AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene97216

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97216.t1 MTR_7g013240 92.045 440 35 0 1 440 1 440 0.0 840
MS.gene97216.t1 MTR_7g013260 90.930 441 39 1 1 440 1 441 0.0 835
MS.gene97216.t1 MTR_7g013200 70.682 440 127 2 1 439 1 439 0.0 655
MS.gene97216.t1 MTR_7g013220 67.627 451 133 3 1 439 1 450 0.0 642
MS.gene97216.t1 MTR_7g013180 58.333 444 173 5 5 439 4 444 0.0 545
MS.gene97216.t1 MTR_3g008010 31.489 470 280 10 5 436 9 474 9.77e-73 236
MS.gene97216.t1 MTR_6g014250 31.489 470 278 12 6 436 10 474 6.01e-72 234
MS.gene97216.t1 MTR_6g014290 31.702 470 279 11 5 436 9 474 1.45e-71 233
MS.gene97216.t1 MTR_6g014020 30.672 476 278 11 5 436 9 476 9.04e-70 229
MS.gene97216.t1 MTR_7g011470 31.749 463 272 12 5 436 9 458 9.73e-70 228
MS.gene97216.t1 MTR_2g008210 32.623 469 276 12 5 437 10 474 1.80e-69 228
MS.gene97216.t1 MTR_7g011470 31.613 465 274 12 5 436 9 462 4.95e-69 226
MS.gene97216.t1 MTR_6g014040 31.290 473 280 13 5 436 9 477 9.72e-69 226
MS.gene97216.t1 MTR_0288s0020 32.321 461 271 13 5 436 9 457 9.79e-69 226
MS.gene97216.t1 MTR_6g014170 31.102 463 275 11 5 436 9 458 9.93e-69 226
MS.gene97216.t1 MTR_5g098960 31.279 438 277 12 5 426 6 435 1.16e-68 225
MS.gene97216.t1 MTR_6g038230 31.808 459 273 11 4 437 9 452 2.06e-68 224
MS.gene97216.t1 MTR_3g479520 32.059 471 276 11 5 436 14 479 3.80e-68 225
MS.gene97216.t1 MTR_6g014187 30.462 476 279 11 5 436 9 476 7.36e-68 224
MS.gene97216.t1 MTR_6g013450 31.799 478 271 13 5 436 9 477 1.86e-67 223
MS.gene97216.t1 MTR_6g013440 29.661 472 288 9 5 436 10 477 2.00e-67 223
MS.gene97216.t1 MTR_6g014270 31.158 475 281 11 5 437 6 476 2.37e-67 223
MS.gene97216.t1 MTR_7g080935 31.957 460 265 13 6 437 11 450 2.79e-67 222
MS.gene97216.t1 MTR_6g013960 30.290 482 272 14 5 436 9 476 3.50e-67 222
MS.gene97216.t1 MTR_8g059425 31.290 473 277 12 5 436 9 474 4.61e-67 222
MS.gene97216.t1 MTR_6g014150 30.297 472 285 11 5 436 6 473 5.27e-67 222
MS.gene97216.t1 MTR_3g479470 30.655 473 279 10 5 436 12 476 1.23e-66 221
MS.gene97216.t1 MTR_7g080940 30.635 457 275 12 6 437 11 450 1.54e-66 220
MS.gene97216.t1 MTR_6g014220 30.689 479 272 14 5 436 9 474 1.86e-66 220
MS.gene97216.t1 MTR_3g479490 31.847 471 277 12 6 437 6 471 2.77e-66 219
MS.gene97216.t1 MTR_6g013990 30.426 470 285 12 5 436 9 474 5.97e-66 219
MS.gene97216.t1 MTR_5g058320 31.692 467 270 13 5 436 9 461 8.79e-66 218
MS.gene97216.t1 MTR_6g014200 29.661 472 288 10 5 436 6 473 1.50e-65 218
MS.gene97216.t1 MTR_6g014310 30.526 475 286 10 3 437 8 478 2.25e-65 218
MS.gene97216.t1 MTR_6g038220 31.223 458 274 12 5 437 10 451 1.38e-63 212
MS.gene97216.t1 MTR_3g079480 30.573 471 283 12 5 436 20 485 2.83e-63 212
MS.gene97216.t1 MTR_6g038240 30.786 458 279 13 4 437 9 452 5.28e-63 211
MS.gene97216.t1 MTR_5g464810 31.924 473 274 13 4 436 10 474 1.70e-62 210
MS.gene97216.t1 MTR_5g064240 31.924 473 274 13 4 436 10 474 1.70e-62 210
MS.gene97216.t1 MTR_4g094920 31.291 457 282 10 7 437 27 477 3.64e-62 209
MS.gene97216.t1 MTR_4g095008 31.236 461 279 13 6 437 11 462 7.52e-62 209
MS.gene97216.t1 MTR_6g013920 31.092 476 275 12 5 436 9 475 1.37e-61 207
MS.gene97216.t1 MTR_6g014240 30.022 453 279 11 6 436 7 443 3.06e-61 206
MS.gene97216.t1 MTR_0036s0220 31.328 482 265 15 4 436 10 474 4.16e-61 206
MS.gene97216.t1 MTR_5g035580 31.441 458 271 14 6 438 13 452 9.84e-61 205
MS.gene97216.t1 MTR_6g014050 30.544 478 280 12 3 436 8 477 1.03e-60 205
MS.gene97216.t1 MTR_6g038200 30.786 458 279 11 4 437 9 452 1.17e-60 204
MS.gene97216.t1 MTR_6g011340 30.085 472 286 12 5 436 9 476 1.46e-60 205
MS.gene97216.t1 MTR_6g038300 30.193 467 269 15 5 437 10 453 1.55e-60 204
MS.gene97216.t1 MTR_6g013900 30.042 476 280 12 5 436 9 475 2.32e-60 204
MS.gene97216.t1 MTR_5g031840 30.490 469 279 10 5 438 4 460 6.60e-60 202
MS.gene97216.t1 MTR_5g035560 30.238 463 266 14 6 436 11 448 7.48e-60 203
MS.gene97216.t1 MTR_5g464760 30.867 473 279 12 5 436 11 476 3.44e-59 201
MS.gene97216.t1 MTR_7g080950 28.352 455 288 11 6 437 6 445 2.22e-58 198
MS.gene97216.t1 MTR_1g107380 29.764 467 282 12 6 436 13 469 2.26e-58 199
MS.gene97216.t1 MTR_6g014300 28.541 473 276 12 5 436 11 462 4.29e-57 195
MS.gene97216.t1 MTR_4g094220 28.125 480 287 12 5 436 6 475 8.81e-57 195
MS.gene97216.t1 MTR_8g088560 30.349 458 281 14 6 437 10 455 1.16e-55 191
MS.gene97216.t1 MTR_5g031860 29.936 471 282 12 4 438 10 468 1.30e-55 191
MS.gene97216.t1 MTR_3g069690 31.498 454 273 16 6 436 8 446 3.21e-54 187
MS.gene97216.t1 MTR_7g080900 27.391 460 288 13 6 437 12 453 4.44e-53 184
MS.gene97216.t1 MTR_5g031830 28.875 471 286 11 5 438 11 469 1.00e-52 184
MS.gene97216.t1 MTR_8g083290 28.480 467 293 14 4 436 1 460 1.18e-52 183
MS.gene97216.t1 MTR_3g069710 29.712 451 281 14 8 437 14 449 3.08e-52 182
MS.gene97216.t1 MTR_3g084520 29.202 476 282 16 6 437 6 470 3.47e-51 180
MS.gene97216.t1 MTR_5g072860 29.130 460 282 13 6 436 18 462 9.81e-50 176
MS.gene97216.t1 MTR_3g049970 29.211 469 283 17 6 436 9 466 3.75e-49 174
MS.gene97216.t1 MTR_5g016480 30.238 463 272 16 15 437 17 468 9.71e-49 173
MS.gene97216.t1 MTR_6g014190 35.600 250 136 6 207 436 39 283 1.41e-48 168
MS.gene97216.t1 MTR_7g070660 28.542 480 280 16 6 436 11 476 2.84e-48 172
MS.gene97216.t1 MTR_3g084530 28.690 481 276 18 6 436 6 469 6.41e-48 171
MS.gene97216.t1 MTR_8g027885 29.202 476 265 18 4 432 15 465 9.76e-48 171
MS.gene97216.t1 MTR_8g007585 41.379 203 109 4 240 436 190 388 5.27e-47 166
MS.gene97216.t1 MTR_8g007585 28.025 157 105 2 6 154 10 166 9.10e-15 76.3
MS.gene97216.t1 MTR_1g107350 29.274 468 284 19 6 436 8 465 6.22e-47 168
MS.gene97216.t1 MTR_7g117405 28.807 486 275 17 4 436 10 477 9.48e-47 168
MS.gene97216.t1 MTR_7g070610 29.072 485 276 17 6 436 13 483 1.04e-46 168
MS.gene97216.t1 MTR_8g027870 27.907 473 275 16 4 432 15 465 2.49e-46 167
MS.gene97216.t1 MTR_8g008990 27.629 485 281 15 6 440 6 470 2.71e-46 166
MS.gene97216.t1 MTR_8g083280 28.078 463 286 14 8 436 9 458 3.13e-46 166
MS.gene97216.t1 MTR_0477s0010 39.409 203 113 4 240 436 115 313 6.21e-46 162
MS.gene97216.t1 MTR_1g032490 29.574 470 280 17 6 436 10 467 8.36e-46 165
MS.gene97216.t1 MTR_8g009063 27.235 481 286 12 6 440 13 475 1.12e-45 165
MS.gene97216.t1 MTR_8g064870 28.512 477 274 16 8 436 13 470 1.19e-45 165
MS.gene97216.t1 MTR_1g107315 29.362 470 281 16 6 436 8 465 1.94e-45 164
MS.gene97216.t1 MTR_7g070940 27.527 465 291 10 10 436 13 469 2.11e-45 164
MS.gene97216.t1 MTR_0184s0030 29.032 403 245 14 61 435 74 463 2.48e-45 164
MS.gene97216.t1 MTR_1g107360 27.957 465 286 15 6 436 9 458 6.26e-45 163
MS.gene97216.t1 MTR_1g107375 27.706 462 284 13 6 436 8 450 6.66e-45 162
MS.gene97216.t1 MTR_4g485630 27.637 474 288 18 6 436 9 470 1.11e-44 162
MS.gene97216.t1 MTR_7g071040 27.066 484 287 17 6 436 17 487 1.82e-44 162
MS.gene97216.t1 MTR_3g084540 27.536 483 280 18 6 436 6 470 2.49e-44 161
MS.gene97216.t1 MTR_8g064880 29.412 425 258 14 8 396 11 429 3.24e-44 161
MS.gene97216.t1 MTR_7g117170 26.050 476 300 14 5 440 14 477 3.74e-44 161
MS.gene97216.t1 MTR_6g023665 26.824 466 286 12 10 435 17 467 4.11e-44 160
MS.gene97216.t1 MTR_1g107365 28.755 466 275 17 6 436 45 488 6.95e-44 160
MS.gene97216.t1 MTR_8g009055 27.386 482 284 14 6 440 6 468 1.03e-43 159
MS.gene97216.t1 MTR_4g064987 29.167 432 265 13 3 410 5 419 1.46e-43 159
MS.gene97216.t1 MTR_1g107285 28.266 467 283 16 7 436 9 460 2.15e-43 159
MS.gene97216.t1 MTR_8g009050 28.753 393 231 9 85 440 88 468 5.20e-43 157
MS.gene97216.t1 MTR_4g064987 29.792 433 255 14 3 410 5 413 7.20e-43 157
MS.gene97216.t1 MTR_0184s0040 27.021 470 300 14 6 440 21 482 1.09e-42 157
MS.gene97216.t1 MTR_0078s0190 27.021 470 300 14 6 440 21 482 1.09e-42 157
MS.gene97216.t1 MTR_7g070780 28.252 492 270 19 6 436 11 480 1.62e-42 157
MS.gene97216.t1 MTR_4g108250 27.236 492 279 19 6 436 11 484 2.41e-42 156
MS.gene97216.t1 MTR_7g070800 27.197 478 290 17 6 436 6 472 2.79e-42 156
MS.gene97216.t1 MTR_7g047030 27.902 448 284 14 1 417 1 440 6.72e-42 154
MS.gene97216.t1 MTR_7g047270 27.902 448 284 14 1 417 1 440 6.72e-42 154
MS.gene97216.t1 MTR_4g485640 27.097 465 275 16 16 436 219 663 6.79e-42 157
MS.gene97216.t1 MTR_7g071050 26.757 441 255 13 6 417 13 414 1.20e-41 153
MS.gene97216.t1 MTR_8g006260 26.566 463 290 13 6 428 6 458 1.31e-41 154
MS.gene97216.t1 MTR_8g006730 28.194 454 260 15 10 418 10 442 1.58e-41 153
MS.gene97216.t1 MTR_7g055710 27.673 477 284 17 6 432 11 476 6.37e-41 152
MS.gene97216.t1 MTR_6g488280 26.327 471 276 14 10 432 10 457 7.80e-41 151
MS.gene97216.t1 MTR_0428s0010 26.327 471 276 14 10 432 10 457 7.80e-41 151
MS.gene97216.t1 MTR_8g012635 28.645 391 242 13 77 435 82 467 1.13e-40 151
MS.gene97216.t1 MTR_0891s0010 32.593 270 156 6 189 436 21 286 1.37e-40 147
MS.gene97216.t1 MTR_8g009073 26.609 466 277 13 6 430 6 447 1.43e-40 151
MS.gene97216.t1 MTR_6g014186 25.847 472 268 15 5 436 6 435 2.24e-40 150
MS.gene97216.t1 MTR_1g019510 26.195 481 288 13 6 440 6 465 2.40e-40 150
MS.gene97216.t1 MTR_3g031450 26.724 464 280 15 3 436 15 448 2.77e-40 150
MS.gene97216.t1 MTR_7g070810 28.184 479 273 18 10 436 13 472 2.81e-40 150
MS.gene97216.t1 MTR_7g102450 26.250 480 287 13 4 436 9 468 2.90e-40 150
MS.gene97216.t1 MTR_8g012650 29.834 362 218 11 106 435 110 467 3.11e-40 150
MS.gene97216.t1 MTR_6g033615 36.574 216 122 5 223 428 229 439 3.53e-40 149
MS.gene97216.t1 MTR_7g070740 27.443 481 288 18 6 436 11 480 3.64e-40 150
MS.gene97216.t1 MTR_6g005600 26.809 470 292 15 6 435 6 463 4.38e-40 150
MS.gene97216.t1 MTR_8g043470 26.854 391 235 8 61 436 20 374 5.17e-40 147
MS.gene97216.t1 MTR_5g045960 28.873 426 231 15 6 381 9 412 7.64e-40 149
MS.gene97216.t1 MTR_7g070930 27.198 489 280 18 6 436 14 484 7.88e-40 149
MS.gene97216.t1 MTR_3g479610 33.766 231 138 5 217 436 83 309 9.26e-40 145
MS.gene97216.t1 MTR_8g066610 28.041 485 276 18 6 436 9 474 1.45e-39 148
MS.gene97216.t1 MTR_7g070860 27.292 469 279 18 10 436 11 459 1.53e-39 148
MS.gene97216.t1 MTR_7g102550 27.403 489 282 18 6 436 9 482 1.65e-39 148
MS.gene97216.t1 MTR_0078s0010 27.111 450 285 11 1 417 1 440 5.73e-39 146
MS.gene97216.t1 MTR_6g033625 28.389 391 230 13 85 435 80 460 6.11e-39 146
MS.gene97216.t1 MTR_6g033725 27.095 358 225 9 104 435 110 457 7.05e-39 146
MS.gene97216.t1 MTR_8g008970 27.615 478 264 14 6 440 6 444 1.10e-38 149
MS.gene97216.t1 MTR_8g008970 30.566 265 164 7 191 440 531 790 1.31e-29 122
MS.gene97216.t1 MTR_6g033660 28.533 368 220 10 97 435 106 459 2.09e-38 145
MS.gene97216.t1 MTR_7g070910 27.143 490 279 19 6 436 11 481 2.17e-38 145
MS.gene97216.t1 MTR_2g059240 25.161 465 298 11 5 433 12 462 5.57e-38 144
MS.gene97216.t1 MTR_5g019580 26.022 465 281 15 6 421 7 457 6.16e-38 144
MS.gene97216.t1 MTR_5g072810 26.350 463 287 15 6 437 12 451 6.69e-38 143
MS.gene97216.t1 MTR_4g118000 26.115 471 287 12 7 436 13 463 1.41e-37 143
MS.gene97216.t1 MTR_8g077590 26.031 388 254 11 76 435 80 462 1.45e-37 142
MS.gene97216.t1 MTR_3g031400 26.374 455 289 15 4 436 16 446 1.50e-37 142
MS.gene97216.t1 MTR_8g012630 39.713 209 104 7 249 435 203 411 1.71e-37 141
MS.gene97216.t1 MTR_6g033675 27.945 365 228 11 97 435 105 460 1.75e-37 142
MS.gene97216.t1 MTR_8g006710 26.371 474 293 14 5 437 5 463 1.77e-37 142
MS.gene97216.t1 MTR_7g046490 25.212 472 299 14 5 437 5 461 2.18e-37 142
MS.gene97216.t1 MTR_8g006270 26.596 470 293 15 6 437 6 461 2.53e-37 142
MS.gene97216.t1 MTR_7g102560 25.880 483 295 17 6 436 9 480 2.77e-37 142
MS.gene97216.t1 MTR_7g102490 26.694 487 289 16 6 436 9 483 3.04e-37 142
MS.gene97216.t1 MTR_8g009067 27.763 371 222 9 90 430 93 447 5.61e-37 141
MS.gene97216.t1 MTR_2g098430 25.470 479 303 16 8 439 8 479 8.28e-37 141
MS.gene97216.t1 MTR_7g102460 25.971 489 288 16 6 436 9 481 8.77e-37 141
MS.gene97216.t1 MTR_5g045970 25.562 489 291 17 6 436 16 489 1.73e-36 140
MS.gene97216.t1 MTR_5g070090 27.332 461 292 14 6 436 11 458 1.78e-36 139
MS.gene97216.t1 MTR_8g012745 27.970 404 248 14 68 435 68 464 2.66e-36 139
MS.gene97216.t1 MTR_5g075440 25.745 470 289 14 4 437 8 453 3.24e-36 139
MS.gene97216.t1 MTR_5g072820 25.000 456 299 12 6 437 10 446 5.63e-36 138
MS.gene97216.t1 MTR_8g009067 29.118 340 201 10 118 430 3 329 6.72e-36 135
MS.gene97216.t1 MTR_5g072840 25.054 463 290 14 6 437 10 446 1.13e-35 137
MS.gene97216.t1 MTR_4g117980 26.708 483 285 17 6 436 13 478 1.51e-35 137
MS.gene97216.t1 MTR_4g485620 27.753 454 286 17 20 436 3 451 1.89e-35 137
MS.gene97216.t1 MTR_4g485590 27.427 412 220 15 6 379 9 379 1.91e-35 135
MS.gene97216.t1 MTR_4g024020 25.615 488 294 17 6 436 9 484 1.99e-35 137
MS.gene97216.t1 MTR_4g117960 26.955 486 279 15 6 436 13 477 2.96e-35 136
MS.gene97216.t1 MTR_5g019580 32.661 248 130 7 208 421 237 481 6.41e-35 136
MS.gene97216.t1 MTR_5g098930 25.000 472 297 15 10 438 9 466 6.42e-35 135
MS.gene97216.t1 MTR_8g009073 28.875 329 186 9 133 430 7 318 1.50e-34 132
MS.gene97216.t1 MTR_1g019520 34.434 212 119 6 249 440 3 214 2.46e-34 128
MS.gene97216.t1 MTR_5g087620 25.458 491 298 18 5 436 9 490 3.99e-34 133
MS.gene97216.t1 MTR_0536s0010 27.273 473 274 16 10 436 25 473 4.95e-34 133
MS.gene97216.t1 MTR_6g013680 26.764 411 210 13 61 436 17 371 5.13e-34 131
MS.gene97216.t1 MTR_4g117890 26.543 486 271 20 10 438 17 473 5.49e-34 133
MS.gene97216.t1 MTR_5g072830 25.000 456 299 14 6 437 10 446 6.13e-34 132
MS.gene97216.t1 MTR_4g117950 27.706 462 287 15 10 436 10 459 7.49e-34 132
MS.gene97216.t1 MTR_6g035295 26.160 474 295 16 10 436 16 481 8.34e-34 132
MS.gene97216.t1 MTR_6g014160 27.479 353 192 8 45 364 36 357 1.24e-33 130
MS.gene97216.t1 MTR_0536s0020 25.684 475 285 14 10 436 22 476 4.70e-33 130
MS.gene97216.t1 MTR_4g128720 26.049 453 298 17 6 436 15 452 4.80e-33 130
MS.gene97216.t1 MTR_1g029540 23.913 460 296 12 11 437 19 457 7.50e-33 129
MS.gene97216.t1 MTR_1g062380 23.663 486 307 14 6 437 16 491 1.03e-32 129
MS.gene97216.t1 MTR_8g012730 33.471 242 126 8 183 404 45 271 1.57e-32 125
MS.gene97216.t1 MTR_5g090600 23.312 459 307 15 10 438 9 452 2.56e-32 128
MS.gene97216.t1 MTR_8g465670 24.109 477 292 16 10 436 11 467 3.10e-32 128
MS.gene97216.t1 MTR_3g009510 27.979 386 226 13 98 436 93 473 3.57e-32 128
MS.gene97216.t1 MTR_2g035020 25.996 477 290 12 10 436 15 478 3.61e-32 128
MS.gene97216.t1 MTR_4g031800 24.359 468 306 12 10 438 13 471 6.33e-32 127
MS.gene97216.t1 MTR_5g029800 25.527 474 298 17 6 436 13 474 6.55e-32 127
MS.gene97216.t1 MTR_8g090095 25.105 478 277 16 11 437 30 477 9.33e-32 127
MS.gene97216.t1 MTR_5g090630 24.094 469 303 15 10 438 9 464 1.08e-31 126
MS.gene97216.t1 MTR_5g067170 27.812 489 270 20 6 436 13 476 1.12e-31 126
MS.gene97216.t1 MTR_0078s0060 26.009 446 284 14 6 417 6 439 1.13e-31 126
MS.gene97216.t1 MTR_5g090580 22.574 474 313 12 10 438 9 473 1.21e-31 126
MS.gene97216.t1 MTR_7g070870 26.304 460 279 15 10 436 23 455 1.38e-31 126
MS.gene97216.t1 MTR_2g034990 26.415 477 294 16 6 436 13 478 1.44e-31 126
MS.gene97216.t1 MTR_5g090700 23.173 479 306 15 10 438 9 475 2.43e-31 125
MS.gene97216.t1 MTR_8g006220 24.229 454 281 15 10 416 10 447 1.27e-30 123
MS.gene97216.t1 MTR_5g090670 23.270 477 308 15 10 438 9 475 2.59e-30 122
MS.gene97216.t1 MTR_8g466240 24.421 475 291 15 6 440 8 454 3.59e-30 122
MS.gene97216.t1 MTR_4g008630 28.417 278 161 6 190 437 191 460 3.62e-30 122
MS.gene97216.t1 MTR_5g004940 33.028 218 114 6 227 436 181 374 4.60e-30 120
MS.gene97216.t1 MTR_5g016660 24.324 481 296 17 10 436 14 480 4.88e-30 122
MS.gene97216.t1 MTR_2g035040 30.980 255 148 7 209 436 130 383 5.53e-30 120
MS.gene97216.t1 MTR_7g102520 31.381 239 133 6 229 436 247 485 7.61e-30 121
MS.gene97216.t1 MTR_5g039900 25.052 483 287 19 10 436 17 480 8.30e-30 121
MS.gene97216.t1 MTR_7g067120 27.442 430 262 18 6 418 9 405 8.60e-30 120
MS.gene97216.t1 MTR_4g128690 26.327 452 299 18 4 436 13 449 1.39e-29 120
MS.gene97216.t1 MTR_5g090660 23.418 474 307 18 10 438 9 471 1.66e-29 121
MS.gene97216.t1 MTR_5g040030 25.311 482 290 17 10 436 18 484 1.86e-29 120
MS.gene97216.t1 MTR_8g071070 25.536 466 305 16 6 436 7 465 2.06e-29 120
MS.gene97216.t1 MTR_5g066390 34.872 195 111 7 252 436 23 211 2.41e-29 114
MS.gene97216.t1 MTR_7g012120 32.456 228 130 6 233 436 253 480 2.55e-29 120
MS.gene97216.t1 MTR_5g090620 21.237 485 307 14 10 438 9 474 3.25e-29 119
MS.gene97216.t1 MTR_2086s0010 33.721 172 103 4 272 436 1 168 4.69e-29 112
MS.gene97216.t1 MTR_1996s0010 33.721 172 103 4 272 436 1 168 4.69e-29 112
MS.gene97216.t1 MTR_5g070040 26.496 468 292 17 7 437 12 464 5.31e-29 119
MS.gene97216.t1 MTR_6g035265 25.417 480 287 19 6 436 13 470 7.82e-29 118
MS.gene97216.t1 MTR_0009s0240 25.000 464 300 17 6 436 7 455 6.40e-28 115
MS.gene97216.t1 MTR_8g044140 25.390 449 274 18 33 436 13 445 6.98e-28 115
MS.gene97216.t1 MTR_1g040310 24.790 476 295 18 10 436 19 480 7.52e-28 115
MS.gene97216.t1 MTR_5g090610 28.814 236 141 6 228 438 226 459 7.91e-28 115
MS.gene97216.t1 MTR_7g470610 33.333 201 114 5 208 388 76 276 1.03e-27 112
MS.gene97216.t1 MTR_7g070583 33.333 201 114 5 208 388 76 276 1.03e-27 112
MS.gene97216.t1 MTR_8g068360 26.566 463 289 18 6 432 12 459 1.05e-27 115
MS.gene97216.t1 MTR_5g027210 32.812 192 108 5 236 408 263 452 1.06e-27 115
MS.gene97216.t1 MTR_8g074550 25.202 496 280 18 6 432 8 481 1.86e-27 114
MS.gene97216.t1 MTR_7g067330 25.058 431 271 15 6 418 9 405 2.35e-27 113
MS.gene97216.t1 MTR_1g090270 24.476 429 279 17 6 406 15 426 5.25e-27 113
MS.gene97216.t1 MTR_2g046820 23.013 478 290 13 10 436 9 459 4.83e-26 110
MS.gene97216.t1 MTR_8g007565 24.781 456 275 14 6 416 7 439 4.85e-26 110
MS.gene97216.t1 MTR_8g068330 26.258 457 299 17 6 432 8 456 6.36e-26 110
MS.gene97216.t1 MTR_8g032950 32.710 214 119 5 249 437 265 478 9.20e-26 109
MS.gene97216.t1 MTR_8g007650 24.781 456 275 14 6 416 7 439 9.90e-26 109
MS.gene97216.t1 MTR_2g040530 23.992 471 296 17 10 436 9 461 1.16e-25 109
MS.gene97216.t1 MTR_6g014185 31.970 269 126 12 186 436 112 341 2.12e-25 107
MS.gene97216.t1 MTR_8g068340 25.714 420 263 16 6 390 12 417 3.86e-25 107
MS.gene97216.t1 MTR_5g072850 26.067 445 239 15 6 436 10 378 4.26e-25 106
MS.gene97216.t1 MTR_6g035185 28.638 213 127 4 249 436 267 479 4.38e-25 107
MS.gene97216.t1 MTR_7g039550 32.353 204 121 6 250 436 55 258 1.17e-24 103
MS.gene97216.t1 MTR_7g070760 36.429 140 67 2 250 388 90 208 1.24e-23 98.6
MS.gene97216.t1 MTR_3g009490 30.435 184 106 6 275 436 2 185 2.23e-23 97.4
MS.gene97216.t1 MTR_4g079270 31.527 203 124 5 228 420 242 439 2.46e-23 102
MS.gene97216.t1 MTR_8g056740 33.929 168 106 3 249 412 167 333 1.41e-22 99.4
MS.gene97216.t1 MTR_4g082820 25.259 483 289 19 6 440 7 465 1.61e-22 100
MS.gene97216.t1 MTR_1g107325 36.508 126 75 3 316 436 224 349 2.42e-22 98.2
MS.gene97216.t1 MTR_2g046750 26.641 259 154 8 208 436 210 462 3.76e-22 99.0
MS.gene97216.t1 MTR_7g070995 37.410 139 73 4 312 436 3 141 5.86e-22 92.4
MS.gene97216.t1 MTR_8g009840 31.217 189 110 4 267 435 333 521 1.05e-21 97.8
MS.gene97216.t1 MTR_4g059370 34.756 164 98 5 252 406 190 353 1.22e-21 96.7
MS.gene97216.t1 MTR_5g066410 23.973 438 278 14 10 416 2 415 1.30e-21 97.1
MS.gene97216.t1 MTR_2g014900 33.962 159 99 5 250 402 256 414 2.48e-21 96.3
MS.gene97216.t1 MTR_7g080960 29.630 189 89 3 249 437 324 468 2.85e-21 96.3
MS.gene97216.t1 MTR_7g080960 27.679 224 137 9 6 219 12 220 3.45e-14 74.7
MS.gene97216.t1 MTR_6g014000 36.719 128 74 3 315 439 32 155 2.93e-21 96.3
MS.gene97216.t1 MTR_3g479620 33.742 163 99 3 5 159 5 166 1.38e-20 89.0
MS.gene97216.t1 MTR_4g079250 30.882 204 129 5 227 420 238 439 1.78e-20 94.0
MS.gene97216.t1 MTR_2g008226 26.712 438 271 17 6 406 10 434 8.99e-20 91.7
MS.gene97216.t1 MTR_2g083430 25.342 438 277 16 1 406 1 420 1.03e-19 91.7
MS.gene97216.t1 MTR_4g123553 24.018 433 294 14 6 416 15 434 2.10e-19 90.5
MS.gene97216.t1 MTR_2g008220 23.963 434 279 17 6 406 14 429 1.38e-18 88.2
MS.gene97216.t1 MTR_2g046620 24.356 427 281 16 6 406 16 426 1.48e-18 88.2
MS.gene97216.t1 MTR_2g008225 23.448 435 280 17 6 406 15 430 1.96e-18 87.8
MS.gene97216.t1 MTR_0078s0200 27.600 250 161 9 61 302 74 311 7.12e-18 84.3
MS.gene97216.t1 MTR_3g435310 33.540 161 97 5 252 406 228 384 9.03e-18 85.5
MS.gene97216.t1 MTR_6g013435 28.279 244 113 7 210 436 105 303 2.12e-17 83.2
MS.gene97216.t1 MTR_4g082810 27.413 259 155 6 133 371 150 395 2.89e-17 84.0
MS.gene97216.t1 MTR_2g083480 24.208 442 300 16 6 421 8 440 7.65e-17 82.8
MS.gene97216.t1 MTR_0536s0030 34.783 138 74 4 315 437 213 349 8.54e-17 82.0
MS.gene97216.t1 MTR_6g078320 20.779 462 321 12 6 427 11 467 1.61e-16 82.0
MS.gene97216.t1 MTR_6g036650 31.980 197 102 8 252 434 279 457 1.70e-16 82.0
MS.gene97216.t1 MTR_5g090690 31.469 143 80 3 225 350 165 306 9.08e-16 79.0
MS.gene97216.t1 MTR_6g014195 30.061 163 102 4 5 155 9 171 9.41e-16 76.3
MS.gene97216.t1 MTR_6g015160 55.000 60 26 1 333 391 30 89 1.18e-15 72.4
MS.gene97216.t1 MTR_4g077960 32.298 161 99 5 252 406 246 402 1.48e-15 79.0
MS.gene97216.t1 MTR_0199s0010 28.025 157 105 2 6 154 10 166 4.42e-15 75.9
MS.gene97216.t1 MTR_2g083380 23.598 428 285 13 6 406 25 437 8.00e-15 76.6
MS.gene97216.t1 MTR_6g013890 27.273 209 78 7 210 402 84 234 2.17e-14 73.2
MS.gene97216.t1 MTR_1g090280 31.944 144 89 5 272 406 133 276 2.56e-14 73.9
MS.gene97216.t1 MTR_2g083490 23.557 433 279 16 6 406 8 420 1.02e-13 73.2
MS.gene97216.t1 MTR_8g006230 25.954 262 177 8 55 307 2 255 1.41e-13 71.2
MS.gene97216.t1 MTR_6g042310 27.848 158 110 3 252 406 272 428 2.69e-13 72.0
MS.gene97216.t1 MTR_0475s0020 37.624 101 57 3 5 99 9 109 2.83e-13 68.9
MS.gene97216.t1 MTR_8g028755 23.171 246 134 7 162 402 26 221 1.03e-12 67.8
MS.gene97216.t1 MTR_0475s0030 40.580 69 37 1 331 399 11 75 2.10e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97216.t1 AT3G02100 40.440 455 242 8 5 438 12 458 5.02e-121 360
MS.gene97216.t1 AT1G05675 30.396 454 285 9 6 437 6 450 1.63e-69 228
MS.gene97216.t1 AT1G05680 30.176 454 286 9 6 437 6 450 1.57e-66 219
MS.gene97216.t1 AT3G46670 30.989 455 268 13 10 438 13 447 4.01e-66 218
MS.gene97216.t1 AT1G22360 31.111 450 262 11 6 416 10 450 8.71e-64 213
MS.gene97216.t1 AT1G22400 31.166 446 258 12 5 410 12 448 3.41e-63 212
MS.gene97216.t1 AT3G46660 30.310 452 277 13 10 438 18 454 5.15e-63 211
MS.gene97216.t1 AT1G22370 31.235 413 253 9 2 384 9 420 1.67e-62 210
MS.gene97216.t1 AT1G78270 32.488 434 251 11 5 404 12 437 1.81e-62 210
MS.gene97216.t1 AT1G22360 31.336 434 254 10 6 400 10 438 2.63e-62 209
MS.gene97216.t1 AT1G22380 30.562 445 261 11 5 410 12 447 4.86e-61 206
MS.gene97216.t1 AT3G22250 28.571 448 278 11 5 421 7 443 4.35e-60 203
MS.gene97216.t1 AT1G22340 29.977 437 259 13 5 402 12 440 8.45e-59 200
MS.gene97216.t1 AT3G21560 28.511 470 287 13 5 436 11 469 1.12e-58 200
MS.gene97216.t1 AT3G55710 32.468 462 265 17 6 437 8 452 6.22e-58 197
MS.gene97216.t1 AT2G31750 29.630 459 278 10 8 437 10 452 1.61e-57 196
MS.gene97216.t1 AT5G59590 28.000 450 292 12 6 436 10 446 2.40e-57 195
MS.gene97216.t1 AT2G31750 29.630 459 278 10 8 437 10 452 3.40e-57 196
MS.gene97216.t1 AT2G43840 28.446 457 283 12 6 437 7 444 8.83e-56 191
MS.gene97216.t1 AT2G43840 28.446 457 283 12 6 437 7 444 2.39e-55 190
MS.gene97216.t1 AT5G59580 28.035 453 297 11 1 436 4 444 1.18e-54 188
MS.gene97216.t1 AT3G11340 30.155 451 283 11 5 438 8 443 2.33e-54 187
MS.gene97216.t1 AT3G55700 29.978 457 279 17 6 437 8 448 3.00e-53 185
MS.gene97216.t1 AT2G23260 28.698 453 291 12 6 437 10 451 5.26e-53 184
MS.gene97216.t1 AT4G15490 28.326 466 289 16 6 436 8 463 1.15e-52 184
MS.gene97216.t1 AT2G43820 28.855 454 285 12 6 437 7 444 1.74e-52 182
MS.gene97216.t1 AT5G38010 28.758 459 281 15 6 436 10 450 3.06e-52 182
MS.gene97216.t1 AT4G15500 27.623 467 290 15 4 436 7 459 6.94e-52 181
MS.gene97216.t1 AT3G46720 28.508 449 287 12 6 438 9 439 7.46e-52 181
MS.gene97216.t1 AT2G23250 30.090 442 275 13 15 437 7 433 1.21e-51 180
MS.gene97216.t1 AT4G15550 27.137 468 296 15 5 436 12 470 1.33e-51 181
MS.gene97216.t1 AT2G31790 28.132 455 296 9 6 437 8 454 2.33e-51 180
MS.gene97216.t1 AT5G38040 28.947 456 262 17 15 436 19 446 3.24e-51 179
MS.gene97216.t1 AT3G46680 29.399 449 288 14 6 436 9 446 8.70e-51 178
MS.gene97216.t1 AT5G05900 28.889 450 288 12 8 438 10 446 8.70e-51 178
MS.gene97216.t1 AT5G05880 28.289 456 284 14 8 438 10 447 1.57e-50 177
MS.gene97216.t1 AT3G46690 27.556 450 303 11 6 440 9 450 3.32e-50 176
MS.gene97216.t1 AT3G46700 27.679 448 292 12 6 436 9 441 6.19e-50 176
MS.gene97216.t1 AT1G05560 27.887 459 290 14 5 436 4 448 6.53e-50 176
MS.gene97216.t1 AT1G05560 27.887 459 290 14 5 436 54 498 1.47e-49 176
MS.gene97216.t1 AT4G15480 27.564 468 291 15 6 436 19 475 1.04e-48 173
MS.gene97216.t1 AT3G46650 28.217 443 281 14 6 435 10 428 1.05e-48 172
MS.gene97216.t1 AT2G15480 28.279 488 281 15 6 440 10 481 1.99e-48 172
MS.gene97216.t1 AT2G15490 29.098 488 277 16 6 440 7 478 3.42e-48 172
MS.gene97216.t1 AT5G05870 27.983 461 281 16 8 436 10 451 1.17e-47 170
MS.gene97216.t1 AT2G15490 28.862 492 276 16 6 440 7 481 2.74e-47 169
MS.gene97216.t1 AT4G14090 27.333 450 300 12 5 436 12 452 9.24e-47 167
MS.gene97216.t1 AT5G05860 28.698 453 278 15 8 435 11 443 1.09e-46 167
MS.gene97216.t1 AT2G26480 27.069 447 283 14 8 431 10 436 3.00e-46 166
MS.gene97216.t1 AT2G15480 27.309 498 283 15 6 440 10 491 4.62e-46 166
MS.gene97216.t1 AT2G36800 28.395 486 272 19 6 432 12 480 7.60e-46 166
MS.gene97216.t1 AT5G05890 28.139 462 281 14 8 438 10 451 7.55e-45 162
MS.gene97216.t1 AT2G36970 25.966 466 306 11 5 437 9 468 1.28e-44 162
MS.gene97216.t1 AT1G05530 27.766 461 291 14 5 436 4 451 2.29e-44 161
MS.gene97216.t1 AT3G53160 27.310 487 283 17 6 436 8 479 4.73e-44 160
MS.gene97216.t1 AT1G01420 27.872 470 290 15 2 434 4 461 5.19e-44 160
MS.gene97216.t1 AT1G01420 27.872 470 290 15 2 434 7 464 6.56e-44 160
MS.gene97216.t1 AT4G34138 27.743 483 279 17 6 436 11 475 7.31e-44 160
MS.gene97216.t1 AT4G01070 27.434 452 273 13 5 417 7 442 6.46e-43 157
MS.gene97216.t1 AT4G34131 27.406 478 289 15 6 436 10 476 8.13e-43 157
MS.gene97216.t1 AT2G36770 25.410 488 291 17 6 436 14 485 3.04e-42 156
MS.gene97216.t1 AT2G36750 27.686 484 276 17 6 432 10 476 7.97e-42 155
MS.gene97216.t1 AT2G36780 26.186 485 283 16 6 432 14 481 1.03e-41 154
MS.gene97216.t1 AT2G30150 26.915 457 288 14 6 436 13 449 1.14e-41 154
MS.gene97216.t1 AT2G30140 27.253 455 288 13 6 436 13 448 4.56e-41 152
MS.gene97216.t1 AT4G34135 27.292 480 288 16 6 436 11 478 1.09e-40 151
MS.gene97216.t1 AT2G36760 24.797 492 281 15 6 432 14 481 3.72e-40 150
MS.gene97216.t1 AT2G30140 27.352 457 284 14 6 436 13 447 3.98e-40 149
MS.gene97216.t1 AT1G22370 39.247 186 99 3 213 384 65 250 4.22e-40 146
MS.gene97216.t1 AT2G30150 26.711 453 286 14 10 436 1 433 5.31e-40 149
MS.gene97216.t1 AT3G16520 27.248 367 245 8 91 439 98 460 1.00e-39 148
MS.gene97216.t1 AT2G28080 27.586 464 282 19 10 436 22 468 1.20e-39 149
MS.gene97216.t1 AT2G36790 26.915 483 282 16 6 432 13 480 4.18e-39 147
MS.gene97216.t1 AT1G24100 26.737 475 274 17 6 436 11 455 6.34e-39 146
MS.gene97216.t1 AT5G66690 27.234 470 285 14 5 432 6 460 8.50e-39 146
MS.gene97216.t1 AT1G73880 27.660 470 281 13 6 436 14 463 1.03e-38 146
MS.gene97216.t1 AT3G16520 27.485 342 227 7 91 415 98 435 3.15e-38 144
MS.gene97216.t1 AT3G16520 27.485 342 227 7 91 415 98 435 4.18e-38 144
MS.gene97216.t1 AT5G26310 26.834 477 275 17 5 431 6 458 5.96e-38 144
MS.gene97216.t1 AT1G01390 26.889 450 278 14 5 417 7 442 1.97e-37 142
MS.gene97216.t1 AT1G01390 26.889 450 278 14 5 417 24 459 2.07e-37 142
MS.gene97216.t1 AT3G50740 27.122 483 281 17 5 435 6 469 1.23e-36 140
MS.gene97216.t1 AT3G21790 24.101 473 308 12 10 436 8 475 3.33e-36 139
MS.gene97216.t1 AT2G29750 25.265 471 304 11 6 436 8 470 1.47e-35 137
MS.gene97216.t1 AT5G17050 24.779 452 309 14 6 436 12 453 2.33e-35 136
MS.gene97216.t1 AT2G16890 24.839 467 289 12 6 429 9 456 1.46e-34 134
MS.gene97216.t1 AT2G16890 25.057 435 267 11 6 400 9 424 2.07e-34 133
MS.gene97216.t1 AT3G53150 26.429 420 251 11 6 381 22 427 4.93e-34 134
MS.gene97216.t1 AT5G49690 26.739 460 290 17 6 436 10 451 6.93e-34 132
MS.gene97216.t1 AT3G21760 23.992 471 313 10 10 436 8 477 8.15e-34 132
MS.gene97216.t1 AT4G15260 25.641 351 222 9 119 436 7 351 8.34e-34 130
MS.gene97216.t1 AT5G14860 26.180 466 278 15 6 427 8 451 1.13e-33 132
MS.gene97216.t1 AT3G21800 21.941 474 313 11 10 436 9 472 1.90e-33 131
MS.gene97216.t1 AT2G29740 24.684 474 304 11 6 436 8 471 2.98e-33 130
MS.gene97216.t1 AT3G21750 21.702 470 313 12 10 436 8 465 6.79e-33 130
MS.gene97216.t1 AT4G15280 23.256 473 307 14 10 436 8 470 7.22e-33 130
MS.gene97216.t1 AT4G15280 23.256 473 307 14 10 436 40 502 1.04e-32 130
MS.gene97216.t1 AT1G07250 25.641 468 301 13 10 437 10 470 4.96e-32 127
MS.gene97216.t1 AT3G21780 23.478 460 317 10 10 436 8 465 8.58e-32 127
MS.gene97216.t1 AT5G37950 26.685 356 228 10 21 356 1 343 6.54e-31 122
MS.gene97216.t1 AT5G37950 26.496 351 229 10 21 356 1 337 9.59e-31 121
MS.gene97216.t1 AT4G36770 27.097 465 281 19 6 430 4 450 1.07e-30 123
MS.gene97216.t1 AT1G30530 24.545 440 301 13 12 435 19 443 1.11e-30 123
MS.gene97216.t1 AT2G18570 23.673 452 286 13 5 415 4 437 2.17e-30 122
MS.gene97216.t1 AT2G18560 31.760 233 131 8 228 440 150 374 1.42e-29 119
MS.gene97216.t1 AT5G12890 24.330 485 303 15 6 439 10 481 1.89e-29 120
MS.gene97216.t1 AT2G29710 31.048 248 149 7 208 436 215 459 2.71e-29 119
MS.gene97216.t1 AT5G17040 29.493 217 144 4 225 436 122 334 9.68e-29 115
MS.gene97216.t1 AT5G65550 24.249 433 285 13 6 408 9 428 1.26e-28 117
MS.gene97216.t1 AT1G10400 25.474 475 290 18 6 437 7 460 2.34e-28 117
MS.gene97216.t1 AT5G17040 29.493 217 144 4 225 436 224 436 2.60e-28 116
MS.gene97216.t1 AT1G07260 22.894 463 317 11 10 436 10 468 3.19e-28 116
MS.gene97216.t1 AT5G03490 23.516 455 312 13 5 436 18 459 3.98e-28 116
MS.gene97216.t1 AT2G29730 23.667 469 298 17 10 436 9 459 4.02e-28 116
MS.gene97216.t1 AT5G17030 24.651 430 295 12 6 417 12 430 1.50e-27 114
MS.gene97216.t1 AT5G54010 25.176 425 282 13 1 406 1 408 2.87e-26 110
MS.gene97216.t1 AT1G51210 25.287 435 282 14 5 417 19 432 3.66e-26 110
MS.gene97216.t1 AT1G07240 22.601 469 316 14 10 436 9 472 1.67e-25 108
MS.gene97216.t1 AT4G27570 25.420 417 281 16 2 402 3 405 2.81e-25 107
MS.gene97216.t1 AT4G27560 23.721 430 295 15 2 413 3 417 1.52e-24 105
MS.gene97216.t1 AT5G53990 24.769 432 269 18 1 406 1 402 2.20e-24 105
MS.gene97216.t1 AT1G06000 24.094 469 274 17 5 437 9 431 7.48e-24 103
MS.gene97216.t1 AT2G22930 22.768 448 310 11 6 436 6 434 1.50e-23 102
MS.gene97216.t1 AT1G50580 25.893 448 307 14 1 436 1 435 1.73e-23 102
MS.gene97216.t1 AT3G29630 25.607 453 304 18 1 436 1 437 9.87e-22 97.4
MS.gene97216.t1 AT1G64910 24.344 419 280 18 1 402 1 399 5.10e-21 95.5
MS.gene97216.t1 AT2G22590 23.128 454 284 17 6 417 15 445 1.79e-20 94.0
MS.gene97216.t1 AT1G64920 23.529 425 272 14 1 398 1 399 2.02e-20 93.6
MS.gene97216.t1 AT4G09500 24.471 425 279 14 6 410 6 408 3.07e-20 93.2
MS.gene97216.t1 AT3G29630 29.016 193 130 5 251 436 219 411 1.04e-19 91.3
MS.gene97216.t1 AT4G09500 24.048 420 262 13 6 410 6 383 1.14e-19 91.3
MS.gene97216.t1 AT5G54060 25.641 429 268 18 11 406 18 428 4.29e-19 89.7
MS.gene97216.t1 AT4G01070 27.692 325 195 12 5 305 7 315 5.35e-19 88.2
MS.gene97216.t1 AT2G23210 25.735 272 164 10 6 256 10 264 3.26e-15 76.3
MS.gene97216.t1 AT4G34135 23.284 335 210 11 6 304 11 334 1.72e-13 71.6

Find 109 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGATGCAAACTTTAAATTT+TGG 0.146513 7.3:+84380056 MS.gene97216:CDS
TATTATTGTTACATTTAATA+TGG 0.157168 7.3:+84378907 MS.gene97216:CDS
CTTGGAAGTGGGCAACAATT+TGG 0.205368 7.3:+84378937 MS.gene97216:CDS
CTAGGGCTAGTTCATTAAAT+TGG 0.232886 7.3:-84380292 None:intergenic
AGAAATTGATCAATTGAAAA+TGG 0.246281 7.3:-84380542 None:intergenic
TTACTTCCATGGAAATCATT+AGG 0.251367 7.3:-84380389 None:intergenic
TCGCCCAACTAATAAACTTT+TGG 0.254931 7.3:-84380763 None:intergenic
ATATGTTTCCTTTGGTAGTA+TGG 0.280834 7.3:+84380253 MS.gene97216:CDS
ATATCACTTCTATCATCTTC+AGG 0.282907 7.3:-84378785 None:intergenic
ACAACAACAAAAGCTCATTT+TGG 0.298719 7.3:+84380174 MS.gene97216:CDS
GTGTCCATCATAGGTATATC+AGG 0.307459 7.3:-84379978 None:intergenic
TACTTCCATGGAAATCATTA+GGG 0.333367 7.3:-84380388 None:intergenic
AGTGACTTTGCAACCATGTT+TGG 0.348198 7.3:-84378669 None:intergenic
TTGGAAGTGGGCAACAATTT+GGG 0.348517 7.3:+84378938 MS.gene97216:CDS
CTAGTTCATTAAATTGGTTT+TGG 0.358155 7.3:-84380286 None:intergenic
TTAACTTCTTCTATAAGCTT+TGG 0.364725 7.3:-84378854 None:intergenic
AAGATACAACTTGCTTAGAT+TGG 0.366197 7.3:+84380201 MS.gene97216:CDS
ACATGTCCTTGAACTGGATA+TGG 0.367225 7.3:-84378614 None:intergenic
ATCCCATCTTCAATAAGTTT+AGG 0.371481 7.3:-84379022 None:intergenic
ATTTAATATGGGTTGGGCCT+TGG 0.371850 7.3:+84378919 MS.gene97216:CDS
AAGTTTGTTGTGTCCATCAT+AGG 0.375882 7.3:-84379987 None:intergenic
CCTACCAATTGGTCCATTGA+TGG 0.377369 7.3:+84380145 MS.gene97216:CDS
TCTCCAAAAGTTTATTAGTT+GGG 0.379670 7.3:+84380760 MS.gene97216:CDS
ACCAGCATGTACACCTTCTA+TGG 0.381997 7.3:-84380501 None:intergenic
TCTTCAGGTTCCAACCCATC+TGG 0.388496 7.3:-84378770 None:intergenic
TGTTACATTTAATATGGGTT+GGG 0.391046 7.3:+84378913 MS.gene97216:CDS
TTGTTGTTACTTTCCATCAA+TGG 0.392206 7.3:-84380158 None:intergenic
ATAAGCTTTGGAAGTCTAGT+AGG 0.397645 7.3:-84378842 None:intergenic
AACTATAAACGATCGAAAAC+CGG 0.398350 7.3:+84378710 MS.gene97216:CDS
ATCTCCAAAAGTTTATTAGT+TGG 0.404458 7.3:+84380759 MS.gene97216:CDS
GAATTAGAGAAAGATGATAA+TGG 0.409630 7.3:+84380605 MS.gene97216:CDS
ATTATTGTTACATTTAATAT+GGG 0.411868 7.3:+84378908 MS.gene97216:CDS
CTGGTGTACCTTTCTTGTGT+TGG 0.414146 7.3:+84380519 MS.gene97216:CDS
TCCAGCTTCTGCCACTACTT+TGG 0.416978 7.3:+84378982 MS.gene97216:CDS
CTTTGGTAGTATGGTAGTAA+TGG 0.420468 7.3:+84380262 MS.gene97216:CDS
TATGGGTTGGGCCTTGGAAG+TGG 0.420744 7.3:+84378925 MS.gene97216:CDS
TAAAGGTAAAATTGTAGGTT+GGG 0.425333 7.3:+84380409 MS.gene97216:CDS
TTTGTCATATATGTTTCCTT+TGG 0.426065 7.3:+84380245 MS.gene97216:CDS
ATTTGTGATGTGTGGAAGAC+TGG 0.430215 7.3:+84380578 MS.gene97216:CDS
CAAATTGTTGCCCACTTCCA+AGG 0.439841 7.3:-84378936 None:intergenic
TTGTTACATTTAATATGGGT+TGG 0.444713 7.3:+84378912 MS.gene97216:CDS
AGTTGGTGATAATGACATAA+AGG 0.445350 7.3:+84380670 MS.gene97216:CDS
CTTTCCATCAATGGACCAAT+TGG 0.450743 7.3:-84380149 None:intergenic
GGAAGTAAAGGTAAAATTGT+AGG 0.452513 7.3:+84380404 MS.gene97216:CDS
GATTTGTGAGAATTGCATAA+GGG 0.455063 7.3:-84378642 None:intergenic
GGGTTAACATGTCCTTGAAC+TGG 0.455156 7.3:-84378620 None:intergenic
GGATGGAATTCTACCATAGA+AGG 0.456157 7.3:+84380488 MS.gene97216:CDS
CTCCCCTGATATACCTATGA+TGG 0.458771 7.3:+84379974 MS.gene97216:CDS
GGACCAATTGGTAGGAACTT+TGG 0.458930 7.3:-84380137 None:intergenic
GCTATACCATATCCAGTTCA+AGG 0.464953 7.3:+84378608 MS.gene97216:CDS
ATGATAATGGATTTATATCA+AGG 0.465504 7.3:+84380618 MS.gene97216:CDS
ATACCTAAACTTATTGAAGA+TGG 0.468134 7.3:+84379019 MS.gene97216:CDS
TTTACCTTCTTGTCATTACT+AGG 0.475931 7.3:-84380356 None:intergenic
GCCAAAGTAGTGGCAGAAGC+TGG 0.476655 7.3:-84378983 None:intergenic
AATGATTTCCATGGAAGTAA+AGG 0.480314 7.3:+84380392 MS.gene97216:CDS
TCACCAAAGTTCCTACCAAT+TGG 0.485412 7.3:+84380134 MS.gene97216:CDS
TGTCAAGAAGATCAAGTCCT+AGG 0.486727 7.3:-84380310 None:intergenic
GTAAAGGTAAAATTGTAGGT+TGG 0.486757 7.3:+84380408 MS.gene97216:CDS
CACTTGTATCTTGTCTTGCT+CGG 0.488719 7.3:-84378738 None:intergenic
ACTATTAATAATATAGAAGA+AGG 0.495893 7.3:+84380719 MS.gene97216:CDS
TACCTAAACTTATTGAAGAT+GGG 0.498856 7.3:+84379020 MS.gene97216:CDS
AAGAAGGTGGATCAAGTAGT+TGG 0.501502 7.3:+84380653 MS.gene97216:CDS
GGCAACAATTTGGGAATCAA+AGG 0.501921 7.3:+84378947 MS.gene97216:CDS
CTTTGCAACCATGTTTGGCT+AGG 0.507069 7.3:-84378664 None:intergenic
GGATTTGTGAGAATTGCATA+AGG 0.513250 7.3:-84378643 None:intergenic
CTTATGAAGCAAGCAATGGC+TGG 0.514750 7.3:-84380458 None:intergenic
GAAACATATATGACAAATTG+AGG 0.516237 7.3:-84380239 None:intergenic
GGACGAACAACCCAAAGAAA+AGG 0.516602 7.3:-84380335 None:intergenic
GCATACCCTAATGATTTCCA+TGG 0.524493 7.3:+84380383 MS.gene97216:CDS
ATGGGTTGGGCCTTGGAAGT+GGG 0.539774 7.3:+84378926 MS.gene97216:CDS
GATGGGATTATTGATTCTGA+AGG 0.541173 7.3:+84379037 MS.gene97216:CDS
GAAAATGGCCAACACAAGAA+AGG 0.544637 7.3:-84380527 None:intergenic
CTTGTCTTGCTCGGAAACAC+CGG 0.544929 7.3:-84378729 None:intergenic
TGGTAGGAACTTTGGTGACA+TGG 0.547060 7.3:-84380129 None:intergenic
CTTCAGGTTCCAACCCATCT+GGG 0.550389 7.3:-84378769 None:intergenic
TTATATCAAGGCAAGAGATA+AGG 0.554655 7.3:+84380630 MS.gene97216:CDS
GCTTCATAAGTCATTGTGGA+TGG 0.554894 7.3:+84380471 MS.gene97216:CDS
ACAACAAACTTTCCATGGCA+TGG 0.559550 7.3:+84379999 MS.gene97216:CDS
TTTGGAGATTATGTGATGAC+TGG 0.561048 7.3:-84380745 None:intergenic
TATGGTATAGCAAGAAAATG+AGG 0.561256 7.3:-84378596 None:intergenic
ACCATAGAAGGTGTACATGC+TGG 0.563487 7.3:+84380500 MS.gene97216:CDS
ACTGCTTATGATCTTGAGCC+TGG 0.563828 7.3:+84380098 MS.gene97216:CDS
AAGGCAAGAGATAAGGAAGA+AGG 0.565891 7.3:+84380637 MS.gene97216:CDS
GCAACAATTTGGGAATCAAA+GGG 0.572030 7.3:+84378948 MS.gene97216:CDS
TGTCCATCATAGGTATATCA+GGG 0.572365 7.3:-84379977 None:intergenic
TGAAGCAAGCAATGGCTGGA+TGG 0.573516 7.3:-84380454 None:intergenic
CCATCAATGGACCAATTGGT+AGG 0.574039 7.3:-84380145 None:intergenic
GGTGACACTCCCAGATGGGT+TGG 0.576366 7.3:+84378760 MS.gene97216:CDS
CTTTGGAAGTCTAGTAGGCA+TGG 0.581752 7.3:-84378837 None:intergenic
GTCAAGAAGATCAAGTCCTA+GGG 0.586434 7.3:-84380309 None:intergenic
TGGACACAACAAACTTTCCA+TGG 0.588818 7.3:+84379994 MS.gene97216:CDS
AATCATATATTTGTGATGTG+TGG 0.589638 7.3:+84380570 MS.gene97216:CDS
CAATTTAATGAACTAGCCCT+AGG 0.592472 7.3:+84380293 MS.gene97216:CDS
CATTACTACCATACTACCAA+AGG 0.593449 7.3:-84380261 None:intergenic
TCGTCCTAGTAATGACAAGA+AGG 0.594908 7.3:+84380352 MS.gene97216:CDS
ATTTGTGAGAATTGCATAAG+GGG 0.600633 7.3:-84378641 None:intergenic
CAAGTGGTGACACTCCCAGA+TGG 0.604036 7.3:+84378755 MS.gene97216:CDS
TTTGTGAGAATTGCATAAGG+GGG 0.606379 7.3:-84378640 None:intergenic
AAGTGGTGACACTCCCAGAT+GGG 0.610837 7.3:+84378756 MS.gene97216:CDS
GACAGCACATGCCAAAGTAG+TGG 0.615295 7.3:-84378993 None:intergenic
ATTAATAATATAGAAGAAGG+TGG 0.620062 7.3:+84380722 MS.gene97216:CDS
TCACAAATCCTAGCCAAACA+TGG 0.621146 7.3:+84378656 MS.gene97216:CDS
GCAAGAGATAAGGAAGAAGG+TGG 0.626801 7.3:+84380640 MS.gene97216:CDS
GCTTGCTTCATAAGTCATTG+TGG 0.630073 7.3:+84380467 MS.gene97216:CDS
ATGACTTATGAAGCAAGCAA+TGG 0.646585 7.3:-84380462 None:intergenic
GGTGACATGGAAAATACACC+AGG 0.649715 7.3:-84380116 None:intergenic
CGAGCAAGACAAGATACAAG+TGG 0.649951 7.3:+84378739 MS.gene97216:CDS
CAACAATTTGGGAATCAAAG+GGG 0.665773 7.3:+84378949 MS.gene97216:CDS
GTCCATCATAGGTATATCAG+GGG 0.691231 7.3:-84379976 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTGTTACATTTAATAT+GGG + chr7.3:84378908-84378927 MS.gene97216:CDS 10.0%
!! TATTATTGTTACATTTAATA+TGG + chr7.3:84378907-84378926 MS.gene97216:CDS 10.0%
!!! AATTTCACAATTAAATTTTT+TGG + chr7.3:84379082-84379101 MS.gene97216:intron 10.0%
!! ACTATTAATAATATAGAAGA+AGG + chr7.3:84380719-84380738 MS.gene97216:CDS 15.0%
!! ATATTGAAGAAAGAAAAAAA+AGG + chr7.3:84379606-84379625 MS.gene97216:intron 15.0%
!!! CAACTTTTCTTATTTATTTA+AGG + chr7.3:84379164-84379183 MS.gene97216:intron 15.0%
!! AAACTACATCTACTATTTAA+TGG + chr7.3:84379764-84379783 MS.gene97216:intron 20.0%
!! AGAAATTGATCAATTGAAAA+TGG - chr7.3:84380545-84380564 None:intergenic 20.0%
!! ATTAATAATATAGAAGAAGG+TGG + chr7.3:84380722-84380741 MS.gene97216:CDS 20.0%
!! CATCAAATTTATATTCAGAA+AGG + chr7.3:84379553-84379572 MS.gene97216:intron 20.0%
!! GTTAAGTGATTATACAATTT+GGG + chr7.3:84379517-84379536 MS.gene97216:intron 20.0%
!! TTAAGTGATTATACAATTTG+GGG + chr7.3:84379518-84379537 MS.gene97216:intron 20.0%
!!! AAACTTTAAATTTTGGAGAA+TGG + chr7.3:84380063-84380082 MS.gene97216:CDS 20.0%
!!! ATGATAATGGATTTATATCA+AGG + chr7.3:84380618-84380637 MS.gene97216:CDS 20.0%
!!! ATGTTTTTTTCTTATTTGAG+TGG + chr7.3:84379634-84379653 MS.gene97216:intron 20.0%
!!! GATTTGAATTTCTTGTTTTT+TGG - chr7.3:84379955-84379974 None:intergenic 20.0%
!!! TGTTTTTTTCTTATTTGAGT+GGG + chr7.3:84379635-84379654 MS.gene97216:intron 20.0%
!!! TTAGAAAGCTATTTCATTAA+AGG - chr7.3:84379489-84379508 None:intergenic 20.0%
! AAATAGCTTTCTAAATTGAC+TGG + chr7.3:84379495-84379514 MS.gene97216:intron 25.0%
! AATCATATATTTGTGATGTG+TGG + chr7.3:84380570-84380589 MS.gene97216:CDS 25.0%
! ATACCTAAACTTATTGAAGA+TGG + chr7.3:84379019-84379038 MS.gene97216:CDS 25.0%
! ATCTCCAAAAGTTTATTAGT+TGG + chr7.3:84380759-84380778 MS.gene97216:CDS 25.0%
! GAAACATATATGACAAATTG+AGG - chr7.3:84380242-84380261 None:intergenic 25.0%
! GAATTAGAGAAAGATGATAA+TGG + chr7.3:84380605-84380624 MS.gene97216:CDS 25.0%
! GGTTAAGTGATTATACAATT+TGG + chr7.3:84379516-84379535 MS.gene97216:intron 25.0%
! GTTATTACTTGAGTGAATTA+AGG - chr7.3:84379743-84379762 None:intergenic 25.0%
! TAAAGGTAAAATTGTAGGTT+GGG + chr7.3:84380409-84380428 MS.gene97216:CDS 25.0%
! TAAGTGATTATACAATTTGG+GGG + chr7.3:84379519-84379538 MS.gene97216:intron 25.0%
! TACCTAAACTTATTGAAGAT+GGG + chr7.3:84379020-84379039 MS.gene97216:CDS 25.0%
! TCTCCAAAAGTTTATTAGTT+GGG + chr7.3:84380760-84380779 MS.gene97216:CDS 25.0%
! TGTTACATTTAATATGGGTT+GGG + chr7.3:84378913-84378932 MS.gene97216:CDS 25.0%
! TTAACTTCTTCTATAAGCTT+TGG - chr7.3:84378857-84378876 None:intergenic 25.0%
! TTGTTACATTTAATATGGGT+TGG + chr7.3:84378912-84378931 MS.gene97216:CDS 25.0%
! TTTGTCATATATGTTTCCTT+TGG + chr7.3:84380245-84380264 MS.gene97216:CDS 25.0%
!! AATATTTCATGATCTCGTTT+TGG + chr7.3:84379912-84379931 MS.gene97216:intron 25.0%
!! GAGATGCAAACTTTAAATTT+TGG + chr7.3:84380056-84380075 MS.gene97216:CDS 25.0%
!! TGGTTCAATATTTTACTTTG+TGG - chr7.3:84380437-84380456 None:intergenic 25.0%
!!! CTAGTTCATTAAATTGGTTT+TGG - chr7.3:84380289-84380308 None:intergenic 25.0%
!!! GTTTTTTTCTTATTTGAGTG+GGG + chr7.3:84379636-84379655 MS.gene97216:intron 25.0%
!!! TGAATTTCTTGTTTTTTGGT+GGG - chr7.3:84379951-84379970 None:intergenic 25.0%
!!! TTGAATTTCTTGTTTTTTGG+TGG - chr7.3:84379952-84379971 None:intergenic 25.0%
!!! TTTTTTTCTTATTTGAGTGG+GGG + chr7.3:84379637-84379656 MS.gene97216:intron 25.0%
AACTATAAACGATCGAAAAC+CGG + chr7.3:84378710-84378729 MS.gene97216:CDS 30.0%
AATGATTTCCATGGAAGTAA+AGG + chr7.3:84380392-84380411 MS.gene97216:CDS 30.0%
ATATCACTTCTATCATCTTC+AGG - chr7.3:84378788-84378807 None:intergenic 30.0%
ATCCCATCTTCAATAAGTTT+AGG - chr7.3:84379025-84379044 None:intergenic 30.0%
ATTTGTGAGAATTGCATAAG+GGG - chr7.3:84378644-84378663 None:intergenic 30.0%
GAGAGATGAAATTTACCAAA+CGG + chr7.3:84379381-84379400 MS.gene97216:intron 30.0%
GATTTGTGAGAATTGCATAA+GGG - chr7.3:84378645-84378664 None:intergenic 30.0%
GGAAGTAAAGGTAAAATTGT+AGG + chr7.3:84380404-84380423 MS.gene97216:CDS 30.0%
GGAATAGAATTACATAAAGC+TGG + chr7.3:84379103-84379122 MS.gene97216:intron 30.0%
GTAAAGGTAAAATTGTAGGT+TGG + chr7.3:84380408-84380427 MS.gene97216:CDS 30.0%
TACTTCCATGGAAATCATTA+GGG - chr7.3:84380391-84380410 None:intergenic 30.0%
TATGGTATAGCAAGAAAATG+AGG - chr7.3:84378599-84378618 None:intergenic 30.0%
TTACTTCCATGGAAATCATT+AGG - chr7.3:84380392-84380411 None:intergenic 30.0%
TTATATCAAGGCAAGAGATA+AGG + chr7.3:84380630-84380649 MS.gene97216:CDS 30.0%
TTCTTTCTTCAATATGCGTT+TGG - chr7.3:84379601-84379620 None:intergenic 30.0%
TTTACCTTCTTGTCATTACT+AGG - chr7.3:84380359-84380378 None:intergenic 30.0%
! AAGATACAACTTGCTTAGAT+TGG + chr7.3:84380201-84380220 MS.gene97216:CDS 30.0%
! ACAACAACAAAAGCTCATTT+TGG + chr7.3:84380174-84380193 MS.gene97216:CDS 30.0%
! ATATGTTTCCTTTGGTAGTA+TGG + chr7.3:84380253-84380272 MS.gene97216:CDS 30.0%
! CAATTTTACCTTTACTTCCA+TGG - chr7.3:84380403-84380422 None:intergenic 30.0%
! TACTATTTAATGGACACACT+TGG + chr7.3:84379774-84379793 MS.gene97216:intron 30.0%
! TCTTTTGTTACTAGTTGTTG+AGG + chr7.3:84379853-84379872 MS.gene97216:intron 30.0%
!! AGTTGGTGATAATGACATAA+AGG + chr7.3:84380670-84380689 MS.gene97216:CDS 30.0%
!! CTTTAAATTTTGGAGAATGG+TGG + chr7.3:84380066-84380085 MS.gene97216:CDS 30.0%
!! TTGTTGTTACTTTCCATCAA+TGG - chr7.3:84380161-84380180 None:intergenic 30.0%
ATGACTTATGAAGCAAGCAA+TGG - chr7.3:84380465-84380484 None:intergenic 35.0%
CAACAATTTGGGAATCAAAG+GGG + chr7.3:84378949-84378968 MS.gene97216:CDS 35.0%
CAATTTAATGAACTAGCCCT+AGG + chr7.3:84380293-84380312 MS.gene97216:CDS 35.0%
CATTACTACCATACTACCAA+AGG - chr7.3:84380264-84380283 None:intergenic 35.0%
GCAACAATTTGGGAATCAAA+GGG + chr7.3:84378948-84378967 MS.gene97216:CDS 35.0%
GGATTTGTGAGAATTGCATA+AGG - chr7.3:84378646-84378665 None:intergenic 35.0%
GTGGGAAATAGGAAAACAAA+TGG + chr7.3:84379432-84379451 MS.gene97216:intron 35.0%
TGTCCATCATAGGTATATCA+GGG - chr7.3:84379980-84379999 None:intergenic 35.0%
TTTGGAGATTATGTGATGAC+TGG - chr7.3:84380748-84380767 None:intergenic 35.0%
TTTGTGAGAATTGCATAAGG+GGG - chr7.3:84378643-84378662 None:intergenic 35.0%
! CTTTGGTAGTATGGTAGTAA+TGG + chr7.3:84380262-84380281 MS.gene97216:CDS 35.0%
! TCGCCCAACTAATAAACTTT+TGG - chr7.3:84380766-84380785 None:intergenic 35.0%
! TCTTGACAAGCCTTTTCTTT+GGG + chr7.3:84380325-84380344 MS.gene97216:CDS 35.0%
! TTCTTGACAAGCCTTTTCTT+TGG + chr7.3:84380324-84380343 MS.gene97216:CDS 35.0%
!! AAGTTTGTTGTGTCCATCAT+AGG - chr7.3:84379990-84380009 None:intergenic 35.0%
!! ATAAGCTTTGGAAGTCTAGT+AGG - chr7.3:84378845-84378864 None:intergenic 35.0%
!! CTAGGGCTAGTTCATTAAAT+TGG - chr7.3:84380295-84380314 None:intergenic 35.0%
!! GATGGGATTATTGATTCTGA+AGG + chr7.3:84379037-84379056 MS.gene97216:CDS 35.0%
!!! GGGGTGGGTATATTTTTTTT+AGG + chr7.3:84379656-84379675 MS.gene97216:intron 35.0%
AAGAAGGTGGATCAAGTAGT+TGG + chr7.3:84380653-84380672 MS.gene97216:CDS 40.0%
AAGGCAAGAGATAAGGAAGA+AGG + chr7.3:84380637-84380656 MS.gene97216:CDS 40.0%
ACAACAAACTTTCCATGGCA+TGG + chr7.3:84379999-84380018 MS.gene97216:CDS 40.0%
ACATGTCCTTGAACTGGATA+TGG - chr7.3:84378617-84378636 None:intergenic 40.0%
AGTGACTTTGCAACCATGTT+TGG - chr7.3:84378672-84378691 None:intergenic 40.0%
ATTTGTGATGTGTGGAAGAC+TGG + chr7.3:84380578-84380597 MS.gene97216:CDS 40.0%
CAAATTCAAACGACACCGTT+TGG - chr7.3:84379399-84379418 None:intergenic 40.0%
CACTTGTATCTTGTCTTGCT+CGG - chr7.3:84378741-84378760 None:intergenic 40.0%
CTTTCCATCAATGGACCAAT+TGG - chr7.3:84380152-84380171 None:intergenic 40.0%
GAAAATGGCCAACACAAGAA+AGG - chr7.3:84380530-84380549 None:intergenic 40.0%
GCATACCCTAATGATTTCCA+TGG + chr7.3:84380383-84380402 MS.gene97216:CDS 40.0%
GCTATACCATATCCAGTTCA+AGG + chr7.3:84378608-84378627 MS.gene97216:CDS 40.0%
GCTTCATAAGTCATTGTGGA+TGG + chr7.3:84380471-84380490 MS.gene97216:CDS 40.0%
GCTTGCTTCATAAGTCATTG+TGG + chr7.3:84380467-84380486 MS.gene97216:CDS 40.0%
GGATGGAATTCTACCATAGA+AGG + chr7.3:84380488-84380507 MS.gene97216:CDS 40.0%
GGCAACAATTTGGGAATCAA+AGG + chr7.3:84378947-84378966 MS.gene97216:CDS 40.0%
GGCAACATAATTTCAAGCTC+AGG + chr7.3:84379874-84379893 MS.gene97216:intron 40.0%
GTCAAGAAGATCAAGTCCTA+GGG - chr7.3:84380312-84380331 None:intergenic 40.0%
GTCCATCATAGGTATATCAG+GGG - chr7.3:84379979-84379998 None:intergenic 40.0%
GTGATTATACAATTTGGGGG+TGG + chr7.3:84379522-84379541 MS.gene97216:intron 40.0%
GTGTCCATCATAGGTATATC+AGG - chr7.3:84379981-84380000 None:intergenic 40.0%
TCACAAATCCTAGCCAAACA+TGG + chr7.3:84378656-84378675 MS.gene97216:CDS 40.0%
TCACCAAAGTTCCTACCAAT+TGG + chr7.3:84380134-84380153 MS.gene97216:CDS 40.0%
TCGTCCTAGTAATGACAAGA+AGG + chr7.3:84380352-84380371 MS.gene97216:CDS 40.0%
TGGACACAACAAACTTTCCA+TGG + chr7.3:84379994-84380013 MS.gene97216:CDS 40.0%
TGTCAAGAAGATCAAGTCCT+AGG - chr7.3:84380313-84380332 None:intergenic 40.0%
TTGGAAGTGGGCAACAATTT+GGG + chr7.3:84378938-84378957 MS.gene97216:CDS 40.0%
TTTCCTATTTCCCACAACAG+AGG - chr7.3:84379427-84379446 None:intergenic 40.0%
! ATTTTATCTACGCCATGCCA+TGG - chr7.3:84380014-84380033 None:intergenic 40.0%
! TTTCTTATTTGAGTGGGGGT+GGG + chr7.3:84379641-84379660 MS.gene97216:intron 40.0%
!! ATTTAATATGGGTTGGGCCT+TGG + chr7.3:84378919-84378938 MS.gene97216:CDS 40.0%
!! TTTTCTTATTTGAGTGGGGG+TGG + chr7.3:84379640-84379659 MS.gene97216:intron 40.0%
!!! TTTTTTAGGCCCAGAGCTTT+TGG + chr7.3:84379670-84379689 MS.gene97216:intron 40.0%
AATTTGTCGCTCCTCTGTTG+TGG + chr7.3:84379413-84379432 MS.gene97216:intron 45.0%
ACCAGCATGTACACCTTCTA+TGG - chr7.3:84380504-84380523 None:intergenic 45.0%
ACTGCTTATGATCTTGAGCC+TGG + chr7.3:84380098-84380117 MS.gene97216:CDS 45.0%
ATTTGTCGCTCCTCTGTTGT+GGG + chr7.3:84379414-84379433 MS.gene97216:intron 45.0%
CAAATTGTTGCCCACTTCCA+AGG - chr7.3:84378939-84378958 None:intergenic 45.0%
CCATCAATGGACCAATTGGT+AGG - chr7.3:84380148-84380167 None:intergenic 45.0%
CCTACCAATTGGTCCATTGA+TGG + chr7.3:84380145-84380164 MS.gene97216:CDS 45.0%
CGAGCAAGACAAGATACAAG+TGG + chr7.3:84378739-84378758 MS.gene97216:CDS 45.0%
CTCCCCTGATATACCTATGA+TGG + chr7.3:84379974-84379993 MS.gene97216:CDS 45.0%
CTGGTGTACCTTTCTTGTGT+TGG + chr7.3:84380519-84380538 MS.gene97216:CDS 45.0%
CTTATGAAGCAAGCAATGGC+TGG - chr7.3:84380461-84380480 None:intergenic 45.0%
CTTGGAAGTGGGCAACAATT+TGG + chr7.3:84378937-84378956 MS.gene97216:CDS 45.0%
CTTTGCAACCATGTTTGGCT+AGG - chr7.3:84378667-84378686 None:intergenic 45.0%
GCAAGAGATAAGGAAGAAGG+TGG + chr7.3:84380640-84380659 MS.gene97216:CDS 45.0%
GGACCAATTGGTAGGAACTT+TGG - chr7.3:84380140-84380159 None:intergenic 45.0%
GGACGAACAACCCAAAGAAA+AGG - chr7.3:84380338-84380357 None:intergenic 45.0%
GGGTTAACATGTCCTTGAAC+TGG - chr7.3:84378623-84378642 None:intergenic 45.0%
GGTGACATGGAAAATACACC+AGG - chr7.3:84380119-84380138 None:intergenic 45.0%
! ACCATAGAAGGTGTACATGC+TGG + chr7.3:84380500-84380519 MS.gene97216:CDS 45.0%
! CTTTGGAAGTCTAGTAGGCA+TGG - chr7.3:84378840-84378859 None:intergenic 45.0%
! TGGTAGGAACTTTGGTGACA+TGG - chr7.3:84380132-84380151 None:intergenic 45.0%
!!! TGATCTCGTTTTGGCTTTGC+AGG + chr7.3:84379921-84379940 MS.gene97216:intron 45.0%
!!! TAAAATTTTATTTGATAATA+TGG + chr7.3:84380028-84380047 MS.gene97216:CDS 5.0%
AAGTGGTGACACTCCCAGAT+GGG + chr7.3:84378756-84378775 MS.gene97216:CDS 50.0%
CTTGTCTTGCTCGGAAACAC+CGG - chr7.3:84378732-84378751 None:intergenic 50.0%
GACAGCACATGCCAAAGTAG+TGG - chr7.3:84378996-84379015 None:intergenic 50.0%
GCTCCTCTGTTGTGGGAAAT+AGG + chr7.3:84379421-84379440 MS.gene97216:intron 50.0%
TCCAGCTTCTGCCACTACTT+TGG + chr7.3:84378982-84379001 MS.gene97216:CDS 50.0%
TGAAGCAAGCAATGGCTGGA+TGG - chr7.3:84380457-84380476 None:intergenic 50.0%
TTACACGCAGACCCGACTTT+GGG - chr7.3:84379713-84379732 None:intergenic 50.0%
! CTTCAGGTTCCAACCCATCT+GGG - chr7.3:84378772-84378791 None:intergenic 50.0%
! TCTTCAGGTTCCAACCCATC+TGG - chr7.3:84378773-84378792 None:intergenic 50.0%
CAAGTGGTGACACTCCCAGA+TGG + chr7.3:84378755-84378774 MS.gene97216:CDS 55.0%
GCCAAAGTAGTGGCAGAAGC+TGG - chr7.3:84378986-84379005 None:intergenic 55.0%
GTTACACGCAGACCCGACTT+TGG - chr7.3:84379714-84379733 None:intergenic 55.0%
TACACGCAGACCCGACTTTG+GGG - chr7.3:84379712-84379731 None:intergenic 55.0%
!! ATGGGTTGGGCCTTGGAAGT+GGG + chr7.3:84378926-84378945 MS.gene97216:CDS 55.0%
!! TATGGGTTGGGCCTTGGAAG+TGG + chr7.3:84378925-84378944 MS.gene97216:CDS 55.0%
ACACGCAGACCCGACTTTGG+GGG - chr7.3:84379711-84379730 None:intergenic 60.0%
CGGCATGGTTCCCCCAAAGT+CGG + chr7.3:84379698-84379717 MS.gene97216:intron 60.0%
GCCGGGACTCCAAAAGCTCT+GGG - chr7.3:84379682-84379701 None:intergenic 60.0%
GGCATGGTTCCCCCAAAGTC+GGG + chr7.3:84379699-84379718 MS.gene97216:intron 60.0%
GGTGACACTCCCAGATGGGT+TGG + chr7.3:84378760-84378779 MS.gene97216:CDS 60.0%
TGCCGGGACTCCAAAAGCTC+TGG - chr7.3:84379683-84379702 None:intergenic 60.0%
! CGACTTTGGGGGAACCATGC+CGG - chr7.3:84379700-84379719 None:intergenic 60.0%
! GACTTTGGGGGAACCATGCC+GGG - chr7.3:84379699-84379718 None:intergenic 60.0%
!!! GAGCTTTTGGAGTCCCGGCA+TGG + chr7.3:84379683-84379702 MS.gene97216:intron 60.0%
!!! GCCCAGAGCTTTTGGAGTCC+CGG + chr7.3:84379678-84379697 MS.gene97216:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 84378584 84380790 84378584 ID=MS.gene97216
chr7.3 mRNA 84378584 84380790 84378584 ID=MS.gene97216.t1;Parent=MS.gene97216
chr7.3 exon 84378584 84379058 84378584 ID=MS.gene97216.t1.exon1;Parent=MS.gene97216.t1
chr7.3 CDS 84378584 84379058 84378584 ID=cds.MS.gene97216.t1;Parent=MS.gene97216.t1
chr7.3 exon 84379943 84380790 84379943 ID=MS.gene97216.t1.exon2;Parent=MS.gene97216.t1
chr7.3 CDS 84379943 84380790 84379943 ID=cds.MS.gene97216.t1;Parent=MS.gene97216.t1
Gene Sequence

>MS.gene97216

ATGGGTATATTGCCTCATTTTCTTGCTATACCATATCCAGTTCAAGGACATGTTAACCCCCTTATGCAATTCTCACAAATCCTAGCCAAACATGGTTGCAAAGTCACTTTTCTACAAACTGAGTTTAACTATAAACGATCGAAAACCGGTGTTTCCGAGCAAGACAAGATACAAGTGGTGACACTCCCAGATGGGTTGGAACCTGAAGATGATAGAAGTGATATAAAGAAAGTTATTTTATCAATTAAAAGCACCATGCCTACTAGACTTCCAAAGCTTATAGAAGAAGTTAATGCTTTGAATGTTGACAACAAGATCAATTGTATTATTGTTACATTTAATATGGGTTGGGCCTTGGAAGTGGGCAACAATTTGGGAATCAAAGGGGCTCTACTTTTTCCAGCTTCTGCCACTACTTTGGCATGTGCTGTCTGCATACCTAAACTTATTGAAGATGGGATTATTGATTCTGAAGGTAATAATTTATTTTATTTTATAAATTTCACAATTAAATTTTTTGGAATAGAATTACATAAAGCTGGTTTGTTATTCATTCATTTTGTTGTTATGATAATTATATCAACTTTTCTTATTTATTTAAGGAAAAATTTAAAAAAATAATTATACAAAGTATTTTCTTATTATTGTTGTTATGTCAATTATACACTGAAATTTTTAAAAGTATTTACTAAGTAGCATTCAACAACGTATAACAAAATTCGTGTAGCTAAGCTTCATTAAAAAATCAAAATCATAAGAACTTCGAAACATGAATGCAAATAAAAAATTAAGCGAAAGAGAGATGAAATTTACCAAACGGTGTCGTTTGAATTTGTCGCTCCTCTGTTGTGGGAAATAGGAAAACAAATGGTTGATGCAAAAAAAAAATGATTGTTGTGATTCCTTTAATGAAATAGCTTTCTAAATTGACTGGTTAAGTGATTATACAATTTGGGGGTGGTTTGATAGCATCAAATTTATATTCAGAAAGGAGAACTAGAGTCTAAAAGAAATCCAAACGCATATTGAAGAAAGAAAAAAAAGGAACATATGTTTTTTTCTTATTTGAGTGGGGGTGGGTATATTTTTTTTAGGCCCAGAGCTTTTGGAGTCCCGGCATGGTTCCCCCAAAGTCGGGTCTGCGTGTAACACTAAACCTTAATTCACTCAAGTAATAACGAAACTACATCTACTATTTAATGGACACACTTGGTCGAACTATTTAAACAAATAGTCGTGTTTCATTGTTTATGATTTGTGTTTCTTTAATCTTTTGTTACTAGTTGTTGAGGCAACATAATTTCAAGCTCAGGTTGAGATCAACATCAAATATTTCATGATCTCGTTTTGGCTTTGCAGGAAATCCCACCAAAAAACAAGAAATTCAAATCTCCCCTGATATACCTATGATGGACACAACAAACTTTCCATGGCATGGCGTAGATAAAATTTTATTTGATAATATGGTGCAAGAGATGCAAACTTTAAATTTTGGAGAATGGTGGCTTTGTAACACTGCTTATGATCTTGAGCCTGGTGTATTTTCCATGTCACCAAAGTTCCTACCAATTGGTCCATTGATGGAAAGTAACAACAACAAAAGCTCATTTTGGCAAGAAGATACAACTTGCTTAGATTGGTTAGACAAACAAGCACCTCAATTTGTCATATATGTTTCCTTTGGTAGTATGGTAGTAATGGACCAAAACCAATTTAATGAACTAGCCCTAGGACTTGATCTTCTTGACAAGCCTTTTCTTTGGGTTGTTCGTCCTAGTAATGACAAGAAGGTAAACTATGCATACCCTAATGATTTCCATGGAAGTAAAGGTAAAATTGTAGGTTGGGCACCACAAAGTAAAATATTGAACCATCCAGCCATTGCTTGCTTCATAAGTCATTGTGGATGGAATTCTACCATAGAAGGTGTACATGCTGGTGTACCTTTCTTGTGTTGGCCATTTTCAATTGATCAATTTCTCAATAAATCATATATTTGTGATGTGTGGAAGACTGGACTTGAATTAGAGAAAGATGATAATGGATTTATATCAAGGCAAGAGATAAGGAAGAAGGTGGATCAAGTAGTTGGTGATAATGACATAAAGGCAATGTGTTTGAAAATGAAGAAAATGACTATTAATAATATAGAAGAAGGTGGCCAGTCATCACATAATCTCCAAAAGTTTATTAGTTGGGCGAATTAA
Protein sequence

>MS.gene97216.t1

MGILPHFLAIPYPVQGHVNPLMQFSQILAKHGCKVTFLQTEFNYKRSKTGVSEQDKIQVVTLPDGLEPEDDRSDIKKVILSIKSTMPTRLPKLIEEVNALNVDNKINCIIVTFNMGWALEVGNNLGIKGALLFPASATTLACAVCIPKLIEDGIIDSEGNPTKKQEIQISPDIPMMDTTNFPWHGVDKILFDNMVQEMQTLNFGEWWLCNTAYDLEPGVFSMSPKFLPIGPLMESNNNKSSFWQEDTTCLDWLDKQAPQFVIYVSFGSMVVMDQNQFNELALGLDLLDKPFLWVVRPSNDKKVNYAYPNDFHGSKGKIVGWAPQSKILNHPAIACFISHCGWNSTIEGVHAGVPFLCWPFSIDQFLNKSYICDVWKTGLELEKDDNGFISRQEIRKKVDQVVGDNDIKAMCLKMKKMTINNIEEGGQSSHNLQKFISWAN