AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene91648


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91648.t1 MTR_7g013240 83.114 456 37 3 1 432 1 440 0.0 764
MS.gene91648.t1 MTR_7g013260 79.650 457 52 4 1 432 1 441 0.0 727
MS.gene91648.t1 MTR_7g013200 63.596 456 124 5 1 431 1 439 0.0 578
MS.gene91648.t1 MTR_7g013220 59.743 467 135 6 1 431 1 450 0.0 560
MS.gene91648.t1 MTR_7g013180 50.217 460 177 7 5 431 4 444 9.10e-159 456
MS.gene91648.t1 MTR_3g008010 28.216 482 272 11 5 428 9 474 1.78e-53 186
MS.gene91648.t1 MTR_6g014250 27.950 483 270 14 6 428 10 474 3.80e-50 177
MS.gene91648.t1 MTR_6g014290 27.801 482 274 11 5 428 9 474 5.24e-50 176
MS.gene91648.t1 MTR_5g098960 30.400 375 230 10 5 366 6 362 1.26e-49 175
MS.gene91648.t1 MTR_3g479470 27.721 487 267 13 5 428 12 476 3.57e-49 174
MS.gene91648.t1 MTR_7g080935 29.622 476 247 20 6 429 11 450 3.78e-49 174
MS.gene91648.t1 MTR_6g014020 27.423 485 274 13 5 428 9 476 5.40e-49 174
MS.gene91648.t1 MTR_6g014170 27.368 475 269 12 5 428 9 458 9.56e-48 170
MS.gene91648.t1 MTR_7g080940 27.696 473 260 20 6 429 11 450 1.28e-46 167
MS.gene91648.t1 MTR_6g014040 27.572 486 273 15 5 428 9 477 3.08e-46 166
MS.gene91648.t1 MTR_3g479520 28.689 488 262 15 5 428 14 479 3.29e-46 166
MS.gene91648.t1 MTR_7g011470 28.361 476 263 14 5 428 9 458 5.86e-46 165
MS.gene91648.t1 MTR_0288s0020 26.834 477 268 14 5 428 9 457 7.83e-46 165
MS.gene91648.t1 MTR_6g014187 26.392 485 279 11 5 428 9 476 1.02e-45 165
MS.gene91648.t1 MTR_6g013440 26.446 484 280 12 5 428 10 477 1.54e-45 164
MS.gene91648.t1 MTR_6g038230 28.233 464 275 14 4 429 9 452 1.91e-45 164
MS.gene91648.t1 MTR_7g011470 28.243 478 265 14 5 428 9 462 2.74e-45 163
MS.gene91648.t1 MTR_3g479490 28.484 488 263 16 6 429 6 471 2.76e-44 161
MS.gene91648.t1 MTR_2g008210 28.542 487 264 15 5 429 10 474 3.54e-44 160
MS.gene91648.t1 MTR_6g014220 27.088 491 266 14 5 428 9 474 3.59e-44 160
MS.gene91648.t1 MTR_6g013450 26.721 494 267 15 5 428 9 477 5.76e-44 160
MS.gene91648.t1 MTR_6g013960 26.434 488 275 15 5 428 9 476 7.02e-44 160
MS.gene91648.t1 MTR_5g464810 31.017 403 219 12 4 368 10 391 9.18e-44 159
MS.gene91648.t1 MTR_5g064240 31.017 403 219 12 4 368 10 391 9.18e-44 159
MS.gene91648.t1 MTR_6g014310 26.489 487 282 11 3 429 8 478 1.08e-43 159
MS.gene91648.t1 MTR_6g013990 26.556 482 280 13 5 428 9 474 1.46e-43 159
MS.gene91648.t1 MTR_6g038220 27.004 474 265 17 5 429 10 451 3.26e-43 157
MS.gene91648.t1 MTR_5g058320 26.860 484 263 15 5 428 9 461 1.08e-42 156
MS.gene91648.t1 MTR_8g059425 27.572 486 270 15 5 428 9 474 1.11e-42 157
MS.gene91648.t1 MTR_6g014270 26.639 488 278 14 5 429 6 476 8.02e-42 154
MS.gene91648.t1 MTR_4g095008 26.834 477 271 16 6 429 11 462 1.27e-41 155
MS.gene91648.t1 MTR_0036s0220 30.827 399 225 12 4 368 10 391 1.62e-41 153
MS.gene91648.t1 MTR_4g094920 26.638 473 275 13 7 429 27 477 2.73e-41 153
MS.gene91648.t1 MTR_7g080950 26.004 473 268 16 6 429 6 445 3.36e-41 152
MS.gene91648.t1 MTR_3g079480 27.515 487 269 15 5 428 20 485 3.81e-41 152
MS.gene91648.t1 MTR_5g035580 28.211 475 256 18 6 430 13 452 1.41e-40 150
MS.gene91648.t1 MTR_6g038300 27.044 477 263 17 5 429 10 453 1.73e-40 150
MS.gene91648.t1 MTR_6g038240 25.210 476 274 15 4 429 9 452 2.08e-40 150
MS.gene91648.t1 MTR_6g011340 26.955 486 275 13 5 428 9 476 6.66e-40 149
MS.gene91648.t1 MTR_6g014050 27.105 487 277 12 3 428 8 477 8.27e-40 149
MS.gene91648.t1 MTR_6g014150 25.000 484 287 12 5 428 6 473 8.87e-40 149
MS.gene91648.t1 MTR_5g035560 26.987 478 254 17 6 428 11 448 9.94e-40 149
MS.gene91648.t1 MTR_6g014300 24.330 485 273 11 5 428 11 462 1.36e-39 148
MS.gene91648.t1 MTR_6g014200 25.207 484 286 12 5 428 6 473 1.50e-39 148
MS.gene91648.t1 MTR_5g464760 29.455 404 224 13 5 368 11 393 1.55e-39 148
MS.gene91648.t1 MTR_6g013900 25.813 492 272 14 5 428 9 475 4.73e-39 147
MS.gene91648.t1 MTR_6g038200 26.261 476 269 17 4 429 9 452 1.12e-38 145
MS.gene91648.t1 MTR_6g013920 26.016 492 271 14 5 428 9 475 1.42e-38 145
MS.gene91648.t1 MTR_1g107380 24.268 478 286 11 6 428 13 469 2.90e-38 144
MS.gene91648.t1 MTR_6g014240 25.855 468 271 14 6 428 7 443 9.59e-38 142
MS.gene91648.t1 MTR_4g094220 25.605 496 271 16 5 428 6 475 6.77e-37 140
MS.gene91648.t1 MTR_8g007585 25.383 457 229 11 6 428 10 388 1.19e-36 138
MS.gene91648.t1 MTR_7g080900 27.332 461 262 19 6 431 12 434 7.63e-36 137
MS.gene91648.t1 MTR_8g083290 24.638 483 283 15 4 428 1 460 5.03e-35 135
MS.gene91648.t1 MTR_8g088560 25.420 476 273 16 6 429 10 455 1.27e-34 134
MS.gene91648.t1 MTR_5g031840 28.750 400 222 11 5 368 4 376 2.74e-34 133
MS.gene91648.t1 MTR_3g084520 25.971 489 273 17 6 429 6 470 5.00e-34 133
MS.gene91648.t1 MTR_5g031860 26.556 482 276 17 4 430 10 468 8.45e-34 132
MS.gene91648.t1 MTR_3g069690 26.866 469 267 17 6 428 8 446 3.15e-33 130
MS.gene91648.t1 MTR_5g016480 26.598 485 267 20 8 429 10 468 5.16e-33 130
MS.gene91648.t1 MTR_3g084530 25.301 498 263 21 6 428 6 469 1.04e-31 126
MS.gene91648.t1 MTR_8g009063 25.455 495 269 16 6 432 13 475 1.48e-31 126
MS.gene91648.t1 MTR_1g032490 25.833 480 279 16 6 429 10 468 2.78e-31 125
MS.gene91648.t1 MTR_8g008990 24.950 497 271 18 6 432 6 470 3.13e-31 125
MS.gene91648.t1 MTR_3g049970 25.880 483 273 19 6 428 9 466 3.96e-31 124
MS.gene91648.t1 MTR_8g009055 26.061 495 266 18 6 432 6 468 1.22e-30 123
MS.gene91648.t1 MTR_1g107350 26.240 484 270 19 6 428 8 465 3.13e-30 122
MS.gene91648.t1 MTR_3g084540 25.896 502 256 22 6 428 6 470 3.69e-30 122
MS.gene91648.t1 MTR_6g014186 24.520 469 270 16 5 428 6 435 4.58e-30 121
MS.gene91648.t1 MTR_3g069710 25.054 467 274 16 8 429 14 449 6.71e-30 121
MS.gene91648.t1 MTR_7g117405 28.218 404 223 16 4 371 10 382 1.27e-29 120
MS.gene91648.t1 MTR_1g107315 28.321 399 222 18 6 369 8 377 5.42e-29 119
MS.gene91648.t1 MTR_8g027885 25.620 484 261 22 5 424 17 465 5.59e-29 119
MS.gene91648.t1 MTR_8g009050 25.510 490 275 16 6 432 6 468 1.04e-28 117
MS.gene91648.t1 MTR_1g107375 25.364 481 263 19 6 428 8 450 1.15e-28 117
MS.gene91648.t1 MTR_8g027870 24.846 487 261 21 5 424 17 465 1.44e-28 117
MS.gene91648.t1 MTR_4g064987 26.098 387 233 13 6 368 8 365 1.82e-28 117
MS.gene91648.t1 MTR_8g064880 27.295 403 227 17 6 369 9 384 3.07e-28 116
MS.gene91648.t1 MTR_6g013680 25.476 420 226 14 46 428 2 371 3.47e-28 115
MS.gene91648.t1 MTR_8g083280 23.800 479 278 16 8 428 9 458 6.56e-28 115
MS.gene91648.t1 MTR_1g107365 25.866 491 249 21 6 428 45 488 8.32e-28 115
MS.gene91648.t1 MTR_8g009073 25.630 476 268 17 6 432 6 444 1.06e-27 115
MS.gene91648.t1 MTR_7g117170 23.614 487 290 17 5 432 14 477 1.31e-27 114
MS.gene91648.t1 MTR_7g070660 25.301 498 265 19 6 428 11 476 1.61e-27 114
MS.gene91648.t1 MTR_7g070610 26.000 500 264 18 6 428 13 483 1.79e-27 114
MS.gene91648.t1 MTR_1g107360 24.742 485 268 20 6 428 9 458 2.40e-27 114
MS.gene91648.t1 MTR_4g064987 26.098 387 227 14 6 368 8 359 2.75e-27 113
MS.gene91648.t1 MTR_5g031830 25.309 486 276 16 5 430 11 469 4.69e-27 113
MS.gene91648.t1 MTR_8g064870 25.052 483 275 18 8 428 13 470 6.88e-27 112
MS.gene91648.t1 MTR_6g023665 24.638 483 269 17 9 427 16 467 1.42e-26 111
MS.gene91648.t1 MTR_5g072860 23.319 476 281 16 6 428 18 462 2.26e-26 111
MS.gene91648.t1 MTR_0184s0040 24.082 490 281 18 6 432 21 482 2.32e-26 111
MS.gene91648.t1 MTR_0078s0190 24.082 490 281 18 6 432 21 482 2.32e-26 111
MS.gene91648.t1 MTR_0184s0030 24.402 418 237 16 61 427 74 463 4.70e-26 110
MS.gene91648.t1 MTR_8g006730 25.420 476 245 19 6 410 6 442 7.41e-26 109
MS.gene91648.t1 MTR_7g070940 24.380 484 278 13 8 428 11 469 1.14e-25 109
MS.gene91648.t1 MTR_1g019510 24.346 497 269 16 6 432 6 465 1.41e-25 108
MS.gene91648.t1 MTR_7g047030 23.769 467 271 15 1 409 1 440 1.89e-25 108
MS.gene91648.t1 MTR_7g047270 23.769 467 271 15 1 409 1 440 1.89e-25 108
MS.gene91648.t1 MTR_6g014160 24.155 414 224 9 45 428 36 389 6.60e-25 105
MS.gene91648.t1 MTR_1g107285 25.462 487 263 21 7 428 9 460 7.96e-25 106
MS.gene91648.t1 MTR_8g009067 25.263 475 271 18 6 432 6 444 1.45e-24 105
MS.gene91648.t1 MTR_8g006260 25.436 401 234 15 6 368 6 379 2.37e-24 105
MS.gene91648.t1 MTR_6g014190 27.863 262 132 8 207 428 39 283 2.40e-24 102
MS.gene91648.t1 MTR_4g485630 26.515 396 231 16 6 368 9 377 6.67e-24 103
MS.gene91648.t1 MTR_8g008970 25.319 470 267 18 6 427 6 439 1.41e-23 103
MS.gene91648.t1 MTR_8g008970 25.623 281 149 10 191 432 531 790 2.50e-16 82.0
MS.gene91648.t1 MTR_5g019580 23.701 481 262 19 6 412 7 456 1.62e-23 103
MS.gene91648.t1 MTR_8g006710 24.644 491 280 18 1 429 1 463 3.35e-23 102
MS.gene91648.t1 MTR_7g071040 24.040 495 280 16 6 428 17 487 4.47e-23 101
MS.gene91648.t1 MTR_7g046490 23.218 491 283 17 5 432 5 464 5.87e-23 101
MS.gene91648.t1 MTR_6g033615 30.172 232 107 8 223 420 229 439 6.86e-23 100
MS.gene91648.t1 MTR_8g006270 30.864 324 159 14 77 368 83 373 8.55e-23 100
MS.gene91648.t1 MTR_0477s0010 28.311 219 107 6 240 428 115 313 1.03e-22 98.6
MS.gene91648.t1 MTR_6g488280 24.689 482 264 20 9 424 9 457 1.17e-22 100
MS.gene91648.t1 MTR_0428s0010 24.689 482 264 20 9 424 9 457 1.17e-22 100
MS.gene91648.t1 MTR_4g108250 25.098 510 259 21 6 428 11 484 2.18e-22 99.8
MS.gene91648.t1 MTR_8g012650 25.661 378 205 14 106 427 110 467 2.71e-22 99.4
MS.gene91648.t1 MTR_0078s0010 23.368 475 263 15 1 409 1 440 3.22e-22 99.0
MS.gene91648.t1 MTR_3g031450 22.484 467 288 16 3 428 15 448 3.88e-22 99.0
MS.gene91648.t1 MTR_7g070780 24.254 503 268 18 6 428 11 480 5.40e-22 98.6
MS.gene91648.t1 MTR_5g090600 21.639 476 286 19 10 430 9 452 8.45e-22 97.8
MS.gene91648.t1 MTR_6g005600 23.395 483 278 19 6 424 6 460 9.70e-22 97.8
MS.gene91648.t1 MTR_7g070930 25.373 402 233 15 6 368 14 387 1.00e-21 97.8
MS.gene91648.t1 MTR_7g102550 24.400 500 275 20 6 428 9 482 1.18e-21 97.4
MS.gene91648.t1 MTR_3g479620 34.356 163 98 3 5 159 5 166 1.18e-21 92.0
MS.gene91648.t1 MTR_8g009067 26.705 352 193 13 118 432 3 326 1.33e-21 95.9
MS.gene91648.t1 MTR_6g033625 30.252 238 111 8 224 427 244 460 1.92e-21 96.7
MS.gene91648.t1 MTR_7g055710 24.898 490 273 18 6 424 11 476 2.28e-21 96.7
MS.gene91648.t1 MTR_8g012635 24.079 407 232 15 77 427 82 467 2.34e-21 96.7
MS.gene91648.t1 MTR_6g033725 24.205 409 222 15 80 427 76 457 2.36e-21 96.7
MS.gene91648.t1 MTR_5g090580 20.816 490 294 15 10 430 9 473 3.63e-21 95.9
MS.gene91648.t1 MTR_5g019580 24.008 479 235 21 6 412 59 480 5.04e-21 95.9
MS.gene91648.t1 MTR_5g070090 24.059 478 278 15 6 428 11 458 7.43e-21 94.7
MS.gene91648.t1 MTR_7g080960 24.528 477 287 21 6 429 12 468 1.05e-20 94.4
MS.gene91648.t1 MTR_6g033660 25.000 384 205 14 97 427 106 459 1.15e-20 94.4
MS.gene91648.t1 MTR_7g070800 23.077 494 282 19 6 428 6 472 1.55e-20 94.0
MS.gene91648.t1 MTR_5g045960 24.877 406 233 15 6 369 9 384 1.68e-20 94.0
MS.gene91648.t1 MTR_3g031400 23.690 477 266 20 4 428 16 446 1.75e-20 94.0
MS.gene91648.t1 MTR_8g077590 24.771 327 199 12 68 368 71 376 1.86e-20 93.6
MS.gene91648.t1 MTR_2g098430 22.470 494 291 18 8 431 8 479 1.87e-20 94.0
MS.gene91648.t1 MTR_8g012630 32.000 225 91 10 249 427 203 411 2.65e-20 92.8
MS.gene91648.t1 MTR_7g102450 25.806 403 221 16 4 369 9 370 4.30e-20 92.8
MS.gene91648.t1 MTR_5g004940 29.817 218 113 9 227 428 181 374 5.78e-20 91.7
MS.gene91648.t1 MTR_8g009073 29.044 272 144 10 191 432 63 315 6.96e-20 90.5
MS.gene91648.t1 MTR_4g485640 26.598 391 223 15 8 368 211 567 7.18e-20 92.8
MS.gene91648.t1 MTR_8g066610 26.914 405 229 16 6 371 9 385 7.83e-20 92.0
MS.gene91648.t1 MTR_0891s0010 26.644 289 146 9 186 428 18 286 1.01e-19 89.4
MS.gene91648.t1 MTR_6g033675 22.774 483 284 16 7 427 5 460 1.31e-19 91.3
MS.gene91648.t1 MTR_4g485590 24.873 394 217 16 6 369 9 353 2.27e-19 90.1
MS.gene91648.t1 MTR_5g098930 21.721 488 285 17 10 430 9 466 2.41e-19 90.5
MS.gene91648.t1 MTR_8g012745 24.344 419 236 16 68 427 68 464 4.41e-19 89.7
MS.gene91648.t1 MTR_0078s0060 22.833 473 257 18 6 409 6 439 5.75e-19 89.4
MS.gene91648.t1 MTR_5g070040 24.670 454 268 18 6 416 11 433 7.07e-19 89.0
MS.gene91648.t1 MTR_8g068340 24.306 432 255 16 6 398 12 410 7.54e-19 89.0
MS.gene91648.t1 MTR_5g087620 22.970 505 285 21 5 428 9 490 9.93e-19 88.6
MS.gene91648.t1 MTR_5g075440 21.237 485 284 15 4 429 8 453 1.24e-18 88.2
MS.gene91648.t1 MTR_3g479610 26.606 327 168 11 149 428 8 309 1.24e-18 86.7
MS.gene91648.t1 MTR_8g465670 23.704 405 231 16 9 371 10 378 1.73e-18 87.8
MS.gene91648.t1 MTR_4g117960 25.447 503 257 23 6 428 13 477 2.25e-18 87.4
MS.gene91648.t1 MTR_2g059240 22.083 480 286 14 5 425 12 462 2.78e-18 87.0
MS.gene91648.t1 MTR_4g024020 24.324 407 237 16 6 369 9 387 3.67e-18 87.0
MS.gene91648.t1 MTR_7g102460 22.863 503 278 19 6 428 9 481 5.13e-18 86.7
MS.gene91648.t1 MTR_7g102560 25.622 402 231 18 6 368 9 381 5.36e-18 86.3
MS.gene91648.t1 MTR_1g029540 20.335 477 284 17 11 429 19 457 5.93e-18 86.3
MS.gene91648.t1 MTR_7g067120 23.831 449 246 19 6 410 9 405 9.97e-18 85.1
MS.gene91648.t1 MTR_7g070860 23.299 485 270 20 10 428 11 459 1.14e-17 85.5
MS.gene91648.t1 MTR_5g090630 24.304 395 235 15 10 371 9 372 1.14e-17 85.5
MS.gene91648.t1 MTR_5g090620 22.222 459 283 18 10 419 9 442 1.27e-17 85.1
MS.gene91648.t1 MTR_8g043470 21.836 403 232 9 61 428 20 374 1.37e-17 84.3
MS.gene91648.t1 MTR_7g070870 25.128 390 223 16 10 365 23 377 1.62e-17 84.7
MS.gene91648.t1 MTR_8g068360 25.176 425 259 17 6 398 12 409 1.67e-17 84.7
MS.gene91648.t1 MTR_5g090700 23.573 403 237 16 8 368 7 380 2.18e-17 84.3
MS.gene91648.t1 MTR_7g067330 24.605 443 257 20 6 423 9 399 2.29e-17 84.3
MS.gene91648.t1 MTR_4g118000 25.000 396 223 13 7 369 13 367 2.56e-17 84.3
MS.gene91648.t1 MTR_1g019520 28.261 230 105 9 247 432 1 214 4.35e-17 80.1
MS.gene91648.t1 MTR_5g072810 21.622 481 279 18 6 429 12 451 4.49e-17 83.6
MS.gene91648.t1 MTR_7g102490 23.611 504 275 20 6 428 9 483 7.30e-17 83.2
MS.gene91648.t1 MTR_8g006220 22.494 409 239 15 9 371 9 385 2.58e-16 81.3
MS.gene91648.t1 MTR_3g009510 23.518 506 263 21 8 428 7 473 2.61e-16 81.3
MS.gene91648.t1 MTR_8g090095 22.449 490 267 17 11 429 30 477 3.16e-16 80.9
MS.gene91648.t1 MTR_5g090610 21.120 393 243 13 8 368 7 364 7.61e-16 79.7
MS.gene91648.t1 MTR_5g090660 21.328 497 281 25 10 430 9 471 9.98e-16 79.7
MS.gene91648.t1 MTR_1g062380 21.807 509 280 19 6 429 16 491 1.10e-15 79.3
MS.gene91648.t1 MTR_5g090670 20.408 490 298 15 10 430 9 475 1.19e-15 79.3
MS.gene91648.t1 MTR_6g014195 28.221 163 105 2 5 155 9 171 1.83e-15 75.5
MS.gene91648.t1 MTR_4g128720 22.056 467 291 17 6 428 15 452 2.12e-15 78.2
MS.gene91648.t1 MTR_0009s0240 24.937 397 237 18 6 371 7 373 5.11e-15 77.0
MS.gene91648.t1 MTR_8g012730 38.235 136 49 7 252 368 99 218 5.45e-15 75.9
MS.gene91648.t1 MTR_4g117890 24.060 399 222 15 10 368 17 374 6.04e-15 77.0
MS.gene91648.t1 MTR_8g071070 23.701 481 287 19 6 428 7 465 6.30e-15 77.0
MS.gene91648.t1 MTR_6g035295 22.166 397 247 14 8 368 14 384 6.86e-15 77.0
MS.gene91648.t1 MTR_8g068330 25.258 388 240 16 6 366 8 372 7.71e-15 76.6
MS.gene91648.t1 MTR_4g008630 27.074 229 95 10 249 429 256 460 9.09e-15 76.3
MS.gene91648.t1 MTR_0536s0020 24.688 401 217 17 10 368 22 379 9.16e-15 76.6
MS.gene91648.t1 MTR_0199s0010 27.389 157 106 2 6 154 10 166 9.79e-15 74.7
MS.gene91648.t1 MTR_4g117980 23.000 500 274 21 6 428 13 478 1.10e-14 76.3
MS.gene91648.t1 MTR_2086s0010 27.907 172 89 5 288 428 1 168 1.32e-14 72.0
MS.gene91648.t1 MTR_1996s0010 27.907 172 89 5 288 428 1 168 1.32e-14 72.0
MS.gene91648.t1 MTR_5g072830 20.833 480 281 17 6 429 10 446 1.40e-14 75.9
MS.gene91648.t1 MTR_5g066390 29.221 154 75 4 305 428 62 211 2.01e-14 72.4
MS.gene91648.t1 MTR_7g102520 26.519 181 89 6 292 428 305 485 2.14e-14 75.5
MS.gene91648.t1 MTR_5g045970 28.261 184 86 6 292 429 307 490 3.32e-14 74.7
MS.gene91648.t1 MTR_4g117950 24.895 478 272 19 10 428 10 459 3.76e-14 74.7
MS.gene91648.t1 MTR_0536s0010 24.431 483 267 19 10 428 25 473 8.60e-14 73.6
MS.gene91648.t1 MTR_8g466240 23.881 402 224 18 6 368 8 366 1.00e-13 73.2
MS.gene91648.t1 MTR_8g009840 27.500 200 101 5 272 427 322 521 2.62e-13 72.0
MS.gene91648.t1 MTR_4g128690 22.894 463 293 19 4 428 13 449 7.12e-13 70.5
MS.gene91648.t1 MTR_2g035020 21.926 488 288 15 10 428 15 478 7.70e-13 70.5
MS.gene91648.t1 MTR_3g009490 27.174 184 88 6 291 428 2 185 1.21e-12 66.6
MS.gene91648.t1 MTR_4g079270 28.977 176 90 6 271 412 265 439 1.71e-12 69.3
MS.gene91648.t1 MTR_4g485620 23.355 471 277 19 20 428 3 451 1.91e-12 69.3
MS.gene91648.t1 MTR_5g072850 23.214 448 240 17 6 428 10 378 2.00e-12 68.9
MS.gene91648.t1 MTR_0475s0020 34.653 101 60 2 5 99 9 109 2.86e-12 66.2
MS.gene91648.t1 MTR_1g107325 30.159 126 59 4 332 428 224 349 2.87e-12 68.2
MS.gene91648.t1 MTR_7g470610 37.363 91 51 2 284 368 150 240 7.61e-12 66.2
MS.gene91648.t1 MTR_7g070583 37.363 91 51 2 284 368 150 240 7.61e-12 66.2
MS.gene91648.t1 MTR_4g031800 22.021 386 250 12 9 368 12 372 1.04e-11 67.0
MS.gene91648.t1 MTR_2g014900 30.405 148 73 6 280 397 270 417 1.55e-11 66.2
MS.gene91648.t1 MTR_4g079250 28.977 176 90 6 271 412 265 439 1.59e-11 66.2
MS.gene91648.t1 MTR_2g035040 25.092 271 135 10 209 428 130 383 1.72e-11 65.9
MS.gene91648.t1 MTR_7g012120 26.754 228 103 9 249 428 269 480 3.05e-11 65.5
MS.gene91648.t1 MTR_5g090690 26.943 193 102 6 225 400 165 335 3.45e-11 65.1
MS.gene91648.t1 MTR_2g046820 25.070 355 206 16 98 416 99 429 6.67e-11 64.3
MS.gene91648.t1 MTR_5g027210 25.000 208 95 8 236 400 263 452 8.18e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene91648.t1 AT3G02100 35.669 471 234 11 5 430 12 458 2.43e-91 284
MS.gene91648.t1 AT1G05675 27.907 473 264 15 6 429 6 450 6.71e-50 176
MS.gene91648.t1 AT1G05680 28.571 476 257 16 6 429 6 450 3.38e-48 171
MS.gene91648.t1 AT1G22370 29.500 400 235 10 2 371 9 391 1.63e-46 167
MS.gene91648.t1 AT1G22360 30.348 402 220 12 6 368 10 390 5.85e-46 165
MS.gene91648.t1 AT1G22360 30.348 402 220 12 6 368 10 390 6.98e-46 165
MS.gene91648.t1 AT1G22340 28.818 406 230 13 5 371 12 397 4.15e-44 160
MS.gene91648.t1 AT1G22400 28.960 404 226 11 5 368 12 394 9.49e-43 157
MS.gene91648.t1 AT3G21560 26.337 486 269 17 5 428 11 469 6.11e-41 152
MS.gene91648.t1 AT3G22250 27.047 403 231 12 5 371 7 382 1.18e-40 150
MS.gene91648.t1 AT3G46670 26.327 471 265 15 8 430 11 447 1.61e-40 150
MS.gene91648.t1 AT1G22380 29.032 403 226 11 5 368 12 393 1.95e-40 150
MS.gene91648.t1 AT1G78270 29.602 402 225 13 5 368 12 393 4.92e-40 149
MS.gene91648.t1 AT3G46660 25.000 464 282 15 8 430 16 454 6.37e-39 146
MS.gene91648.t1 AT5G59590 24.784 464 281 14 6 428 10 446 5.90e-35 135
MS.gene91648.t1 AT2G31750 24.842 475 272 13 8 429 10 452 1.16e-34 134
MS.gene91648.t1 AT2G31750 25.895 475 267 15 8 429 10 452 1.30e-34 134
MS.gene91648.t1 AT2G23260 25.786 477 266 15 6 429 10 451 3.89e-34 133
MS.gene91648.t1 AT4G15490 25.311 482 275 19 6 428 8 463 3.98e-34 133
MS.gene91648.t1 AT5G59580 25.523 478 269 19 1 428 4 444 5.61e-34 132
MS.gene91648.t1 AT3G46680 26.078 464 278 16 6 429 9 447 8.73e-34 132
MS.gene91648.t1 AT4G15480 26.611 481 271 21 6 428 19 475 9.00e-34 132
MS.gene91648.t1 AT3G55710 28.067 481 253 20 6 429 8 452 9.68e-34 132
MS.gene91648.t1 AT2G43840 24.790 476 268 18 6 429 7 444 1.30e-33 131
MS.gene91648.t1 AT1G05560 26.105 475 270 18 5 428 4 448 4.88e-33 130
MS.gene91648.t1 AT4G15550 23.422 491 277 18 5 428 12 470 5.09e-33 130
MS.gene91648.t1 AT2G23250 25.862 464 258 17 15 429 7 433 5.31e-33 129
MS.gene91648.t1 AT2G43840 24.790 476 268 18 6 429 7 444 5.88e-33 129
MS.gene91648.t1 AT1G05560 26.105 475 270 18 5 428 54 498 7.65e-33 130
MS.gene91648.t1 AT2G43820 25.840 476 263 17 6 429 7 444 1.06e-32 129
MS.gene91648.t1 AT3G55700 26.964 471 267 20 6 429 8 448 1.24e-32 129
MS.gene91648.t1 AT3G11340 25.000 472 272 15 5 430 8 443 3.37e-32 127
MS.gene91648.t1 AT4G15500 24.793 484 274 19 4 428 7 459 3.45e-32 127
MS.gene91648.t1 AT3G46720 24.454 458 286 13 6 430 9 439 1.50e-31 125
MS.gene91648.t1 AT2G31790 24.078 461 299 11 6 429 8 454 2.24e-31 125
MS.gene91648.t1 AT3G46690 26.121 379 242 12 6 369 9 364 3.24e-31 124
MS.gene91648.t1 AT4G14090 23.932 468 285 17 5 428 12 452 4.95e-31 124
MS.gene91648.t1 AT1G01420 26.042 480 278 16 2 426 4 461 1.33e-30 123
MS.gene91648.t1 AT1G01420 26.042 480 278 16 2 426 7 464 1.60e-30 123
MS.gene91648.t1 AT3G46650 27.200 375 225 13 6 369 10 347 3.42e-29 119
MS.gene91648.t1 AT5G38010 24.681 470 278 18 6 428 10 450 2.02e-28 117
MS.gene91648.t1 AT4G01070 25.641 468 253 16 5 409 7 442 2.72e-28 117
MS.gene91648.t1 AT2G15480 25.725 517 249 18 6 432 10 481 3.45e-28 116
MS.gene91648.t1 AT3G46700 25.464 377 242 11 6 369 9 359 4.15e-28 115
MS.gene91648.t1 AT2G15490 26.275 510 258 20 6 432 7 481 2.31e-27 114
MS.gene91648.t1 AT5G05880 23.305 472 279 15 8 430 10 447 2.47e-27 114
MS.gene91648.t1 AT2G15490 26.285 506 260 20 6 432 7 478 2.86e-27 114
MS.gene91648.t1 AT5G38040 23.779 471 261 19 14 428 18 446 6.12e-27 112
MS.gene91648.t1 AT5G05870 25.000 480 263 21 8 428 10 451 7.34e-27 112
MS.gene91648.t1 AT5G05860 27.249 389 219 16 8 369 11 362 1.05e-26 112
MS.gene91648.t1 AT2G15480 25.097 514 266 18 6 432 10 491 3.04e-26 111
MS.gene91648.t1 AT2G26480 24.804 383 233 12 8 368 10 359 3.91e-26 110
MS.gene91648.t1 AT5G05900 24.324 481 262 18 8 430 10 446 6.89e-26 109
MS.gene91648.t1 AT2G36970 26.667 405 231 13 5 371 9 385 9.58e-26 109
MS.gene91648.t1 AT1G01390 26.485 404 230 17 5 371 24 397 1.39e-25 109
MS.gene91648.t1 AT1G05530 23.899 477 281 18 5 428 4 451 1.42e-25 108
MS.gene91648.t1 AT1G01390 25.990 404 232 16 5 371 7 380 1.47e-25 108
MS.gene91648.t1 AT2G36800 25.600 500 260 23 6 424 12 480 6.44e-25 107
MS.gene91648.t1 AT2G36770 25.428 409 230 17 6 371 14 390 5.32e-24 104
MS.gene91648.t1 AT5G49690 24.174 484 264 18 6 428 10 451 5.49e-24 104
MS.gene91648.t1 AT2G30150 23.077 481 268 18 6 428 13 449 6.19e-24 103
MS.gene91648.t1 AT2G28080 26.546 388 226 18 10 365 22 382 1.42e-23 103
MS.gene91648.t1 AT3G16520 24.543 383 227 13 91 431 98 460 1.44e-23 102
MS.gene91648.t1 AT5G66690 25.322 466 256 18 5 409 6 440 2.48e-23 102
MS.gene91648.t1 AT2G30140 23.640 478 267 18 6 428 13 447 3.95e-23 101
MS.gene91648.t1 AT4G34138 24.802 504 259 22 6 428 11 475 4.09e-23 102
MS.gene91648.t1 AT2G30150 23.061 477 265 18 10 428 1 433 5.47e-23 100
MS.gene91648.t1 AT2G36750 26.290 407 228 16 6 371 10 385 6.28e-23 101
MS.gene91648.t1 AT2G30140 23.467 473 275 16 6 428 13 448 6.49e-23 100
MS.gene91648.t1 AT3G53160 24.056 503 271 20 6 428 8 479 8.82e-23 100
MS.gene91648.t1 AT1G24100 23.108 489 266 21 6 428 11 455 1.28e-22 100
MS.gene91648.t1 AT2G29750 24.312 436 267 14 6 399 8 422 1.41e-22 100
MS.gene91648.t1 AT5G05890 25.773 388 224 15 8 365 10 363 2.58e-22 99.4
MS.gene91648.t1 AT3G21790 21.792 491 297 15 6 428 4 475 2.82e-22 99.4
MS.gene91648.t1 AT3G50740 26.295 502 253 23 5 427 6 469 5.23e-22 98.6
MS.gene91648.t1 AT5G26310 23.829 491 264 18 5 423 6 458 5.98e-22 98.2
MS.gene91648.t1 AT3G16520 24.581 358 209 12 91 407 98 435 6.36e-22 97.8
MS.gene91648.t1 AT3G16520 24.581 358 209 12 91 407 98 435 6.40e-22 98.2
MS.gene91648.t1 AT1G22370 33.500 200 99 6 187 368 35 218 1.02e-21 95.5
MS.gene91648.t1 AT4G34131 23.848 499 272 18 6 428 10 476 1.84e-21 97.1
MS.gene91648.t1 AT2G36780 22.110 493 285 16 6 424 14 481 1.96e-21 97.1
MS.gene91648.t1 AT3G21750 21.859 398 247 13 6 368 4 372 2.51e-20 93.6
MS.gene91648.t1 AT2G36760 22.441 508 265 20 6 424 14 481 2.71e-20 93.6
MS.gene91648.t1 AT5G37950 24.731 372 223 13 21 368 1 339 7.55e-20 90.9
MS.gene91648.t1 AT5G37950 24.523 367 224 13 21 368 1 333 1.17e-19 90.1
MS.gene91648.t1 AT2G36790 26.055 403 229 15 6 368 13 386 1.40e-19 91.3
MS.gene91648.t1 AT5G65550 24.490 392 245 12 6 371 9 375 1.46e-19 91.3
MS.gene91648.t1 AT4G34135 23.940 401 241 15 6 368 11 385 1.65e-19 90.9
MS.gene91648.t1 AT3G21800 21.212 495 289 17 7 428 6 472 1.72e-19 90.9
MS.gene91648.t1 AT2G16890 22.869 481 273 15 6 421 9 456 1.77e-19 90.9
MS.gene91648.t1 AT1G73880 24.486 486 268 16 6 428 14 463 1.90e-19 90.9
MS.gene91648.t1 AT3G21760 22.177 496 291 16 6 428 4 477 2.75e-19 90.5
MS.gene91648.t1 AT1G07250 22.904 489 288 18 6 429 6 470 4.13e-19 89.7
MS.gene91648.t1 AT2G29740 23.632 402 243 13 6 369 8 383 6.22e-19 89.4
MS.gene91648.t1 AT2G16890 22.940 449 251 14 6 392 9 424 7.36e-19 88.6
MS.gene91648.t1 AT4G15280 21.414 495 289 18 6 428 4 470 1.23e-18 88.2
MS.gene91648.t1 AT4G15280 21.414 495 289 18 6 428 36 502 1.58e-18 88.2
MS.gene91648.t1 AT1G10400 23.327 493 270 20 6 429 7 460 6.14e-18 86.3
MS.gene91648.t1 AT3G21780 21.649 485 295 18 6 428 4 465 6.44e-18 86.3
MS.gene91648.t1 AT4G36770 26.050 476 257 21 6 427 4 438 1.23e-17 85.1
MS.gene91648.t1 AT2G18570 24.079 407 229 16 5 368 4 373 2.48e-17 84.3
MS.gene91648.t1 AT1G30530 21.875 448 295 12 12 427 19 443 2.49e-17 84.3
MS.gene91648.t1 AT5G17050 21.720 465 299 16 6 428 12 453 2.83e-17 84.0
MS.gene91648.t1 AT4G15260 21.196 368 209 12 119 428 7 351 3.87e-17 82.8
MS.gene91648.t1 AT5G14860 24.138 493 261 18 6 421 8 464 6.26e-17 83.2
MS.gene91648.t1 AT1G07260 21.605 486 295 16 6 428 6 468 7.80e-17 82.8
MS.gene91648.t1 AT3G53150 21.921 406 247 13 6 369 22 399 1.52e-16 82.0
MS.gene91648.t1 AT5G54010 23.025 443 262 19 1 398 1 409 2.20e-16 81.3
MS.gene91648.t1 AT5G12890 22.716 405 251 13 6 371 10 391 5.85e-16 80.1
MS.gene91648.t1 AT2G18560 27.530 247 115 10 228 432 150 374 2.16e-15 77.8
MS.gene91648.t1 AT2G29730 21.881 489 282 22 6 428 5 459 2.32e-15 78.2
MS.gene91648.t1 AT1G50580 25.000 476 270 19 1 429 1 436 4.63e-15 77.4
MS.gene91648.t1 AT2G29710 26.894 264 131 12 208 428 215 459 4.89e-15 77.4
MS.gene91648.t1 AT2G23210 23.776 286 180 9 6 270 10 278 1.61e-14 74.3
MS.gene91648.t1 AT4G27560 23.873 377 239 16 6 365 7 352 2.93e-13 71.6
MS.gene91648.t1 AT1G07240 21.859 398 253 16 7 369 6 380 4.05e-13 71.2
MS.gene91648.t1 AT5G17030 21.689 438 290 11 6 409 12 430 6.80e-13 70.5
MS.gene91648.t1 AT4G27570 24.403 377 237 16 6 365 7 352 9.64e-13 70.1
MS.gene91648.t1 AT5G17040 21.591 440 279 14 6 409 5 414 3.38e-12 68.6
MS.gene91648.t1 AT5G17040 27.014 211 108 6 225 409 122 312 8.61e-12 66.6

Find 106 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTGTTACATTTATTA+TGG 0.129790 7.4:+85778967 MS.gene91648:CDS
GAGATACAAACTATAAATTT+TGG 0.179488 7.4:+85780431 MS.gene91648:CDS
CGATCGAAAACCGGTGTTTC+CGG 0.210033 7.4:+85778779 MS.gene91648:CDS
CTAGGGCTAGTTCATTAAAT+TGG 0.232886 7.4:-85781440 None:intergenic
TTGGAAGTGGGACACAATTT+AGG 0.247177 7.4:+85778998 MS.gene91648:CDS
TTACTTCCATGGAAATCATT+AGG 0.251367 7.4:-85781537 None:intergenic
TCGCCCAACTAATAAACTTT+TGG 0.254931 7.4:-85781911 None:intergenic
TGGTAGGAACTTTGGTGATA+TGG 0.260975 7.4:-85780504 None:intergenic
ACAACAACAAAAGTTCATTT+TGG 0.269702 7.4:+85780549 MS.gene91648:CDS
GAAAATGACTATTAATAATA+TGG 0.275879 7.4:+85781860 MS.gene91648:CDS
GTGTCCATCATAGGTATATC+AGG 0.307459 7.4:-85780353 None:intergenic
TACTTCCATGGAAATCATTA+GGG 0.333367 7.4:-85781536 None:intergenic
TGTTACATTTATTATGGGTT+GGG 0.337526 7.4:+85778973 MS.gene91648:CDS
ATTTATTATGGGTTGGGCTT+TGG 0.345834 7.4:+85778979 MS.gene91648:CDS
AAGATATAACTTGCTTAGAT+TGG 0.346657 7.4:+85780576 MS.gene91648:CDS
CTAGTTCATTAAATTGGTTT+TGG 0.358155 7.4:-85781434 None:intergenic
ATATCACTTCTATCATCTTC+AGG 0.358654 7.4:-85778845 None:intergenic
AGTGACCTTGCAACCATGTT+TGG 0.359865 7.4:-85778729 None:intergenic
TTAACTTCTTCTATAAGCTT+TGG 0.364725 7.4:-85778914 None:intergenic
ATTGTTGTTACATTTATTAT+GGG 0.367194 7.4:+85778968 MS.gene91648:CDS
AAGTTTGTTGTGTCCATCAT+AGG 0.368447 7.4:-85780362 None:intergenic
ATCCCATCTTCAATAAGTTT+AGG 0.371481 7.4:-85779082 None:intergenic
CCTACCAATTGGTCCATTGA+TGG 0.377369 7.4:+85780520 MS.gene91648:CDS
TTGTTACATTTATTATGGGT+TGG 0.377839 7.4:+85778972 MS.gene91648:CDS
TATGGGTTGGGCTTTGGAAG+TGG 0.378573 7.4:+85778985 MS.gene91648:CDS
TCTCCAAAAGTTTATTAGTT+GGG 0.379670 7.4:+85781908 MS.gene91648:CDS
ACCAGCATGTACACCTTCTA+TGG 0.381997 7.4:-85781649 None:intergenic
TATAACTTGCTTAGATTGGT+TGG 0.383830 7.4:+85780580 MS.gene91648:CDS
ACATGTCCTTGACCTGGATA+TGG 0.388636 7.4:-85778674 None:intergenic
TTGTTGTTACTTTCCATCAA+TGG 0.392206 7.4:-85780533 None:intergenic
CTTTGGTAGTGTGGTAGTAA+TGG 0.394763 7.4:+85781410 MS.gene91648:intron
TCTATAAGCTTTGGAAGTCT+TGG 0.402505 7.4:-85778905 None:intergenic
GTAAAGGTAAAATTGTTAGT+TGG 0.403350 7.4:+85781556 MS.gene91648:CDS
ATCTCCAAAAGTTTATTAGT+TGG 0.404458 7.4:+85781907 MS.gene91648:CDS
TAAAGGTAAAATTGTTAGTT+GGG 0.409569 7.4:+85781557 MS.gene91648:CDS
AACCATAAACGATCGAAAAC+CGG 0.413554 7.4:+85778770 MS.gene91648:CDS
ATACCTAAACTTATTGAAGA+TGG 0.422586 7.4:+85779079 MS.gene91648:CDS
TCCAGCTTCTGCCACTACTT+TGG 0.444015 7.4:+85779042 MS.gene91648:CDS
GGTGACACTACCAGATGGTT+TGG 0.448739 7.4:+85778820 MS.gene91648:CDS
AGTTGGTGATGATGACATAA+AGG 0.450028 7.4:+85781818 MS.gene91648:CDS
CTTTCCATCAATGGACCAAT+TGG 0.450743 7.4:-85780524 None:intergenic
ATAAGCTTTGGAAGTCTTGG+AGG 0.453431 7.4:-85778902 None:intergenic
GGATGGAATTCTACCATAGA+AGG 0.456157 7.4:+85781636 MS.gene91648:CDS
AACTTGTGAGAATTGCATAA+GGG 0.457199 7.4:-85778702 None:intergenic
GATCAAAGAAGATCTTATCT+AGG 0.457542 7.4:-85780397 None:intergenic
CACTTGTATCTTGTCTTGAC+CGG 0.458387 7.4:-85778798 None:intergenic
CTCCCCTGATATACCTATGA+TGG 0.458771 7.4:+85780349 MS.gene91648:CDS
GGACCAATTGGTAGGAACTT+TGG 0.458930 7.4:-85780512 None:intergenic
TCACCAAAGTTCCTACCAAT+TGG 0.467404 7.4:+85780509 MS.gene91648:CDS
TACCTAAACTTATTGAAGAT+GGG 0.472278 7.4:+85779080 MS.gene91648:CDS
TTTCTTGTTATACCATATCC+AGG 0.475958 7.4:+85778662 MS.gene91648:CDS
TTTACCTTGTTGTCATTACT+AGG 0.478103 7.4:-85781504 None:intergenic
AATGATTTCCATGGAAGTAA+AGG 0.480314 7.4:+85781540 MS.gene91648:CDS
ATGGGTTGGGCTTTGGAAGT+GGG 0.481210 7.4:+85778986 MS.gene91648:CDS
TGTCTAGAAGATCAAGTCCT+AGG 0.486727 7.4:-85781458 None:intergenic
TTATTTAAAACCTTGGATTG+AGG 0.494243 7.4:-85780614 None:intergenic
AAGAAGGTGGATCAAGTAGT+TGG 0.496740 7.4:+85781801 MS.gene91648:CDS
TCTTCAGGTTCCAAACCATC+TGG 0.498598 7.4:-85778830 None:intergenic
GAACTTGTGAGAATTGCATA+AGG 0.502829 7.4:-85778703 None:intergenic
ACTATTAATAATATGGAAGA+AGG 0.514243 7.4:+85781867 MS.gene91648:CDS
GCCAAAGTAGTGGCAGAAGC+TGG 0.515181 7.4:-85779043 None:intergenic
GGACGAACAACCCAAAGAAA+AGG 0.516602 7.4:-85781483 None:intergenic
CTTTGGAAGTCTTGGAGGCA+TGG 0.521064 7.4:-85778897 None:intergenic
GGACACAATTTAGGAATCAA+AGG 0.524020 7.4:+85779007 MS.gene91648:CDS
GCATACCCTAATGATTTCCA+TGG 0.524493 7.4:+85781531 MS.gene91648:CDS
GACACAATTTAGGAATCAAA+GGG 0.528806 7.4:+85779008 MS.gene91648:CDS
GAATTAGAGAAAGATGATGA+TGG 0.530243 7.4:+85781753 MS.gene91648:CDS
CTTATGAAGCAAGCAACGGC+TGG 0.531258 7.4:-85781606 None:intergenic
GATGGGATTATTGATTCTGA+AGG 0.541173 7.4:+85779097 MS.gene91648:CDS
AAGGCAAGAGTTAAGAAAGA+AGG 0.546737 7.4:+85781785 MS.gene91648:CDS
ATCTTATCTAGGCCGCGCCA+TGG 0.547825 7.4:-85780386 None:intergenic
GCGGTGGTAACAGTGTTTCG+AGG 0.551168 7.4:+85781226 MS.gene91648:CDS
GCTTCATAAGTCATTGTGGA+TGG 0.554894 7.4:+85781619 MS.gene91648:CDS
TGAAGCAAGCAACGGCTGGA+TGG 0.560282 7.4:-85781602 None:intergenic
TTTGGAGATTATGTGATGAC+TGG 0.561048 7.4:-85781893 None:intergenic
GTCTAGAAGATCAAGTCCTA+GGG 0.562784 7.4:-85781457 None:intergenic
ACCATAGAAGGTGTACATGC+TGG 0.563487 7.4:+85781648 MS.gene91648:CDS
ACTGCTTATGATCTTGAGCC+TGG 0.563828 7.4:+85780473 MS.gene91648:CDS
GGTGGGTTTCGCTGCTGTAG+CGG 0.569000 7.4:+85781195 MS.gene91648:intron
TGTCCATCATAGGTATATCA+GGG 0.572365 7.4:-85780352 None:intergenic
CCATCAATGGACCAATTGGT+AGG 0.574039 7.4:-85780520 None:intergenic
GCAAGAGTTAAGAAAGAAGG+TGG 0.577406 7.4:+85781788 MS.gene91648:CDS
TCTTATCTAGGCCGCGCCAT+GGG 0.585959 7.4:-85780385 None:intergenic
CTTGTCTTGACCGGAAACAC+CGG 0.587573 7.4:-85778789 None:intergenic
CAATTTAATGAACTAGCCCT+AGG 0.592472 7.4:+85781441 MS.gene91648:CDS
GGGTTAACATGTCCTTGACC+TGG 0.597282 7.4:-85778680 None:intergenic
TATGGTATAACAAGAAAATG+TGG 0.598798 7.4:-85778656 None:intergenic
TAAGCAAGCACCTCAATCCA+AGG 0.599836 7.4:+85780604 MS.gene91648:CDS
GACAGCACACGCCAAAGTAG+TGG 0.602253 7.4:-85779053 None:intergenic
ACAACAAACTTCCCATGGCG+CGG 0.605733 7.4:+85780374 MS.gene91648:CDS
ATTAATAATATGGAAGAAGG+TGG 0.607660 7.4:+85781870 MS.gene91648:CDS
GTTATACCATATCCAGGTCA+AGG 0.608398 7.4:+85778668 MS.gene91648:CDS
ACTTGTGAGAATTGCATAAG+GGG 0.611094 7.4:-85778701 None:intergenic
TCACAAGTTCTAGCCAAACA+TGG 0.613083 7.4:+85778716 MS.gene91648:CDS
ACAGTGTTTCGAGGCTGTAA+CGG 0.613903 7.4:+85781235 MS.gene91648:CDS
TCTAGCCAAACATGGTTGCA+AGG 0.620565 7.4:+85778724 MS.gene91648:CDS
GGTGATATGGAAAATACACC+AGG 0.626519 7.4:-85780491 None:intergenic
TGGACACAACAAACTTCCCA+TGG 0.633427 7.4:+85780369 MS.gene91648:CDS
GCTTGCTTCATAAGTCATTG+TGG 0.650292 7.4:+85781615 MS.gene91648:CDS
CTTGTGAGAATTGCATAAGG+GGG 0.662045 7.4:-85778700 None:intergenic
CGGTCAAGACAAGATACAAG+TGG 0.663282 7.4:+85778799 MS.gene91648:CDS
ATGACTTATGAAGCAAGCAA+CGG 0.669823 7.4:-85781610 None:intergenic
TCGTCCTAGTAATGACAACA+AGG 0.682098 7.4:+85781500 MS.gene91648:CDS
CAAGTGGTGACACTACCAGA+TGG 0.688058 7.4:+85778815 MS.gene91648:CDS
GTCCATCATAGGTATATCAG+GGG 0.691231 7.4:-85780351 None:intergenic
ACACAATTTAGGAATCAAAG+GGG 0.750071 7.4:+85779009 MS.gene91648:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTATTAAATAAAATTGT+AGG + chr7.4:85779826-85779845 MS.gene91648:intron 10.0%
!! GAAAATGACTATTAATAATA+TGG + chr7.4:85781860-85781879 MS.gene91648:CDS 15.0%
!! TAATTCACTAAAGTAATATA+TGG + chr7.4:85780108-85780127 MS.gene91648:intron 15.0%
!! TATATTACTTTAGTGAATTA+TGG - chr7.4:85780108-85780127 None:intergenic 15.0%
!! TTAAATAAAATTGTAGGAAT+AGG + chr7.4:85779832-85779851 MS.gene91648:intron 15.0%
!!! AAATGAATATTTTATCTGTA+AGG + chr7.4:85780920-85780939 MS.gene91648:intron 15.0%
!!! ATATCAACTTTTCTTATTTA+TGG + chr7.4:85779559-85779578 MS.gene91648:intron 15.0%
!!! ATTGTTGTTACATTTATTAT+GGG + chr7.4:85778968-85778987 MS.gene91648:CDS 15.0%
!!! TATTGTTGTTACATTTATTA+TGG + chr7.4:85778967-85778986 MS.gene91648:CDS 15.0%
!!! TTTTTTGAAGAAACTAAAAT+GGG - chr7.4:85779534-85779553 None:intergenic 15.0%
!!! TTTTTTTGAAGAAACTAAAA+TGG - chr7.4:85779535-85779554 None:intergenic 15.0%
!! ACTATTAATAATATGGAAGA+AGG + chr7.4:85781867-85781886 MS.gene91648:CDS 20.0%
!! AGAAATTGATCAGTAAAAAA+TGG - chr7.4:85781693-85781712 None:intergenic 20.0%
!! ATTTAATAACTTTCTACTTC+AGG - chr7.4:85779818-85779837 None:intergenic 20.0%
!! TAAAGGTAAAATTGTTAGTT+GGG + chr7.4:85781557-85781576 MS.gene91648:CDS 20.0%
!! TTAGAGATATTGTTGTAATT+TGG + chr7.4:85780045-85780064 MS.gene91648:intron 20.0%
!!! AAACTATAAATTTTGGAGAA+TGG + chr7.4:85780438-85780457 MS.gene91648:CDS 20.0%
!!! AACAATATCTCTAAAATAGA+AGG - chr7.4:85780039-85780058 None:intergenic 20.0%
!!! ACAATATCTCTAAAATAGAA+GGG - chr7.4:85780038-85780057 None:intergenic 20.0%
!!! AGATTTCACAATTAGTATTT+TGG + chr7.4:85779144-85779163 MS.gene91648:intron 20.0%
!!! GAGATACAAACTATAAATTT+TGG + chr7.4:85780431-85780450 MS.gene91648:CDS 20.0%
!!! GATTTCACAATTAGTATTTT+GGG + chr7.4:85779145-85779164 MS.gene91648:intron 20.0%
!!! GATTTGAATTTCTTGTTTTT+TGG - chr7.4:85780330-85780349 None:intergenic 20.0%
!!! TGGTTCAATATTTTATTTTG+TGG - chr7.4:85781585-85781604 None:intergenic 20.0%
!!! TTGACTTTTAACAAGATTTA+TGG - chr7.4:85780754-85780773 None:intergenic 20.0%
! AAGTCATATGTATGATACTA+CGG - chr7.4:85780072-85780091 None:intergenic 25.0%
! AATCATATATTTGTGATGTG+TGG + chr7.4:85781718-85781737 MS.gene91648:intron 25.0%
! ATACCTAAACTTATTGAAGA+TGG + chr7.4:85779079-85779098 MS.gene91648:CDS 25.0%
! ATCTCCAAAAGTTTATTAGT+TGG + chr7.4:85781907-85781926 MS.gene91648:CDS 25.0%
! ATTAATAATATGGAAGAAGG+TGG + chr7.4:85781870-85781889 MS.gene91648:CDS 25.0%
! GAAACATATTTCACAAACAA+TGG - chr7.4:85780203-85780222 None:intergenic 25.0%
! GTAAAGGTAAAATTGTTAGT+TGG + chr7.4:85781556-85781575 MS.gene91648:CDS 25.0%
! TACCTAAACTTATTGAAGAT+GGG + chr7.4:85779080-85779099 MS.gene91648:CDS 25.0%
! TATGGTATAACAAGAAAATG+TGG - chr7.4:85778659-85778678 None:intergenic 25.0%
! TCTCCAAAAGTTTATTAGTT+GGG + chr7.4:85781908-85781927 MS.gene91648:CDS 25.0%
! TGTAACATAATATCAAGTTC+AGG + chr7.4:85780249-85780268 MS.gene91648:intron 25.0%
! TGTCAAATAATTACAAAGGT+AGG - chr7.4:85779439-85779458 None:intergenic 25.0%
! TGTCTGTCAAATAATTACAA+AGG - chr7.4:85779443-85779462 None:intergenic 25.0%
! TGTTACATTTATTATGGGTT+GGG + chr7.4:85778973-85778992 MS.gene91648:CDS 25.0%
! TTAACTTCTTCTATAAGCTT+TGG - chr7.4:85778917-85778936 None:intergenic 25.0%
! TTGTTACATTTATTATGGGT+TGG + chr7.4:85778972-85778991 MS.gene91648:CDS 25.0%
!! ACAACAACAAAAGTTCATTT+TGG + chr7.4:85780549-85780568 MS.gene91648:CDS 25.0%
!! ATTCATTTTGTGTCAATATG+TGG - chr7.4:85780908-85780927 None:intergenic 25.0%
!! TTAGTGACATTCATTAGTTT+GGG + chr7.4:85780778-85780797 MS.gene91648:intron 25.0%
!! TTATTTAAAACCTTGGATTG+AGG - chr7.4:85780617-85780636 None:intergenic 25.0%
!!! AAGATATAACTTGCTTAGAT+TGG + chr7.4:85780576-85780595 MS.gene91648:CDS 25.0%
!!! AAGGTTTTAAATAACGGTAA+CGG + chr7.4:85780623-85780642 MS.gene91648:intron 25.0%
!!! ATGATGATGGTTTTATATCA+AGG + chr7.4:85781766-85781785 MS.gene91648:CDS 25.0%
!!! CAATCCAAGGTTTTAAATAA+CGG + chr7.4:85780617-85780636 MS.gene91648:intron 25.0%
!!! CTAGTTCATTAAATTGGTTT+TGG - chr7.4:85781437-85781456 None:intergenic 25.0%
!!! GGTAATACTTTTTACTGTTT+TGG + chr7.4:85779118-85779137 MS.gene91648:intron 25.0%
!!! TGAATAAGAAACTAGCTTTA+TGG - chr7.4:85779180-85779199 None:intergenic 25.0%
!!! TGAATTTCTTGTTTTTTGGT+GGG - chr7.4:85780326-85780345 None:intergenic 25.0%
!!! TTGAATTTCTTGTTTTTTGG+TGG - chr7.4:85780327-85780346 None:intergenic 25.0%
AACTTGTGAGAATTGCATAA+GGG - chr7.4:85778705-85778724 None:intergenic 30.0%
AATGATTTCCATGGAAGTAA+AGG + chr7.4:85781540-85781559 MS.gene91648:CDS 30.0%
ACACAATTTAGGAATCAAAG+GGG + chr7.4:85779009-85779028 MS.gene91648:CDS 30.0%
ATATCACTTCTATCATCTTC+AGG - chr7.4:85778848-85778867 None:intergenic 30.0%
ATCCCATCTTCAATAAGTTT+AGG - chr7.4:85779085-85779104 None:intergenic 30.0%
GAAACATATATGACAGATTG+AGG - chr7.4:85781390-85781409 None:intergenic 30.0%
GAATTAGAGAAAGATGATGA+TGG + chr7.4:85781753-85781772 MS.gene91648:CDS 30.0%
GACACAATTTAGGAATCAAA+GGG + chr7.4:85779008-85779027 MS.gene91648:CDS 30.0%
GATCAAAGAAGATCTTATCT+AGG - chr7.4:85780400-85780419 None:intergenic 30.0%
GATCATTTGTTTATGCAACA+CGG - chr7.4:85780175-85780194 None:intergenic 30.0%
GTAGTATCATACATATGACT+TGG + chr7.4:85780071-85780090 MS.gene91648:intron 30.0%
GTTAGTGACATTCATTAGTT+TGG + chr7.4:85780777-85780796 MS.gene91648:intron 30.0%
TACTTCCATGGAAATCATTA+GGG - chr7.4:85781539-85781558 None:intergenic 30.0%
TCTGTCATATATGTTTCCTT+TGG + chr7.4:85781393-85781412 MS.gene91648:intron 30.0%
TTACTTCCATGGAAATCATT+AGG - chr7.4:85781540-85781559 None:intergenic 30.0%
TTCACTCTCACTCTTAATTT+GGG - chr7.4:85781059-85781078 None:intergenic 30.0%
TTTCACTCTCACTCTTAATT+TGG - chr7.4:85781060-85781079 None:intergenic 30.0%
! AATAATGCCTCTTTTGTGTA+CGG + chr7.4:85779362-85779381 MS.gene91648:intron 30.0%
! AGATGAGATGAGATTTTAGA+GGG - chr7.4:85781012-85781031 None:intergenic 30.0%
! CAATTTTACCTTTACTTCCA+TGG - chr7.4:85781551-85781570 None:intergenic 30.0%
! GTTACCGTTATTTAAAACCT+TGG - chr7.4:85780624-85780643 None:intergenic 30.0%
! TTGAGGCAAGGTTTAAAATA+CGG - chr7.4:85781373-85781392 None:intergenic 30.0%
! TTTACCTTGTTGTCATTACT+AGG - chr7.4:85781507-85781526 None:intergenic 30.0%
! TTTCTTGTTATACCATATCC+AGG + chr7.4:85778662-85778681 MS.gene91648:CDS 30.0%
! TTTTCTTCTCAGCGTTAAAA+CGG + chr7.4:85781285-85781304 MS.gene91648:intron 30.0%
!! AGATTTTAGAGGGGAAAAAA+TGG - chr7.4:85781002-85781021 None:intergenic 30.0%
!! CTATAAATTTTGGAGAATGG+TGG + chr7.4:85780441-85780460 MS.gene91648:CDS 30.0%
!! CTTCATCTGTTTCTTTTCTT+TGG - chr7.4:85781140-85781159 None:intergenic 30.0%
!! GATTTTAGAGGGGAAAAAAT+GGG - chr7.4:85781001-85781020 None:intergenic 30.0%
!! TATAACTTGCTTAGATTGGT+TGG + chr7.4:85780580-85780599 MS.gene91648:CDS 30.0%
!! TTGTTGTTACTTTCCATCAA+TGG - chr7.4:85780536-85780555 None:intergenic 30.0%
!! TTTTTCTGTCATCTCTAGAA+TGG - chr7.4:85779309-85779328 None:intergenic 30.0%
AAAACGGCAAATAACGGTAA+CGG + chr7.4:85781301-85781320 MS.gene91648:intron 35.0%
AACCATAAACGATCGAAAAC+CGG + chr7.4:85778770-85778789 MS.gene91648:CDS 35.0%
AACTTTCTACTTCAGGATTG+TGG - chr7.4:85779811-85779830 None:intergenic 35.0%
AAGGCAAGAGTTAAGAAAGA+AGG + chr7.4:85781785-85781804 MS.gene91648:CDS 35.0%
AAGTTAAGTTCCACGCTTAT+TGG + chr7.4:85779327-85779346 MS.gene91648:intron 35.0%
ACTTGTGAGAATTGCATAAG+GGG - chr7.4:85778704-85778723 None:intergenic 35.0%
AGAAGAAGCTAGAAAGAAGA+AGG - chr7.4:85780847-85780866 None:intergenic 35.0%
AGAGTGAAATTAGTTAGAGG+AGG + chr7.4:85781071-85781090 MS.gene91648:intron 35.0%
AGCGTTAAAACGGCAAATAA+CGG + chr7.4:85781295-85781314 MS.gene91648:intron 35.0%
ATAGACACATAAGAGAGGAA+GGG + chr7.4:85779974-85779993 MS.gene91648:intron 35.0%
ATATATGACAGATTGAGGCA+AGG - chr7.4:85781385-85781404 None:intergenic 35.0%
ATGACTTATGAAGCAAGCAA+CGG - chr7.4:85781613-85781632 None:intergenic 35.0%
CAATTTAATGAACTAGCCCT+AGG + chr7.4:85781441-85781460 MS.gene91648:CDS 35.0%
CGATACCCAAACAAAACAAA+GGG - chr7.4:85779409-85779428 None:intergenic 35.0%
GAACTTGTGAGAATTGCATA+AGG - chr7.4:85778706-85778725 None:intergenic 35.0%
GGAATTTGTGTATGAGAGTT+TGG - chr7.4:85780947-85780966 None:intergenic 35.0%
GGACACAATTTAGGAATCAA+AGG + chr7.4:85779007-85779026 MS.gene91648:CDS 35.0%
GTGAGAGTGAAATTAGTTAG+AGG + chr7.4:85781068-85781087 MS.gene91648:intron 35.0%
TGTCCATCATAGGTATATCA+GGG - chr7.4:85780355-85780374 None:intergenic 35.0%
TTTGGAGATTATGTGATGAC+TGG - chr7.4:85781896-85781915 None:intergenic 35.0%
! GAGATGAGATGAGATTTTAG+AGG - chr7.4:85781013-85781032 None:intergenic 35.0%
! TCGCCCAACTAATAAACTTT+TGG - chr7.4:85781914-85781933 None:intergenic 35.0%
! TCTAGACAAGCCTTTTCTTT+GGG + chr7.4:85781473-85781492 MS.gene91648:CDS 35.0%
! TGAGGCAAGGTTTAAAATAC+GGG - chr7.4:85781372-85781391 None:intergenic 35.0%
! TTAAATAACGGTAACGGTTG+CGG + chr7.4:85780629-85780648 MS.gene91648:intron 35.0%
! TTCTAGACAAGCCTTTTCTT+TGG + chr7.4:85781472-85781491 MS.gene91648:CDS 35.0%
!! AAGTTTGTTGTGTCCATCAT+AGG - chr7.4:85780365-85780384 None:intergenic 35.0%
!! AGTTGGTGATGATGACATAA+AGG + chr7.4:85781818-85781837 MS.gene91648:CDS 35.0%
!! ATATGTTTCCTTTGGTAGTG+TGG + chr7.4:85781401-85781420 MS.gene91648:intron 35.0%
!! ATTTATTATGGGTTGGGCTT+TGG + chr7.4:85778979-85778998 MS.gene91648:CDS 35.0%
!! CTAGGGCTAGTTCATTAAAT+TGG - chr7.4:85781443-85781462 None:intergenic 35.0%
!! GATGAGATGAGATTTTAGAG+GGG - chr7.4:85781011-85781030 None:intergenic 35.0%
!! GATGGGATTATTGATTCTGA+AGG + chr7.4:85779097-85779116 MS.gene91648:CDS 35.0%
!! TCTATAAGCTTTGGAAGTCT+TGG - chr7.4:85778908-85778927 None:intergenic 35.0%
!!! AAGGTCACTTTTCTACATAC+TGG + chr7.4:85778743-85778762 MS.gene91648:CDS 35.0%
!!! AGGTCACTTTTCTACATACT+GGG + chr7.4:85778744-85778763 MS.gene91648:CDS 35.0%
!!! CCTTTGTTTTGTTTGGGTAT+CGG + chr7.4:85779407-85779426 MS.gene91648:intron 35.0%
AAGAAGGTGGATCAAGTAGT+TGG + chr7.4:85781801-85781820 MS.gene91648:CDS 40.0%
AAGCTAGAAAGAAGAAGGTG+AGG - chr7.4:85780842-85780861 None:intergenic 40.0%
ATTTGTGATGTGTGGAAGAC+TGG + chr7.4:85781726-85781745 MS.gene91648:intron 40.0%
CACTTGTATCTTGTCTTGAC+CGG - chr7.4:85778801-85778820 None:intergenic 40.0%
CATAGACACATAAGAGAGGA+AGG + chr7.4:85779973-85779992 MS.gene91648:intron 40.0%
CATTACTACCACACTACCAA+AGG - chr7.4:85781412-85781431 None:intergenic 40.0%
CCGATACCCAAACAAAACAA+AGG - chr7.4:85779410-85779429 None:intergenic 40.0%
CTTGTGAGAATTGCATAAGG+GGG - chr7.4:85778703-85778722 None:intergenic 40.0%
CTTTCCATCAATGGACCAAT+TGG - chr7.4:85780527-85780546 None:intergenic 40.0%
GACTCATAGACACATAAGAG+AGG + chr7.4:85779969-85779988 MS.gene91648:intron 40.0%
GATCATTTCTTCAGCTTCTG+TGG + chr7.4:85779219-85779238 MS.gene91648:intron 40.0%
GCAAGAGTTAAGAAAGAAGG+TGG + chr7.4:85781788-85781807 MS.gene91648:CDS 40.0%
GCATACCCTAATGATTTCCA+TGG + chr7.4:85781531-85781550 MS.gene91648:CDS 40.0%
GCTTCATAAGTCATTGTGGA+TGG + chr7.4:85781619-85781638 MS.gene91648:CDS 40.0%
GCTTGCTTCATAAGTCATTG+TGG + chr7.4:85781615-85781634 MS.gene91648:CDS 40.0%
GGATGGAATTCTACCATAGA+AGG + chr7.4:85781636-85781655 MS.gene91648:CDS 40.0%
GGTGATATGGAAAATACACC+AGG - chr7.4:85780494-85780513 None:intergenic 40.0%
GTCCATCATAGGTATATCAG+GGG - chr7.4:85780354-85780373 None:intergenic 40.0%
GTCTAGAAGATCAAGTCCTA+GGG - chr7.4:85781460-85781479 None:intergenic 40.0%
GTGTCCATCATAGGTATATC+AGG - chr7.4:85780356-85780375 None:intergenic 40.0%
GTTATACCATATCCAGGTCA+AGG + chr7.4:85778668-85778687 MS.gene91648:CDS 40.0%
TAGACACATAAGAGAGGAAG+GGG + chr7.4:85779975-85779994 MS.gene91648:intron 40.0%
TCACCAAAGTTCCTACCAAT+TGG + chr7.4:85780509-85780528 MS.gene91648:CDS 40.0%
TCGTCCTAGTAATGACAACA+AGG + chr7.4:85781500-85781519 MS.gene91648:CDS 40.0%
TGTCTAGAAGATCAAGTCCT+AGG - chr7.4:85781461-85781480 None:intergenic 40.0%
TTAAGTTCCACGCTTATTGG+TGG + chr7.4:85779330-85779349 MS.gene91648:intron 40.0%
TTGGAAGTGGGACACAATTT+AGG + chr7.4:85778998-85779017 MS.gene91648:CDS 40.0%
! CGTTAAGGTTTTCACGGTTT+CGG + chr7.4:85780661-85780680 MS.gene91648:intron 40.0%
! GAGTTGATTGTGTCTTTGTG+TGG - chr7.4:85780968-85780987 None:intergenic 40.0%
! TCACAAGTTCTAGCCAAACA+TGG + chr7.4:85778716-85778735 MS.gene91648:CDS 40.0%
! TGGCCTATACCGTTTTGTAA+CGG + chr7.4:85781327-85781346 MS.gene91648:intron 40.0%
! TGGTAGGAACTTTGGTGATA+TGG - chr7.4:85780507-85780526 None:intergenic 40.0%
! TTTTGTGTGTGTGGCTCATT+TGG + chr7.4:85779243-85779262 MS.gene91648:intron 40.0%
!! ATAAGCTTTGGAAGTCTTGG+AGG - chr7.4:85778905-85778924 None:intergenic 40.0%
!! CTTTGGTAGTGTGGTAGTAA+TGG + chr7.4:85781410-85781429 MS.gene91648:intron 40.0%
!!! TCGGACCCTTTGTTTTGTTT+GGG + chr7.4:85779401-85779420 MS.gene91648:intron 40.0%
AAAGAAGAAGGTGAGGTGAG+AGG - chr7.4:85780835-85780854 None:intergenic 45.0%
AAGGTGAGGTGAGAGGAATT+GGG - chr7.4:85780828-85780847 None:intergenic 45.0%
ACAGTGTTTCGAGGCTGTAA+CGG + chr7.4:85781235-85781254 MS.gene91648:CDS 45.0%
ACATGTCCTTGACCTGGATA+TGG - chr7.4:85778677-85778696 None:intergenic 45.0%
ACCAGCATGTACACCTTCTA+TGG - chr7.4:85781652-85781671 None:intergenic 45.0%
ACTATGTTTCGCGGTTGCAA+AGG + chr7.4:85781174-85781193 MS.gene91648:intron 45.0%
ACTGCTTATGATCTTGAGCC+TGG + chr7.4:85780473-85780492 MS.gene91648:CDS 45.0%
AGCACAAGGTGTGCTAAAGA+AGG - chr7.4:85779481-85779500 None:intergenic 45.0%
AGTGACCTTGCAACCATGTT+TGG - chr7.4:85778732-85778751 None:intergenic 45.0%
CCACTGCGACTAAAGAGTAA+CGG - chr7.4:85780139-85780158 None:intergenic 45.0%
CCATCAATGGACCAATTGGT+AGG - chr7.4:85780523-85780542 None:intergenic 45.0%
CCTACCAATTGGTCCATTGA+TGG + chr7.4:85780520-85780539 MS.gene91648:CDS 45.0%
CCTTTAACCACCAATAAGCG+TGG - chr7.4:85779340-85779359 None:intergenic 45.0%
CGATATCGGCCGTTACAAAA+CGG - chr7.4:85781339-85781358 None:intergenic 45.0%
CGGTCAAGACAAGATACAAG+TGG + chr7.4:85778799-85778818 MS.gene91648:CDS 45.0%
CTCACAACCGTACACAAAAG+AGG - chr7.4:85779372-85779391 None:intergenic 45.0%
CTCCCCTGATATACCTATGA+TGG + chr7.4:85780349-85780368 MS.gene91648:CDS 45.0%
GCAACCGCGAAACATAGTTA+CGG - chr7.4:85781172-85781191 None:intergenic 45.0%
GCATCCGTAACTATGTTTCG+CGG + chr7.4:85781165-85781184 MS.gene91648:intron 45.0%
GGACCAATTGGTAGGAACTT+TGG - chr7.4:85780515-85780534 None:intergenic 45.0%
GGACGAACAACCCAAAGAAA+AGG - chr7.4:85781486-85781505 None:intergenic 45.0%
GGATTTCCTGCAATGCGAAA+AGG - chr7.4:85780305-85780324 None:intergenic 45.0%
TAAGCAAGCACCTCAATCCA+AGG + chr7.4:85780604-85780623 MS.gene91648:CDS 45.0%
TACTCTTTAGTCGCAGTGGT+AGG + chr7.4:85780140-85780159 MS.gene91648:intron 45.0%
TAGCACACCTTGTGCTTAAG+AGG + chr7.4:85779485-85779504 MS.gene91648:intron 45.0%
TCTAGCCAAACATGGTTGCA+AGG + chr7.4:85778724-85778743 MS.gene91648:CDS 45.0%
TGCCTCCTCTTCAATCTTCA+TGG - chr7.4:85781097-85781116 None:intergenic 45.0%
TGGACACAACAAACTTCCCA+TGG + chr7.4:85780369-85780388 MS.gene91648:CDS 45.0%
! ACCATAGAAGGTGTACATGC+TGG + chr7.4:85781648-85781667 MS.gene91648:CDS 45.0%
! CCACGCTTATTGGTGGTTAA+AGG + chr7.4:85779337-85779356 MS.gene91648:intron 45.0%
! CGGATGCGTTAAGGTTTTCA+CGG + chr7.4:85780655-85780674 MS.gene91648:intron 45.0%
! TCTTCAGGTTCCAAACCATC+TGG - chr7.4:85778833-85778852 None:intergenic 45.0%
! TGATCTCCTTTTCGCATTGC+AGG + chr7.4:85780296-85780315 MS.gene91648:intron 45.0%
! TTCTGTGGCTTTTGTGTGTG+TGG + chr7.4:85779234-85779253 MS.gene91648:intron 45.0%
! TTTTGTAACGGCCGATATCG+CGG + chr7.4:85781339-85781358 MS.gene91648:intron 45.0%
!!! CACCGGTTTTCGATCGTTTA+TGG - chr7.4:85778775-85778794 None:intergenic 45.0%
!!! GTCGGACCCTTTGTTTTGTT+TGG + chr7.4:85779400-85779419 MS.gene91648:intron 45.0%
ACAACAAACTTCCCATGGCG+CGG + chr7.4:85780374-85780393 MS.gene91648:CDS 50.0%
AGAGACGCCTCTTAAGCACA+AGG - chr7.4:85779495-85779514 None:intergenic 50.0%
ATGTTTCGCGGTTGCAAAGG+TGG + chr7.4:85781177-85781196 MS.gene91648:intron 50.0%
CAAGTGGTGACACTACCAGA+TGG + chr7.4:85778815-85778834 MS.gene91648:CDS 50.0%
CCGTTACTCTTTAGTCGCAG+TGG + chr7.4:85780136-85780155 MS.gene91648:intron 50.0%
CGATCGAAAACCGGTGTTTC+CGG + chr7.4:85778779-85778798 MS.gene91648:CDS 50.0%
CGGACGTTGCGTACATATTG+CGG + chr7.4:85780691-85780710 MS.gene91648:intron 50.0%
CGGCCGTTACAAAACGGTAT+AGG - chr7.4:85781333-85781352 None:intergenic 50.0%
CTGGTGTACGTTTCTTGTGC+TGG + chr7.4:85781667-85781686 MS.gene91648:intron 50.0%
CTTATGAAGCAAGCAACGGC+TGG - chr7.4:85781609-85781628 None:intergenic 50.0%
CTTGTCTTGACCGGAAACAC+CGG - chr7.4:85778792-85778811 None:intergenic 50.0%
GAAGGTGAGGTGAGAGGAAT+TGG - chr7.4:85780829-85780848 None:intergenic 50.0%
GAATTGGGCGTAGTTGGGTT+AGG - chr7.4:85780813-85780832 None:intergenic 50.0%
GAGAGGAATTGGGCGTAGTT+GGG - chr7.4:85780818-85780837 None:intergenic 50.0%
GCTGTAACGGCGTTACGTAA+CGG + chr7.4:85781248-85781267 MS.gene91648:intron 50.0%
GGAGGCCATGAAGATTGAAG+AGG + chr7.4:85781089-85781108 MS.gene91648:intron 50.0%
GGCCATGAAGATTGAAGAGG+AGG + chr7.4:85781092-85781111 MS.gene91648:intron 50.0%
GGGTTAACATGTCCTTGACC+TGG - chr7.4:85778683-85778702 None:intergenic 50.0%
GGTGACACTACCAGATGGTT+TGG + chr7.4:85778820-85778839 MS.gene91648:CDS 50.0%
GTCGCAGTGGTAGGTACATT+TGG + chr7.4:85780149-85780168 MS.gene91648:intron 50.0%
TCCAGCTTCTGCCACTACTT+TGG + chr7.4:85779042-85779061 MS.gene91648:CDS 50.0%
TGAGAGGAATTGGGCGTAGT+TGG - chr7.4:85780819-85780838 None:intergenic 50.0%
TGGGAGGTGATCATCTAGCA+TGG + chr7.4:85780000-85780019 MS.gene91648:intron 50.0%
TGTTTCGCGGTTGCAAAGGT+GGG + chr7.4:85781178-85781197 MS.gene91648:intron 50.0%
TTCACGGTTTCGGACTGTCA+CGG + chr7.4:85780671-85780690 MS.gene91648:intron 50.0%
TTGTGTACGGTTGTGAGCAG+TGG + chr7.4:85779375-85779394 MS.gene91648:intron 50.0%
! CTTTGGAAGTCTTGGAGGCA+TGG - chr7.4:85778900-85778919 None:intergenic 50.0%
! GCAAATAACGGTAACGGCGA+TGG + chr7.4:85781307-85781326 MS.gene91648:intron 50.0%
!! ATGGGTTGGGCTTTGGAAGT+GGG + chr7.4:85778986-85779005 MS.gene91648:CDS 50.0%
!! TATGGGTTGGGCTTTGGAAG+TGG + chr7.4:85778985-85779004 MS.gene91648:CDS 50.0%
ACATAAGAGAGGAAGGGGCG+TGG + chr7.4:85779980-85779999 MS.gene91648:intron 55.0%
ATCTTATCTAGGCCGCGCCA+TGG - chr7.4:85780389-85780408 None:intergenic 55.0%
CGGGAACGTTACCGCGATAT+CGG - chr7.4:85781353-85781372 None:intergenic 55.0%
CGTACATATTGCGGTCGTCG+CGG + chr7.4:85780700-85780719 MS.gene91648:intron 55.0%
GACAGCACACGCCAAAGTAG+TGG - chr7.4:85779056-85779075 None:intergenic 55.0%
GCCAAAGTAGTGGCAGAAGC+TGG - chr7.4:85779046-85779065 None:intergenic 55.0%
GCGGTGGTAACAGTGTTTCG+AGG + chr7.4:85781226-85781245 MS.gene91648:CDS 55.0%
TCTTATCTAGGCCGCGCCAT+GGG - chr7.4:85780388-85780407 None:intergenic 55.0%
TGAAGCAAGCAACGGCTGGA+TGG - chr7.4:85781605-85781624 None:intergenic 55.0%
TGTACGGTTGTGAGCAGTGG+CGG + chr7.4:85779378-85779397 MS.gene91648:intron 55.0%
TTGCGGTCACGGATGCGTTA+AGG + chr7.4:85780646-85780665 MS.gene91648:intron 55.0%
! AACGGTAACGGTTGCGGTCA+CGG + chr7.4:85780635-85780654 MS.gene91648:intron 55.0%
! CATAAGAGAGGAAGGGGCGT+GGG + chr7.4:85779981-85780000 MS.gene91648:intron 55.0%
! GGCGTAGTTGGGTTAGGTGA+GGG - chr7.4:85780807-85780826 None:intergenic 55.0%
! TGCTGTAGCGGCGAGTTTTG+CGG + chr7.4:85781207-85781226 MS.gene91648:CDS 55.0%
! GGGCGTAGTTGGGTTAGGTG+AGG - chr7.4:85780808-85780827 None:intergenic 60.0%
! GGTGGGTTTCGCTGCTGTAG+CGG + chr7.4:85781195-85781214 MS.gene91648:intron 60.0%
! TGTAGCGGCGAGTTTTGCGG+TGG + chr7.4:85781210-85781229 MS.gene91648:CDS 60.0%
CGGTTGTGAGCAGTGGCGGT+CGG + chr7.4:85779382-85779401 MS.gene91648:intron 65.0%
! AAGAGAGGAAGGGGCGTGGG+AGG + chr7.4:85779984-85780003 MS.gene91648:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 85778644 85781938 85778644 ID=MS.gene91648
chr7.4 mRNA 85778644 85781938 85778644 ID=MS.gene91648.t1;Parent=MS.gene91648
chr7.4 exon 85778644 85779118 85778644 ID=MS.gene91648.t1.exon1;Parent=MS.gene91648.t1
chr7.4 CDS 85778644 85779118 85778644 ID=cds.MS.gene91648.t1;Parent=MS.gene91648.t1
chr7.4 exon 85780318 85780625 85780318 ID=MS.gene91648.t1.exon2;Parent=MS.gene91648.t1
chr7.4 CDS 85780318 85780625 85780318 ID=cds.MS.gene91648.t1;Parent=MS.gene91648.t1
chr7.4 exon 85781196 85781263 85781196 ID=MS.gene91648.t1.exon3;Parent=MS.gene91648.t1
chr7.4 CDS 85781196 85781263 85781196 ID=cds.MS.gene91648.t1;Parent=MS.gene91648.t1
chr7.4 exon 85781419 85781671 85781419 ID=MS.gene91648.t1.exon4;Parent=MS.gene91648.t1
chr7.4 CDS 85781419 85781671 85781419 ID=cds.MS.gene91648.t1;Parent=MS.gene91648.t1
chr7.4 exon 85781744 85781938 85781744 ID=MS.gene91648.t1.exon5;Parent=MS.gene91648.t1
chr7.4 CDS 85781744 85781938 85781744 ID=cds.MS.gene91648.t1;Parent=MS.gene91648.t1
Gene Sequence

>MS.gene91648

ATGGGTGTATTGCCACATTTTCTTGTTATACCATATCCAGGTCAAGGACATGTTAACCCCCTTATGCAATTCTCACAAGTTCTAGCCAAACATGGTTGCAAGGTCACTTTTCTACATACTGGGTTTAACCATAAACGATCGAAAACCGGTGTTTCCGGTCAAGACAAGATACAAGTGGTGACACTACCAGATGGTTTGGAACCTGAAGATGATAGAAGTGATATGAAGAAAGTTCTATTATCAATTAAAAGCACCATGCCTCCAAGACTTCCAAAGCTTATAGAAGAAGTTAATGCTTTGAATGTTGACAACAAGATCAATTGTATTGTTGTTACATTTATTATGGGTTGGGCTTTGGAAGTGGGACACAATTTAGGAATCAAAGGGGCTCTACTTTGTCCAGCTTCTGCCACTACTTTGGCGTGTGCTGTCTTCATACCTAAACTTATTGAAGATGGGATTATTGATTCTGAAGGTAATACTTTTTACTGTTTTGGTATAGATTTCACAATTAGTATTTTGGGAATAGAATTCCATAAAGCTAGTTTCTTATTCATCAATTTTGTTGTTATCATGATCATTTCTTCAGCTTCTGTGGCTTTTGTGTGTGTGGCTCATTTGGAAAGAACGTAATAATAGAATCTTTAATAATATTAATTCTTCCATTCTAGAGATGACAGAAAAAGTTAAGTTCCACGCTTATTGGTGGTTAAAGGCGAATAATGCCTCTTTTGTGTACGGTTGTGAGCAGTGGCGGTCGGACCCTTTGTTTTGTTTGGGTATCGGTTGATGCCTACCTTTGTAATTATTTGACAGACACTTTGTTCTTGAGCGCCTTCTTTAGCACACCTTGTGCTTAAGAGGCGTCTCTATTATTGTTAATATATCCCATTTTAGTTTCTTCAAAAAAAAAAAATATCAACTTTTCTTATTTATGGAATGAACATTTCACATTATTTTATTATTGTAAAAATTTAAGAAGATAGTTATATCAATTTTAATAGTATTAAAAACATTTTGTATTACAAAATATATAAAAATATATATATTTAAAGTAAAAGTTATATGAATTTAAATAACGTATGTTTTTTTAATAAATAATTTAAATAACATATGTTAATAATTTTTTTTAAACTAAACAATTTAAAATTCAAACAAAACAGACCACAATCCTGAAGTAGAAAGTTATTAAATAAAATTGTAGGAATAGGAGTAAATAGTCATATTTCTCGTCAACAATTTTTTTTTAATAAACTCATCATCTCAATTAAAACTTATCTAGCTTATGATTATTCTAATTTGTTTTCAATTAATTTGTTGAGCATGACTCATAGACACATAAGAGAGGAAGGGGCGTGGGAGGTGATCATCTAGCATGGCATTGCAAAGTTCCCTTCTATTTTAGAGATATTGTTGTAATTTGGACCGTAGTATCATACATATGACTTGGAAAATTGTAAACCATAATTCACTAAAGTAATATATGGAACTACCGTTACTCTTTAGTCGCAGTGGTAGGTACATTTGGCCGTGTTGCATAAACAAATGATCATGTTCCATTGTTTGTGAAATATGTTTCTATAATCTTTTGTAACTAATTCTTGATGTAACATAATATCAAGTTCAGGTTGAGATTAACATAAAATATTTCATGATCTCCTTTTCGCATTGCAGGAAATCCCACCAAAAAACAAGAAATTCAAATCTCCCCTGATATACCTATGATGGACACAACAAACTTCCCATGGCGCGGCCTAGATAAGATCTTCTTTGATCATTTTGTGCAAGAGATACAAACTATAAATTTTGGAGAATGGTGGCTTTGCAACACTGCTTATGATCTTGAGCCTGGTGTATTTTCCATATCACCAAAGTTCCTACCAATTGGTCCATTGATGGAAAGTAACAACAACAAAAGTTCATTTTGGCAAGAAGATATAACTTGCTTAGATTGGTTGGATAAGCAAGCACCTCAATCCAAGGTTTTAAATAACGGTAACGGTTGCGGTCACGGATGCGTTAAGGTTTTCACGGTTTCGGACTGTCACGGACGTTGCGTACATATTGCGGTCGTCGCGGTGTGAATTAATCACATTGTTGCACAAAACCATAAATCTTGTTAAAAGTCAATAAGTTAGTGACATTCATTAGTTTGGGATTCCCTCACCTAACCCAACTACGCCCAATTCCTCTCACCTCACCTTCTTCTTTCTAGCTTCTTCTTCTTTCTCACTTCTTTCTCACAAAACAGAAGCAAGCAGCCACATATTGACACAAAATGAATATTTTATCTGTAAGGTCCAAACTCTCATACACAAATTCCACACAAAGACACAATCAACTCAACTTAAAGTCCCATTTTTTCCCCTCTAAAATCTCATCTCATCTCTGATACAAATTTACAGAACAACACCCAAATTAAGAGTGAGAGTGAAATTAGTTAGAGGAGGCCATGAAGATTGAAGAGGAGGCAATGAAAATTGAATAATGAAGCCAAAGAAAAGAAACAGATGAAGTTTTTGCATCCGTAACTATGTTTCGCGGTTGCAAAGGTGGGTTTCGCTGCTGTAGCGGCGAGTTTTGCGGTGGTAACAGTGTTTCGAGGCTGTAACGGCGTTACGTAACGGCGTTTCAGTGTGATTTTTCTTCTCAGCGTTAAAACGGCAAATAACGGTAACGGCGATGGCCTATACCGTTTTGTAACGGCCGATATCGCGGTAACGTTCCCGTATTTTAAACCTTGCCTCAATCTGTCATATATGTTTCCTTTGGTAGTGTGGTAGTAATGGACCAAAACCAATTTAATGAACTAGCCCTAGGACTTGATCTTCTAGACAAGCCTTTTCTTTGGGTTGTTCGTCCTAGTAATGACAACAAGGTAAACTATGCATACCCTAATGATTTCCATGGAAGTAAAGGTAAAATTGTTAGTTGGGCACCACAAAATAAAATATTGAACCATCCAGCCGTTGCTTGCTTCATAAGTCATTGTGGATGGAATTCTACCATAGAAGGTGTACATGCTGGTGTACGTTTCTTGTGCTGGCCATTTTTTACTGATCAATTTCTCAATAAATCATATATTTGTGATGTGTGGAAGACTGGACTTGAATTAGAGAAAGATGATGATGGTTTTATATCAAGGCAAGAGTTAAGAAAGAAGGTGGATCAAGTAGTTGGTGATGATGACATAAAGGCAATGTGTTTGAAAATGAAGAAAATGACTATTAATAATATGGAAGAAGGTGGCCAGTCATCACATAATCTCCAAAAGTTTATTAGTTGGGCGAATTAA

Protein sequence

>MS.gene91648.t1

MGVLPHFLVIPYPGQGHVNPLMQFSQVLAKHGCKVTFLHTGFNHKRSKTGVSGQDKIQVVTLPDGLEPEDDRSDMKKVLLSIKSTMPPRLPKLIEEVNALNVDNKINCIVVTFIMGWALEVGHNLGIKGALLCPASATTLACAVFIPKLIEDGIIDSEGNPTKKQEIQISPDIPMMDTTNFPWRGLDKIFFDHFVQEIQTINFGEWWLCNTAYDLEPGVFSISPKFLPIGPLMESNNNKSSFWQEDITCLDWLDKQAPQSKVGFAAVAASFAVVTVFRGCNGVTVVVMDQNQFNELALGLDLLDKPFLWVVRPSNDNKVNYAYPNDFHGSKGKIVSWAPQNKILNHPAVACFISHCGWNSTIEGVHAGTGLELEKDDDGFISRQELRKKVDQVVGDDDIKAMCLKMKKMTINNMEEGGQSSHNLQKFISWAN