035688.t1 MTR_8g006220 28.337 487 289 16 12 452 3 475 9.70e-37 141
MS.gene035688.t1 MTR_7g070810 27.459 488 300 12 10 457 4 477 1.13e-36 141
MS.gene035688.t1 MTR_8g008990 27.593 482 283 20 14 451 5 464 1.21e-36 140
MS.gene035688.t1 MTR_5g087620 27.108 498 292 19 15 455 10 493 1.43e-36 140
MS.gene035688.t1 MTR_3g479610 29.333 300 186 6 178 455 17 312 1.59e-36 137
MS.gene035688.t1 MTR_4g485620 27.586 464 283 14 29 453 3 452 3.86e-36 139
MS.gene035688.t1 MTR_4g095008 24.569 464 313 10 14 452 10 461 6.37e-36 139
MS.gene035688.t1 MTR_6g014240 25.319 470 298 9 12 455 4 446 7.45e-36 138
MS.gene035688.t1 MTR_6g033625 29.014 355 227 9 120 454 114 463 1.06e-35 138
MS.gene035688.t1 MTR_3g084530 25.314 478 303 14 15 452 6 469 1.12e-35 138
MS.gene035688.t1 MTR_4g117960 29.000 500 277 22 7 452 2 477 1.33e-35 138
MS.gene035688.t1 MTR_7g013200 25.000 460 295 13 15 452 5 436 1.82e-35 137
MS.gene035688.t1 MTR_3g009510 26.601 406 232 11 96 453 87 474 2.24e-35 137
MS.gene035688.t1 MTR_8g027870 24.176 455 307 10 16 444 19 461 2.65e-35 137
MS.gene035688.t1 MTR_6g033675 31.077 325 200 8 147 451 140 460 3.08e-35 137
MS.gene035688.t1 MTR_5g031840 27.484 473 307 16 11 457 1 463 3.08e-35 136
MS.gene035688.t1 MTR_1g019510 27.623 467 297 15 14 451 5 459 3.53e-35 136
MS.gene035688.t1 MTR_5g031860 25.895 475 305 17 15 457 12 471 4.41e-35 136
MS.gene035688.t1 MTR_0891s0010 29.167 288 184 4 187 455 3 289 5.39e-35 132
MS.gene035688.t1 MTR_8g007585 38.660 194 114 2 266 455 199 391 1.23e-34 133
MS.gene035688.t1 MTR_5g031830 25.738 474 308 16 15 457 12 472 1.27e-34 135
MS.gene035688.t1 MTR_3g084520 25.052 479 303 15 15 452 6 469 1.80e-34 134
MS.gene035688.t1 MTR_6g033660 28.000 350 230 6 120 451 114 459 1.99e-34 134
MS.gene035688.t1 MTR_1g107285 25.319 470 306 13 14 453 7 461 2.09e-34 134
MS.gene035688.t1 MTR_8g064880 23.640 478 323 10 14 457 8 477 2.38e-34 134
MS.gene035688.t1 MTR_5g019580 25.726 482 309 12 12 453 4 476 2.49e-34 134
MS.gene035688.t1 MTR_8g009063 28.502 414 249 12 68 451 73 469 2.92e-34 134
MS.gene035688.t1 MTR_6g014190 30.830 253 159 4 218 455 35 286 4.66e-34 129
MS.gene035688.t1 MTR_7g102560 26.749 486 300 17 13 453 7 481 6.73e-34 133
MS.gene035688.t1 MTR_0477s0010 34.783 207 130 2 253 455 111 316 6.94e-34 130
MS.gene035688.t1 MTR_8g008970 30.532 357 211 10 124 451 112 460 7.48e-34 135
MS.gene035688.t1 MTR_8g008970 34.579 214 125 6 248 451 576 784 1.96e-28 119
MS.gene035688.t1 MTR_7g117170 25.979 485 311 14 1 451 1 471 7.69e-34 133
MS.gene035688.t1 MTR_8g064870 23.840 474 315 13 14 453 10 471 9.67e-34 132
MS.gene035688.t1 MTR_4g094920 24.406 463 317 8 13 452 24 476 1.13e-33 132
MS.gene035688.t1 MTR_7g070610 27.383 493 295 16 13 457 11 488 1.94e-33 132
MS.gene035688.t1 MTR_7g102460 27.572 486 297 15 13 453 7 482 2.03e-33 132
MS.gene035688.t1 MTR_1g019520 34.615 208 112 4 266 451 3 208 2.61e-33 125
MS.gene035688.t1 MTR_7g070740 27.902 491 294 18 13 457 9 485 2.70e-33 131
MS.gene035688.t1 MTR_7g013260 25.664 452 302 15 15 452 6 437 3.63e-33 130
MS.gene035688.t1 MTR_7g102490 27.049 488 299 17 13 453 7 484 5.09e-33 131
MS.gene035688.t1 MTR_4g031800 28.367 490 282 18 14 457 8 474 5.28e-33 130
MS.gene035688.t1 MTR_7g071040 27.383 493 295 16 13 457 15 492 5.94e-33 130
MS.gene035688.t1 MTR_7g013240 25.330 454 300 17 15 452 6 436 1.04e-32 129
MS.gene035688.t1 MTR_5g040030 26.494 502 302 17 7 457 4 489 1.35e-32 129
MS.gene035688.t1 MTR_8g006710 28.272 382 234 11 99 451 91 461 1.57e-32 129
MS.gene035688.t1 MTR_7g013180 24.622 463 293 14 15 448 5 440 1.62e-32 129
MS.gene035688.t1 MTR_2g035040 30.623 369 208 14 123 452 24 383 1.95e-32 127
MS.gene035688.t1 MTR_3g084540 24.583 480 305 14 15 452 6 470 2.46e-32 129
MS.gene035688.t1 MTR_5g019580 32.624 282 153 7 209 453 219 500 2.84e-32 129
MS.gene035688.t1 MTR_8g012730 31.090 312 156 10 164 443 12 296 3.16e-32 125
MS.gene035688.t1 MTR_7g117405 28.694 467 283 18 26 453 23 478 3.19e-32 128
MS.gene035688.t1 MTR_6g033615 27.100 369 236 9 105 454 95 449 3.44e-32 128
MS.gene035688.t1 MTR_1g062380 25.755 497 304 13 8 453 9 491 3.45e-32 128
MS.gene035688.t1 MTR_0536s0010 27.872 470 268 18 26 452 32 473 3.71e-32 128
MS.gene035688.t1 MTR_4g117980 26.411 496 296 17 7 452 2 478 3.84e-32 128
MS.gene035688.t1 MTR_7g055710 27.016 496 282 18 13 452 9 480 4.52e-32 128
MS.gene035688.t1 MTR_7g070660 27.812 489 293 19 13 457 9 481 4.64e-32 128
MS.gene035688.t1 MTR_8g044140 26.998 463 264 14 49 457 8 450 8.32e-32 127
MS.gene035688.t1 MTR_7g012120 26.680 491 294 18 9 452 9 480 1.12e-31 127
MS.gene035688.t1 MTR_0009s0240 26.797 459 309 14 13 452 5 455 1.39e-31 126
MS.gene035688.t1 MTR_5g045970 26.316 494 306 16 7 453 8 490 2.27e-31 126
MS.gene035688.t1 MTR_8g012630 36.946 203 105 4 266 445 203 405 2.75e-31 124
MS.gene035688.t1 MTR_7g046490 33.190 232 125 6 248 454 236 462 2.95e-31 125
MS.gene035688.t1 MTR_4g117950 28.602 472 263 18 26 452 17 459 3.23e-31 125
MS.gene035688.t1 MTR_7g070940 27.386 482 301 16 12 457 6 474 3.66e-31 125
MS.gene035688.t1 MTR_8g068330 35.385 195 115 5 264 448 263 456 7.09e-31 124
MS.gene035688.t1 MTR_7g070860 25.703 498 271 15 12 452 4 459 8.27e-31 124
MS.gene035688.t1 MTR_8g466240 33.333 252 151 6 219 453 200 451 8.92e-31 124
MS.gene035688.t1 MTR_8g068360 39.474 190 104 5 269 448 271 459 9.45e-31 124
MS.gene035688.t1 MTR_4g485640 28.065 367 224 10 124 457 309 668 1.26e-30 125
MS.gene035688.t1 MTR_7g102550 27.495 491 288 18 15 453 9 483 1.38e-30 124
MS.gene035688.t1 MTR_8g043470 28.613 346 208 9 121 452 54 374 1.57e-30 122
MS.gene035688.t1 MTR_6g035265 25.820 488 270 19 26 456 22 474 1.61e-30 123
MS.gene035688.t1 MTR_7g070800 26.326 509 276 17 13 457 4 477 2.67e-30 123
MS.gene035688.t1 MTR_6g035185 26.796 515 271 20 7 452 2 479 2.83e-30 123
MS.gene035688.t1 MTR_7g070780 26.305 498 291 19 14 457 10 485 4.54e-30 122
MS.gene035688.t1 MTR_6g035295 25.203 492 304 16 14 457 11 486 6.93e-30 122
MS.gene035688.t1 MTR_5g029800 26.978 493 293 18 7 452 2 474 7.20e-30 122
MS.gene035688.t1 MTR_7g102450 31.200 375 200 15 123 453 109 469 7.47e-30 121
MS.gene035688.t1 MTR_7g067330 26.697 442 258 15 12 430 6 404 7.97e-30 120
MS.gene035688.t1 MTR_5g090580 25.255 491 304 17 11 455 1 474 8.79e-30 121
MS.gene035688.t1 MTR_4g024020 26.829 492 296 18 13 453 7 485 8.98e-30 121
MS.gene035688.t1 MTR_2g034990 29.380 371 212 13 123 453 119 479 1.13e-29 121
MS.gene035688.t1 MTR_2g035020 27.767 497 288 20 7 452 2 478 2.28e-29 120
MS.gene035688.t1 MTR_1g040310 26.884 491 293 16 14 457 14 485 2.63e-29 120
MS.gene035688.t1 MTR_7g070910 26.369 493 300 17 13 457 9 486 3.79e-29 119
MS.gene035688.t1 MTR_7g070930 27.033 492 298 16 13 457 12 489 4.05e-29 119
MS.gene035688.t1 MTR_4g008630 25.657 495 288 18 6 456 5 463 4.36e-29 119
MS.gene035688.t1 MTR_4g117890 29.801 302 167 9 193 452 173 471 5.71e-29 119
MS.gene035688.t1 MTR_8g068340 37.056 197 113 5 269 455 272 467 6.25e-29 119
MS.gene035688.t1 MTR_1g029540 32.751 229 134 5 248 456 232 460 7.69e-29 118
MS.gene035688.t1 MTR_5g016480 32.673 202 127 2 263 455 269 470 8.22e-29 118
MS.gene035688.t1 MTR_7g071050 26.439 469 269 16 1 439 1 423 2.39e-28 116
MS.gene035688.t1 MTR_8g074550 24.187 492 311 15 15 455 8 488 2.95e-28 117
MS.gene035688.t1 MTR_0536s0020 30.147 272 153 8 218 452 205 476 3.26e-28 117
MS.gene035688.t1 MTR_5g090700 25.532 423 252 14 81 455 69 476 4.32e-28 116
MS.gene035688.t1 MTR_5g090620 22.793 487 326 15 11 457 1 477 4.89e-28 116
MS.gene035688.t1 MTR_4g108250 34.842 221 124 5 257 457 269 489 4.94e-28 116
MS.gene035688.t1 MTR_5g067170 26.653 484 304 16 9 452 4 476 5.83e-28 116
MS.gene035688.t1 MTR_8g090095 32.243 214 125 3 263 456 267 480 6.21e-28 116
MS.gene035688.t1 MTR_8g032950 25.859 495 298 17 7 452 3 477 8.30e-28 115
MS.gene035688.t1 MTR_8g071070 28.808 302 196 8 171 455 169 468 9.75e-28 115
MS.gene035688.t1 MTR_5g098960 31.970 269 160 9 149 398 130 394 1.11e-27 115
MS.gene035688.t1 MTR_5g090670 23.881 402 251 12 98 455 86 476 1.51e-27 115
MS.gene035688.t1 MTR_5g016660 24.435 487 317 12 13 457 8 485 2.25e-27 114
MS.gene035688.t1 MTR_4g118000 26.305 498 277 21 8 452 3 463 2.66e-27 114
MS.gene035688.t1 MTR_5g004940 31.606 193 112 2 266 452 196 374 2.82e-27 113
MS.gene035688.t1 MTR_2086s0010 36.774 155 90 3 307 455 19 171 4.10e-27 107
MS.gene035688.t1 MTR_1996s0010 36.774 155 90 3 307 455 19 171 4.10e-27 107
MS.gene035688.t1 MTR_2g059240 24.625 467 311 11 15 453 13 466 4.96e-27 113
MS.gene035688.t1 MTR_5g039900 25.052 483 304 15 14 452 12 480 5.29e-27 113
MS.gene035688.t1 MTR_2g098430 25.751 466 289 17 17 439 6 457 5.88e-27 113
MS.gene035688.t1 MTR_5g090630 24.066 482 312 17 11 455 1 465 7.77e-27 112
MS.gene035688.t1 MTR_3g009490 33.696 184 99 3 293 453 3 186 8.32e-27 107
MS.gene035688.t1 MTR_5g072860 21.730 474 306 13 15 452 18 462 1.48e-26 112
MS.gene035688.t1 MTR_7g067120 25.792 442 258 16 10 426 4 400 2.02e-26 111
MS.gene035688.t1 MTR_2g008226 38.542 192 103 5 248 425 250 440 2.07e-26 111
MS.gene035688.t1 MTR_4g485590 27.273 407 238 11 15 397 9 381 2.71e-26 110
MS.gene035688.t1 MTR_5g098930 25.381 394 251 12 99 455 80 467 3.45e-26 110
MS.gene035688.t1 MTR_5g072830 23.517 472 301 15 15 457 10 450 6.99e-26 109
MS.gene035688.t1 MTR_7g102520 26.052 499 295 20 14 457 11 490 7.97e-26 110
MS.gene035688.t1 MTR_5g090660 26.076 395 248 14 98 455 85 472 9.95e-26 110
MS.gene035688.t1 MTR_5g070090 28.517 263 169 8 210 456 203 462 1.45e-25 108
MS.gene035688.t1 MTR_5g072810 22.338 479 319 15 4 457 5 455 2.77e-25 108
MS.gene035688.t1 MTR_4g123553 38.182 165 94 4 268 425 268 431 3.88e-25 107
MS.gene035688.t1 MTR_4g079270 26.327 452 277 17 14 432 7 435 5.33e-25 107
MS.gene035688.t1 MTR_7g039550 33.333 234 127 6 248 452 25 258 5.36e-25 104
MS.gene035688.t1 MTR_5g072840 22.484 467 312 12 15 457 10 450 1.05e-24 106
MS.gene035688.t1 MTR_2g046620 38.788 165 93 4 268 425 269 432 1.35e-24 106
MS.gene035688.t1 MTR_4g079250 25.607 453 279 16 14 432 7 435 1.41e-24 106
MS.gene035688.t1 MTR_5g027210 29.119 261 145 7 215 435 206 466 1.49e-24 106
MS.gene035688.t1 MTR_6g042310 25.887 479 243 18 5 424 8 433 2.96e-24 105
MS.gene035688.t1 MTR_5g045960 30.224 268 154 8 219 453 216 483 4.23e-24 105
MS.gene035688.t1 MTR_5g070040 26.150 413 265 14 70 455 67 466 5.53e-24 104
MS.gene035688.t1 MTR_2g046820 25.307 407 262 13 81 456 68 463 6.15e-24 104
MS.gene035688.t1 MTR_3g435310 37.805 164 94 4 268 424 227 389 1.07e-23 103
MS.gene035688.t1 MTR_2g008220 37.647 170 98 4 268 430 272 440 2.02e-23 102
MS.gene035688.t1 MTR_5g066390 35.897 156 95 2 304 455 60 214 2.11e-23 98.2
MS.gene035688.t1 MTR_8g009840 33.161 193 100 5 284 451 333 521 2.48e-23 103
MS.gene035688.t1 MTR_2g040530 25.253 396 246 14 95 456 86 465 2.66e-23 102
MS.gene035688.t1 MTR_6g014185 29.389 262 142 8 204 455 116 344 2.77e-23 101
MS.gene035688.t1 MTR_1g090270 33.962 212 121 7 238 432 233 442 3.22e-23 102
MS.gene035688.t1 MTR_4g077960 37.805 164 94 4 268 424 245 407 3.28e-23 102
MS.gene035688.t1 MTR_7g470610 40.845 142 77 3 263 397 128 269 3.81e-23 99.4
MS.gene035688.t1 MTR_7g070583 40.845 142 77 3 263 397 128 269 3.81e-23 99.4
MS.gene035688.t1 MTR_2g083430 27.021 433 281 17 14 425 7 425 6.05e-23 101
MS.gene035688.t1 MTR_7g070870 26.316 475 291 17 12 457 16 460 8.78e-23 100
MS.gene035688.t1 MTR_2g008225 36.686 169 101 3 268 430 273 441 9.47e-23 100
MS.gene035688.t1 MTR_5g090600 23.604 394 275 10 81 455 67 453 1.48e-22 100
MS.gene035688.t1 MTR_5g072820 22.601 469 309 17 15 457 10 450 1.70e-22 100
MS.gene035688.t1 MTR_5g090610 26.471 272 166 7 216 455 191 460 2.89e-22 99.4
MS.gene035688.t1 MTR_3g031450 20.905 464 310 13 15 453 18 449 7.44e-22 98.2
MS.gene035688.t1 MTR_8g007565 32.836 201 117 5 243 426 237 436 1.59e-21 97.4
MS.gene035688.t1 MTR_6g013680 25.789 380 209 11 98 455 46 374 1.62e-21 96.3
MS.gene035688.t1 MTR_4g082820 28.623 276 166 9 205 453 190 461 1.64e-21 97.1
MS.gene035688.t1 MTR_3g031400 21.212 462 309 14 15 453 18 447 2.29e-21 96.7
MS.gene035688.t1 MTR_8g007650 32.836 201 117 5 243 426 237 436 2.54e-21 96.7
MS.gene035688.t1 MTR_6g014160 27.832 309 160 12 109 388 92 366 2.58e-21 95.9
MS.gene035688.t1 MTR_7g080960 30.500 200 91 5 258 457 318 469 3.61e-21 96.3
MS.gene035688.t1 MTR_4g059370 29.583 240 152 5 209 432 131 369 7.10e-21 94.7
MS.gene035688.t1 MTR_2g046750 29.469 207 125 4 269 456 262 466 7.27e-21 95.1
MS.gene035688.t1 MTR_6g036650 36.066 183 105 5 269 439 279 461 1.31e-20 94.4
MS.gene035688.t1 MTR_5g066410 31.718 227 125 7 234 434 195 417 1.48e-20 94.0
MS.gene035688.t1 MTR_6g014186 22.013 477 291 13 15 455 7 438 3.61e-20 92.8
MS.gene035688.t1 MTR_2g014900 24.706 425 287 14 14 418 6 417 4.12e-20 92.8
MS.gene035688.t1 MTR_2g083480 27.115 461 289 20 14 450 7 444 7.61e-20 92.0
MS.gene035688.t1 MTR_1g107325 34.091 132 82 1 327 453 219 350 1.14e-19 90.5
MS.gene035688.t1 MTR_2g083420 23.841 453 261 18 14 431 7 410 3.45e-19 90.1
MS.gene035688.t1 MTR_6g014000 37.956 137 80 2 317 453 22 153 3.72e-19 90.1
MS.gene035688.t1 MTR_6g078320 26.829 287 180 8 182 443 186 467 3.38e-18 87.4
MS.gene035688.t1 MTR_2g083390 30.631 222 124 7 219 431 210 410 3.84e-18 86.7
MS.gene035688.t1 MTR_5g075440 20.367 491 312 16 7 455 2 455 1.07e-17 85.5
MS.gene035688.t1 MTR_7g070995 34.884 129 71 2 337 452 13 141 1.12e-17 80.5
MS.gene035688.t1 MTR_4g082810 28.788 264 158 10 154 393 145 402 1.17e-17 85.1
MS.gene035688.t1 MTR_2g083380 25.459 436 284 18 14 425 24 442 2.11e-17 84.7
MS.gene035688.t1 MTR_0536s0030 31.210 157 92 4 317 457 197 353 8.15e-17 82.0
MS.gene035688.t1 MTR_1g090280 33.333 156 88 4 293 432 137 292 4.49e-16 79.3
MS.gene035688.t1 MTR_5g072850 24.569 232 157 6 165 387 103 325 1.35e-14 75.5
MS.gene035688.t1 MTR_7g070760 34.351 131 67 2 267 397 90 201 2.25e-14 72.4
MS.gene035688.t1 MTR_8g056740 27.111 225 149 6 218 428 110 333 8.53e-14 73.2
MS.gene035688.t1 MTR_5g090690 23.476 328 184 13 71 365 12 305 4.32e-13 70.9
MS.gene035688.t1 MTR_6g013890 22.814 263 132 8 175 421 33 240 1.28e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035688.t1 AT5G17050 49.554 448 220 4 15 457 12 458 1.35e-158 457
MS.gene035688.t1 AT1G30530 45.475 442 231 6 15 452 12 447 1.58e-135 398
MS.gene035688.t1 AT5G17030 42.572 451 246 6 15 457 12 457 1.41e-129 383
MS.gene035688.t1 AT5G17040 42.953 447 237 6 15 455 5 439 1.61e-126 374
MS.gene035688.t1 AT5G17040 43.182 308 170 3 153 455 30 337 1.31e-83 261
MS.gene035688.t1 AT5G59580 27.790 457 305 10 7 452 2 444 2.67e-58 198
MS.gene035688.t1 AT5G59590 27.948 458 305 10 7 452 2 446 1.12e-57 197
MS.gene035688.t1 AT3G46680 28.913 460 295 12 12 455 6 449 1.98e-52 183
MS.gene035688.t1 AT1G22400 28.211 475 305 11 10 452 8 478 5.13e-52 182
MS.gene035688.t1 AT3G46660 26.915 457 311 8 13 457 12 457 1.01e-51 181
MS.gene035688.t1 AT3G46670 27.778 450 300 11 15 452 9 445 2.53e-51 180
MS.gene035688.t1 AT3G46700 26.696 457 304 11 10 453 4 442 7.60e-51 179
MS.gene035688.t1 AT1G22360 27.521 476 308 11 12 455 7 477 7.91e-50 177
MS.gene035688.t1 AT3G46690 27.015 459 313 8 10 457 4 451 8.86e-50 176
MS.gene035688.t1 AT5G05880 27.897 466 292 13 14 457 7 450 2.42e-48 172
MS.gene035688.t1 AT1G22380 27.423 485 301 12 10 455 8 480 3.52e-48 172
MS.gene035688.t1 AT3G11340 27.632 456 297 11 16 457 10 446 1.62e-47 170
MS.gene035688.t1 AT2G31790 26.652 469 298 14 15 456 8 457 3.62e-47 169
MS.gene035688.t1 AT1G22360 27.101 476 298 11 12 455 7 465 4.80e-47 169
MS.gene035688.t1 AT3G46650 26.351 444 290 9 13 447 8 423 2.04e-46 166
MS.gene035688.t1 AT3G46720 26.222 450 309 9 10 452 4 437 3.38e-46 166
MS.gene035688.t1 AT1G05675 27.409 467 291 14 15 454 6 451 6.89e-46 165
MS.gene035688.t1 AT1G78270 28.243 478 306 14 12 457 10 482 3.30e-45 164
MS.gene035688.t1 AT1G22340 26.971 482 308 11 10 455 8 481 4.99e-45 164
MS.gene035688.t1 AT1G05680 26.882 465 296 13 15 454 6 451 9.13e-45 162
MS.gene035688.t1 AT2G43820 27.941 476 282 17 12 457 4 448 1.90e-44 161
MS.gene035688.t1 AT5G05860 27.938 451 297 11 14 451 8 443 1.91e-43 159
MS.gene035688.t1 AT5G38040 26.802 444 292 11 26 453 21 447 7.30e-43 157
MS.gene035688.t1 AT3G55700 29.708 377 246 9 95 457 81 452 1.71e-42 156
MS.gene035688.t1 AT2G36970 25.157 477 321 13 7 455 2 470 2.17e-41 154
MS.gene035688.t1 AT2G36770 28.690 481 295 17 14 453 13 486 9.57e-41 152
MS.gene035688.t1 AT5G05890 26.124 467 303 15 14 457 7 454 1.37e-40 151
MS.gene035688.t1 AT5G05870 25.813 461 310 12 15 456 8 455 1.96e-40 151
MS.gene035688.t1 AT5G38010 25.586 469 312 12 7 455 2 453 2.14e-40 150
MS.gene035688.t1 AT5G05900 26.509 464 298 13 14 456 7 448 3.08e-40 150
MS.gene035688.t1 AT1G22370 27.254 477 303 14 12 455 10 475 4.38e-40 150
MS.gene035688.t1 AT2G31750 25.966 466 310 14 13 457 6 457 6.27e-40 150
MS.gene035688.t1 AT5G66690 28.690 481 267 16 9 442 1 452 6.76e-40 150
MS.gene035688.t1 AT2G26480 25.380 461 309 12 11 455 4 445 8.08e-40 149
MS.gene035688.t1 AT2G31750 25.862 464 309 14 13 455 6 455 8.72e-40 149
MS.gene035688.t1 AT2G15490 29.339 484 294 14 9 453 1 475 1.60e-39 149
MS.gene035688.t1 AT2G15480 28.392 479 299 12 12 453 7 478 4.72e-39 147
MS.gene035688.t1 AT2G36780 28.690 481 295 16 14 453 13 486 6.94e-39 147
MS.gene035688.t1 AT2G15490 29.158 487 294 14 9 453 1 478 9.91e-39 146
MS.gene035688.t1 AT2G43840 26.327 471 284 14 13 452 5 443 1.96e-38 145
MS.gene035688.t1 AT5G26310 28.051 467 288 14 9 442 1 452 3.93e-38 145
MS.gene035688.t1 AT2G15480 27.607 489 300 12 12 453 7 488 7.63e-38 144
MS.gene035688.t1 AT4G34131 27.536 483 303 14 13 457 8 481 9.28e-38 144
MS.gene035688.t1 AT2G43840 26.115 471 285 14 13 452 5 443 1.98e-37 142
MS.gene035688.t1 AT3G50740 29.289 478 285 15 9 447 1 464 2.51e-37 142
MS.gene035688.t1 AT1G01420 27.195 467 294 15 15 449 8 460 2.76e-37 142
MS.gene035688.t1 AT1G01420 27.195 467 294 15 15 449 11 463 2.87e-37 142
MS.gene035688.t1 AT2G36760 28.067 481 298 15 14 453 13 486 3.74e-37 142
MS.gene035688.t1 AT2G23250 27.293 458 284 14 18 452 1 432 4.86e-37 141
MS.gene035688.t1 AT2G23260 25.427 468 306 14 12 456 7 454 7.65e-37 140
MS.gene035688.t1 AT3G16520 27.920 351 231 8 120 453 112 457 7.96e-37 141
MS.gene035688.t1 AT4G01070 28.033 478 271 18 15 446 8 458 1.38e-36 140
MS.gene035688.t1 AT3G53160 26.556 482 304 15 14 453 7 480 4.94e-36 139
MS.gene035688.t1 AT3G55710 26.282 468 301 13 15 457 8 456 7.36e-36 138
MS.gene035688.t1 AT4G36770 40.102 197 97 3 263 438 250 446 2.20e-35 137
MS.gene035688.t1 AT4G15550 26.226 469 304 16 15 452 13 470 3.82e-35 136
MS.gene035688.t1 AT1G05530 24.786 468 303 14 15 453 5 452 4.11e-35 136
MS.gene035688.t1 AT1G24100 24.843 479 287 14 15 453 11 456 9.30e-35 135
MS.gene035688.t1 AT2G28080 26.374 455 291 15 19 445 22 460 1.07e-34 135
MS.gene035688.t1 AT3G16520 27.326 344 228 8 120 446 112 450 1.64e-34 134
MS.gene035688.t1 AT3G16520 28.012 332 217 8 120 434 112 438 1.65e-34 134
MS.gene035688.t1 AT3G02100 25.253 495 294 16 4 457 2 461 2.47e-34 134
MS.gene035688.t1 AT2G36750 28.423 482 294 16 14 453 9 481 4.17e-34 134
MS.gene035688.t1 AT2G36800 27.789 493 299 19 7 453 4 485 4.33e-34 134
MS.gene035688.t1 AT2G30140 26.068 468 316 13 4 457 2 453 5.76e-34 133
MS.gene035688.t1 AT2G30140 25.696 467 318 12 4 457 2 452 1.29e-33 132
MS.gene035688.t1 AT1G05560 24.893 466 302 15 15 453 5 449 1.31e-33 132
MS.gene035688.t1 AT1G01390 30.508 295 180 6 182 452 171 464 1.56e-33 132
MS.gene035688.t1 AT1G05560 24.893 466 302 15 15 453 55 499 1.99e-33 132
MS.gene035688.t1 AT1G01390 30.928 291 176 6 182 448 188 477 2.07e-33 132
MS.gene035688.t1 AT2G30150 26.419 458 304 15 15 456 13 453 2.29e-32 128
MS.gene035688.t1 AT2G36790 27.347 490 290 13 14 453 12 485 3.20e-32 128
MS.gene035688.t1 AT1G73880 26.327 471 307 15 13 457 12 468 2.16e-31 126
MS.gene035688.t1 AT4G15490 26.582 474 303 15 15 456 8 468 2.45e-31 125
MS.gene035688.t1 AT4G14090 27.371 464 291 18 13 452 11 452 2.53e-31 125
MS.gene035688.t1 AT1G07240 28.758 306 187 10 165 444 164 464 3.38e-31 125
MS.gene035688.t1 AT2G30150 26.211 454 302 15 19 456 1 437 7.38e-31 124
MS.gene035688.t1 AT4G34135 25.726 482 314 12 13 457 9 483 1.09e-30 124
MS.gene035688.t1 AT3G22250 33.778 225 132 6 234 446 233 452 1.72e-30 123
MS.gene035688.t1 AT3G53150 25.646 503 303 15 12 455 19 509 2.24e-30 123
MS.gene035688.t1 AT2G22590 37.368 190 108 5 269 448 274 462 6.97e-30 121
MS.gene035688.t1 AT3G21560 23.517 472 315 13 15 453 12 470 9.97e-30 121
MS.gene035688.t1 AT4G34138 26.369 493 306 17 6 456 2 479 1.29e-29 121
MS.gene035688.t1 AT2G16890 26.042 480 305 18 8 453 2 465 1.57e-29 120
MS.gene035688.t1 AT1G07250 29.699 266 162 7 203 445 199 462 3.35e-29 119
MS.gene035688.t1 AT1G22370 29.373 303 187 8 175 455 8 305 7.41e-29 115
MS.gene035688.t1 AT4G15500 25.974 462 307 14 15 452 9 459 2.00e-28 117
MS.gene035688.t1 AT2G18570 26.667 480 281 19 15 448 5 459 3.81e-28 116
MS.gene035688.t1 AT2G29730 23.810 462 312 15 10 444 3 451 5.28e-28 116
MS.gene035688.t1 AT2G29750 27.347 245 162 4 211 439 214 458 1.14e-27 115
MS.gene035688.t1 AT4G15480 24.947 473 308 13 14 453 18 476 2.13e-27 114
MS.gene035688.t1 AT2G18560 26.603 312 199 9 164 448 61 369 6.02e-27 112
MS.gene035688.t1 AT1G07260 30.667 225 137 4 237 444 238 460 7.29e-27 113
MS.gene035688.t1 AT5G65550 24.783 460 311 12 13 448 7 455 1.25e-26 112
MS.gene035688.t1 AT2G29710 22.940 449 319 13 26 452 16 459 1.51e-25 109
MS.gene035688.t1 AT2G29740 27.778 252 162 6 211 444 214 463 1.84e-25 108
MS.gene035688.t1 AT5G14860 31.797 217 137 5 248 453 257 473 2.51e-25 108
MS.gene035688.t1 AT3G21790 26.209 393 244 11 99 456 98 479 3.95e-25 108
MS.gene035688.t1 AT1G10400 24.051 474 315 16 9 452 1 459 4.03e-25 107
MS.gene035688.t1 AT3G21800 27.857 280 169 6 208 456 199 476 4.45e-25 107
MS.gene035688.t1 AT1G06000 33.594 256 142 7 222 452 178 430 1.23e-24 106
MS.gene035688.t1 AT3G21760 28.090 267 159 5 221 456 217 481 1.44e-24 106
MS.gene035688.t1 AT5G03490 35.079 191 117 4 267 453 273 460 1.72e-24 105
MS.gene035688.t1 AT2G16890 25.754 431 271 17 8 405 2 416 1.01e-23 103
MS.gene035688.t1 AT4G15260 29.302 215 124 3 267 455 142 354 1.17e-23 102
MS.gene035688.t1 AT1G51210 39.286 140 81 2 262 400 264 400 4.31e-23 101
MS.gene035688.t1 AT5G53990 26.608 451 293 14 21 455 13 441 7.51e-23 100
MS.gene035688.t1 AT5G49690 32.653 196 116 6 269 457 267 453 9.70e-23 100
MS.gene035688.t1 AT4G15280 21.281 484 328 11 13 455 2 473 1.28e-22 100
MS.gene035688.t1 AT4G15280 21.281 484 328 11 13 455 34 505 1.67e-22 100
MS.gene035688.t1 AT3G21750 27.692 260 153 6 218 444 200 457 4.03e-22 99.0
MS.gene035688.t1 AT5G12890 26.170 470 286 17 15 438 8 462 8.38e-22 98.2
MS.gene035688.t1 AT1G64910 25.546 458 291 18 21 456 13 442 1.79e-21 97.1
MS.gene035688.t1 AT5G54010 24.449 454 309 13 21 457 13 449 2.99e-21 96.3
MS.gene035688.t1 AT5G37950 23.899 318 217 8 69 372 31 337 9.11e-21 93.6
MS.gene035688.t1 AT5G37950 23.750 320 221 8 69 372 31 343 1.54e-20 93.2
MS.gene035688.t1 AT3G21780 29.167 216 124 5 267 456 257 469 2.33e-20 94.0
MS.gene035688.t1 AT4G27570 26.889 450 273 19 14 434 4 426 3.93e-20 92.8
MS.gene035688.t1 AT4G27560 29.333 225 147 5 243 456 225 448 5.99e-19 89.4
MS.gene035688.t1 AT2G22930 24.598 435 278 15 21 433 13 419 1.15e-18 88.6
MS.gene035688.t1 AT4G09500 24.648 426 287 13 21 432 13 418 2.48e-18 87.4
MS.gene035688.t1 AT3G29630 26.949 449 253 21 21 433 13 422 9.67e-18 85.9
MS.gene035688.t1 AT1G64920 23.656 465 293 18 21 455 13 445 1.35e-16 82.4
MS.gene035688.t1 AT5G54060 23.651 482 311 16 12 457 8 468 9.54e-16 79.7
MS.gene035688.t1 AT1G50580 33.019 212 123 9 237 433 213 420 1.46e-15 79.0
MS.gene035688.t1 AT4G09500 32.335 167 102 4 277 432 227 393 3.67e-15 77.8
MS.gene035688.t1 AT3G29630 24.944 445 241 18 21 433 13 396 6.51e-15 77.0

Find 104 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTTATTTGGGTGTTTA+AGG 0.080816 8.4:+5877281 MS.gene035688:CDS
TTCAACAATGTTACACAAAA+TGG 0.096309 8.4:+5876978 MS.gene035688:CDS
TACCAACAGCTGAGTGTTTC+AGG 0.208169 8.4:-5877392 None:intergenic
AATGTGGATGTCCATTTATT+TGG 0.208528 8.4:+5877271 MS.gene035688:CDS
CCCTTAAACACCCAAATAAA+TGG 0.240493 8.4:-5877282 None:intergenic
TTTAACTCATTCTCAATAAG+AGG 0.274886 8.4:-5877057 None:intergenic
TACCGTAGCAAATGAGTTTA+TGG 0.287722 8.4:-5877031 None:intergenic
GGTATGTGTTTGACACATTC+TGG 0.291965 8.4:+5877411 MS.gene035688:CDS
CAAGAATGTTGGAAAGCATT+TGG 0.308337 8.4:+5877514 MS.gene035688:CDS
TTGTGTAACATTGTTGAAAA+TGG 0.311144 8.4:-5876973 None:intergenic
ATGCCAAATGGGTTCCTCTT+TGG 0.313159 8.4:+5876113 MS.gene035688:CDS
AAGACTACATGTGGCCGTTT+TGG 0.319619 8.4:+5875727 MS.gene035688:CDS
AAGAATGTTGGAAAGCATTT+GGG 0.320739 8.4:+5877515 MS.gene035688:CDS
AACATTGCCAAATGGATTTA+CGG 0.336834 8.4:+5877317 MS.gene035688:CDS
CCATTTATTTGGGTGTTTAA+GGG 0.346451 8.4:+5877282 MS.gene035688:CDS
AGGAAGGAAATCAACGGTTT+TGG 0.363053 8.4:-5876890 None:intergenic
CCATTTGGCAATGTTTCCTC+TGG 0.364467 8.4:-5877309 None:intergenic
TGGGTTCCTCTTTGGACTGC+AGG 0.370371 8.4:+5876121 MS.gene035688:CDS
AGGGAAGAACATTACTTGTT+TGG 0.370970 8.4:+5876042 MS.gene035688:CDS
ACATCATAATGCTTTATGTT+AGG 0.379653 8.4:-5875899 None:intergenic
AACTGGATGTCTAGAGATAA+AGG 0.381536 8.4:+5875686 None:intergenic
TCAACAATGTTACACAAAAT+GGG 0.381953 8.4:+5876979 MS.gene035688:CDS
CCAGAAGGTTATGTGCCTTC+AGG 0.382213 8.4:+5875935 MS.gene035688:CDS
CCTGAAGGCACATAACCTTC+TGG 0.399833 8.4:-5875935 None:intergenic
CATGTAATAGCAATTTGAAC+TGG 0.401444 8.4:-5877083 None:intergenic
AAAACCGTTGATTTCCTTCC+TGG 0.403694 8.4:+5876892 MS.gene035688:CDS
TCAATGTTGGATTGCATTGT+TGG 0.406485 8.4:+5877441 MS.gene035688:CDS
GTTCTTTCCGTAAATCCATT+TGG 0.419029 8.4:-5877324 None:intergenic
GATAAAGCTGTCGCAGAGAC+AGG 0.423358 8.4:+5876022 MS.gene035688:CDS
TGTTGCATGGGCTCCTCAAA+TGG 0.426866 8.4:+5877365 MS.gene035688:CDS
CATGCTTCTGATTTGCCTGA+AGG 0.426999 8.4:+5876928 MS.gene035688:CDS
ATGTGGATGTCCATTTATTT+GGG 0.430467 8.4:+5877272 MS.gene035688:CDS
ATTGGTGTGGGTGTTGACAA+TGG 0.433916 8.4:+5877540 MS.gene035688:CDS
ATATCACCTATCACTCCTTC+AGG 0.436131 8.4:-5876943 None:intergenic
TTCAAAGCTGTTGAACGAAA+TGG 0.439862 8.4:+5877666 MS.gene035688:CDS
CTAAGGAAATGCATGCCAAA+TGG 0.440729 8.4:+5876101 MS.gene035688:CDS
AGAGAACTATAAGAGTGTTA+TGG 0.452944 8.4:+5876000 MS.gene035688:CDS
TCAGTTGTGTATATTAGCTT+CGG 0.454548 8.4:+5877192 MS.gene035688:CDS
ATAACACTCTTATAGTTCTC+TGG 0.454643 8.4:-5875998 None:intergenic
AAAAGGAAAATTTGTTGCAT+GGG 0.461314 8.4:+5877353 MS.gene035688:CDS
CAAAAGGAAAATTTGTTGCA+TGG 0.462627 8.4:+5877352 MS.gene035688:CDS
AAGCATTATGATGTTCATGA+TGG 0.477948 8.4:+5875908 MS.gene035688:CDS
TTCCCATTTGGAACACATGC+AGG 0.479012 8.4:+5875752 MS.gene035688:CDS
TAAGGAAATGCATGCCAAAT+GGG 0.481182 8.4:+5876102 MS.gene035688:CDS
GATCTTATCAGAGAAAAGAT+AGG 0.486912 8.4:+5876175 MS.gene035688:CDS
TGGCATGCATTTCCTTAGCT+AGG 0.488282 8.4:-5876096 None:intergenic
AGTCCAAAGAGGAACCCATT+TGG 0.494298 8.4:-5876116 None:intergenic
CAATCCTTCTTGCAAGGCTA+AGG 0.495064 8.4:-5875781 None:intergenic
GATCTGTGAAAACATGTGTA+AGG 0.496696 8.4:-5876156 None:intergenic
GATTTGCCTGAAGGAGTGAT+AGG 0.498528 8.4:+5876937 MS.gene035688:CDS
GGACCTGCATGTGTTCCAAA+TGG 0.499160 8.4:-5875755 None:intergenic
TTGATAATGTCAACTGAGGA+AGG 0.501860 8.4:+5877600 MS.gene035688:CDS
ACGGAAAGAACGAAAACAAA+AGG 0.504002 8.4:+5877336 MS.gene035688:CDS
GGGTTCCTCTTTGGACTGCA+GGG 0.506293 8.4:+5876122 MS.gene035688:CDS
CATTGTTGGTGGTGTGCCAA+TGG 0.509879 8.4:+5877455 MS.gene035688:CDS
AAATCAGAAGCATGAAGCTC+AGG 0.510832 8.4:-5876919 None:intergenic
AAGGTTGAATGCAAGAATGT+TGG 0.513650 8.4:+5877503 MS.gene035688:CDS
TTCAAATTGCTATTACATGT+TGG 0.519235 8.4:+5877087 MS.gene035688:CDS
CCAGAGGAAACATTGCCAAA+TGG 0.521009 8.4:+5877309 MS.gene035688:CDS
TCCAAATGGGAATGCCAAAA+CGG 0.522073 8.4:-5875741 None:intergenic
TGTTTCAGGATTTCCATTTG+AGG 0.522785 8.4:-5877378 None:intergenic
TGCGGTGTTGTCAAGATGAA+TGG 0.523788 8.4:-5877111 None:intergenic
TTCTGGATGGAACTCAATGT+TGG 0.524494 8.4:+5877428 MS.gene035688:CDS
CTTGACAACACCGCAACGTA+TGG 0.524991 8.4:+5877119 MS.gene035688:CDS
CTGCAGCAATCCTTCTTGCA+AGG 0.526389 8.4:-5875787 None:intergenic
ATGTTGGATTGCATTGTTGG+TGG 0.528949 8.4:+5877444 MS.gene035688:CDS
CACTCCTTAGCCTTGCAAGA+AGG 0.532409 8.4:+5875777 MS.gene035688:CDS
ACCTCGTGAGCTCAATGCAT+TGG 0.533413 8.4:+5877233 MS.gene035688:CDS
GCATGAAGCTCAGGAAAACC+AGG 0.545510 8.4:-5876910 None:intergenic
GGAGTGATAGGTGATATAGA+TGG 0.548644 8.4:+5876949 MS.gene035688:CDS
GTTTGGTGCGGACCTAGCTA+AGG 0.556011 8.4:+5876084 MS.gene035688:CDS
TGCCATAAACTCATTTGCTA+CGG 0.556185 8.4:+5877029 MS.gene035688:CDS
TTAACTCATTCTCAATAAGA+GGG 0.560380 8.4:-5877056 None:intergenic
CAGAGAAAAGATAGGCTCCA+AGG 0.568012 8.4:+5876183 MS.gene035688:CDS
GGTTCAAGTGGGTGTCCTGA+AGG 0.568494 8.4:-5875950 None:intergenic
GACCTGCATGTGTTCCAAAT+GGG 0.575254 8.4:-5875754 None:intergenic
ATCCTGAAACACTCAGCTGT+TGG 0.576637 8.4:+5877390 MS.gene035688:CDS
GCATTGAGCTCACGAGGTGG+TGG 0.577737 8.4:-5877228 None:intergenic
AGAATGTTGGAAAGCATTTG+GGG 0.590606 8.4:+5877516 MS.gene035688:CDS
ATGTAATAGCAATTTGAACT+GGG 0.591708 8.4:-5877082 None:intergenic
GCTGAGTGTTTAGAAGAATG+TGG 0.594843 8.4:+5877255 MS.gene035688:CDS
AGTATCGAAATTATTTGCAG+AGG 0.599941 8.4:-5877691 None:intergenic
TGTGTTTGACACATTCTGGA+TGG 0.603495 8.4:+5877415 MS.gene035688:CDS
GAAAAGATAGGCTCCAAGGA+AGG 0.605492 8.4:+5876187 MS.gene035688:CDS
ATGGCAACTGCAGTTGCTCG+TGG 0.606472 8.4:-5877012 None:intergenic
ATGAACATGGGTGTTTAGCA+TGG 0.606847 8.4:+5877148 MS.gene035688:CDS
TGAGAAAATAGTGAAACTCA+AGG 0.607942 8.4:+5877635 MS.gene035688:CDS
TGATAATGTCAACTGAGGAA+GGG 0.615730 8.4:+5877601 MS.gene035688:CDS
ATAAAGCTGTCGCAGAGACA+GGG 0.619523 8.4:+5876023 MS.gene035688:CDS
GTTCATGATGGATTACCAGA+AGG 0.619894 8.4:+5875920 MS.gene035688:CDS
CGTATGGTTTCTGATGAACA+TGG 0.622684 8.4:+5877135 MS.gene035688:CDS
TGAGGCCCTGCAGTCCAAAG+AGG 0.631764 8.4:-5876127 None:intergenic
GCCAATGCATTGAGCTCACG+AGG 0.634992 8.4:-5877234 None:intergenic
GGTGTTTAAGGGCAATCCAG+AGG 0.637576 8.4:+5877293 MS.gene035688:CDS
TAATGTTGAAAGACTACATG+TGG 0.646294 8.4:+5875718 MS.gene035688:CDS
CTTCTTGCAAGGCTAAGGAG+TGG 0.657711 8.4:-5875776 None:intergenic
GAATTTGATAATGTCAACTG+AGG 0.658298 8.4:+5877596 MS.gene035688:CDS
ACATGTGTAAGGAGAGAGTG+AGG 0.667973 8.4:-5876145 None:intergenic
AAAACCAGGAAGGAAATCAA+CGG 0.674477 8.4:-5876896 None:intergenic
GAATGTTGGAAAGCATTTGG+GGG 0.676523 8.4:+5877517 MS.gene035688:CDS
GAAGCTCAGGAAAACCAGGA+AGG 0.678909 8.4:-5876906 None:intergenic
TCATCAGAAACCATACGTTG+CGG 0.707798 8.4:-5877129 None:intergenic
AATGCATTGAGCTCACGAGG+TGG 0.720607 8.4:-5877231 None:intergenic
GTATGGTTTCTGATGAACAT+GGG 0.751448 8.4:+5877136 MS.gene035688:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATTCTATTCTATTT+AGG - chr8.4:5876692-5876711 None:intergenic 10.0%
!!! ATTTTATTCTATTCTATTTA+GGG - chr8.4:5876691-5876710 None:intergenic 10.0%
!!! GTTTTTACATATTCATATAA+TGG - chr8.4:5876474-5876493 None:intergenic 15.0%
!!! TACAATTTATTTTTAGCAAA+TGG + chr8.4:5876645-5876664 MS.gene035688:intron 15.0%
!!! TCTACAAATAGATTTTATAT+AGG - chr8.4:5876346-5876365 None:intergenic 15.0%
!! AATTAAATAGTACAAAGAGT+TGG + chr8.4:5876708-5876727 MS.gene035688:intron 20.0%
!! ATTAAATAGTACAAAGAGTT+GGG + chr8.4:5876709-5876728 MS.gene035688:intron 20.0%
!! CTAAAAATAAATTGTAGTGT+AGG - chr8.4:5876641-5876660 None:intergenic 20.0%
! ACATCATAATGCTTTATGTT+AGG - chr8.4:5875902-5875921 None:intergenic 25.0%
! AGTTACAAGATTGAACATTA+GGG - chr8.4:5876597-5876616 None:intergenic 25.0%
! ATGTAATAGCAATTTGAACT+GGG - chr8.4:5877085-5877104 None:intergenic 25.0%
! ATTTACTCATTTAAGCTGTT+AGG + chr8.4:5876247-5876266 MS.gene035688:intron 25.0%
! GCCTTAATGAAGATAAAAAT+GGG - chr8.4:5875974-5875993 None:intergenic 25.0%
! GTATGAACCTTTAATATGTT+GGG - chr8.4:5876441-5876460 None:intergenic 25.0%
! TAGTTACAAGATTGAACATT+AGG - chr8.4:5876598-5876617 None:intergenic 25.0%
! TATGAACCTTTAATATGTTG+GGG - chr8.4:5876440-5876459 None:intergenic 25.0%
! TCAACAATGTTACACAAAAT+GGG + chr8.4:5876979-5876998 MS.gene035688:CDS 25.0%
! TGCCTTAATGAAGATAAAAA+TGG - chr8.4:5875975-5875994 None:intergenic 25.0%
! TGTATGAACCTTTAATATGT+TGG - chr8.4:5876442-5876461 None:intergenic 25.0%
! TTAAATAGTACAAAGAGTTG+GGG + chr8.4:5876710-5876729 MS.gene035688:intron 25.0%
! TTAACTCATTCTCAATAAGA+GGG - chr8.4:5877059-5877078 None:intergenic 25.0%
! TTCAACAATGTTACACAAAA+TGG + chr8.4:5876978-5876997 MS.gene035688:CDS 25.0%
! TTGTGTAACATTGTTGAAAA+TGG - chr8.4:5876976-5876995 None:intergenic 25.0%
! TTTAACTCATTCTCAATAAG+AGG - chr8.4:5877060-5877079 None:intergenic 25.0%
! TTTACTCATTTAAGCTGTTA+GGG + chr8.4:5876248-5876267 MS.gene035688:intron 25.0%
! TTTGTGAATTAAGTGTGATT+TGG - chr8.4:5876378-5876397 None:intergenic 25.0%
!! TTCAAATTGCTATTACATGT+TGG + chr8.4:5877087-5877106 MS.gene035688:CDS 25.0%
!!! AAAAGGAAAATTTGTTGCAT+GGG + chr8.4:5877353-5877372 MS.gene035688:CDS 25.0%
!!! ACCCATTTTTATCTTCATTA+AGG + chr8.4:5875970-5875989 MS.gene035688:CDS 25.0%
!!! ATGATTTTTAGCGATACATT+TGG - chr8.4:5876798-5876817 None:intergenic 25.0%
!!! TAGGTTTCATATGTTTTTGA+TGG + chr8.4:5876306-5876325 MS.gene035688:intron 25.0%
AAAAATGGTCTACTAACCAT+TGG - chr8.4:5877474-5877493 None:intergenic 30.0%
AAACATTAAGTGTTAGCAAG+TGG + chr8.4:5876395-5876414 MS.gene035688:intron 30.0%
AACCTTTGATCTCCAAAAAA+TGG - chr8.4:5877489-5877508 None:intergenic 30.0%
AAGCATTATGATGTTCATGA+TGG + chr8.4:5875908-5875927 MS.gene035688:CDS 30.0%
AATGTGGATGTCCATTTATT+TGG + chr8.4:5877271-5877290 MS.gene035688:CDS 30.0%
ATAACACTCTTATAGTTCTC+TGG - chr8.4:5876001-5876020 None:intergenic 30.0%
ATGTGGATGTCCATTTATTT+GGG + chr8.4:5877272-5877291 MS.gene035688:CDS 30.0%
CATGTAATAGCAATTTGAAC+TGG - chr8.4:5877086-5877105 None:intergenic 30.0%
CCATTTATTTGGGTGTTTAA+GGG + chr8.4:5877282-5877301 MS.gene035688:CDS 30.0%
GATCTTATCAGAGAAAAGAT+AGG + chr8.4:5876175-5876194 MS.gene035688:CDS 30.0%
GCTAAAAATCATTTGAGTAG+AGG + chr8.4:5876806-5876825 MS.gene035688:intron 30.0%
TAAATAGTACAAAGAGTTGG+GGG + chr8.4:5876711-5876730 MS.gene035688:intron 30.0%
TAATGTTGAAAGACTACATG+TGG + chr8.4:5875718-5875737 MS.gene035688:CDS 30.0%
TCCATTTATTTGGGTGTTTA+AGG + chr8.4:5877281-5877300 MS.gene035688:CDS 30.0%
TGAGAAAATAGTGAAACTCA+AGG + chr8.4:5877635-5877654 MS.gene035688:CDS 30.0%
! AACATTGCCAAATGGATTTA+CGG + chr8.4:5877317-5877336 MS.gene035688:CDS 30.0%
! AAGATAAAAATGGGTTCAAG+TGG - chr8.4:5875965-5875984 None:intergenic 30.0%
! AGATAAAAATGGGTTCAAGT+GGG - chr8.4:5875964-5875983 None:intergenic 30.0%
! AGTATCGAAATTATTTGCAG+AGG - chr8.4:5877694-5877713 None:intergenic 30.0%
! CAACTGAGAATTTTTCACAT+TGG - chr8.4:5877179-5877198 None:intergenic 30.0%
! TCAGTTGTGTATATTAGCTT+CGG + chr8.4:5877192-5877211 MS.gene035688:CDS 30.0%
! TGGTTACTGATGCATTTTAT+TGG + chr8.4:5876062-5876081 MS.gene035688:CDS 30.0%
!! AAGAATGTTGGAAAGCATTT+GGG + chr8.4:5877515-5877534 MS.gene035688:CDS 30.0%
!! ACTGATGCATTTTATTGGTT+TGG + chr8.4:5876067-5876086 MS.gene035688:CDS 30.0%
!! AGAGAACTATAAGAGTGTTA+TGG + chr8.4:5876000-5876019 MS.gene035688:CDS 30.0%
!! CAAAAGGAAAATTTGTTGCA+TGG + chr8.4:5877352-5877371 MS.gene035688:CDS 30.0%
!! GAATTTGATAATGTCAACTG+AGG + chr8.4:5877596-5877615 MS.gene035688:CDS 30.0%
!!! ACAAATGCTGCTTTATTTTC+TGG + chr8.4:5875851-5875870 MS.gene035688:CDS 30.0%
!!! ATGGTTAGTAGACCATTTTT+TGG + chr8.4:5877474-5877493 MS.gene035688:CDS 30.0%
AAAACCAGGAAGGAAATCAA+CGG - chr8.4:5876899-5876918 None:intergenic 35.0%
AAGGTTGAATGCAAGAATGT+TGG + chr8.4:5877503-5877522 MS.gene035688:CDS 35.0%
ACGGAAAGAACGAAAACAAA+AGG + chr8.4:5877336-5877355 MS.gene035688:CDS 35.0%
AGGGAAGAACATTACTTGTT+TGG + chr8.4:5876042-5876061 MS.gene035688:CDS 35.0%
CCCTTAAACACCCAAATAAA+TGG - chr8.4:5877285-5877304 None:intergenic 35.0%
GATCTGTGAAAACATGTGTA+AGG - chr8.4:5876159-5876178 None:intergenic 35.0%
GTATGGTTTCTGATGAACAT+GGG + chr8.4:5877136-5877155 MS.gene035688:CDS 35.0%
GTTCTTTCCGTAAATCCATT+TGG - chr8.4:5877327-5877346 None:intergenic 35.0%
TAAGGAAATGCATGCCAAAT+GGG + chr8.4:5876102-5876121 MS.gene035688:CDS 35.0%
TACCGTAGCAAATGAGTTTA+TGG - chr8.4:5877034-5877053 None:intergenic 35.0%
TCAATGTTGGATTGCATTGT+TGG + chr8.4:5877441-5877460 MS.gene035688:CDS 35.0%
TGTTTCAGGATTTCCATTTG+AGG - chr8.4:5877381-5877400 None:intergenic 35.0%
TTCAAAGCTGTTGAACGAAA+TGG + chr8.4:5877666-5877685 MS.gene035688:CDS 35.0%
! AGCAATTTTTGTACCTTCCT+TGG - chr8.4:5876203-5876222 None:intergenic 35.0%
! TGATAATGTCAACTGAGGAA+GGG + chr8.4:5877601-5877620 MS.gene035688:CDS 35.0%
! TGCCATAAACTCATTTGCTA+CGG + chr8.4:5877029-5877048 MS.gene035688:CDS 35.0%
!! AGAATGTTGGAAAGCATTTG+GGG + chr8.4:5877516-5877535 MS.gene035688:CDS 35.0%
!! CAAGAATGTTGGAAAGCATT+TGG + chr8.4:5877514-5877533 MS.gene035688:CDS 35.0%
!! TTGATAATGTCAACTGAGGA+AGG + chr8.4:5877600-5877619 MS.gene035688:CDS 35.0%
!!! GACCATTTTTTGGAGATCAA+AGG + chr8.4:5877484-5877503 MS.gene035688:CDS 35.0%
!!! TGCATTTTATTGGTTTGGTG+CGG + chr8.4:5876072-5876091 MS.gene035688:CDS 35.0%
ATATCACCTATCACTCCTTC+AGG - chr8.4:5876946-5876965 None:intergenic 40.0%
ATGAACATGGGTGTTTAGCA+TGG + chr8.4:5877148-5877167 MS.gene035688:CDS 40.0%
ATGTTGGATTGCATTGTTGG+TGG + chr8.4:5877444-5877463 MS.gene035688:CDS 40.0%
CGTATGGTTTCTGATGAACA+TGG + chr8.4:5877135-5877154 MS.gene035688:CDS 40.0%
CTAAGGAAATGCATGCCAAA+TGG + chr8.4:5876101-5876120 MS.gene035688:CDS 40.0%
GCTGAGTGTTTAGAAGAATG+TGG + chr8.4:5877255-5877274 MS.gene035688:CDS 40.0%
GGAGTGATAGGTGATATAGA+TGG + chr8.4:5876949-5876968 MS.gene035688:CDS 40.0%
GGTATGTGTTTGACACATTC+TGG + chr8.4:5877411-5877430 MS.gene035688:CDS 40.0%
TCATCAGAAACCATACGTTG+CGG - chr8.4:5877132-5877151 None:intergenic 40.0%
TCCAAATGGGAATGCCAAAA+CGG - chr8.4:5875744-5875763 None:intergenic 40.0%
TGTGTTTGACACATTCTGGA+TGG + chr8.4:5877415-5877434 MS.gene035688:CDS 40.0%
TTCTGGATGGAACTCAATGT+TGG + chr8.4:5877428-5877447 MS.gene035688:CDS 40.0%
! AAATCAGAAGCATGAAGCTC+AGG - chr8.4:5876922-5876941 None:intergenic 40.0%
! AGGAAGGAAATCAACGGTTT+TGG - chr8.4:5876893-5876912 None:intergenic 40.0%
!! AAAACCGTTGATTTCCTTCC+TGG + chr8.4:5876892-5876911 MS.gene035688:CDS 40.0%
!! GAATGTTGGAAAGCATTTGG+GGG + chr8.4:5877517-5877536 MS.gene035688:CDS 40.0%
!! GTTCATGATGGATTACCAGA+AGG + chr8.4:5875920-5875939 MS.gene035688:CDS 40.0%
ACATGTGTAAGGAGAGAGTG+AGG - chr8.4:5876148-5876167 None:intergenic 45.0%
AGTCCAAAGAGGAACCCATT+TGG - chr8.4:5876119-5876138 None:intergenic 45.0%
ATAAAGCTGTCGCAGAGACA+GGG + chr8.4:5876023-5876042 MS.gene035688:CDS 45.0%
ATCCTGAAACACTCAGCTGT+TGG + chr8.4:5877390-5877409 MS.gene035688:CDS 45.0%
CAATCCTTCTTGCAAGGCTA+AGG - chr8.4:5875784-5875803 None:intergenic 45.0%
CAGAGAAAAGATAGGCTCCA+AGG + chr8.4:5876183-5876202 MS.gene035688:CDS 45.0%
CCAGAGGAAACATTGCCAAA+TGG + chr8.4:5877309-5877328 MS.gene035688:CDS 45.0%
CCATTTGGCAATGTTTCCTC+TGG - chr8.4:5877312-5877331 None:intergenic 45.0%
CTCGCACCCCAACATATTAA+AGG + chr8.4:5876431-5876450 MS.gene035688:intron 45.0%
GAAAAGATAGGCTCCAAGGA+AGG + chr8.4:5876187-5876206 MS.gene035688:CDS 45.0%
GACCTGCATGTGTTCCAAAT+GGG - chr8.4:5875757-5875776 None:intergenic 45.0%
GATTTGCCTGAAGGAGTGAT+AGG + chr8.4:5876937-5876956 MS.gene035688:CDS 45.0%
TACCAACAGCTGAGTGTTTC+AGG - chr8.4:5877395-5877414 None:intergenic 45.0%
TGGCATGCATTTCCTTAGCT+AGG - chr8.4:5876099-5876118 None:intergenic 45.0%
! AAGACTACATGTGGCCGTTT+TGG + chr8.4:5875727-5875746 MS.gene035688:CDS 45.0%
! ATGCCAAATGGGTTCCTCTT+TGG + chr8.4:5876113-5876132 MS.gene035688:CDS 45.0%
! CATGCTTCTGATTTGCCTGA+AGG + chr8.4:5876928-5876947 MS.gene035688:CDS 45.0%
! TTCCCATTTGGAACACATGC+AGG + chr8.4:5875752-5875771 MS.gene035688:CDS 45.0%
!! ATTGGTGTGGGTGTTGACAA+TGG + chr8.4:5877540-5877559 MS.gene035688:CDS 45.0%
!! TGCGGTGTTGTCAAGATGAA+TGG - chr8.4:5877114-5877133 None:intergenic 45.0%
!! TTGGAAAGCATTTGGGGGAT+TGG + chr8.4:5877522-5877541 MS.gene035688:CDS 45.0%
!!! AATTTCAAATAATTTTTTTT+AGG + chr8.4:5876287-5876306 MS.gene035688:intron 5.0%
AATGCATTGAGCTCACGAGG+TGG - chr8.4:5877234-5877253 None:intergenic 50.0%
ACCTCGTGAGCTCAATGCAT+TGG + chr8.4:5877233-5877252 MS.gene035688:CDS 50.0%
CCAGAAGGTTATGTGCCTTC+AGG + chr8.4:5875935-5875954 MS.gene035688:CDS 50.0%
CTGCAGCAATCCTTCTTGCA+AGG - chr8.4:5875790-5875809 None:intergenic 50.0%
CTTCTTGCAAGGCTAAGGAG+TGG - chr8.4:5875779-5875798 None:intergenic 50.0%
CTTGACAACACCGCAACGTA+TGG + chr8.4:5877119-5877138 MS.gene035688:CDS 50.0%
GAAGCTCAGGAAAACCAGGA+AGG - chr8.4:5876909-5876928 None:intergenic 50.0%
GATAAAGCTGTCGCAGAGAC+AGG + chr8.4:5876022-5876041 MS.gene035688:CDS 50.0%
GCATGAAGCTCAGGAAAACC+AGG - chr8.4:5876913-5876932 None:intergenic 50.0%
GGACCTGCATGTGTTCCAAA+TGG - chr8.4:5875758-5875777 None:intergenic 50.0%
GGTGTTTAAGGGCAATCCAG+AGG + chr8.4:5877293-5877312 MS.gene035688:CDS 50.0%
TGTTGCATGGGCTCCTCAAA+TGG + chr8.4:5877365-5877384 MS.gene035688:CDS 50.0%
! AAGCATTTGGGGGATTGGTG+TGG + chr8.4:5877527-5877546 MS.gene035688:CDS 50.0%
! AGCATTTGGGGGATTGGTGT+GGG + chr8.4:5877528-5877547 MS.gene035688:CDS 50.0%
! CCTGAAGGCACATAACCTTC+TGG - chr8.4:5875938-5875957 None:intergenic 50.0%
!! CACTCCTTAGCCTTGCAAGA+AGG + chr8.4:5875777-5875796 MS.gene035688:CDS 50.0%
!! CATTGTTGGTGGTGTGCCAA+TGG + chr8.4:5877455-5877474 MS.gene035688:CDS 50.0%
!! GCCGTTTTGGCATTCCCATT+TGG + chr8.4:5875740-5875759 MS.gene035688:CDS 50.0%
ATGGCAACTGCAGTTGCTCG+TGG - chr8.4:5877015-5877034 None:intergenic 55.0%
GCCAATGCATTGAGCTCACG+AGG - chr8.4:5877237-5877256 None:intergenic 55.0%
GGGTTCCTCTTTGGACTGCA+GGG + chr8.4:5876122-5876141 MS.gene035688:CDS 55.0%
GGTTCAAGTGGGTGTCCTGA+AGG - chr8.4:5875953-5875972 None:intergenic 55.0%
TGGGTTCCTCTTTGGACTGC+AGG + chr8.4:5876121-5876140 MS.gene035688:CDS 55.0%
!! GTTTGGTGCGGACCTAGCTA+AGG + chr8.4:5876084-5876103 MS.gene035688:CDS 55.0%
GCATTGAGCTCACGAGGTGG+TGG - chr8.4:5877231-5877250 None:intergenic 60.0%
TGAGGCCCTGCAGTCCAAAG+AGG - chr8.4:5876130-5876149 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 5875692 5877737 5875692 ID=MS.gene035688
chr8.4 mRNA 5875692 5877737 5875692 ID=MS.gene035688.t1;Parent=MS.gene035688
chr8.4 exon 5875692 5876208 5875692 ID=MS.gene035688.t1.exon1;Parent=MS.gene035688.t1
chr8.4 CDS 5875692 5876208 5875692 ID=cds.MS.gene035688.t1;Parent=MS.gene035688.t1
chr8.4 exon 5876881 5877737 5876881 ID=MS.gene035688.t1.exon2;Parent=MS.gene035688.t1
chr8.4 CDS 5876881 5877737 5876881 ID=cds.MS.gene035688.t1;Parent=MS.gene035688.t1
Gene Sequence

>MS.gene035688

ATGTCTAGAGATAAAGGTGAATCAGTTAATGTTGAAAGACTACATGTGGCCGTTTTGGCATTCCCATTTGGAACACATGCAGGTCCACTCCTTAGCCTTGCAAGAAGGATTGCTGCAGAAGCTCATAAAGTTACATTTTCATTCTTATGCACAAACAAAACAAATGCTGCTTTATTTTCTGGATCAAATGACTATGATGAGTTTCTTCCTAACATAAAGCATTATGATGTTCATGATGGATTACCAGAAGGTTATGTGCCTTCAGGACACCCACTTGAACCCATTTTTATCTTCATTAAGGCAATGCCAGAGAACTATAAGAGTGTTATGGATAAAGCTGTCGCAGAGACAGGGAAGAACATTACTTGTTTGGTTACTGATGCATTTTATTGGTTTGGTGCGGACCTAGCTAAGGAAATGCATGCCAAATGGGTTCCTCTTTGGACTGCAGGGCCTCACTCTCTCCTTACACATGTTTTCACAGATCTTATCAGAGAAAAGATAGGCTCCAAGGAAGGTACAAAAATTGCTAATTTGATCAACAAATCTTCTTTAATTTACTCATTTAAGCTGTTAGGGCTTTTCATAAAGAAAAAATTTCAAATAATTTTTTTTAGGTTTCATATGTTTTTGATGGATGTACATCTAATTCCTATATAAAATCTATTTGTAGATACATCTAACCAAATCACACTTAATTCACAAACATTAAGTGTTAGCAAGTGGAAAATTAGTCGAACTCGCACCCCAACATATTAAAGGTTCATACACTCTTTTTACCATTATATGAATATGTAAAAACAATTTGTTATTTATAAAAACTAAATTCTATTTTTTTAAATCAATTTTCTAGTAGTGATTACTTCATCGTATGAAACTTGAATGAATGAATTAATTTATTTCCCTAATGTTCAATCTTGTAACTATATCTTAAAAAAAATTGAATCCTACACTACAATTTATTTTTAGCAAATGGATGCAGATGCATTTGCGACACCCTAAATAGAATAGAATAAAATTAAATAGTACAAAGAGTTGGGGGATATAATTATAATTATAATGTACAAATATGTACATATATAAAATTGAATGTTCTTTTTTCGCCAAATGTATCGCTAAAAATCATTTGAGTAGAGGATCATTAATCTACAATTTATAAGAATTTGATTTGTTCTTTCTTGTCTTACAGTCGATGATACCAAAACCGTTGATTTCCTTCCTGGTTTTCCTGAGCTTCATGCTTCTGATTTGCCTGAAGGAGTGATAGGTGATATAGATGGACCATTTTCAACAATGTTACACAAAATGGGACTAGAGTTACCACGAGCAACTGCAGTTGCCATAAACTCATTTGCTACGGTACACCCTCTTATTGAGAATGAGTTAAATTCCCAGTTCAAATTGCTATTACATGTTGGTCCATTCATCTTGACAACACCGCAACGTATGGTTTCTGATGAACATGGGTGTTTAGCATGGTTGAACCAATGTGAAAAATTCTCAGTTGTGTATATTAGCTTCGGAAGTCAGATAGTACCACCACCTCGTGAGCTCAATGCATTGGCTGAGTGTTTAGAAGAATGTGGATGTCCATTTATTTGGGTGTTTAAGGGCAATCCAGAGGAAACATTGCCAAATGGATTTACGGAAAGAACGAAAACAAAAGGAAAATTTGTTGCATGGGCTCCTCAAATGGAAATCCTGAAACACTCAGCTGTTGGTATGTGTTTGACACATTCTGGATGGAACTCAATGTTGGATTGCATTGTTGGTGGTGTGCCAATGGTTAGTAGACCATTTTTTGGAGATCAAAGGTTGAATGCAAGAATGTTGGAAAGCATTTGGGGGATTGGTGTGGGTGTTGACAATGGAGTTTTGACTAAAGAATCAACTATGAAAGCTTTGAATTTGATAATGTCAACTGAGGAAGGGAAGATAATGCGTGAGAAAATAGTGAAACTCAAGGAATCTGCATTCAAAGCTGTTGAACGAAATGGCACCTCTGCAAATAATTTCGATACTTTGATAAAGATTGTCACTAGTTAA
Protein sequence

>MS.gene035688.t1

MSRDKGESVNVERLHVAVLAFPFGTHAGPLLSLARRIAAEAHKVTFSFLCTNKTNAALFSGSNDYDEFLPNIKHYDVHDGLPEGYVPSGHPLEPIFIFIKAMPENYKSVMDKAVAETGKNITCLVTDAFYWFGADLAKEMHAKWVPLWTAGPHSLLTHVFTDLIREKIGSKEVDDTKTVDFLPGFPELHASDLPEGVIGDIDGPFSTMLHKMGLELPRATAVAINSFATVHPLIENELNSQFKLLLHVGPFILTTPQRMVSDEHGCLAWLNQCEKFSVVYISFGSQIVPPPRELNALAECLEECGCPFIWVFKGNPEETLPNGFTERTKTKGKFVAWAPQMEILKHSAVGMCLTHSGWNSMLDCIVGGVPMVSRPFFGDQRLNARMLESIWGIGVGVDNGVLTKESTMKALNLIMSTEEGKIMREKIVKLKESAFKAVERNGTSANNFDTLIKIVTS