Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029573.t1 | CAA61334.1 | 99.4 | 320 | 2 | 0 | 5 | 324 | 67 | 386 | 2.10E-176 | 628.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029573.t1 | P42753 | 57.0 | 272 | 97 | 5 | 17 | 277 | 63 | 325 | 3.6e-73 | 276.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029573.t1 | Q40338 | 99.4 | 320 | 2 | 0 | 5 | 324 | 67 | 386 | 1.5e-176 | 628.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene029573 | MS.gene013042 | PPI |
MS.gene029573 | MS.gene48441 | PPI |
MS.gene029573 | MS.gene44271 | PPI |
MS.gene029573 | MS.gene020406 | PPI |
MS.gene029573 | MS.gene86240 | PPI |
MS.gene029573 | MS.gene027748 | PPI |
MS.gene29142 | MS.gene029573 | PPI |
MS.gene029573 | MS.gene78707 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029573.t1 | MTR_1g107535 | 96.262 | 321 | 11 | 1 | 5 | 324 | 64 | 384 | 0.0 | 638 |
MS.gene029573.t1 | MTR_4g094942 | 53.918 | 319 | 136 | 5 | 5 | 318 | 43 | 355 | 8.24e-114 | 334 |
MS.gene029573.t1 | MTR_3g102310 | 57.516 | 306 | 115 | 8 | 5 | 303 | 47 | 344 | 3.29e-111 | 327 |
MS.gene029573.t1 | MTR_5g032550 | 36.604 | 265 | 153 | 3 | 48 | 308 | 92 | 345 | 1.11e-47 | 164 |
MS.gene029573.t1 | MTR_4g080990 | 33.460 | 263 | 162 | 7 | 14 | 271 | 59 | 313 | 1.36e-45 | 158 |
MS.gene029573.t1 | MTR_3g100710 | 35.433 | 254 | 152 | 5 | 34 | 280 | 82 | 330 | 1.37e-42 | 150 |
MS.gene029573.t1 | MTR_5g032550 | 42.690 | 171 | 98 | 0 | 48 | 218 | 92 | 262 | 7.33e-42 | 146 |
MS.gene029573.t1 | MTR_5g035360 | 38.839 | 224 | 126 | 2 | 36 | 250 | 56 | 277 | 1.33e-39 | 142 |
MS.gene029573.t1 | MTR_8g063120 | 38.208 | 212 | 129 | 1 | 45 | 256 | 91 | 300 | 7.72e-39 | 140 |
MS.gene029573.t1 | MTR_8g063120 | 40.462 | 173 | 94 | 1 | 34 | 197 | 71 | 243 | 6.63e-36 | 131 |
MS.gene029573.t1 | MTR_5g065830 | 31.890 | 254 | 164 | 3 | 46 | 294 | 86 | 335 | 8.49e-34 | 127 |
MS.gene029573.t1 | MTR_8g068950 | 33.047 | 233 | 136 | 6 | 48 | 270 | 108 | 330 | 9.86e-30 | 117 |
MS.gene029573.t1 | MTR_5g015670 | 33.663 | 202 | 123 | 5 | 44 | 242 | 99 | 292 | 1.53e-29 | 115 |
MS.gene029573.t1 | MTR_3g103080 | 40.523 | 153 | 87 | 2 | 12 | 164 | 34 | 182 | 4.77e-29 | 114 |
MS.gene029573.t1 | MTR_3g100710 | 33.333 | 201 | 123 | 4 | 86 | 280 | 106 | 301 | 3.43e-25 | 103 |
MS.gene029573.t1 | MTR_2g011500 | 32.484 | 157 | 100 | 2 | 50 | 206 | 86 | 236 | 2.12e-22 | 95.5 |
MS.gene029573.t1 | MTR_2g089490 | 30.159 | 252 | 147 | 9 | 63 | 299 | 64 | 301 | 2.95e-22 | 95.1 |
MS.gene029573.t1 | MTR_2g089490 | 30.120 | 249 | 148 | 8 | 63 | 299 | 64 | 298 | 6.22e-22 | 94.4 |
MS.gene029573.t1 | MTR_4g095790 | 30.151 | 199 | 135 | 4 | 11 | 206 | 31 | 228 | 3.30e-14 | 72.4 |
MS.gene029573.t1 | MTR_3g102530 | 32.484 | 157 | 95 | 6 | 52 | 204 | 124 | 273 | 7.20e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029573.t1 | AT4G34160 | 60.996 | 241 | 85 | 2 | 5 | 245 | 51 | 282 | 1.23e-98 | 296 |
MS.gene029573.t1 | AT5G67260 | 48.726 | 314 | 142 | 6 | 13 | 320 | 65 | 365 | 1.37e-92 | 280 |
MS.gene029573.t1 | AT5G67260 | 49.673 | 306 | 135 | 6 | 13 | 312 | 65 | 357 | 2.89e-90 | 275 |
MS.gene029573.t1 | AT3G50070 | 45.538 | 325 | 163 | 5 | 1 | 321 | 45 | 359 | 4.93e-88 | 268 |
MS.gene029573.t1 | AT2G22490 | 35.931 | 231 | 135 | 3 | 48 | 270 | 97 | 322 | 5.99e-44 | 154 |
MS.gene029573.t1 | AT2G22490 | 35.776 | 232 | 135 | 4 | 48 | 270 | 97 | 323 | 3.16e-42 | 150 |
MS.gene029573.t1 | AT1G70210 | 38.424 | 203 | 125 | 0 | 48 | 250 | 82 | 284 | 5.57e-41 | 146 |
MS.gene029573.t1 | AT5G65420 | 48.718 | 117 | 60 | 0 | 48 | 164 | 78 | 194 | 1.68e-35 | 130 |
MS.gene029573.t1 | AT5G65420 | 49.138 | 116 | 59 | 0 | 48 | 163 | 78 | 193 | 1.91e-35 | 129 |
MS.gene029573.t1 | AT5G65420 | 49.138 | 116 | 59 | 0 | 48 | 163 | 78 | 193 | 4.03e-35 | 130 |
MS.gene029573.t1 | AT5G65420 | 45.238 | 126 | 59 | 1 | 48 | 163 | 78 | 203 | 5.99e-33 | 124 |
MS.gene029573.t1 | AT5G10440 | 35.577 | 208 | 132 | 2 | 1 | 206 | 21 | 228 | 1.44e-30 | 117 |
MS.gene029573.t1 | AT5G10440 | 39.024 | 164 | 99 | 1 | 1 | 163 | 21 | 184 | 3.82e-30 | 114 |
MS.gene029573.t1 | AT4G03270 | 31.164 | 292 | 173 | 10 | 8 | 287 | 15 | 290 | 1.72e-24 | 101 |
MS.gene029573.t1 | AT4G03270 | 31.164 | 292 | 172 | 11 | 8 | 287 | 15 | 289 | 8.00e-23 | 96.7 |
MS.gene029573.t1 | AT4G37630 | 36.806 | 144 | 82 | 3 | 29 | 164 | 45 | 187 | 1.50e-21 | 92.4 |
MS.gene029573.t1 | AT4G37630 | 36.986 | 146 | 81 | 4 | 29 | 164 | 45 | 189 | 5.25e-21 | 90.9 |
MS.gene029573.t1 | AT4G37630 | 36.986 | 146 | 81 | 4 | 29 | 164 | 45 | 189 | 1.36e-20 | 90.9 |
MS.gene029573.t1 | AT5G02110 | 25.180 | 278 | 186 | 8 | 44 | 315 | 74 | 335 | 1.12e-19 | 88.6 |
MS.gene029573.t1 | AT5G02110 | 25.541 | 231 | 150 | 8 | 91 | 315 | 92 | 306 | 5.39e-15 | 74.7 |
Find 41 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTAAAGTCAATGCTCATTA+TGG | 0.232843 | 1.3:-73655528 | MS.gene029573:CDS |
ATCTTCATTGGGAGTTTCTT+AGG | 0.261503 | 1.3:-73655115 | MS.gene029573:CDS |
TGAATTTGTCACCGATTAAC+AGG | 0.270558 | 1.3:-73654285 | MS.gene029573:CDS |
GATTGAAAACTAATCTTCAT+TGG | 0.293518 | 1.3:-73655127 | MS.gene029573:CDS |
CTTACAAATGCAAATAATTA+TGG | 0.328803 | 1.3:-73654466 | MS.gene029573:CDS |
TTGCTGTTAACTATCTTGAT+AGG | 0.355913 | 1.3:-73655482 | MS.gene029573:CDS |
TTTATAGATTCAAGATTTGT+TGG | 0.378968 | 1.3:-73654886 | MS.gene029573:intron |
TTCTTGTTGAGTTATCTCTT+TGG | 0.382076 | 1.3:+73655629 | None:intergenic |
TGATTCTGTCAACACTGAAA+TGG | 0.427443 | 1.3:-73655205 | MS.gene029573:CDS |
TTCTTGGTCTTCTTAAACAC+AGG | 0.430266 | 1.3:+73654322 | None:intergenic |
ATTGAAAACTAATCTTCATT+GGG | 0.430502 | 1.3:-73655126 | MS.gene029573:CDS |
TTCTAGATCACATTATAAGA+AGG | 0.447293 | 1.3:-73655154 | MS.gene029573:CDS |
CCGACAATGACCCTGTTAAT+CGG | 0.454527 | 1.3:+73654274 | None:intergenic |
TATCATCACTCTGTTCAATC+TGG | 0.455099 | 1.3:+73654815 | None:intergenic |
GATCACATTATAAGAAGGCT+TGG | 0.460558 | 1.3:-73655149 | MS.gene029573:CDS |
ATTACGCCACTTGGACTACC+AGG | 0.474746 | 1.3:+73654418 | None:intergenic |
AGATACTAAATATGTGTTTG+AGG | 0.495892 | 1.3:-73655255 | MS.gene029573:CDS |
AGAAAAGAGTGTGTTGTCAC+TGG | 0.519215 | 1.3:+73655173 | None:intergenic |
GGCAAAGACTATTCAGAGAA+TGG | 0.519295 | 1.3:-73655234 | MS.gene029573:CDS |
ACAGCATCAATTACGCCACT+TGG | 0.527358 | 1.3:+73654409 | None:intergenic |
CCGATTAACAGGGTCATTGT+CGG | 0.532014 | 1.3:-73654274 | MS.gene029573:CDS |
TTTAAGAAGACCAAGAATCA+AGG | 0.533821 | 1.3:-73654316 | MS.gene029573:CDS |
CACGTCGTGAAGCTGTTGAA+TGG | 0.536577 | 1.3:-73655554 | MS.gene029573:CDS |
ATTGAACAGAGTGATGATAA+TGG | 0.537100 | 1.3:-73654811 | MS.gene029573:CDS |
CTGATGGTTCTAACGATTCG+TGG | 0.539073 | 1.3:-73654378 | MS.gene029573:CDS |
TGGTTGTGTTCCTTCTGTGT+TGG | 0.540643 | 1.3:-73654866 | MS.gene029573:CDS |
CGAAAATATGAAGAAATCCC+TGG | 0.561909 | 1.3:-73654436 | MS.gene029573:CDS |
AACATGCAACATTGTAGCAG+TGG | 0.604318 | 1.3:+73654843 | None:intergenic |
CTTCTTAAACACAGGCTCTG+AGG | 0.608564 | 1.3:+73654330 | None:intergenic |
ACTTGAAGGTCTAAGAGAAG+AGG | 0.611584 | 1.3:+73655357 | None:intergenic |
GTAGCAGTGGCCAACACAGA+AGG | 0.618074 | 1.3:+73654856 | None:intergenic |
TTCTAACGATTCGTGGACAG+TGG | 0.621696 | 1.3:-73654371 | MS.gene029573:CDS |
CATTCAACAGCTTCACGACG+TGG | 0.624467 | 1.3:+73655555 | None:intergenic |
TCTAACGATTCGTGGACAGT+GGG | 0.629045 | 1.3:-73654370 | MS.gene029573:CDS |
GCAACAAGCTGAATCATCCA+TGG | 0.629983 | 1.3:+73655426 | None:intergenic |
TAATGTTCTCAAAATCAGCA+AGG | 0.638487 | 1.3:-73654764 | MS.gene029573:intron |
GAATTTGTCACCGATTAACA+GGG | 0.642593 | 1.3:-73654284 | MS.gene029573:CDS |
TTACGCCACTTGGACTACCA+GGG | 0.660070 | 1.3:+73654419 | None:intergenic |
GAAATCCCTGGTAGTCCAAG+TGG | 0.669163 | 1.3:-73654424 | MS.gene029573:CDS |
ACAGAGTGATGATAATGGTG+TGG | 0.694988 | 1.3:-73654806 | MS.gene029573:CDS |
TCAACAAGAAACATATTACG+AGG | 0.716642 | 1.3:-73655616 | MS.gene029573:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTAAACATAAAGTATTA+AGG | + | chr1.3:73655499-73655518 | None:intergenic | 10.0% |
!!! | TTATGTTTGTTTGTTTTTTA+AGG | - | chr1.3:73654921-73654940 | MS.gene029573:intron | 15.0% |
!! | AAACAAACAAACATAAGAAA+AGG | + | chr1.3:73654917-73654936 | None:intergenic | 20.0% |
!! | AACAAACAAACATAAGAAAA+GGG | + | chr1.3:73654916-73654935 | None:intergenic | 20.0% |
!! | AACAACAAACTATGATATAT+TGG | - | chr1.3:73654473-73654492 | MS.gene029573:CDS | 20.0% |
!! | ATTGAAAACTAATCTTCATT+GGG | - | chr1.3:73655077-73655096 | MS.gene029573:intron | 20.0% |
!! | CTTACAAATGCAAATAATTA+TGG | - | chr1.3:73655737-73655756 | MS.gene029573:intron | 20.0% |
!! | CTTTGTTCATTATAAAAAGA+AGG | + | chr1.3:73654277-73654296 | None:intergenic | 20.0% |
!! | TTTATAGATTCAAGATTTGT+TGG | - | chr1.3:73655317-73655336 | MS.gene029573:intron | 20.0% |
!!! | CTTCTTTTTATAATGAACAA+AGG | - | chr1.3:73654275-73654294 | MS.gene029573:CDS | 20.0% |
! | AATTCAATAGAACTACTCAA+TGG | - | chr1.3:73655533-73655552 | MS.gene029573:CDS | 25.0% |
! | AGATACTAAATATGTGTTTG+AGG | - | chr1.3:73654948-73654967 | MS.gene029573:intron | 25.0% |
! | ATTCAATAGAACTACTCAAT+GGG | - | chr1.3:73655534-73655553 | MS.gene029573:CDS | 25.0% |
! | GATTGAAAACTAATCTTCAT+TGG | - | chr1.3:73655076-73655095 | MS.gene029573:intron | 25.0% |
! | TAAACAAAAAACACATGCAA+AGG | + | chr1.3:73655678-73655697 | None:intergenic | 25.0% |
! | TCATACACAATATACACATA+TGG | + | chr1.3:73655561-73655580 | None:intergenic | 25.0% |
! | TTCTAGATCACATTATAAGA+AGG | - | chr1.3:73655049-73655068 | MS.gene029573:intron | 25.0% |
!!! | TGAAAGAGTACTAAAAATGT+TGG | + | chr1.3:73655155-73655174 | None:intergenic | 25.0% |
ACTGTGATGAAGAAGAAAAA+TGG | - | chr1.3:73654400-73654419 | MS.gene029573:CDS | 30.0% | |
ATAGAAGATAACGTACTTGA+AGG | + | chr1.3:73654863-73654882 | None:intergenic | 30.0% | |
ATTGAACAGAGTGATGATAA+TGG | - | chr1.3:73655392-73655411 | MS.gene029573:CDS | 30.0% | |
ATTTCCAAAAAGAGAAACCA+TGG | - | chr1.3:73654760-73654779 | MS.gene029573:intron | 30.0% | |
CTGTGATGAAGAAGAAAAAT+GGG | - | chr1.3:73654401-73654420 | MS.gene029573:CDS | 30.0% | |
CTTAAAGTCAATGCTCATTA+TGG | - | chr1.3:73654675-73654694 | MS.gene029573:intron | 30.0% | |
TAACAAAAGCAGAGGTAAAA+GGG | + | chr1.3:73654508-73654527 | None:intergenic | 30.0% | |
TAATGTTCTCAAAATCAGCA+AGG | - | chr1.3:73655439-73655458 | MS.gene029573:CDS | 30.0% | |
TCAACAAGAAACATATTACG+AGG | - | chr1.3:73654587-73654606 | MS.gene029573:intron | 30.0% | |
TTCTTGTTGAGTTATCTCTT+TGG | + | chr1.3:73654577-73654596 | None:intergenic | 30.0% | |
TTTAAGAAGACCAAGAATCA+AGG | - | chr1.3:73655887-73655906 | MS.gene029573:intron | 30.0% | |
! | CATATTTTGTCCTTGATTCT+TGG | + | chr1.3:73655900-73655919 | None:intergenic | 30.0% |
! | CTTCTTCTATCTGTACTTTT+AGG | - | chr1.3:73655123-73655142 | MS.gene029573:CDS | 30.0% |
! | TTGCTGTTAACTATCTTGAT+AGG | - | chr1.3:73654721-73654740 | MS.gene029573:intron | 30.0% |
!! | ATGGTTTCTCTTTTTGGAAA+TGG | + | chr1.3:73654761-73654780 | None:intergenic | 30.0% |
!!! | TGCATGTGTTTTTTGTTTAC+AGG | - | chr1.3:73655679-73655698 | MS.gene029573:intron | 30.0% |
ATCTTCATTGGGAGTTTCTT+AGG | - | chr1.3:73655088-73655107 | MS.gene029573:CDS | 35.0% | |
ATCTTCTTCAGTGAAGAAGA+GGG | + | chr1.3:73654309-73654328 | None:intergenic | 35.0% | |
CGAAAATATGAAGAAATCCC+TGG | - | chr1.3:73655767-73655786 | MS.gene029573:intron | 35.0% | |
CTAACAAAAGCAGAGGTAAA+AGG | + | chr1.3:73654509-73654528 | None:intergenic | 35.0% | |
GAAAAATGGGAAGATGATGA+AGG | - | chr1.3:73654414-73654433 | MS.gene029573:CDS | 35.0% | |
GATCACATTATAAGAAGGCT+TGG | - | chr1.3:73655054-73655073 | MS.gene029573:intron | 35.0% | |
TATCATCACTCTGTTCAATC+TGG | + | chr1.3:73655391-73655410 | None:intergenic | 35.0% | |
TGATTCTGTCAACACTGAAA+TGG | - | chr1.3:73654998-73655017 | MS.gene029573:intron | 35.0% | |
TTCTGTTCTAACAAAAGCAG+AGG | + | chr1.3:73654516-73654535 | None:intergenic | 35.0% | |
! | AAGTGTGTTGTTGAAGTTGT+TGG | + | chr1.3:73654359-73654378 | None:intergenic | 35.0% |
! | GAATTTGTCACCGATTAACA+GGG | - | chr1.3:73655919-73655938 | MS.gene029573:intron | 35.0% |
! | TCATCCATGGTTTCTCTTTT+TGG | + | chr1.3:73654767-73654786 | None:intergenic | 35.0% |
! | TGAATTTGTCACCGATTAAC+AGG | - | chr1.3:73655918-73655937 | MS.gene029573:intron | 35.0% |
! | TTCTTGGTCTTCTTAAACAC+AGG | + | chr1.3:73655884-73655903 | None:intergenic | 35.0% |
!!! | GATGCTGTTTTTAGTTCTGA+TGG | - | chr1.3:73655809-73655828 | MS.gene029573:intron | 35.0% |
AACATGCAACATTGTAGCAG+TGG | + | chr1.3:73655363-73655382 | None:intergenic | 40.0% | |
ACTTGAAGGTCTAAGAGAAG+AGG | + | chr1.3:73654849-73654868 | None:intergenic | 40.0% | |
CATCTTCTTCAGTGAAGAAG+AGG | + | chr1.3:73654310-73654329 | None:intergenic | 40.0% | |
CTCTTCTTCACTGAAGAAGA+TGG | - | chr1.3:73654308-73654327 | MS.gene029573:CDS | 40.0% | |
GAAGGAGAAGTTGTAGATGA+AGG | - | chr1.3:73654432-73654451 | MS.gene029573:CDS | 40.0% | |
GGCAAAGACTATTCAGAGAA+TGG | - | chr1.3:73654969-73654988 | MS.gene029573:intron | 40.0% | |
! | AGAAAAGAGTGTGTTGTCAC+TGG | + | chr1.3:73655033-73655052 | None:intergenic | 40.0% |
! | GGTGATTGTGATGATGATGA+TGG | + | chr1.3:73654338-73654357 | None:intergenic | 40.0% |
!! | ACAGAGTGATGATAATGGTG+TGG | - | chr1.3:73655397-73655416 | MS.gene029573:CDS | 40.0% |
ACAGCATCAATTACGCCACT+TGG | + | chr1.3:73655797-73655816 | None:intergenic | 45.0% | |
CCGACAATGACCCTGTTAAT+CGG | + | chr1.3:73655932-73655951 | None:intergenic | 45.0% | |
CCGATTAACAGGGTCATTGT+CGG | - | chr1.3:73655929-73655948 | MS.gene029573:intron | 45.0% | |
CTTCTTAAACACAGGCTCTG+AGG | + | chr1.3:73655876-73655895 | None:intergenic | 45.0% | |
GCAACAAGCTGAATCATCCA+TGG | + | chr1.3:73654780-73654799 | None:intergenic | 45.0% | |
TCTAACGATTCGTGGACAGT+GGG | - | chr1.3:73655833-73655852 | MS.gene029573:intron | 45.0% | |
TGGTTGTGTTCCTTCTGTGT+TGG | - | chr1.3:73655337-73655356 | MS.gene029573:intron | 45.0% | |
TTCTAACGATTCGTGGACAG+TGG | - | chr1.3:73655832-73655851 | MS.gene029573:intron | 45.0% | |
!! | CTGATGGTTCTAACGATTCG+TGG | - | chr1.3:73655825-73655844 | MS.gene029573:intron | 45.0% |
ATTACGCCACTTGGACTACC+AGG | + | chr1.3:73655788-73655807 | None:intergenic | 50.0% | |
CACGTCGTGAAGCTGTTGAA+TGG | - | chr1.3:73654649-73654668 | MS.gene029573:intron | 50.0% | |
CATTCAACAGCTTCACGACG+TGG | + | chr1.3:73654651-73654670 | None:intergenic | 50.0% | |
GAAATCCCTGGTAGTCCAAG+TGG | - | chr1.3:73655779-73655798 | MS.gene029573:intron | 50.0% | |
GCAAGGTCAGTAGTAGTAGC+TGG | - | chr1.3:73655456-73655475 | MS.gene029573:CDS | 50.0% | |
TTACGCCACTTGGACTACCA+GGG | + | chr1.3:73655787-73655806 | None:intergenic | 50.0% | |
! | TCAGTGAAGAAGAGGGTGTG+TGG | + | chr1.3:73654302-73654321 | None:intergenic | 50.0% |
GTAGCAGTGGCCAACACAGA+AGG | + | chr1.3:73655350-73655369 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 73654246 | 73655979 | 73654246 | ID=MS.gene029573 |
chr1.3 | mRNA | 73654246 | 73655979 | 73654246 | ID=MS.gene029573.t1;Parent=MS.gene029573 |
chr1.3 | exon | 73655961 | 73655979 | 73655961 | ID=MS.gene029573.t1.exon1;Parent=MS.gene029573.t1 |
chr1.3 | CDS | 73655961 | 73655979 | 73655961 | ID=cds.MS.gene029573.t1;Parent=MS.gene029573.t1 |
chr1.3 | exon | 73655359 | 73655696 | 73655359 | ID=MS.gene029573.t1.exon2;Parent=MS.gene029573.t1 |
chr1.3 | CDS | 73655359 | 73655696 | 73655359 | ID=cds.MS.gene029573.t1;Parent=MS.gene029573.t1 |
chr1.3 | exon | 73655081 | 73655282 | 73655081 | ID=MS.gene029573.t1.exon3;Parent=MS.gene029573.t1 |
chr1.3 | CDS | 73655081 | 73655282 | 73655081 | ID=cds.MS.gene029573.t1;Parent=MS.gene029573.t1 |
chr1.3 | exon | 73654765 | 73654901 | 73654765 | ID=MS.gene029573.t1.exon4;Parent=MS.gene029573.t1 |
chr1.3 | CDS | 73654765 | 73654901 | 73654765 | ID=cds.MS.gene029573.t1;Parent=MS.gene029573.t1 |
chr1.3 | exon | 73654246 | 73654524 | 73654246 | ID=MS.gene029573.t1.exon5;Parent=MS.gene029573.t1 |
chr1.3 | CDS | 73654246 | 73654524 | 73654246 | ID=cds.MS.gene029573.t1;Parent=MS.gene029573.t1 |
Gene Sequence |
Protein sequence |