AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035689

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035689.t1 MTR_4g128690 96.256 454 17 0 1 454 1 454 0.0 900
MS.gene035689.t1 MTR_4g128720 76.586 457 104 1 1 454 1 457 0.0 721
MS.gene035689.t1 MTR_3g479490 27.848 474 296 12 14 449 5 470 5.21e-53 185
MS.gene035689.t1 MTR_5g035580 28.875 471 292 12 7 454 5 455 1.93e-52 183
MS.gene035689.t1 MTR_6g038240 29.158 463 286 14 11 449 7 451 3.71e-52 182
MS.gene035689.t1 MTR_8g083290 28.870 478 282 16 15 452 4 463 4.25e-52 182
MS.gene035689.t1 MTR_0288s0020 30.149 471 286 13 10 452 5 460 2.64e-51 180
MS.gene035689.t1 MTR_3g479520 26.994 489 313 12 1 452 1 482 4.26e-51 180
MS.gene035689.t1 MTR_2g009740 34.268 321 143 6 25 340 21 278 7.72e-51 174
MS.gene035689.t1 MTR_0036s0220 29.498 478 291 15 12 452 9 477 1.01e-50 179
MS.gene035689.t1 MTR_3g069690 28.821 458 297 11 7 449 3 446 3.45e-50 177
MS.gene035689.t1 MTR_8g066610 30.346 491 279 14 11 454 5 479 3.76e-50 177
MS.gene035689.t1 MTR_5g464810 29.668 482 285 15 12 452 9 477 4.09e-50 177
MS.gene035689.t1 MTR_5g064240 29.668 482 285 15 12 452 9 477 4.09e-50 177
MS.gene035689.t1 MTR_5g035560 29.565 460 293 9 7 449 3 448 6.55e-50 177
MS.gene035689.t1 MTR_0184s0040 29.979 467 285 11 14 448 20 476 8.44e-50 176
MS.gene035689.t1 MTR_0078s0190 29.979 467 285 11 14 448 20 476 8.44e-50 176
MS.gene035689.t1 MTR_4g485630 30.658 486 284 13 9 454 3 475 3.58e-49 175
MS.gene035689.t1 MTR_3g079480 28.033 478 290 15 15 450 21 486 4.89e-49 175
MS.gene035689.t1 MTR_6g013450 29.019 479 291 14 15 452 10 480 6.63e-49 174
MS.gene035689.t1 MTR_7g080950 29.374 463 281 12 12 449 3 444 9.33e-49 173
MS.gene035689.t1 MTR_7g047030 29.764 467 285 13 15 448 6 462 1.31e-48 173
MS.gene035689.t1 MTR_7g047270 29.764 467 285 13 15 448 6 462 1.31e-48 173
MS.gene035689.t1 MTR_3g069710 26.915 457 300 8 16 454 13 453 1.75e-48 172
MS.gene035689.t1 MTR_5g464760 30.105 475 288 14 15 452 12 479 7.30e-48 171
MS.gene035689.t1 MTR_0078s0010 29.915 468 283 13 15 448 6 462 7.52e-48 171
MS.gene035689.t1 MTR_6g038230 28.541 473 284 16 11 453 7 455 1.28e-47 170
MS.gene035689.t1 MTR_6g014250 28.041 485 295 13 10 452 5 477 1.41e-47 171
MS.gene035689.t1 MTR_6g014040 27.941 476 300 12 15 452 10 480 1.78e-47 170
MS.gene035689.t1 MTR_0184s0030 29.310 464 284 12 14 443 5 458 2.60e-47 169
MS.gene035689.t1 MTR_6g013900 30.097 412 247 10 78 452 71 478 6.56e-47 169
MS.gene035689.t1 MTR_6g014187 29.400 483 283 17 15 452 10 479 9.72e-47 168
MS.gene035689.t1 MTR_6g014220 28.750 480 288 13 15 452 10 477 1.37e-46 168
MS.gene035689.t1 MTR_6g014170 29.218 486 285 15 1 452 1 461 1.79e-46 167
MS.gene035689.t1 MTR_6g038300 26.739 460 302 11 15 453 11 456 2.24e-46 167
MS.gene035689.t1 MTR_7g011470 28.817 465 295 12 15 452 10 465 3.31e-46 166
MS.gene035689.t1 MTR_6g014020 28.392 479 293 14 15 452 10 479 4.72e-46 166
MS.gene035689.t1 MTR_6g013960 27.766 479 296 14 15 452 10 479 5.80e-46 166
MS.gene035689.t1 MTR_8g009067 33.819 343 198 10 132 449 5 343 1.81e-45 162
MS.gene035689.t1 MTR_8g006260 28.782 476 281 13 15 448 6 465 1.89e-45 164
MS.gene035689.t1 MTR_6g033625 30.917 469 278 18 18 451 6 463 2.19e-45 164
MS.gene035689.t1 MTR_8g077590 27.766 461 299 12 15 448 9 462 4.40e-45 164
MS.gene035689.t1 MTR_8g009055 30.349 458 282 14 14 441 5 455 5.52e-45 163
MS.gene035689.t1 MTR_6g011340 31.026 390 240 9 89 452 93 479 5.60e-45 163
MS.gene035689.t1 MTR_7g011470 28.602 465 292 12 15 452 10 461 5.69e-45 163
MS.gene035689.t1 MTR_5g058320 28.238 471 289 13 15 452 10 464 6.20e-45 163
MS.gene035689.t1 MTR_1g107350 28.958 480 290 16 8 450 1 466 8.45e-45 163
MS.gene035689.t1 MTR_8g009067 33.333 354 207 10 121 449 112 461 9.14e-45 162
MS.gene035689.t1 MTR_6g013440 27.917 480 294 14 15 452 11 480 1.45e-44 162
MS.gene035689.t1 MTR_2g008210 27.542 472 302 12 15 452 11 476 1.68e-44 162
MS.gene035689.t1 MTR_6g014270 29.167 480 290 16 15 452 7 478 1.75e-44 162
MS.gene035689.t1 MTR_6g033725 38.276 290 153 9 179 448 174 457 2.01e-44 162
MS.gene035689.t1 MTR_4g095008 26.180 466 300 11 14 449 10 461 2.45e-44 163
MS.gene035689.t1 MTR_8g012650 29.019 479 274 17 15 446 6 465 2.51e-44 161
MS.gene035689.t1 MTR_6g033675 32.055 365 220 11 105 448 103 460 2.79e-44 161
MS.gene035689.t1 MTR_6g014310 28.247 485 286 15 15 452 11 480 4.07e-44 161
MS.gene035689.t1 MTR_6g038200 28.603 458 283 15 9 441 5 443 4.31e-44 160
MS.gene035689.t1 MTR_8g006270 27.813 471 288 16 15 449 6 460 4.37e-44 161
MS.gene035689.t1 MTR_7g080900 28.166 458 275 17 14 441 11 444 4.39e-44 160
MS.gene035689.t1 MTR_6g038220 28.821 458 277 13 11 441 7 442 5.92e-44 160
MS.gene035689.t1 MTR_8g059425 28.118 473 300 11 15 452 10 477 5.95e-44 160
MS.gene035689.t1 MTR_6g013920 29.612 412 249 10 78 452 71 478 5.99e-44 160
MS.gene035689.t1 MTR_0078s0060 29.274 468 287 14 14 448 5 461 6.72e-44 160
MS.gene035689.t1 MTR_8g088560 27.594 453 288 13 14 441 9 446 8.66e-44 160
MS.gene035689.t1 MTR_8g009073 31.503 346 206 9 121 440 112 452 2.08e-43 159
MS.gene035689.t1 MTR_1g107380 30.084 359 218 10 115 449 120 469 2.35e-43 159
MS.gene035689.t1 MTR_6g013990 29.197 411 251 11 78 452 71 477 2.90e-43 159
MS.gene035689.t1 MTR_8g012745 32.425 367 204 13 114 446 106 462 4.85e-43 158
MS.gene035689.t1 MTR_8g009073 38.222 225 117 5 245 448 108 331 5.95e-43 154
MS.gene035689.t1 MTR_8g012635 34.160 363 196 13 114 441 106 460 8.01e-43 157
MS.gene035689.t1 MTR_3g049970 26.778 478 295 13 14 452 8 469 1.21e-42 157
MS.gene035689.t1 MTR_6g014150 26.891 476 304 12 15 452 7 476 1.41e-42 157
MS.gene035689.t1 MTR_1g107375 28.035 453 284 11 14 441 7 442 2.75e-42 155
MS.gene035689.t1 MTR_8g009050 28.903 474 282 16 14 448 5 462 3.32e-42 155
MS.gene035689.t1 MTR_3g479470 28.274 481 284 16 15 450 13 477 3.58e-42 156
MS.gene035689.t1 MTR_8g009063 29.614 466 289 13 14 448 12 469 1.01e-41 154
MS.gene035689.t1 MTR_6g005600 34.069 317 171 9 163 448 154 463 1.06e-41 154
MS.gene035689.t1 MTR_7g102560 29.072 485 285 18 14 450 8 481 1.08e-41 154
MS.gene035689.t1 MTR_3g008010 26.964 471 304 12 15 450 10 475 1.30e-41 154
MS.gene035689.t1 MTR_8g008990 29.412 459 287 15 14 441 5 457 1.64e-41 154
MS.gene035689.t1 MTR_7g080935 27.586 464 295 13 12 454 8 451 1.64e-41 154
MS.gene035689.t1 MTR_6g014290 26.737 475 304 14 15 452 10 477 4.73e-41 153
MS.gene035689.t1 MTR_6g014050 28.184 479 294 13 15 452 11 480 7.06e-41 152
MS.gene035689.t1 MTR_7g117405 30.266 489 278 20 9 450 6 478 1.10e-40 152
MS.gene035689.t1 MTR_3g009510 28.822 399 232 12 93 450 87 474 1.12e-40 152
MS.gene035689.t1 MTR_4g064987 28.764 445 279 14 22 444 15 443 1.33e-40 151
MS.gene035689.t1 MTR_1g107360 25.431 464 311 11 14 452 8 461 1.85e-40 151
MS.gene035689.t1 MTR_7g080940 26.190 462 304 12 12 454 8 451 1.94e-40 150
MS.gene035689.t1 MTR_8g083280 27.455 448 296 11 15 439 7 448 1.97e-40 151
MS.gene035689.t1 MTR_6g033660 30.110 362 230 7 105 448 103 459 2.20e-40 151
MS.gene035689.t1 MTR_4g031800 29.615 493 269 16 14 454 8 474 2.66e-40 150
MS.gene035689.t1 MTR_8g465670 26.850 473 294 11 16 449 8 467 2.76e-40 150
MS.gene035689.t1 MTR_6g014200 28.000 475 300 12 15 452 7 476 3.72e-40 150
MS.gene035689.t1 MTR_1g019510 27.766 461 301 11 14 448 5 459 3.83e-40 150
MS.gene035689.t1 MTR_4g094220 25.833 480 300 14 15 449 7 475 4.81e-40 150
MS.gene035689.t1 MTR_6g023665 34.247 292 169 7 179 448 177 467 5.42e-40 150
MS.gene035689.t1 MTR_4g094920 26.767 467 296 13 14 449 25 476 7.39e-40 150
MS.gene035689.t1 MTR_3g479610 31.333 300 180 7 175 452 17 312 8.21e-40 145
MS.gene035689.t1 MTR_4g485620 29.348 460 277 13 29 450 3 452 1.01e-39 149
MS.gene035689.t1 MTR_4g064987 28.924 446 271 15 22 444 15 437 2.32e-39 147
MS.gene035689.t1 MTR_6g033615 31.081 370 220 12 102 451 95 449 2.55e-39 147
MS.gene035689.t1 MTR_3g084520 26.667 480 291 14 15 449 6 469 3.28e-39 147
MS.gene035689.t1 MTR_8g027885 26.681 461 299 11 16 448 19 468 4.64e-39 147
MS.gene035689.t1 MTR_1g107365 27.579 475 296 12 5 450 34 489 5.31e-39 147
MS.gene035689.t1 MTR_3g084530 26.025 488 290 14 15 452 6 472 6.17e-39 147
MS.gene035689.t1 MTR_1g062380 26.465 495 302 14 8 450 7 491 7.25e-39 147
MS.gene035689.t1 MTR_7g013220 26.522 460 298 15 15 450 5 448 1.11e-38 145
MS.gene035689.t1 MTR_7g070810 27.686 484 293 14 14 454 8 477 1.33e-38 146
MS.gene035689.t1 MTR_7g102450 30.913 482 270 17 12 450 8 469 2.32e-38 145
MS.gene035689.t1 MTR_6g014240 26.923 468 286 11 14 452 6 446 3.00e-38 144
MS.gene035689.t1 MTR_5g045970 27.033 492 302 15 8 450 7 490 3.80e-38 145
MS.gene035689.t1 MTR_6g488280 40.291 206 103 4 263 448 255 460 4.26e-38 144
MS.gene035689.t1 MTR_0428s0010 40.291 206 103 4 263 448 255 460 4.26e-38 144
MS.gene035689.t1 MTR_5g019580 28.178 472 285 15 14 441 6 467 5.58e-38 144
MS.gene035689.t1 MTR_1g107315 26.105 475 304 13 15 454 8 470 9.92e-38 144
MS.gene035689.t1 MTR_7g013180 26.247 461 285 14 15 445 5 440 1.02e-37 143
MS.gene035689.t1 MTR_8g064880 25.486 463 274 12 14 426 8 449 1.05e-37 144
MS.gene035689.t1 MTR_8g008970 30.704 355 213 9 121 448 112 460 1.38e-37 146
MS.gene035689.t1 MTR_8g008970 34.836 244 151 5 213 448 541 784 1.85e-35 140
MS.gene035689.t1 MTR_5g087620 27.961 515 265 21 15 451 10 496 1.47e-37 143
MS.gene035689.t1 MTR_8g006710 27.623 467 292 14 16 448 7 461 2.50e-37 142
MS.gene035689.t1 MTR_6g014300 27.484 473 301 15 9 452 6 465 4.83e-37 141
MS.gene035689.t1 MTR_1g029540 36.681 229 125 6 245 453 232 460 5.11e-37 141
MS.gene035689.t1 MTR_0891s0010 31.142 289 177 7 184 452 3 289 5.68e-37 137
MS.gene035689.t1 MTR_7g070610 27.328 494 288 18 11 452 9 483 5.76e-37 142
MS.gene035689.t1 MTR_7g013200 26.566 463 281 15 15 449 5 436 6.73e-37 140
MS.gene035689.t1 MTR_5g090580 27.456 397 241 12 95 452 86 474 8.57e-37 141
MS.gene035689.t1 MTR_7g102460 28.425 489 284 20 14 450 8 482 1.14e-36 141
MS.gene035689.t1 MTR_4g008630 36.842 228 125 6 245 453 236 463 1.88e-36 140
MS.gene035689.t1 MTR_5g031840 26.439 469 306 15 15 454 5 463 2.51e-36 139
MS.gene035689.t1 MTR_1g032490 26.271 472 301 11 14 450 9 468 2.75e-36 139
MS.gene035689.t1 MTR_8g006730 27.158 475 295 14 11 448 2 462 2.78e-36 139
MS.gene035689.t1 MTR_7g102550 30.310 419 243 14 73 450 73 483 3.09e-36 139
MS.gene035689.t1 MTR_1g019520 35.437 206 113 3 263 448 3 208 3.17e-36 133
MS.gene035689.t1 MTR_5g031860 25.941 478 304 16 12 454 9 471 3.27e-36 139
MS.gene035689.t1 MTR_8g007585 38.660 194 114 2 263 452 199 391 4.15e-36 137
MS.gene035689.t1 MTR_5g090660 27.913 412 254 13 78 452 67 472 4.57e-36 140
MS.gene035689.t1 MTR_8g012730 33.663 303 149 8 167 440 17 296 4.75e-36 135
MS.gene035689.t1 MTR_0536s0010 27.859 481 275 18 14 449 20 473 7.63e-36 138
MS.gene035689.t1 MTR_0477s0010 38.384 198 117 2 259 452 120 316 1.22e-35 134
MS.gene035689.t1 MTR_5g090700 25.845 414 262 12 78 452 69 476 1.30e-35 137
MS.gene035689.t1 MTR_3g084540 26.446 484 294 16 15 452 6 473 1.32e-35 137
MS.gene035689.t1 MTR_8g012630 38.614 202 101 3 263 441 203 404 1.33e-35 136
MS.gene035689.t1 MTR_7g046490 29.275 345 214 8 132 451 123 462 1.46e-35 137
MS.gene035689.t1 MTR_5g031830 25.840 476 302 16 15 454 12 472 2.14e-35 137
MS.gene035689.t1 MTR_8g006220 27.686 484 285 14 16 449 7 475 2.18e-35 137
MS.gene035689.t1 MTR_8g090095 33.740 246 139 5 230 453 237 480 2.49e-35 137
MS.gene035689.t1 MTR_8g027870 26.966 356 237 5 114 448 115 468 2.65e-35 137
MS.gene035689.t1 MTR_7g117170 26.170 470 296 13 16 448 16 471 3.72e-35 136
MS.gene035689.t1 MTR_0536s0020 27.557 479 261 20 26 449 29 476 4.06e-35 136
MS.gene035689.t1 MTR_7g102490 26.694 487 297 18 14 450 8 484 4.75e-35 136
MS.gene035689.t1 MTR_5g019580 34.545 275 139 8 206 441 219 491 1.33e-34 135
MS.gene035689.t1 MTR_6g014190 32.016 253 156 4 215 452 35 286 1.47e-34 130
MS.gene035689.t1 MTR_4g024020 29.147 422 237 17 77 450 78 485 1.57e-34 135
MS.gene035689.t1 MTR_7g070660 28.425 489 284 20 11 452 7 476 1.59e-34 135
MS.gene035689.t1 MTR_8g044140 27.093 454 266 15 47 454 16 450 2.48e-34 134
MS.gene035689.t1 MTR_8g466240 26.957 460 296 12 15 450 8 451 2.94e-34 134
MS.gene035689.t1 MTR_7g071040 26.358 497 293 18 9 452 11 487 4.54e-34 134
MS.gene035689.t1 MTR_8g064870 24.949 489 296 16 14 454 10 475 5.36e-34 133
MS.gene035689.t1 MTR_8g043470 28.792 389 225 11 78 449 21 374 8.49e-34 131
MS.gene035689.t1 MTR_6g035265 28.118 473 275 18 26 453 22 474 1.26e-33 132
MS.gene035689.t1 MTR_5g090620 24.066 482 313 15 16 454 6 477 1.31e-33 132
MS.gene035689.t1 MTR_2g098430 29.487 390 230 14 91 442 84 466 1.44e-33 132
MS.gene035689.t1 MTR_4g117960 27.801 482 278 19 19 449 15 477 1.60e-33 132
MS.gene035689.t1 MTR_7g070740 26.411 496 289 17 11 452 7 480 2.45e-33 131
MS.gene035689.t1 MTR_1g107285 25.052 479 305 11 8 450 1 461 2.51e-33 131
MS.gene035689.t1 MTR_4g117890 26.722 479 265 18 26 449 24 471 3.34e-33 131
MS.gene035689.t1 MTR_4g485640 36.226 265 138 7 221 454 404 668 3.43e-33 132
MS.gene035689.t1 MTR_4g117980 28.482 481 263 20 26 449 22 478 3.92e-33 131
MS.gene035689.t1 MTR_7g070860 26.078 487 279 17 14 452 6 459 4.34e-33 130
MS.gene035689.t1 MTR_5g090670 25.187 401 247 10 95 452 86 476 5.46e-33 130
MS.gene035689.t1 MTR_5g040030 29.223 373 222 12 118 454 123 489 6.42e-33 130
MS.gene035689.t1 MTR_0009s0240 26.667 465 305 15 11 450 3 456 7.31e-33 130
MS.gene035689.t1 MTR_7g013260 25.991 454 299 16 13 449 4 437 8.86e-33 129
MS.gene035689.t1 MTR_5g098930 27.644 416 248 17 78 452 64 467 1.31e-32 129
MS.gene035689.t1 MTR_4g117950 31.351 370 197 14 120 450 109 460 2.02e-32 129
MS.gene035689.t1 MTR_7g070940 33.858 254 142 8 222 452 219 469 2.09e-32 129
MS.gene035689.t1 MTR_6g035295 26.316 494 293 18 14 454 11 486 2.43e-32 129
MS.gene035689.t1 MTR_5g090630 25.728 412 256 13 78 452 67 465 2.74e-32 128
MS.gene035689.t1 MTR_2g035040 30.563 373 203 15 120 449 24 383 4.10e-32 126
MS.gene035689.t1 MTR_7g055710 26.253 499 283 17 11 449 7 480 4.76e-32 128
MS.gene035689.t1 MTR_7g070930 26.829 492 293 19 11 452 10 484 4.92e-32 128
MS.gene035689.t1 MTR_1g040310 26.535 505 300 17 1 454 1 485 8.08e-32 127
MS.gene035689.t1 MTR_4g485590 28.818 406 226 12 18 394 10 381 1.67e-31 125
MS.gene035689.t1 MTR_7g012120 38.605 215 107 5 260 449 266 480 1.82e-31 126
MS.gene035689.t1 MTR_5g016660 26.733 505 268 19 19 454 14 485 1.83e-31 126
MS.gene035689.t1 MTR_6g035185 33.218 289 150 9 202 450 195 480 2.27e-31 126
MS.gene035689.t1 MTR_7g013240 26.211 454 297 17 13 449 4 436 2.32e-31 125
MS.gene035689.t1 MTR_5g004940 32.143 196 113 2 260 449 193 374 4.65e-31 124
MS.gene035689.t1 MTR_7g070800 35.160 219 119 6 254 452 257 472 7.55e-31 124
MS.gene035689.t1 MTR_7g070780 25.049 511 277 20 11 452 7 480 1.61e-30 124
MS.gene035689.t1 MTR_5g016480 26.944 360 236 10 116 452 115 470 1.86e-30 123
MS.gene035689.t1 MTR_8g068330 36.872 179 103 4 261 429 263 441 3.76e-30 122
MS.gene035689.t1 MTR_5g045960 26.639 488 295 18 14 450 8 483 4.27e-30 122
MS.gene035689.t1 MTR_3g009490 35.870 184 95 3 290 450 3 186 4.73e-30 115
MS.gene035689.t1 MTR_4g108250 35.160 219 119 6 254 452 269 484 4.97e-30 122
MS.gene035689.t1 MTR_4g118000 27.178 482 266 19 19 449 16 463 5.83e-30 122
MS.gene035689.t1 MTR_5g029800 28.279 488 275 19 14 449 10 474 7.04e-30 121
MS.gene035689.t1 MTR_5g090600 25.253 396 266 11 78 452 67 453 1.15e-29 120
MS.gene035689.t1 MTR_7g102520 25.743 505 290 17 12 454 9 490 1.61e-29 121
MS.gene035689.t1 MTR_5g098960 35.897 234 129 8 176 395 168 394 3.85e-29 119
MS.gene035689.t1 MTR_2g034990 29.333 375 207 15 120 450 119 479 4.10e-29 119
MS.gene035689.t1 MTR_5g070040 29.530 298 181 10 178 452 175 466 4.13e-29 119
MS.gene035689.t1 MTR_2g059240 36.364 187 117 2 266 450 280 466 4.25e-29 119
MS.gene035689.t1 MTR_7g070910 35.616 219 118 5 254 452 266 481 4.63e-29 119
MS.gene035689.t1 MTR_5g070090 29.434 265 164 8 207 453 203 462 6.35e-29 119
MS.gene035689.t1 MTR_7g067330 33.191 235 136 7 230 454 207 430 1.22e-28 117
MS.gene035689.t1 MTR_8g032950 35.616 219 115 5 257 449 259 477 1.66e-28 117
MS.gene035689.t1 MTR_5g090610 25.122 410 256 10 78 452 67 460 2.94e-28 117
MS.gene035689.t1 MTR_5g039900 25.100 498 307 18 6 454 5 485 3.29e-28 117
MS.gene035689.t1 MTR_7g071050 26.566 463 255 17 11 436 9 423 4.37e-28 115
MS.gene035689.t1 MTR_8g068340 35.533 197 113 6 266 449 272 467 4.67e-28 116
MS.gene035689.t1 MTR_5g067170 37.963 216 109 6 260 450 262 477 5.01e-28 116
MS.gene035689.t1 MTR_2g046820 28.409 264 156 7 218 453 205 463 8.63e-28 115
MS.gene035689.t1 MTR_5g027210 30.909 275 135 7 212 433 206 478 2.64e-27 114
MS.gene035689.t1 MTR_2086s0010 35.503 169 103 2 289 452 4 171 3.06e-27 107
MS.gene035689.t1 MTR_1996s0010 35.503 169 103 2 289 452 4 171 3.06e-27 107
MS.gene035689.t1 MTR_8g068360 36.782 174 100 5 266 429 271 444 4.43e-27 113
MS.gene035689.t1 MTR_2g040530 24.873 394 250 13 92 453 86 465 4.84e-27 113
MS.gene035689.t1 MTR_8g074550 25.657 495 297 16 15 452 8 488 5.85e-27 113
MS.gene035689.t1 MTR_8g071070 25.684 475 311 16 11 452 3 468 9.91e-27 112
MS.gene035689.t1 MTR_7g067120 34.483 203 115 5 230 423 207 400 1.19e-26 112
MS.gene035689.t1 MTR_6g014160 29.674 337 168 15 78 377 53 357 1.51e-26 110
MS.gene035689.t1 MTR_2g035020 28.131 487 281 19 14 449 10 478 1.52e-26 112
MS.gene035689.t1 MTR_5g072860 22.151 465 312 14 15 449 18 462 2.20e-26 111
MS.gene035689.t1 MTR_7g470610 41.497 147 79 3 255 394 123 269 3.32e-26 108
MS.gene035689.t1 MTR_7g070583 41.497 147 79 3 255 394 123 269 3.32e-26 108
MS.gene035689.t1 MTR_6g014185 31.900 279 145 10 186 452 99 344 3.71e-26 109
MS.gene035689.t1 MTR_2g046750 27.969 261 161 7 218 453 208 466 3.90e-26 110
MS.gene035689.t1 MTR_4g123553 37.805 164 96 3 265 422 268 431 5.44e-26 110
MS.gene035689.t1 MTR_5g072830 21.915 470 320 12 9 454 4 450 6.89e-26 109
MS.gene035689.t1 MTR_7g039550 32.636 239 132 6 245 454 25 263 8.62e-26 106
MS.gene035689.t1 MTR_6g013680 26.812 414 207 13 78 452 18 374 1.10e-25 108
MS.gene035689.t1 MTR_8g009840 34.426 183 95 4 289 448 341 521 1.39e-25 109
MS.gene035689.t1 MTR_7g070870 26.752 471 287 18 14 454 18 460 1.91e-25 108
MS.gene035689.t1 MTR_3g031450 23.478 460 300 14 15 450 18 449 3.96e-25 107
MS.gene035689.t1 MTR_5g072810 21.459 466 330 11 9 454 6 455 4.60e-25 107
MS.gene035689.t1 MTR_5g072840 23.605 466 317 16 9 454 4 450 1.11e-24 106
MS.gene035689.t1 MTR_4g077960 28.125 288 169 7 200 450 149 435 1.57e-24 105
MS.gene035689.t1 MTR_1g090270 34.419 215 123 6 240 438 239 451 1.84e-24 105
MS.gene035689.t1 MTR_2g008226 37.173 191 107 4 245 422 250 440 1.96e-24 105
MS.gene035689.t1 MTR_2g046620 37.195 164 97 3 265 422 269 432 2.07e-24 105
MS.gene035689.t1 MTR_6g042310 29.091 275 151 8 191 421 159 433 8.12e-24 103
MS.gene035689.t1 MTR_3g031400 21.778 450 318 13 15 450 18 447 1.02e-23 103
MS.gene035689.t1 MTR_3g435310 32.812 192 122 4 265 450 227 417 1.96e-23 102
MS.gene035689.t1 MTR_2g008220 29.545 264 150 6 200 427 177 440 3.10e-23 102
MS.gene035689.t1 MTR_5g072820 22.105 475 313 15 9 454 4 450 7.69e-23 100
MS.gene035689.t1 MTR_2g008225 29.167 264 151 8 200 427 178 441 2.08e-22 99.8
MS.gene035689.t1 MTR_4g059370 35.450 189 106 4 266 438 190 378 4.11e-22 98.2
MS.gene035689.t1 MTR_4g079250 31.489 235 147 7 208 429 202 435 5.40e-22 98.6
MS.gene035689.t1 MTR_4g082820 28.417 278 164 9 202 450 190 461 5.59e-22 98.6
MS.gene035689.t1 MTR_6g014000 43.220 118 66 1 328 445 32 148 1.08e-21 97.8
MS.gene035689.t1 MTR_4g082810 27.778 324 197 13 90 385 82 396 1.24e-21 97.1
MS.gene035689.t1 MTR_5g066390 36.538 156 94 2 301 452 60 214 1.81e-21 92.8
MS.gene035689.t1 MTR_2g014900 24.471 425 289 12 12 415 4 417 6.07e-21 95.5
MS.gene035689.t1 MTR_4g079270 30.638 235 149 7 208 429 202 435 1.65e-20 94.0
MS.gene035689.t1 MTR_8g007565 31.308 214 126 6 231 423 223 436 2.76e-20 93.6
MS.gene035689.t1 MTR_8g007650 31.308 214 126 6 231 423 223 436 4.70e-20 92.8
MS.gene035689.t1 MTR_6g036650 31.937 191 123 5 266 450 279 468 4.80e-20 92.8
MS.gene035689.t1 MTR_1g107325 34.091 132 82 1 324 450 219 350 8.43e-20 90.9
MS.gene035689.t1 MTR_2g083480 26.056 426 278 17 14 415 7 419 8.77e-20 92.0
MS.gene035689.t1 MTR_6g078320 25.879 313 195 10 157 440 163 467 1.42e-19 91.3
MS.gene035689.t1 MTR_2g083430 25.866 433 270 16 14 415 7 419 1.44e-19 91.3
MS.gene035689.t1 MTR_0536s0030 36.478 159 85 4 312 454 195 353 1.85e-19 90.1
MS.gene035689.t1 MTR_5g066410 30.531 226 129 7 231 431 195 417 2.27e-19 90.5
MS.gene035689.t1 MTR_2g083420 25.624 441 277 18 8 428 1 410 4.06e-19 89.7
MS.gene035689.t1 MTR_1g090280 34.545 165 92 4 290 438 137 301 6.77e-19 87.4
MS.gene035689.t1 MTR_5g075440 22.151 465 322 18 12 452 7 455 1.84e-18 87.8
MS.gene035689.t1 MTR_7g080960 28.426 197 93 5 258 454 321 469 4.38e-18 87.0
MS.gene035689.t1 MTR_2g083380 26.512 430 283 16 8 415 18 436 6.68e-18 86.3
MS.gene035689.t1 MTR_2g083390 31.982 222 121 8 216 428 210 410 1.19e-17 85.1
MS.gene035689.t1 MTR_7g070760 37.405 131 63 2 264 394 90 201 1.61e-17 81.3
MS.gene035689.t1 MTR_7g070995 34.965 143 76 4 324 452 2 141 2.38e-17 79.3
MS.gene035689.t1 MTR_8g056740 30.769 195 121 5 215 396 110 303 3.68e-17 83.6
MS.gene035689.t1 MTR_5g072850 26.872 227 144 8 174 389 115 330 3.72e-17 83.6
MS.gene035689.t1 MTR_5g090690 25.086 291 166 8 95 362 44 305 5.15e-17 82.8
MS.gene035689.t1 MTR_2g083490 26.667 435 276 18 8 415 1 419 1.81e-15 78.6
MS.gene035689.t1 MTR_6g013890 25.191 262 125 8 172 417 33 239 4.64e-12 66.6
MS.gene035689.t1 MTR_5g090650 22.222 288 178 10 78 339 52 319 4.47e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035689.t1 AT5G17050 50.559 447 214 4 15 454 12 458 4.72e-160 460
MS.gene035689.t1 AT5G17030 44.196 448 240 6 15 454 12 457 9.01e-133 391
MS.gene035689.t1 AT1G30530 44.773 440 236 5 15 450 12 448 2.85e-132 389
MS.gene035689.t1 AT5G17040 44.144 444 233 7 15 452 5 439 1.44e-130 385
MS.gene035689.t1 AT5G17040 44.156 308 167 3 150 452 30 337 2.40e-87 270
MS.gene035689.t1 AT3G46680 29.581 453 289 12 15 452 9 446 1.43e-53 186
MS.gene035689.t1 AT5G59580 28.097 452 299 10 15 454 9 446 2.13e-53 186
MS.gene035689.t1 AT5G59590 27.354 446 304 9 15 449 10 446 1.29e-52 183
MS.gene035689.t1 AT1G22400 28.184 479 287 14 15 449 13 478 1.75e-52 184
MS.gene035689.t1 AT3G46700 28.444 450 292 13 15 450 9 442 4.68e-51 179
MS.gene035689.t1 AT3G46660 26.856 458 301 9 16 454 15 457 7.23e-50 176
MS.gene035689.t1 AT1G22360 28.000 475 298 12 15 452 10 477 5.03e-49 174
MS.gene035689.t1 AT1G22380 28.870 478 290 14 15 452 13 480 1.01e-48 174
MS.gene035689.t1 AT5G05880 27.862 463 305 10 8 454 1 450 2.93e-48 172
MS.gene035689.t1 AT2G31790 26.395 466 300 13 15 453 8 457 6.67e-48 171
MS.gene035689.t1 AT3G46670 27.854 438 296 9 15 441 9 437 9.82e-48 170
MS.gene035689.t1 AT1G22360 27.579 475 288 12 15 452 10 465 1.71e-46 167
MS.gene035689.t1 AT3G46720 28.027 446 295 10 15 450 9 438 6.44e-46 165
MS.gene035689.t1 AT3G11340 30.747 348 224 7 119 454 104 446 8.59e-46 165
MS.gene035689.t1 AT3G46650 27.356 435 283 8 15 440 10 420 9.24e-46 164
MS.gene035689.t1 AT3G46690 27.703 444 294 10 26 454 20 451 1.27e-45 164
MS.gene035689.t1 AT3G16520 30.508 354 218 10 117 450 112 457 1.83e-45 164
MS.gene035689.t1 AT2G43820 28.233 464 287 17 15 454 7 448 1.99e-45 164
MS.gene035689.t1 AT1G05675 27.350 468 287 13 15 451 6 451 2.26e-45 164
MS.gene035689.t1 AT2G36770 30.247 486 278 20 14 450 13 486 1.12e-44 163
MS.gene035689.t1 AT1G05680 27.174 460 278 13 15 441 6 441 2.96e-44 161
MS.gene035689.t1 AT1G78270 29.228 479 287 18 15 452 13 480 5.82e-44 161
MS.gene035689.t1 AT2G31750 27.111 450 291 14 15 441 8 443 1.01e-43 159
MS.gene035689.t1 AT2G31750 26.940 464 301 15 15 454 8 457 1.87e-43 159
MS.gene035689.t1 AT1G01420 28.692 474 283 14 6 441 2 458 1.95e-43 159
MS.gene035689.t1 AT1G01420 28.814 472 281 14 8 441 1 455 2.25e-43 159
MS.gene035689.t1 AT3G55700 30.159 378 243 11 92 454 81 452 5.35e-43 157
MS.gene035689.t1 AT4G01070 29.474 475 275 16 8 441 1 456 1.63e-42 157
MS.gene035689.t1 AT1G22370 27.673 477 292 16 15 452 13 475 1.69e-42 157
MS.gene035689.t1 AT2G36780 30.146 481 285 17 14 450 13 486 1.87e-42 157
MS.gene035689.t1 AT5G05870 26.981 467 308 11 8 453 1 455 2.61e-42 156
MS.gene035689.t1 AT2G15480 29.835 486 290 16 8 450 1 478 4.76e-42 155
MS.gene035689.t1 AT4G34131 28.776 490 283 16 14 454 9 481 5.22e-42 155
MS.gene035689.t1 AT2G23260 26.180 466 296 14 15 453 10 454 6.75e-42 154
MS.gene035689.t1 AT2G43840 27.234 470 281 16 15 451 7 448 7.46e-42 154
MS.gene035689.t1 AT3G53160 28.571 490 293 17 8 450 1 480 7.85e-42 155
MS.gene035689.t1 AT5G05860 27.571 457 294 12 11 448 5 443 7.99e-42 154
MS.gene035689.t1 AT3G16520 29.480 346 216 10 117 442 112 449 9.10e-42 154
MS.gene035689.t1 AT3G16520 30.149 335 206 10 117 431 112 438 1.02e-41 154
MS.gene035689.t1 AT2G36970 25.751 466 313 12 15 452 10 470 1.05e-41 155
MS.gene035689.t1 AT2G15490 29.106 481 292 13 12 450 2 475 1.50e-41 154
MS.gene035689.t1 AT2G23250 27.009 448 295 10 18 449 1 432 1.77e-41 153
MS.gene035689.t1 AT1G22340 26.875 480 298 14 15 452 13 481 6.50e-41 152
MS.gene035689.t1 AT2G15490 28.926 484 292 13 12 450 2 478 8.91e-41 152
MS.gene035689.t1 AT2G43840 27.021 470 282 16 15 451 7 448 1.04e-40 151
MS.gene035689.t1 AT2G15480 29.435 496 289 16 8 450 1 488 1.46e-40 152
MS.gene035689.t1 AT5G05890 27.426 474 297 16 8 454 1 454 4.60e-40 149
MS.gene035689.t1 AT5G38040 25.342 438 303 9 26 450 21 447 1.63e-39 148
MS.gene035689.t1 AT5G66690 29.039 458 280 14 15 439 7 452 1.85e-39 148
MS.gene035689.t1 AT5G05900 26.981 467 301 12 8 453 1 448 3.23e-39 147
MS.gene035689.t1 AT5G26310 28.105 459 283 13 15 439 7 452 4.31e-39 147
MS.gene035689.t1 AT2G26480 25.602 457 302 12 15 452 8 445 5.05e-39 147
MS.gene035689.t1 AT1G01390 28.211 475 289 11 8 445 1 460 5.30e-39 147
MS.gene035689.t1 AT1G01390 28.211 475 289 11 8 445 18 477 6.79e-39 147
MS.gene035689.t1 AT2G36800 28.400 500 290 19 6 452 3 487 2.11e-38 145
MS.gene035689.t1 AT2G28080 28.665 457 275 15 19 442 22 460 2.56e-38 145
MS.gene035689.t1 AT4G15550 26.638 458 297 16 15 441 13 462 2.59e-38 145
MS.gene035689.t1 AT2G36790 27.143 490 288 15 14 450 12 485 7.48e-38 144
MS.gene035689.t1 AT3G50740 30.361 471 270 17 15 442 7 462 1.09e-37 144
MS.gene035689.t1 AT1G07240 30.671 313 179 11 163 450 174 473 3.34e-37 142
MS.gene035689.t1 AT2G36750 28.513 491 283 18 14 452 9 483 5.40e-37 142
MS.gene035689.t1 AT2G36760 27.500 480 299 14 14 450 13 486 5.61e-37 142
MS.gene035689.t1 AT5G38010 24.838 463 304 11 15 452 10 453 5.12e-36 138
MS.gene035689.t1 AT3G55710 27.155 464 313 11 8 454 1 456 5.50e-36 139
MS.gene035689.t1 AT4G15490 25.745 470 314 12 8 449 1 463 1.01e-35 138
MS.gene035689.t1 AT4G15480 27.601 471 299 14 12 450 16 476 2.24e-35 137
MS.gene035689.t1 AT4G34135 27.178 482 302 11 14 454 10 483 2.68e-35 137
MS.gene035689.t1 AT2G29730 25.862 348 238 9 110 441 108 451 4.92e-35 136
MS.gene035689.t1 AT3G02100 25.527 474 294 16 15 454 13 461 1.76e-34 134
MS.gene035689.t1 AT4G36770 37.500 208 109 3 260 446 250 457 2.90e-34 134
MS.gene035689.t1 AT4G34138 33.462 260 146 8 218 453 223 479 6.02e-34 133
MS.gene035689.t1 AT4G14090 28.166 458 290 18 15 450 13 453 6.08e-34 132
MS.gene035689.t1 AT1G05560 25.536 466 296 16 15 450 5 449 6.18e-34 133
MS.gene035689.t1 AT1G24100 26.652 469 288 16 15 450 11 456 6.55e-34 132
MS.gene035689.t1 AT1G05560 25.536 466 296 16 15 450 55 499 1.01e-33 133
MS.gene035689.t1 AT1G07250 31.765 255 149 7 216 449 219 469 1.27e-33 132
MS.gene035689.t1 AT2G30140 25.902 471 306 15 6 454 4 453 1.29e-33 132
MS.gene035689.t1 AT2G30140 25.532 470 308 14 6 454 4 452 2.04e-33 131
MS.gene035689.t1 AT3G21560 25.259 483 290 14 15 450 12 470 2.23e-33 132
MS.gene035689.t1 AT2G29710 24.107 448 304 12 22 441 12 451 2.28e-33 131
MS.gene035689.t1 AT3G53150 26.800 500 294 14 14 452 21 509 6.11e-33 130
MS.gene035689.t1 AT1G07260 32.031 256 140 7 212 441 213 460 6.13e-33 130
MS.gene035689.t1 AT2G29740 30.196 255 152 6 208 441 214 463 1.69e-32 129
MS.gene035689.t1 AT2G29750 27.972 286 182 9 174 444 182 458 1.99e-32 129
MS.gene035689.t1 AT2G30150 25.439 456 308 14 15 453 13 453 2.83e-32 128
MS.gene035689.t1 AT4G15500 27.122 483 280 18 11 449 5 459 3.08e-32 128
MS.gene035689.t1 AT3G21760 25.304 411 233 10 95 453 93 481 3.50e-32 128
MS.gene035689.t1 AT1G05530 23.810 462 312 12 15 450 5 452 3.86e-32 127
MS.gene035689.t1 AT3G22250 35.217 230 131 8 231 448 233 456 5.02e-32 127
MS.gene035689.t1 AT1G22370 30.132 302 179 9 176 452 11 305 6.03e-32 124
MS.gene035689.t1 AT1G73880 26.556 482 301 18 7 454 6 468 8.09e-32 127
MS.gene035689.t1 AT2G16890 27.719 469 296 18 15 450 7 465 2.74e-31 125
MS.gene035689.t1 AT2G30150 25.221 452 306 14 19 453 1 437 9.77e-31 123
MS.gene035689.t1 AT3G21800 27.506 389 235 11 104 453 96 476 2.54e-30 123
MS.gene035689.t1 AT2G18570 28.462 390 233 15 87 441 77 455 7.96e-30 121
MS.gene035689.t1 AT2G18560 28.710 310 187 10 161 441 61 365 1.52e-29 119
MS.gene035689.t1 AT5G14860 25.523 478 303 14 15 450 7 473 6.87e-29 119
MS.gene035689.t1 AT3G21790 27.346 373 229 9 117 453 113 479 1.14e-28 118
MS.gene035689.t1 AT2G16890 28.571 420 258 17 15 402 7 416 2.02e-28 117
MS.gene035689.t1 AT2G22590 27.443 481 261 21 1 428 1 446 3.53e-28 116
MS.gene035689.t1 AT4G15260 32.258 217 115 5 264 452 142 354 3.84e-28 115
MS.gene035689.t1 AT1G10400 24.947 473 303 18 13 449 3 459 6.34e-28 115
MS.gene035689.t1 AT3G21750 31.019 216 120 4 264 452 255 468 2.31e-27 114
MS.gene035689.t1 AT5G65550 32.911 237 144 6 208 432 209 442 2.43e-27 114
MS.gene035689.t1 AT4G15280 24.286 420 244 12 84 452 77 473 2.89e-27 114
MS.gene035689.t1 AT4G15280 24.286 420 244 12 84 452 109 505 4.31e-27 114
MS.gene035689.t1 AT1G06000 33.846 260 138 7 218 449 177 430 1.42e-26 111
MS.gene035689.t1 AT5G49690 37.853 177 103 4 266 438 267 440 3.62e-26 110
MS.gene035689.t1 AT3G21780 30.126 239 133 5 242 453 238 469 4.24e-25 107
MS.gene035689.t1 AT5G12890 26.293 464 290 17 15 435 8 462 1.38e-24 106
MS.gene035689.t1 AT5G37950 26.351 296 190 8 91 369 53 337 3.81e-24 103
MS.gene035689.t1 AT5G37950 25.597 293 202 6 91 369 53 343 7.06e-24 102
MS.gene035689.t1 AT5G53990 26.279 430 272 15 21 429 13 418 1.19e-23 103
MS.gene035689.t1 AT1G64910 26.682 431 269 16 21 429 13 418 3.68e-23 102
MS.gene035689.t1 AT5G03490 25.217 460 302 16 15 450 19 460 1.54e-21 97.4
MS.gene035689.t1 AT5G54010 25.455 440 277 17 21 433 13 428 2.89e-21 96.3
MS.gene035689.t1 AT1G51210 37.857 140 83 2 259 397 264 400 9.13e-21 94.7
MS.gene035689.t1 AT3G29630 32.234 273 157 11 180 430 156 422 6.96e-20 92.0
MS.gene035689.t1 AT4G27570 30.962 239 150 8 205 430 189 425 1.40e-19 91.3
MS.gene035689.t1 AT2G22930 27.715 267 174 9 180 430 156 419 1.67e-19 90.9
MS.gene035689.t1 AT1G50580 35.047 214 122 8 230 430 211 420 2.16e-19 90.9
MS.gene035689.t1 AT4G27560 30.126 239 152 8 205 430 189 425 1.19e-18 88.6
MS.gene035689.t1 AT3G29630 35.593 177 102 5 266 430 220 396 1.90e-18 87.8
MS.gene035689.t1 AT4G09500 26.279 430 272 16 21 429 13 418 2.71e-17 84.3
MS.gene035689.t1 AT1G64920 24.714 437 276 16 21 430 13 423 9.41e-17 82.8
MS.gene035689.t1 AT4G09500 35.329 167 97 5 274 429 227 393 9.79e-16 79.3
MS.gene035689.t1 AT4G01070 26.243 362 218 13 8 336 1 346 7.03e-13 70.1
MS.gene035689.t1 AT5G54060 30.409 171 107 5 266 426 268 436 1.45e-12 69.7

Find 94 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAACAATGTTACACAAAA+TGG 0.094461 8.4:+5884393 MS.gene035689:CDS
TTCCATTTATTTGGTCCTTT+AGG 0.142761 8.4:+5884695 MS.gene035689:CDS
CACCAACTGATGAGTGTTTA+AGG 0.162555 8.4:-5884807 None:intergenic
TATTGAAGCAAATGAGTTTA+TGG 0.197225 8.4:-5884446 None:intergenic
TCCATTTATTTGGTCCTTTA+GGG 0.197862 8.4:+5884696 MS.gene035689:CDS
CTTATTACATGTGGCTGTTT+TGG 0.204921 8.4:+5882148 MS.gene035689:CDS
CCTTGAGTTTCACAATCTTT+TGG 0.254936 8.4:-5885050 None:intergenic
CCCCTAAAGGACCAAATAAA+TGG 0.265046 8.4:-5884697 None:intergenic
AATGTGGATTTCCATTTATT+TGG 0.269480 8.4:+5884686 MS.gene035689:CDS
ATGCCAAATGGGTTCCTCTT+TGG 0.313159 8.4:+5882525 MS.gene035689:CDS
CCAGAAGGTTATGTACCTTC+TGG 0.325190 8.4:+5882347 MS.gene035689:CDS
TTCAAAGCTGTTGAACAAAA+TGG 0.331388 8.4:+5885081 MS.gene035689:CDS
AATACTTATAGAAAGTGTTT+TGG 0.331772 8.4:+5884930 MS.gene035689:CDS
ACACTATAATGCTTTATGTT+TGG 0.364265 8.4:-5882311 None:intergenic
AAAAGTATCGATGTTCTTCC+TGG 0.366322 8.4:+5884307 MS.gene035689:CDS
TGGGTTCCTCTTTGGACTGC+AGG 0.370371 8.4:+5882533 MS.gene035689:CDS
TGGAAATCCACATTCCTCTA+AGG 0.370941 8.4:-5884677 None:intergenic
CCTAGAAAATAAAGTATCAT+TGG 0.371448 8.4:-5882273 None:intergenic
GAAGAATGAAAATGTAACTT+TGG 0.379053 8.4:-5882237 None:intergenic
TTTAACTCATTCTCAATAAG+AGG 0.387960 8.4:-5884472 None:intergenic
GCAACAATGTTACACAAAAT+GGG 0.395935 8.4:+5884394 MS.gene035689:CDS
TTAACAATGTGTACCTTCCT+TGG 0.405770 8.4:-5882612 None:intergenic
CCAGAAGGTACATAACCTTC+TGG 0.409059 8.4:-5882347 None:intergenic
CAGAAGGTTATGTACCTTCT+GGG 0.421159 8.4:+5882348 MS.gene035689:CDS
TCAGTGGTGTATATAAGCTT+TGG 0.422010 8.4:+5884607 MS.gene035689:CDS
AAGAATGAAAATGTAACTTT+GGG 0.422986 8.4:-5882236 None:intergenic
GATGAAGCTGTGGCAGAGAC+AGG 0.424404 8.4:+5882434 MS.gene035689:CDS
TGCATTGGCAGAGTCCTTAG+AGG 0.431105 8.4:+5884663 MS.gene035689:CDS
CTAAGGAAATGCATGCCAAA+TGG 0.440729 8.4:+5882513 MS.gene035689:CDS
CCCTCCTTTCTCACTTGACA+TGG 0.441918 8.4:-5885019 None:intergenic
ATTTAGTAGCAATTTGAACT+TGG 0.447933 8.4:-5884497 None:intergenic
TTCCTCAGGATCACCCCTAA+AGG 0.463691 8.4:-5884710 None:intergenic
TAAGGAAATGCATGCCAAAT+GGG 0.481182 8.4:+5882514 MS.gene035689:CDS
GAGCAGCATGTGAGCCAAAT+GGG 0.481696 8.4:-5882175 None:intergenic
GCCTTTAGCTCGGGAAAACC+AGG 0.481777 8.4:-5884325 None:intergenic
TGAGTTTATGGCAACTGCAT+TGG 0.482638 8.4:-5884434 None:intergenic
TTGTGTAACATTGTTGCAAA+TGG 0.485442 8.4:-5884388 None:intergenic
TGGCATGCATTTCCTTAGCT+AGG 0.488282 8.4:-5882508 None:intergenic
GGAGCAGCATGTGAGCCAAA+TGG 0.492066 8.4:-5882176 None:intergenic
TTCAAATTGCTACTAAATGT+TGG 0.493383 8.4:+5884502 MS.gene035689:CDS
AGTCCAAAGAGGAACCCATT+TGG 0.494298 8.4:-5882528 None:intergenic
AAAAGGTAAAATTGTTGCAT+GGG 0.495249 8.4:+5884768 MS.gene035689:CDS
GGGTTCCTCTTTGGACTGCA+GGG 0.506293 8.4:+5882534 MS.gene035689:CDS
AAATAAAGTATCATTGGTTG+TGG 0.506801 8.4:-5882267 None:intergenic
ACCTCATGAGCTCACTGCAT+TGG 0.506888 8.4:+5884648 MS.gene035689:CDS
CTTGACAACACCACAGCGTA+AGG 0.511923 8.4:+5884534 MS.gene035689:CDS
CAAAAGGTAAAATTGTTGCA+TGG 0.512626 8.4:+5884767 MS.gene035689:CDS
AAGCATTATAGTGTTCATGA+TGG 0.513692 8.4:+5882320 MS.gene035689:CDS
TCTGTGTTGGAATGCATTGT+CGG 0.519338 8.4:+5884856 MS.gene035689:CDS
TTAACCATGTCAAGTGAGAA+AGG 0.519534 8.4:+5885015 MS.gene035689:CDS
TGCTAAGCACCCGTGTTCAT+CGG 0.526621 8.4:-5884560 None:intergenic
ATGCTTAAAGTTCTCTTGCA+TGG 0.530855 8.4:-5882405 None:intergenic
AAATCAGAAGCCTTTAGCTC+GGG 0.531108 8.4:-5884334 None:intergenic
GTCCTTTAGGGGTGATCCTG+AGG 0.536130 8.4:+5884708 MS.gene035689:CDS
ATGCAGTGAGCTCATGAGGT+GGG 0.537832 8.4:-5884645 None:intergenic
CCATTTATTTGGTCCTTTAG+GGG 0.543071 8.4:+5884697 MS.gene035689:CDS
ATTGGTGTGGGTGTTGACAA+TGG 0.545588 8.4:+5884955 MS.gene035689:CDS
GTTTGGTGCGGACCTAGCTA+AGG 0.546640 8.4:+5882496 MS.gene035689:CDS
TTCTGGGTGGAATTCTGTGT+TGG 0.547328 8.4:+5884843 MS.gene035689:CDS
CAAATCAGAAGCCTTTAGCT+CGG 0.556483 8.4:-5884335 None:intergenic
CCATGTCAAGTGAGAAAGGA+GGG 0.563799 8.4:+5885019 MS.gene035689:CDS
GCCAATGCAGTGAGCTCATG+AGG 0.564169 8.4:-5884649 None:intergenic
ATCCTTAAACACTCATCAGT+TGG 0.566039 8.4:+5884805 MS.gene035689:CDS
ACAAAATGGTACCTCTGCAA+TGG 0.571024 8.4:+5885095 MS.gene035689:CDS
TGCAGTGAGCTCATGAGGTG+GGG 0.571241 8.4:-5884644 None:intergenic
CAGAGAAAAGACTGGCTCCA+AGG 0.573763 8.4:+5882595 MS.gene035689:CDS
TGTGGTGTTGTCAAGTTGAA+TGG 0.574430 8.4:-5884526 None:intergenic
AAGGCTTCTGATTTGCCTGA+GGG 0.579054 8.4:+5884343 MS.gene035689:CDS
GTATATAAGCTTTGGAAGTG+TGG 0.580031 8.4:+5884615 MS.gene035689:CDS
GATCTTATCAGAGAAAAGAC+TGG 0.581356 8.4:+5882587 MS.gene035689:CDS
ATGGCAACTGCATTGGCTCG+TGG 0.586348 8.4:-5884427 None:intergenic
GAAAAGACTGGCTCCAAGGA+AGG 0.586393 8.4:+5882599 MS.gene035689:CDS
GCAGAGTCCTTAGAGGAATG+TGG 0.588171 8.4:+5884670 MS.gene035689:CDS
CGTAAGGTTTCCGATGAACA+CGG 0.589774 8.4:+5884550 MS.gene035689:CDS
ATGAACACGGGTGCTTAGCA+TGG 0.590839 8.4:+5884563 MS.gene035689:CDS
CCAAAAGATTGTGAAACTCA+AGG 0.593571 8.4:+5885050 MS.gene035689:CDS
TGTTTAAGGATTTCAACTTG+AGG 0.610755 8.4:-5884793 None:intergenic
AAAGGCTTCTGATTTGCCTG+AGG 0.612284 8.4:+5884342 MS.gene035689:CDS
GTTCATGATGGATTGCCAGA+AGG 0.614560 8.4:+5882332 MS.gene035689:CDS
CCACTGAAGAATTCTCATGT+TGG 0.621777 8.4:-5884591 None:intergenic
ATGAAGCTGTGGCAGAGACA+GGG 0.623701 8.4:+5882435 MS.gene035689:CDS
GCAGTGAGCTCATGAGGTGG+GGG 0.627099 8.4:-5884643 None:intergenic
TGAGGCCCTGCAGTCCAAAG+AGG 0.631764 8.4:-5882539 None:intergenic
AATGCAGTGAGCTCATGAGG+TGG 0.632823 8.4:-5884646 None:intergenic
GGTTCACGTGGATTCCCAGA+AGG 0.638759 8.4:-5882362 None:intergenic
ACCATGTCAAGTGAGAAAGG+AGG 0.644406 8.4:+5885018 MS.gene035689:CDS
GTAAGGTTTCCGATGAACAC+GGG 0.650703 8.4:+5884551 MS.gene035689:CDS
AGTAGTGAAATCCATTGCAG+AGG 0.654416 8.4:-5885106 None:intergenic
GCATGTTATTGATGAAGCTG+TGG 0.657226 8.4:+5882424 MS.gene035689:CDS
TGGTAACAACTTATTACATG+TGG 0.676074 8.4:+5882139 MS.gene035689:CDS
ACATGTGTAAGAAGAGAGTG+AGG 0.678080 8.4:-5882557 None:intergenic
GTGTTGGAATGCATTGTCGG+TGG 0.680590 8.4:+5884859 MS.gene035689:CDS
CCAACATGAGAATTCTTCAG+TGG 0.690370 8.4:+5884591 MS.gene035689:CDS
TCATCGGAAACCTTACGCTG+TGG 0.690406 8.4:-5884544 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAAATTAGACATATA+TGG + chr8.4:5882702-5882721 MS.gene035689:intron 10.0%
!! ATAAAAATGTATAAATAAAG+GGG + chr8.4:5883181-5883200 MS.gene035689:intron 10.0%
!! CATTAAATAATTTATGTATT+TGG - chr8.4:5884078-5884097 None:intergenic 10.0%
!!! ATTTTGTTAATTAAAGTTAT+TGG + chr8.4:5882656-5882675 MS.gene035689:intron 10.0%
!! AAAATTGTGTCAATTAAATT+GGG - chr8.4:5883144-5883163 None:intergenic 15.0%
!! AATTGTATTGAAAATTGAAA+TGG + chr8.4:5883277-5883296 MS.gene035689:intron 15.0%
!! ACTAAAAGAAAAGATAAATT+AGG - chr8.4:5882767-5882786 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr8.4:5883245-5883264 MS.gene035689:intron 15.0%
!! TAATTTACTGTACAAATTAA+TGG + chr8.4:5884148-5884167 MS.gene035689:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr8.4:5883244-5883263 MS.gene035689:intron 15.0%
!! TTCAATTTATACTAAAAGAA+TGG - chr8.4:5882802-5882821 None:intergenic 15.0%
!!! ACTACTTTTATCTTTTAATA+AGG - chr8.4:5883861-5883880 None:intergenic 15.0%
!!! ATAATTTATGTATTTGGTTT+AGG - chr8.4:5884072-5884091 None:intergenic 15.0%
!!! CTACTTTTATCTTTTAATAA+GGG - chr8.4:5883860-5883879 None:intergenic 15.0%
!!! GACATTTTTTTTTAGAAAAT+GGG + chr8.4:5883314-5883333 MS.gene035689:intron 15.0%
!!! TTTTTAATATTAAAAGAGTG+CGG - chr8.4:5883533-5883552 None:intergenic 15.0%
!! AAAGTGGAATATATTGTATT+GGG + chr8.4:5883204-5883223 MS.gene035689:intron 20.0%
!! AAGAATGAAAATGTAACTTT+GGG - chr8.4:5882239-5882258 None:intergenic 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG - chr8.4:5883145-5883164 None:intergenic 20.0%
!! GAGTTTAAAAGAAAAAGAAT+TGG + chr8.4:5882901-5882920 MS.gene035689:intron 20.0%
!!! AATACTTATAGAAAGTGTTT+TGG + chr8.4:5884930-5884949 MS.gene035689:CDS 20.0%
!!! GGACATTTTTTTTTAGAAAA+TGG + chr8.4:5883313-5883332 MS.gene035689:intron 20.0%
!!! GGAGTAACTTTTTATTAAAA+GGG + chr8.4:5883357-5883376 MS.gene035689:intron 20.0%
!!! GTAAATTGTTTCTTGTAAAT+AGG + chr8.4:5884108-5884127 MS.gene035689:intron 20.0%
!!! TACAATTTTATGTGACTATT+TGG - chr8.4:5882830-5882849 None:intergenic 20.0%
!!! TTTTAATATTAAAAGAGTGC+GGG - chr8.4:5883532-5883551 None:intergenic 20.0%
! AAAAAAGGTCTACTAATCAT+TGG - chr8.4:5884889-5884908 None:intergenic 25.0%
! AAAAGGTAAAATTGTTGCAT+GGG + chr8.4:5884768-5884787 MS.gene035689:CDS 25.0%
! AATGTGGATTTCCATTTATT+TGG + chr8.4:5884686-5884705 MS.gene035689:CDS 25.0%
! ACACTATAATGCTTTATGTT+TGG - chr8.4:5882314-5882333 None:intergenic 25.0%
! AGCTTCAAAAATGAAATGAA+TGG + chr8.4:5882119-5882138 MS.gene035689:CDS 25.0%
! AGGAAGAAAAAATTACTTCA+CGG - chr8.4:5882747-5882766 None:intergenic 25.0%
! AGTGAAAAAAATTGCTATAG+AGG + chr8.4:5882211-5882230 MS.gene035689:CDS 25.0%
! ATATATGGAATTCCAAACTT+GGG + chr8.4:5882717-5882736 MS.gene035689:intron 25.0%
! ATTTAGTAGCAATTTGAACT+TGG - chr8.4:5884500-5884519 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + chr8.4:5883203-5883222 MS.gene035689:intron 25.0%
! GAAGAATGAAAATGTAACTT+TGG - chr8.4:5882240-5882259 None:intergenic 25.0%
! GAATTGGAAACAATAATAGA+AGG + chr8.4:5882917-5882936 MS.gene035689:intron 25.0%
! GTCTTAATGAAGAGAAAAAT+TGG - chr8.4:5882386-5882405 None:intergenic 25.0%
! TAAAAGTTATTTAACCAGCT+AGG + chr8.4:5884222-5884241 MS.gene035689:intron 25.0%
! TAAATTATAATTACTCCCTC+CGG - chr8.4:5884135-5884154 None:intergenic 25.0%
! TATTGAAGCAAATGAGTTTA+TGG - chr8.4:5884449-5884468 None:intergenic 25.0%
! TTCAAATTGCTACTAAATGT+TGG + chr8.4:5884502-5884521 MS.gene035689:CDS 25.0%
! TTTAACTCATTCTCAATAAG+AGG - chr8.4:5884475-5884494 None:intergenic 25.0%
!! AAATAAAGTATCATTGGTTG+TGG - chr8.4:5882270-5882289 None:intergenic 25.0%
!! AGTTATTGATAGTTGATTAG+TGG + chr8.4:5883573-5883592 MS.gene035689:intron 25.0%
!! CCTAGAAAATAAAGTATCAT+TGG - chr8.4:5882276-5882295 None:intergenic 25.0%
!! GATTTCAAATTTTCAACCAT+TGG + chr8.4:5883005-5883024 MS.gene035689:intron 25.0%
!! GGGAGTAACTTTTTATTAAA+AGG + chr8.4:5883356-5883375 MS.gene035689:intron 25.0%
!! GTTATTGATAGTTGATTAGT+GGG + chr8.4:5883574-5883593 MS.gene035689:intron 25.0%
!!! ATGATTAGTAGACCTTTTTT+CGG + chr8.4:5884889-5884908 MS.gene035689:CDS 25.0%
!!! ATTTTAGTACTATCATCACT+AGG + chr8.4:5882879-5882898 MS.gene035689:intron 25.0%
!!! CCAATGATACTTTATTTTCT+AGG + chr8.4:5882273-5882292 MS.gene035689:CDS 25.0%
!!! CTATAGCAATTTTTTTCACT+AGG - chr8.4:5882211-5882230 None:intergenic 25.0%
!!! TGATTACTGATGCATTTTTT+TGG + chr8.4:5882474-5882493 MS.gene035689:CDS 25.0%
AAGCATTATAGTGTTCATGA+TGG + chr8.4:5882320-5882339 MS.gene035689:CDS 30.0%
ATTAAAAGGGAAATGCTAAC+TGG + chr8.4:5883370-5883389 MS.gene035689:intron 30.0%
ATTCCTTAACAATTGTCCTA+AGG + chr8.4:5883942-5883961 MS.gene035689:intron 30.0%
CAAAAGGTAAAATTGTTGCA+TGG + chr8.4:5884767-5884786 MS.gene035689:CDS 30.0%
CATATATGGAATTCCAAACT+TGG + chr8.4:5882716-5882735 MS.gene035689:intron 30.0%
CCATTTAAGAACCCAAAAAT+GGG + chr8.4:5883699-5883718 MS.gene035689:intron 30.0%
GCAACAATGTTACACAAAAT+GGG + chr8.4:5884394-5884413 MS.gene035689:CDS 30.0%
GTCAACTTTCTCTTGTAAAT+AGG - chr8.4:5884009-5884028 None:intergenic 30.0%
TATGCTAACCAAAACACTTA+GGG - chr8.4:5883836-5883855 None:intergenic 30.0%
TCCATTTATTTGGTCCTTTA+GGG + chr8.4:5884696-5884715 MS.gene035689:CDS 30.0%
TGCAACAATGTTACACAAAA+TGG + chr8.4:5884393-5884412 MS.gene035689:CDS 30.0%
TGGTAACAACTTATTACATG+TGG + chr8.4:5882139-5882158 MS.gene035689:CDS 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr8.4:5883188-5883207 MS.gene035689:intron 30.0%
TGTTTAAGGATTTCAACTTG+AGG - chr8.4:5884796-5884815 None:intergenic 30.0%
TTATGCTAACCAAAACACTT+AGG - chr8.4:5883837-5883856 None:intergenic 30.0%
TTCAAAGCTGTTGAACAAAA+TGG + chr8.4:5885081-5885100 MS.gene035689:CDS 30.0%
TTCCATTTATTTGGTCCTTT+AGG + chr8.4:5884695-5884714 MS.gene035689:CDS 30.0%
TTCCTTAACAATTGTCCTAA+GGG + chr8.4:5883943-5883962 MS.gene035689:intron 30.0%
TTGAAGATTAATTACCTAGC+TGG - chr8.4:5884239-5884258 None:intergenic 30.0%
TTGGAAAGGACAAAAACAAA+AGG + chr8.4:5884751-5884770 MS.gene035689:CDS 30.0%
TTGTGTAACATTGTTGCAAA+TGG - chr8.4:5884391-5884410 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG - chr8.4:5883140-5883159 None:intergenic 30.0%
! AAAATTGCCAAAAGGGTTTT+TGG + chr8.4:5884732-5884751 MS.gene035689:CDS 30.0%
! ATATCTTTTATTACTCCCTC+AGG - chr8.4:5884361-5884380 None:intergenic 30.0%
! TGGTTGAAAATTTGAAATCG+TGG - chr8.4:5883004-5883023 None:intergenic 30.0%
! TTGAAATGGCTCAGTTATTT+TGG + chr8.4:5883291-5883310 MS.gene035689:intron 30.0%
! TTGTTTCTTGTAAATAGGAC+CGG + chr8.4:5884113-5884132 MS.gene035689:intron 30.0%
!! TGAAATGGCTCAGTTATTTT+GGG + chr8.4:5883292-5883311 MS.gene035689:intron 30.0%
!!! ACTGATGCATTTTTTTGGTT+TGG + chr8.4:5882479-5882498 MS.gene035689:CDS 30.0%
!!! ATAGAAAGTGTTTTGGAGAT+TGG + chr8.4:5884937-5884956 MS.gene035689:CDS 30.0%
!!! CAATTTTTTTCACTAGGCTA+AGG - chr8.4:5882205-5882224 None:intergenic 30.0%
!!! CCATTTTTGGGTTCTTAAAT+GGG - chr8.4:5883701-5883720 None:intergenic 30.0%
AAGAACTTTGTGTGAGATCT+GGG + chr8.4:5883605-5883624 MS.gene035689:intron 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr8.4:5883327-5883346 MS.gene035689:intron 35.0%
ATCCGGTGCAAATAAAACAA+AGG + chr8.4:5883072-5883091 MS.gene035689:intron 35.0%
ATCCTTAAACACTCATCAGT+TGG + chr8.4:5884805-5884824 MS.gene035689:CDS 35.0%
ATGCTTAAAGTTCTCTTGCA+TGG - chr8.4:5882408-5882427 None:intergenic 35.0%
CCAAAAGATTGTGAAACTCA+AGG + chr8.4:5885050-5885069 MS.gene035689:CDS 35.0%
CCATTTATTTGGTCCTTTAG+GGG + chr8.4:5884697-5884716 MS.gene035689:CDS 35.0%
CCCATTTAAGAACCCAAAAA+TGG + chr8.4:5883698-5883717 MS.gene035689:intron 35.0%
CCTTAAAATAATACTCCCTC+CGG + chr8.4:5883982-5884001 MS.gene035689:intron 35.0%
CTGAGGAAAAATTGCCAAAA+GGG + chr8.4:5884725-5884744 MS.gene035689:CDS 35.0%
CTTTCTCTTGTAAATAGGAC+CGG - chr8.4:5884004-5884023 None:intergenic 35.0%
GATCTTATCAGAGAAAAGAC+TGG + chr8.4:5882587-5882606 MS.gene035689:CDS 35.0%
GTGCATTAATCACAAACTTC+AGG + chr8.4:5882978-5882997 MS.gene035689:intron 35.0%
TAAGAACTTTGTGTGAGATC+TGG + chr8.4:5883604-5883623 MS.gene035689:intron 35.0%
TAAGGAAATGCATGCCAAAT+GGG + chr8.4:5882514-5882533 MS.gene035689:CDS 35.0%
TACCTATTAGGTACTCTAGT+GGG + chr8.4:5883441-5883460 MS.gene035689:intron 35.0%
TCAGTGGTGTATATAAGCTT+TGG + chr8.4:5884607-5884626 MS.gene035689:CDS 35.0%
TCCGGTGCAAATAAAACAAA+GGG + chr8.4:5883073-5883092 MS.gene035689:intron 35.0%
TTAACAATGTGTACCTTCCT+TGG - chr8.4:5882615-5882634 None:intergenic 35.0%
TTAACCATGTCAAGTGAGAA+AGG + chr8.4:5885015-5885034 MS.gene035689:CDS 35.0%
! AACTAATGCCCTAAGTGTTT+TGG + chr8.4:5883825-5883844 MS.gene035689:intron 35.0%
! AAGAGAAAAATTGGTTCACG+TGG - chr8.4:5882377-5882396 None:intergenic 35.0%
! CAAATAAAACAAAGGGTGTG+CGG + chr8.4:5883080-5883099 MS.gene035689:intron 35.0%
! CATCGATACTTTTGACATCA+TGG - chr8.4:5884300-5884319 None:intergenic 35.0%
! CCTTGAGTTTCACAATCTTT+TGG - chr8.4:5885053-5885072 None:intergenic 35.0%
! CTTATTACATGTGGCTGTTT+TGG + chr8.4:5882148-5882167 MS.gene035689:CDS 35.0%
! TAGAGTACCTAATAGGTACA+GGG - chr8.4:5883439-5883458 None:intergenic 35.0%
! TTTAAGACCCTGTACCTATT+AGG + chr8.4:5883429-5883448 MS.gene035689:intron 35.0%
!! AAAAGTATCGATGTTCTTCC+TGG + chr8.4:5884307-5884326 MS.gene035689:CDS 35.0%
!! GTATATAAGCTTTGGAAGTG+TGG + chr8.4:5884615-5884634 MS.gene035689:CDS 35.0%
!!! ACCCTTTGTTTTATTTGCAC+CGG - chr8.4:5883077-5883096 None:intergenic 35.0%
!!! CCCATTTTTGGGTTCTTAAA+TGG - chr8.4:5883702-5883721 None:intergenic 35.0%
!!! CGGAGGGAGTATTATTTTAA+GGG - chr8.4:5883984-5884003 None:intergenic 35.0%
!!! TGCATTTTTTTGGTTTGGTG+CGG + chr8.4:5882484-5882503 MS.gene035689:CDS 35.0%
AACCCTTGATCTCCGAAAAA+AGG - chr8.4:5884904-5884923 None:intergenic 40.0%
ACAAAATGGTACCTCTGCAA+TGG + chr8.4:5885095-5885114 MS.gene035689:CDS 40.0%
ACATGTGTAAGAAGAGAGTG+AGG - chr8.4:5882560-5882579 None:intergenic 40.0%
AGTAGTGAAATCCATTGCAG+AGG - chr8.4:5885109-5885128 None:intergenic 40.0%
CAAATCAGAAGCCTTTAGCT+CGG - chr8.4:5884338-5884357 None:intergenic 40.0%
CACCAACTGATGAGTGTTTA+AGG - chr8.4:5884810-5884829 None:intergenic 40.0%
CAGAAGGTTATGTACCTTCT+GGG + chr8.4:5882348-5882367 MS.gene035689:CDS 40.0%
CCAACATGAGAATTCTTCAG+TGG + chr8.4:5884591-5884610 MS.gene035689:CDS 40.0%
CCACTGAAGAATTCTCATGT+TGG - chr8.4:5884594-5884613 None:intergenic 40.0%
CCCCTAAAGGACCAAATAAA+TGG - chr8.4:5884700-5884719 None:intergenic 40.0%
CCTGAGGAAAAATTGCCAAA+AGG + chr8.4:5884724-5884743 MS.gene035689:CDS 40.0%
CTAAGGAAATGCATGCCAAA+TGG + chr8.4:5882513-5882532 MS.gene035689:CDS 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr8.4:5883328-5883347 MS.gene035689:intron 40.0%
GCATGTTATTGATGAAGCTG+TGG + chr8.4:5882424-5882443 MS.gene035689:CDS 40.0%
GGAGTGATTGAGTGCTTATT+AGG + chr8.4:5883630-5883649 MS.gene035689:intron 40.0%
GTACCTATTAGGTACTCTAG+TGG + chr8.4:5883440-5883459 MS.gene035689:intron 40.0%
TAACGTGCCTATGTGACATT+TGG - chr8.4:5883036-5883055 None:intergenic 40.0%
TAAGAACCCAAAAATGGGTG+TGG + chr8.4:5883704-5883723 MS.gene035689:intron 40.0%
TCTGTGTTGGAATGCATTGT+CGG + chr8.4:5884856-5884875 MS.gene035689:CDS 40.0%
TGAGTTTATGGCAACTGCAT+TGG - chr8.4:5884437-5884456 None:intergenic 40.0%
TGCCCTTAGGACAATTGTTA+AGG - chr8.4:5883948-5883967 None:intergenic 40.0%
TGGAAATCCACATTCCTCTA+AGG - chr8.4:5884680-5884699 None:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG - chr8.4:5883137-5883156 None:intergenic 40.0%
TGTCTTAGACCATCTCCATT+GGG + chr8.4:5883393-5883412 MS.gene035689:intron 40.0%
TTCTTGTAAATAGGACCGGA+GGG + chr8.4:5884117-5884136 MS.gene035689:intron 40.0%
TTTCTTGTAAATAGGACCGG+AGG + chr8.4:5884116-5884135 MS.gene035689:intron 40.0%
! AAATCAGAAGCCTTTAGCTC+GGG - chr8.4:5884337-5884356 None:intergenic 40.0%
! AGTGGGAAGAATCTTTTCCA+GGG + chr8.4:5883458-5883477 MS.gene035689:intron 40.0%
! CCTTTTGGCAATTTTTCCTC+AGG - chr8.4:5884727-5884746 None:intergenic 40.0%
! CTAGAGTACCTAATAGGTAC+AGG - chr8.4:5883440-5883459 None:intergenic 40.0%
! GTCCTTTCCAAAAACCCTTT+TGG - chr8.4:5884742-5884761 None:intergenic 40.0%
! TAGTGGGAAGAATCTTTTCC+AGG + chr8.4:5883457-5883476 MS.gene035689:intron 40.0%
! TTCCCACTAGAGTACCTAAT+AGG - chr8.4:5883446-5883465 None:intergenic 40.0%
! TTTTTCACTAGGCTAAGGAG+TGG - chr8.4:5882200-5882219 None:intergenic 40.0%
!! GTGTGTTTTTGACGCATTCT+GGG + chr8.4:5884827-5884846 MS.gene035689:CDS 40.0%
!! TAAGACCCTCACTTTTAAGC+AGG + chr8.4:5883505-5883524 MS.gene035689:intron 40.0%
!! TCCAGGGTTTTATAAGACCT+GGG + chr8.4:5883474-5883493 MS.gene035689:intron 40.0%
!! TGCCAAAAGGGTTTTTGGAA+AGG + chr8.4:5884737-5884756 MS.gene035689:CDS 40.0%
!! TGTGGTGTTGTCAAGTTGAA+TGG - chr8.4:5884529-5884548 None:intergenic 40.0%
!! TTCCAGGGTTTTATAAGACC+TGG + chr8.4:5883473-5883492 MS.gene035689:intron 40.0%
!!! AAGTGTTTTGGAGATTGGTG+TGG + chr8.4:5884942-5884961 MS.gene035689:CDS 40.0%
!!! AGACCTTTTTTCGGAGATCA+AGG + chr8.4:5884898-5884917 MS.gene035689:CDS 40.0%
!!! AGTGTTTTGGAGATTGGTGT+GGG + chr8.4:5884943-5884962 MS.gene035689:CDS 40.0%
!!! CCGGAGGGAGTATTATTTTA+AGG - chr8.4:5883985-5884004 None:intergenic 40.0%
!!! GACCTTTTTTCGGAGATCAA+GGG + chr8.4:5884899-5884918 MS.gene035689:CDS 40.0%
AATAGTTCAGACCCTCCCAA+TGG - chr8.4:5883411-5883430 None:intergenic 45.0%
ACCATGTCAAGTGAGAAAGG+AGG + chr8.4:5885018-5885037 MS.gene035689:CDS 45.0%
ACTTTGTGTGAGATCTGGGT+TGG + chr8.4:5883609-5883628 MS.gene035689:intron 45.0%
AGTCCAAAGAGGAACCCATT+TGG - chr8.4:5882531-5882550 None:intergenic 45.0%
CCAGAAGGTTATGTACCTTC+TGG + chr8.4:5882347-5882366 MS.gene035689:CDS 45.0%
CCATGTCAAGTGAGAAAGGA+GGG + chr8.4:5885019-5885038 MS.gene035689:CDS 45.0%
CGTAAGGTTTCCGATGAACA+CGG + chr8.4:5884550-5884569 MS.gene035689:CDS 45.0%
CTCTTGTAAATAGGACCGGA+GGG - chr8.4:5884000-5884019 None:intergenic 45.0%
GGTACTGCCAAATGTCACAT+AGG + chr8.4:5883026-5883045 MS.gene035689:intron 45.0%
GTAAGGTTTCCGATGAACAC+GGG + chr8.4:5884551-5884570 MS.gene035689:CDS 45.0%
GTGACATTTGGCAGTACCAA+TGG - chr8.4:5883024-5883043 None:intergenic 45.0%
GTGTCTTAGACCATCTCCAT+TGG + chr8.4:5883392-5883411 MS.gene035689:intron 45.0%
TCTCTTGTAAATAGGACCGG+AGG - chr8.4:5884001-5884020 None:intergenic 45.0%
TGGCATGCATTTCCTTAGCT+AGG - chr8.4:5882511-5882530 None:intergenic 45.0%
TTAGACCATCTCCATTGGGA+GGG + chr8.4:5883397-5883416 MS.gene035689:intron 45.0%
TTCTGGGTGGAATTCTGTGT+TGG + chr8.4:5884843-5884862 MS.gene035689:CDS 45.0%
! AAAGGCTTCTGATTTGCCTG+AGG + chr8.4:5884342-5884361 MS.gene035689:CDS 45.0%
! AACAATTGTCCTAAGGGCAC+TGG + chr8.4:5883949-5883968 MS.gene035689:intron 45.0%
! AAGGCTTCTGATTTGCCTGA+GGG + chr8.4:5884343-5884362 MS.gene035689:CDS 45.0%
! ATGCCAAATGGGTTCCTCTT+TGG + chr8.4:5882525-5882544 MS.gene035689:CDS 45.0%
! CCAGAAGGTACATAACCTTC+TGG - chr8.4:5882350-5882369 None:intergenic 45.0%
! TTTTGCTAACCAGTGCCCTT+AGG - chr8.4:5883961-5883980 None:intergenic 45.0%
!! AGAGCATCCACACCCATTTT+TGG - chr8.4:5883714-5883733 None:intergenic 45.0%
!! ATTGGTGTGGGTGTTGACAA+TGG + chr8.4:5884955-5884974 MS.gene035689:CDS 45.0%
!! CCAGGGTTTTATAAGACCTG+GGG + chr8.4:5883475-5883494 MS.gene035689:intron 45.0%
!! GAGCATCCACACCCATTTTT+GGG - chr8.4:5883713-5883732 None:intergenic 45.0%
!! GGTGTGTTTTTGACGCATTC+TGG + chr8.4:5884826-5884845 MS.gene035689:CDS 45.0%
!! GTTCATGATGGATTGCCAGA+AGG + chr8.4:5882332-5882351 MS.gene035689:CDS 45.0%
!! TGTTTTTGACGCATTCTGGG+TGG + chr8.4:5884830-5884849 MS.gene035689:CDS 45.0%
!!! GCTGTTTTGGCATTCCCATT+TGG + chr8.4:5882161-5882180 MS.gene035689:CDS 45.0%
!! AATAAAAATGTATAAATAAA+GGG + chr8.4:5883180-5883199 MS.gene035689:intron 5.0%
!! TAATAAAAATGTATAAATAA+AGG + chr8.4:5883179-5883198 MS.gene035689:intron 5.0%
AAAAGTTACTCCCTCCGTCC+CGG - chr8.4:5883349-5883368 None:intergenic 50.0%
AATGCAGTGAGCTCATGAGG+TGG - chr8.4:5884649-5884668 None:intergenic 50.0%
ACCTCATGAGCTCACTGCAT+TGG + chr8.4:5884648-5884667 MS.gene035689:CDS 50.0%
AGGGTCTTAAGTAAGACCCC+AGG - chr8.4:5883494-5883513 None:intergenic 50.0%
AGTCCGGTAGTCTTTGGATC+CGG + chr8.4:5883055-5883074 MS.gene035689:intron 50.0%
ATGAACACGGGTGCTTAGCA+TGG + chr8.4:5884563-5884582 MS.gene035689:CDS 50.0%
ATGAAGCTGTGGCAGAGACA+GGG + chr8.4:5882435-5882454 MS.gene035689:CDS 50.0%
ATGCAGTGAGCTCATGAGGT+GGG - chr8.4:5884648-5884667 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr8.4:5883332-5883351 MS.gene035689:intron 50.0%
CACGTTAGTCCGGTAGTCTT+TGG + chr8.4:5883049-5883068 MS.gene035689:intron 50.0%
CCCTCCTTTCTCACTTGACA+TGG - chr8.4:5885022-5885041 None:intergenic 50.0%
CGGGTCCTGCTTAAAAGTGA+GGG - chr8.4:5883513-5883532 None:intergenic 50.0%
CTTAGACCATCTCCATTGGG+AGG + chr8.4:5883396-5883415 MS.gene035689:intron 50.0%
CTTCACGGTACACCCAAGTT+TGG - chr8.4:5882732-5882751 None:intergenic 50.0%
CTTGACAACACCACAGCGTA+AGG + chr8.4:5884534-5884553 MS.gene035689:CDS 50.0%
GAGCAGCATGTGAGCCAAAT+GGG - chr8.4:5882178-5882197 None:intergenic 50.0%
GCAGAGTCCTTAGAGGAATG+TGG + chr8.4:5884670-5884689 MS.gene035689:CDS 50.0%
GTCACATAGGCACGTTAGTC+CGG + chr8.4:5883039-5883058 MS.gene035689:intron 50.0%
GTGTTGGAATGCATTGTCGG+TGG + chr8.4:5884859-5884878 MS.gene035689:CDS 50.0%
TCATCGGAAACCTTACGCTG+TGG - chr8.4:5884547-5884566 None:intergenic 50.0%
TGCTAAGCACCCGTGTTCAT+CGG - chr8.4:5884563-5884582 None:intergenic 50.0%
TTCCTCAGGATCACCCCTAA+AGG - chr8.4:5884713-5884732 None:intergenic 50.0%
! CAGAGAAAAGACTGGCTCCA+AGG + chr8.4:5882595-5882614 MS.gene035689:CDS 50.0%
! CCCCAGGTCTTATAAAACCC+TGG - chr8.4:5883478-5883497 None:intergenic 50.0%
! GAAAAGACTGGCTCCAAGGA+AGG + chr8.4:5882599-5882618 MS.gene035689:CDS 50.0%
! TGCATTGGCAGAGTCCTTAG+AGG + chr8.4:5884663-5884682 MS.gene035689:CDS 50.0%
!! TCCTGGTTTTCCCGAGCTAA+AGG + chr8.4:5884324-5884343 MS.gene035689:CDS 50.0%
GATGAAGCTGTGGCAGAGAC+AGG + chr8.4:5882434-5882453 MS.gene035689:CDS 55.0%
GCACCGGATCCAAAGACTAC+CGG - chr8.4:5883061-5883080 None:intergenic 55.0%
GCCAATGCAGTGAGCTCATG+AGG - chr8.4:5884652-5884671 None:intergenic 55.0%
GCGGGTCCTGCTTAAAAGTG+AGG - chr8.4:5883514-5883533 None:intergenic 55.0%
GGAGCAGCATGTGAGCCAAA+TGG - chr8.4:5882179-5882198 None:intergenic 55.0%
GGGTGTGGATGCTCTTCTCA+GGG + chr8.4:5883719-5883738 MS.gene035689:intron 55.0%
GGGTTCCTCTTTGGACTGCA+GGG + chr8.4:5882534-5882553 MS.gene035689:CDS 55.0%
GGTTCACGTGGATTCCCAGA+AGG - chr8.4:5882365-5882384 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr8.4:5883336-5883355 MS.gene035689:intron 55.0%
TCAGACCCTCCCAATGGAGA+TGG - chr8.4:5883405-5883424 None:intergenic 55.0%
TGCAGTGAGCTCATGAGGTG+GGG - chr8.4:5884647-5884666 None:intergenic 55.0%
TGGGTGTGGATGCTCTTCTC+AGG + chr8.4:5883718-5883737 MS.gene035689:intron 55.0%
TGGGTTCCTCTTTGGACTGC+AGG + chr8.4:5882533-5882552 MS.gene035689:CDS 55.0%
! GCCTTTAGCTCGGGAAAACC+AGG - chr8.4:5884328-5884347 None:intergenic 55.0%
! GTCCTTTAGGGGTGATCCTG+AGG + chr8.4:5884708-5884727 MS.gene035689:CDS 55.0%
!! ATGGCAACTGCATTGGCTCG+TGG - chr8.4:5884430-5884449 None:intergenic 55.0%
!! GTTTGGTGCGGACCTAGCTA+AGG + chr8.4:5882496-5882515 MS.gene035689:CDS 55.0%
GCAGTGAGCTCATGAGGTGG+GGG - chr8.4:5884646-5884665 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG + chr8.4:5883335-5883354 MS.gene035689:intron 60.0%
TGAGGCCCTGCAGTCCAAAG+AGG - chr8.4:5882542-5882561 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 5882113 5885152 5882113 ID=MS.gene035689
chr8.4 mRNA 5882113 5885152 5882113 ID=MS.gene035689.t1;Parent=MS.gene035689
chr8.4 exon 5882113 5882620 5882113 ID=MS.gene035689.t1.exon1;Parent=MS.gene035689.t1
chr8.4 CDS 5882113 5882620 5882113 ID=cds.MS.gene035689.t1;Parent=MS.gene035689.t1
chr8.4 exon 5884296 5885152 5884296 ID=MS.gene035689.t1.exon2;Parent=MS.gene035689.t1
chr8.4 CDS 5884296 5885152 5884296 ID=cds.MS.gene035689.t1;Parent=MS.gene035689.t1
Gene Sequence

>MS.gene035689

ATGTCTAGCTTCAAAAATGAAATGAATGGTAACAACTTATTACATGTGGCTGTTTTGGCATTCCCATTTGGCTCACATGCTGCTCCACTCCTTAGCCTAGTGAAAAAAATTGCTATAGAGGCTCCCAAAGTTACATTTTCATTCTTCTGCACAACCACAACCAATGATACTTTATTTTCTAGGTCAAATGAGTTTCTTCCAAACATAAAGCATTATAGTGTTCATGATGGATTGCCAGAAGGTTATGTACCTTCTGGGAATCCACGTGAACCAATTTTTCTCTTCATTAAGACCATGCAAGAGAACTTTAAGCATGTTATTGATGAAGCTGTGGCAGAGACAGGGAAGAACATTACTTGTTTGATTACTGATGCATTTTTTTGGTTTGGTGCGGACCTAGCTAAGGAAATGCATGCCAAATGGGTTCCTCTTTGGACTGCAGGGCCTCACTCTCTTCTTACACATGTTTACACAGATCTTATCAGAGAAAAGACTGGCTCCAAGGAAGGTACACATTGTTAATTTGAACAACAAATCTTCTTGATTTTGTTAATTAAAGTTATTGGTATTTAAAATCATACAAATAAAAAAATTAAAATTAGACATATATGGAATTCCAAACTTGGGTGTACCGTGAAGTAATTTTTTCTTCCTAATTTATCTTTTCTTTTAGTATAAAAAACTTTCCATTCTTTTAGTATAAATTGAACTTTTCCAAATAGTCACATAAAATTGTAAAACTTTCACTATTTTTGACAAATTAGCGATTTTAGTACTATCATCACTAGGAGTTTAAAAGAAAAAGAATTGGAAACAATAATAGAAGGACATGACACGAGAAAAGTACTACGTAACTAATCATGTTGTGCATTAATCACAAACTTCAGGCCACGATTTCAAATTTTCAACCATTGGTACTGCCAAATGTCACATAGGCACGTTAGTCCGGTAGTCTTTGGATCCGGTGCAAATAAAACAAAGGGTGTGCGGTTCGCATACACGTTCATCAAAACAAGAACTACCTCCGTCCCAATTTAATTGACACAATTTTGTTTTTCACACATATTAATAAAAATGTATAAATAAAGGGGAAAGTGGAATATATTGTATTGGGAATGATAAAAGTAATATTATTTAGTGTTATATTGTATTGGGAATGATGAAAATTGTATTGAAAATTGAAATGGCTCAGTTATTTTGGGACATTTTTTTTTAGAAAATGGGTCAGTTATTCCGGGACGGAGGGAGTAACTTTTTATTAAAAGGGAAATGCTAACTGGTGTCTTAGACCATCTCCATTGGGAGGGTCTGAACTATTTAAGACCCTGTACCTATTAGGTACTCTAGTGGGAAGAATCTTTTCCAGGGTTTTATAAGACCTGGGGTCTTACTTAAGACCCTCACTTTTAAGCAGGACCCGCACTCTTTTAATATTAAAAAAATTGAATATAATGATATAAAGTTATTGATAGTTGATTAGTGGGTCTCATTTAAGAACTTTGTGTGAGATCTGGGTTGGAGTGATTGAGTGCTTATTAGGTACTACTATTAAAAAATTATAAATGAGTGATGTGTACATGTGAGACCCATTTAAGAACCCAAAAATGGGTGTGGATGCTCTTCTCAGGGCATTAATTAAGTGAGTAGATTTGATTTTTTAAAAATTAAAAAATTGTTGAATTCAATACAAACTTATTATTTTTAATTTTCTTAACTAATGCCCTAAGTGTTTTGGTTAGCATAACCCTTATTAAAAGATAAAAGTAGTGTAATTATTACTTAATCAAAAATCAAAACTTATATTTTCAAGACAAATTTTCTATTTATAGATTCCTTAACAATTGTCCTAAGGGCACTGGTTAGCAAAACCCTTAAAATAATACTCCCTCCGGTCCTATTTACAAGAGAAAGTTGACTTTTTAGATACATTGAATAATGTAAGTATATAGTCAAGAACCTAAACCAAATACATAAATTATTTAATGTATCTAAAAAGTAAATTGTTTCTTGTAAATAGGACCGGAGGGAGTAATTATAATTTACTGTACAAATTAATGGAGTGTGTACTAATGCATGAACTTCAATGTTCTTTTTTGCTATGTATAGAGCTAAAAGTTATTTAACCAGCTAGGTAATTAATCTTCAATTTATAAGAATTTGATTTGATTGTTCTTGTTTTGTAGTCCATGATGTCAAAAGTATCGATGTTCTTCCTGGTTTTCCCGAGCTAAAGGCTTCTGATTTGCCTGAGGGAGTAATAAAAGATATAGATGTACCATTTGCAACAATGTTACACAAAATGGGACTAGAGTTACCACGAGCCAATGCAGTTGCCATAAACTCATTTGCTTCAATACATCCTCTTATTGAGAATGAGTTAAATTCCAAGTTCAAATTGCTACTAAATGTTGGTCCATTCAACTTGACAACACCACAGCGTAAGGTTTCCGATGAACACGGGTGCTTAGCATGGTTGAACCAACATGAGAATTCTTCAGTGGTGTATATAAGCTTTGGAAGTGTGGTAACACCCCCACCTCATGAGCTCACTGCATTGGCAGAGTCCTTAGAGGAATGTGGATTTCCATTTATTTGGTCCTTTAGGGGTGATCCTGAGGAAAAATTGCCAAAAGGGTTTTTGGAAAGGACAAAAACAAAAGGTAAAATTGTTGCATGGGCTCCTCAAGTTGAAATCCTTAAACACTCATCAGTTGGTGTGTTTTTGACGCATTCTGGGTGGAATTCTGTGTTGGAATGCATTGTCGGTGGTGTGCCAATGATTAGTAGACCTTTTTTCGGAGATCAAGGGTTGAATACAATACTTATAGAAAGTGTTTTGGAGATTGGTGTGGGTGTTGACAATGGAGTTTTGACTAAAGAATCTACTAAGAAAGCTTTCGAATTAACCATGTCAAGTGAGAAAGGAGGGATAATGCGCCAAAAGATTGTGAAACTCAAGGAGTCAGCATTCAAAGCTGTTGAACAAAATGGTACCTCTGCAATGGATTTCACTACTTTGATACAAATTGTCACTAGTTGA
Protein sequence

>MS.gene035689.t1

MSSFKNEMNGNNLLHVAVLAFPFGSHAAPLLSLVKKIAIEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKHYSVHDGLPEGYVPSGNPREPIFLFIKTMQENFKHVIDEAVAETGKNITCLITDAFFWFGADLAKEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFASIHPLIENELNSKFKLLLNVGPFNLTTPQRKVSDEHGCLAWLNQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPEEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILIESVLEIGVGVDNGVLTKESTKKAFELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS