Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09166.t1 | XP_013455932.1 | 99.6 | 225 | 1 | 0 | 1 | 225 | 1 | 225 | 8.40E-31 | 144.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09166.t1 | Q9FFB3 | 75.3 | 227 | 54 | 1 | 1 | 225 | 1 | 227 | 1.0e-21 | 105.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09166.t1 | I3S694 | 99.6 | 225 | 1 | 0 | 1 | 225 | 1 | 225 | 6.0e-31 | 144.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene09166 | 0.809531 | 1.81E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene09166 | 0.830888 | 2.28E-55 | -1.69E-46 |
| MS.gene049368 | MS.gene09166 | 0.806393 | 8.41E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene09166 | 0.809822 | 1.57E-50 | -1.69E-46 |
| MS.gene049786 | MS.gene09166 | 0.821359 | 4.21E-53 | -1.69E-46 |
| MS.gene051655 | MS.gene09166 | 0.816303 | 5.93E-52 | -1.69E-46 |
| MS.gene051676 | MS.gene09166 | 0.821269 | 4.42E-53 | -1.69E-46 |
| MS.gene051975 | MS.gene09166 | 0.810353 | 1.20E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene09166 | 0.814419 | 1.56E-51 | -1.69E-46 |
| MS.gene052493 | MS.gene09166 | 0.826636 | 2.43E-54 | -1.69E-46 |
| MS.gene053298 | MS.gene09166 | 0.852098 | 5.77E-61 | -1.69E-46 |
| MS.gene053340 | MS.gene09166 | 0.810457 | 1.14E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene09166 | 0.803649 | 3.15E-49 | -1.69E-46 |
| MS.gene054222 | MS.gene09166 | 0.837626 | 4.65E-57 | -1.69E-46 |
| MS.gene054479 | MS.gene09166 | 0.805819 | 1.11E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene09166 | 0.802083 | 6.64E-49 | -1.69E-46 |
| MS.gene054875 | MS.gene09166 | 0.808309 | 3.30E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene09166 | 0.802806 | 4.71E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene09166 | 0.805148 | 1.54E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene09166 | 0.812242 | 4.68E-51 | -1.69E-46 |
| MS.gene055603 | MS.gene09166 | 0.824669 | 7.12E-54 | -1.69E-46 |
| MS.gene055864 | MS.gene09166 | 0.828015 | 1.14E-54 | -1.69E-46 |
| MS.gene056403 | MS.gene09166 | 0.805128 | 1.55E-49 | -1.69E-46 |
| MS.gene056638 | MS.gene09166 | 0.840913 | 6.53E-58 | -1.69E-46 |
| MS.gene056986 | MS.gene09166 | 0.836747 | 7.81E-57 | -1.69E-46 |
| MS.gene057026 | MS.gene09166 | 0.81018 | 1.31E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene09166 | 0.829137 | 6.09E-55 | -1.69E-46 |
| MS.gene057155 | MS.gene09166 | 0.811326 | 7.40E-51 | -1.69E-46 |
| MS.gene057360 | MS.gene09166 | 0.802768 | 4.80E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene09166 | 0.84995 | 2.33E-60 | -1.69E-46 |
| MS.gene059144 | MS.gene09166 | 0.806448 | 8.19E-50 | -1.69E-46 |
| MS.gene059830 | MS.gene09166 | 0.800162 | 1.64E-48 | -1.69E-46 |
| MS.gene059952 | MS.gene09166 | 0.808122 | 3.62E-50 | -1.69E-46 |
| MS.gene060012 | MS.gene09166 | 0.814666 | 1.37E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene09166 | 0.806932 | 6.47E-50 | -1.69E-46 |
| MS.gene060435 | MS.gene09166 | 0.815748 | 7.89E-52 | -1.69E-46 |
| MS.gene060520 | MS.gene09166 | 0.800099 | 1.69E-48 | -1.69E-46 |
| MS.gene060937 | MS.gene09166 | 0.81704 | 4.05E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene033909 | MS.gene09166 | PPI |
| MS.gene96973 | MS.gene09166 | PPI |
| MS.gene09166 | MS.gene75244 | PPI |
| MS.gene09166 | MS.gene025196 | PPI |
| MS.gene018678 | MS.gene09166 | PPI |
| MS.gene09166 | MS.gene75911 | PPI |
| MS.gene020387 | MS.gene09166 | PPI |
| MS.gene051184 | MS.gene09166 | PPI |
| MS.gene09166 | MS.gene98009 | PPI |
| MS.gene23464 | MS.gene09166 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09166.t1 | MTR_4g057565 | 99.556 | 225 | 1 | 0 | 1 | 225 | 1 | 225 | 1.76e-160 | 443 |
| MS.gene09166.t1 | MTR_1g069715 | 31.892 | 185 | 126 | 0 | 1 | 185 | 462 | 646 | 4.65e-23 | 97.4 |
| MS.gene09166.t1 | MTR_2g047875 | 29.412 | 221 | 148 | 1 | 5 | 225 | 1 | 213 | 4.70e-20 | 85.1 |
| MS.gene09166.t1 | MTR_7g097170 | 32.093 | 215 | 130 | 3 | 5 | 214 | 1 | 204 | 4.67e-18 | 79.7 |
| MS.gene09166.t1 | MTR_2g041190 | 30.588 | 170 | 116 | 2 | 7 | 175 | 4 | 172 | 1.02e-14 | 70.9 |
| MS.gene09166.t1 | MTR_8g019700 | 27.684 | 177 | 126 | 2 | 7 | 182 | 4 | 179 | 1.54e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09166.t1 | AT5G22950 | 82.819 | 227 | 37 | 1 | 1 | 225 | 1 | 227 | 2.28e-124 | 352 |
| MS.gene09166.t1 | AT3G45000 | 72.081 | 197 | 53 | 1 | 31 | 225 | 2 | 198 | 5.65e-86 | 253 |
| MS.gene09166.t1 | AT3G45000 | 75.912 | 137 | 31 | 1 | 91 | 225 | 1 | 137 | 3.65e-57 | 178 |
| MS.gene09166.t1 | AT1G03950 | 31.579 | 209 | 137 | 2 | 5 | 213 | 1 | 203 | 4.95e-28 | 106 |
| MS.gene09166.t1 | AT5G44560 | 29.834 | 181 | 127 | 0 | 5 | 185 | 1 | 181 | 9.94e-21 | 87.4 |
| MS.gene09166.t1 | AT5G44560 | 29.213 | 178 | 126 | 0 | 5 | 182 | 1 | 178 | 4.33e-20 | 84.7 |
| MS.gene09166.t1 | AT2G06530 | 29.907 | 214 | 135 | 5 | 4 | 205 | 1 | 211 | 8.67e-17 | 76.6 |
| MS.gene09166.t1 | AT5G44560 | 28.662 | 157 | 112 | 0 | 29 | 185 | 5 | 161 | 1.09e-14 | 70.5 |
| MS.gene09166.t1 | AT5G44560 | 30.534 | 131 | 91 | 0 | 5 | 135 | 1 | 131 | 8.04e-13 | 64.3 |
| MS.gene09166.t1 | AT2G06530 | 29.167 | 192 | 122 | 4 | 25 | 205 | 2 | 190 | 1.13e-12 | 65.1 |
Find 42 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAATAACTGTTGCGGATT+TGG | 0.162141 | 4.3:+43522961 | None:intergenic |
| AAGAAGAAATGGAAGAAATT+AGG | 0.185877 | 4.3:-43518245 | MS.gene09166:CDS |
| TGCATAGCAACAGCCATTTC+AGG | 0.256684 | 4.3:+43518693 | None:intergenic |
| AACTGTTGCGGATTTGGTTT+CGG | 0.312520 | 4.3:+43522967 | None:intergenic |
| CGCAACAGTTATTGAGAGAT+TGG | 0.341374 | 4.3:-43522954 | MS.gene09166:CDS |
| GAACCGTCTGCATGAAAATA+AGG | 0.358366 | 4.3:-43521572 | MS.gene09166:CDS |
| TGACCTGACTTTAGCGAGTC+TGG | 0.371271 | 4.3:+43518221 | None:intergenic |
| AGAAGAAATGGAAGAAATTA+GGG | 0.376649 | 4.3:-43518244 | MS.gene09166:CDS |
| CTACAGAACTTGTGAGATCT+AGG | 0.401420 | 4.3:-43521603 | MS.gene09166:CDS |
| CCTCATGAAGGCTCCTGAAA+TGG | 0.421101 | 4.3:-43518706 | MS.gene09166:CDS |
| TCCTCTGCGGCACTTTGAGC+AGG | 0.453503 | 4.3:+43518385 | None:intergenic |
| TTCAGCAATTGCTCGTACTG+TGG | 0.454062 | 4.3:-43518772 | MS.gene09166:intron |
| TGATTTAGATATTCAGAGAG+AGG | 0.474813 | 4.3:-43522789 | MS.gene09166:intron |
| TGTTGATGATGAAGAAGAAA+TGG | 0.478357 | 4.3:-43518256 | MS.gene09166:CDS |
| TTCTTCATCATCAACACCCT+CGG | 0.485224 | 4.3:+43518263 | None:intergenic |
| GTTTCAGGCAGGAGTAATTG+AGG | 0.506660 | 4.3:-43518557 | MS.gene09166:intron |
| GGGCCAGACTCGCTAAAGTC+AGG | 0.512607 | 4.3:-43518224 | MS.gene09166:intron |
| CTATTAAAGAAGCTGCTAAG+AGG | 0.518339 | 4.3:-43522748 | MS.gene09166:CDS |
| AAAGTCTTAACTGAATTAGC+TGG | 0.521196 | 4.3:-43518460 | MS.gene09166:CDS |
| TCAGCAATTGCTCGTACTGT+GGG | 0.530452 | 4.3:-43518771 | MS.gene09166:intron |
| AACATTGAACGACAAATTCG+CGG | 0.539995 | 4.3:-43522904 | MS.gene09166:intron |
| TGAAGCTGTGAGGAAACAAA+AGG | 0.551851 | 4.3:-43518416 | MS.gene09166:CDS |
| CAATCTCTCAATAACTGTTG+CGG | 0.557549 | 4.3:+43522955 | None:intergenic |
| TGCTCAAAGTGCCGCAGAGG+AGG | 0.582103 | 4.3:-43518383 | MS.gene09166:intron |
| AACTCAATATCAATGCACCT+TGG | 0.594406 | 4.3:-43521541 | MS.gene09166:CDS |
| ACCTGCTCAAAGTGCCGCAG+AGG | 0.595296 | 4.3:-43518386 | MS.gene09166:CDS |
| TGACTCAGCATTAGATTCTG+AGG | 0.600712 | 4.3:-43518515 | MS.gene09166:CDS |
| CAGGAAGATGCTATAGCCGA+GGG | 0.609938 | 4.3:-43518279 | MS.gene09166:CDS |
| GCTTGTCAATAACCTCATGA+AGG | 0.612171 | 4.3:-43518718 | MS.gene09166:CDS |
| ACCTACCAACACTTTCTCCA+AGG | 0.615558 | 4.3:+43521524 | None:intergenic |
| CCATTTCAGGAGCCTTCATG+AGG | 0.615981 | 4.3:+43518706 | None:intergenic |
| GAATGACATTGGTTCTGCAA+AGG | 0.618815 | 4.3:-43522726 | MS.gene09166:intron |
| GCAGGAAGATGCTATAGCCG+AGG | 0.620355 | 4.3:-43518280 | MS.gene09166:intron |
| ATGCACCTTGGAGAAAGTGT+TGG | 0.628455 | 4.3:-43521529 | MS.gene09166:intron |
| ATTGACAAGCTTCATAACCT+CGG | 0.641959 | 4.3:+43518731 | None:intergenic |
| TATATCAGGGCACAATGCAG+AGG | 0.655974 | 4.3:+43518089 | None:intergenic |
| CACAACTTCCTGAAGCTGTG+AGG | 0.670413 | 4.3:-43518426 | MS.gene09166:CDS |
| AACTGCATGTACCTCCTCTG+CGG | 0.671034 | 4.3:+43518372 | None:intergenic |
| GCTGCTAAGAGGAATGACAT+TGG | 0.677222 | 4.3:-43522737 | MS.gene09166:CDS |
| CACAGCTTCAGGAAGTTGTG+CGG | 0.680019 | 4.3:+43518429 | None:intergenic |
| ACATCTATCAAAGAGTGCCG+AGG | 0.689000 | 4.3:-43518748 | MS.gene09166:CDS |
| GTTCAGCAAAGAAATGACCA+AGG | 0.706921 | 4.3:-43518667 | MS.gene09166:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTTTTTTATTTT+GGG | - | chr4.3:43518960-43518979 | MS.gene09166:intron | 0.0% |
| !!! | TTTTTTATTTTTTTTTATTT+TGG | - | chr4.3:43518959-43518978 | MS.gene09166:intron | 0.0% |
| !! | AAAAAAAACCTAAGTTAAAT+AGG | - | chr4.3:43519955-43519974 | MS.gene09166:intron | 15.0% |
| !!! | ATATTTTTTAATCTGTACAA+TGG | - | chr4.3:43521142-43521161 | MS.gene09166:intron | 15.0% |
| !!! | ATTTTATCTATAGTTTTTTG+AGG | - | chr4.3:43520258-43520277 | MS.gene09166:intron | 15.0% |
| !!! | TTTTATTCTTAAATTACTAC+AGG | + | chr4.3:43518447-43518466 | None:intergenic | 15.0% |
| !!! | TTTTTAATTAAGAGTATGTT+TGG | + | chr4.3:43519820-43519839 | None:intergenic | 15.0% |
| !! | AAAATCTAATATCCTTATCA+TGG | - | chr4.3:43519436-43519455 | MS.gene09166:intron | 20.0% |
| !! | AAGATAAAACTTCATGAAAT+TGG | - | chr4.3:43521720-43521739 | MS.gene09166:intron | 20.0% |
| !! | ATGGTTTATGATAAAACATA+GGG | - | chr4.3:43518757-43518776 | MS.gene09166:CDS | 20.0% |
| !! | GTTAATTGCATGATAATTAT+TGG | - | chr4.3:43522496-43522515 | MS.gene09166:intron | 20.0% |
| !! | GTTTCTCTTAAAAAATTTCT+AGG | + | chr4.3:43518697-43518716 | None:intergenic | 20.0% |
| !! | TATGGTTTATGATAAAACAT+AGG | - | chr4.3:43518756-43518775 | MS.gene09166:CDS | 20.0% |
| !!! | AGTGTATATACAAGTTTTTA+TGG | - | chr4.3:43519147-43519166 | MS.gene09166:intron | 20.0% |
| !!! | CATAATTGTTTCATTTTAGA+TGG | - | chr4.3:43521065-43521084 | MS.gene09166:intron | 20.0% |
| !!! | GTTTTATCATAAACCATATT+TGG | + | chr4.3:43518754-43518773 | None:intergenic | 20.0% |
| !!! | TAAGAATAAAATTAGCTTAG+TGG | - | chr4.3:43518456-43518475 | MS.gene09166:CDS | 20.0% |
| !!! | TATGGTGTTTTACAATTATA+AGG | - | chr4.3:43521357-43521376 | MS.gene09166:intron | 20.0% |
| ! | AAGAAGAAATGGAAGAAATT+AGG | - | chr4.3:43522842-43522861 | MS.gene09166:intron | 25.0% |
| ! | AGAAGAAATGGAAGAAATTA+GGG | - | chr4.3:43522843-43522862 | MS.gene09166:intron | 25.0% |
| ! | AGAAGAATCAAGTATCAATT+AGG | + | chr4.3:43518238-43518257 | None:intergenic | 25.0% |
| ! | AGATTTAGTGATTAATGAGT+TGG | - | chr4.3:43518726-43518745 | MS.gene09166:CDS | 25.0% |
| ! | ATGGTATTTGTTCAATTTAC+AGG | - | chr4.3:43519455-43519474 | MS.gene09166:intron | 25.0% |
| ! | ATTGAACAAATACCATGATA+AGG | + | chr4.3:43519451-43519470 | None:intergenic | 25.0% |
| ! | CATAATATAGTCATTGTACA+AGG | + | chr4.3:43522101-43522120 | None:intergenic | 25.0% |
| ! | GAAGAATCAAGTATCAATTA+GGG | + | chr4.3:43518237-43518256 | None:intergenic | 25.0% |
| ! | TCATAAAAAGTTCTACTTTC+TGG | - | chr4.3:43522962-43522981 | MS.gene09166:CDS | 25.0% |
| ! | TGATTATTTGTGGTTATGAT+TGG | - | chr4.3:43518257-43518276 | MS.gene09166:CDS | 25.0% |
| ! | TTGATTCTTCTGATTATTTG+TGG | - | chr4.3:43518247-43518266 | MS.gene09166:CDS | 25.0% |
| !! | AACTGTCTACAGATTTTTAT+AGG | - | chr4.3:43520043-43520062 | MS.gene09166:intron | 25.0% |
| !! | AAGTCTTAATTTTATTCACG+AGG | - | chr4.3:43520759-43520778 | MS.gene09166:intron | 25.0% |
| !! | CAAGTTTACCTATTTAACTT+AGG | + | chr4.3:43519966-43519985 | None:intergenic | 25.0% |
| !! | CAGATTTTTATAGGTTTTTG+AGG | - | chr4.3:43520052-43520071 | MS.gene09166:intron | 25.0% |
| !! | TAAGTGTGATTTTCATACAA+AGG | + | chr4.3:43521692-43521711 | None:intergenic | 25.0% |
| !! | TAGTTTTTGCAAAATCACAA+TGG | + | chr4.3:43519670-43519689 | None:intergenic | 25.0% |
| !! | TCATAAACGAGTTTCTAAAA+AGG | - | chr4.3:43522886-43522905 | MS.gene09166:intron | 25.0% |
| !! | TCATTGGAAATTCCTAATTT+TGG | - | chr4.3:43522285-43522304 | MS.gene09166:intron | 25.0% |
| !! | TGATGATCAAATGTTTGTTA+TGG | - | chr4.3:43520005-43520024 | MS.gene09166:intron | 25.0% |
| !! | TGATTTTCATACAAAGGATT+AGG | + | chr4.3:43521686-43521705 | None:intergenic | 25.0% |
| !! | TTGATAATAGAACTGTTCAT+TGG | - | chr4.3:43522269-43522288 | MS.gene09166:intron | 25.0% |
| !!! | ATGATCAAATGTTTGTTATG+GGG | - | chr4.3:43520007-43520026 | MS.gene09166:intron | 25.0% |
| !!! | CATTTTTAGGTTTTACTTTG+GGG | - | chr4.3:43521938-43521957 | MS.gene09166:intron | 25.0% |
| !!! | GATGATCAAATGTTTGTTAT+GGG | - | chr4.3:43520006-43520025 | MS.gene09166:intron | 25.0% |
| !!! | GCATTTTTAGGTTTTACTTT+GGG | - | chr4.3:43521937-43521956 | MS.gene09166:intron | 25.0% |
| !!! | GTCTTCTTTTTTAGATTTCA+AGG | - | chr4.3:43519374-43519393 | MS.gene09166:intron | 25.0% |
| !!! | GTTTTAAGAGAGATCAAAAA+TGG | + | chr4.3:43518215-43518234 | None:intergenic | 25.0% |
| !!! | TGCATTTTTAGGTTTTACTT+TGG | - | chr4.3:43521936-43521955 | MS.gene09166:intron | 25.0% |
| !!! | TTCATAACCAATGCTATTTT+TGG | - | chr4.3:43519323-43519342 | MS.gene09166:intron | 25.0% |
| !!! | TTTCTTTTGAGAAGATAAAG+TGG | - | chr4.3:43521101-43521120 | MS.gene09166:intron | 25.0% |
| !!! | TTTTTTAATCTGTACAATGG+CGG | - | chr4.3:43521145-43521164 | MS.gene09166:intron | 25.0% |
| AAAAAAGAAGACTGCCTAAA+AGG | + | chr4.3:43519366-43519385 | None:intergenic | 30.0% | |
| AAAGTCTTAACTGAATTAGC+TGG | - | chr4.3:43522627-43522646 | MS.gene09166:intron | 30.0% | |
| AAATTAAAACAGGAAGAGAG+GGG | - | chr4.3:43522001-43522020 | MS.gene09166:intron | 30.0% | |
| AACATGATCAATGTATAGCT+AGG | - | chr4.3:43520453-43520472 | MS.gene09166:intron | 30.0% | |
| AAGGTTCGATAGAATAAAGT+AGG | - | chr4.3:43519393-43519412 | MS.gene09166:intron | 30.0% | |
| AATGTATGTAAGAGTTAGAG+AGG | - | chr4.3:43521536-43521555 | MS.gene09166:CDS | 30.0% | |
| AATTAACTTCTATGACTACG+GGG | + | chr4.3:43522483-43522502 | None:intergenic | 30.0% | |
| AGCCAAATAACAAACTTAAC+AGG | - | chr4.3:43521482-43521501 | MS.gene09166:intron | 30.0% | |
| AGTAAGGAGTTTAGATTAGA+TGG | - | chr4.3:43518639-43518658 | MS.gene09166:intron | 30.0% | |
| AGTTCAATTTCCTGTTAACA+AGG | - | chr4.3:43522734-43522753 | MS.gene09166:CDS | 30.0% | |
| CAAATAACAAACTTAACAGG+AGG | - | chr4.3:43521485-43521504 | MS.gene09166:intron | 30.0% | |
| CAAATTAAAACAGGAAGAGA+GGG | - | chr4.3:43522000-43522019 | MS.gene09166:intron | 30.0% | |
| CAATTAACTTCTATGACTAC+GGG | + | chr4.3:43522484-43522503 | None:intergenic | 30.0% | |
| CTGATATCAAGAAAGAGAAA+AGG | + | chr4.3:43521648-43521667 | None:intergenic | 30.0% | |
| GCAATTAACTTCTATGACTA+CGG | + | chr4.3:43522485-43522504 | None:intergenic | 30.0% | |
| GTACAAACCAAAAATAGCAT+TGG | + | chr4.3:43519333-43519352 | None:intergenic | 30.0% | |
| TACCAGTTGTATGATAATTG+TGG | - | chr4.3:43519866-43519885 | MS.gene09166:intron | 30.0% | |
| TAGTCATCATGAGATATTTG+AGG | - | chr4.3:43522236-43522255 | MS.gene09166:intron | 30.0% | |
| TATCTTAACATGCTATAGCT+AGG | - | chr4.3:43520361-43520380 | MS.gene09166:intron | 30.0% | |
| TGATTTAGATATTCAGAGAG+AGG | - | chr4.3:43518298-43518317 | MS.gene09166:intron | 30.0% | |
| TGCATGTTTGATATCACAAT+GGG | + | chr4.3:43519742-43519761 | None:intergenic | 30.0% | |
| TGGAATGCATTATTATTTGC+AGG | - | chr4.3:43522789-43522808 | MS.gene09166:intron | 30.0% | |
| ! | AATAGCTTGTAAGAAGCTTA+TGG | - | chr4.3:43520970-43520989 | MS.gene09166:intron | 30.0% |
| ! | AGCTAATTTTTATAAGCTCC+AGG | - | chr4.3:43520946-43520965 | MS.gene09166:intron | 30.0% |
| ! | GCTAATTTTTATAAGCTCCA+GGG | - | chr4.3:43520947-43520966 | MS.gene09166:intron | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | - | chr4.3:43518738-43518757 | MS.gene09166:CDS | 30.0% |
| ! | TCATTCTATGGTGTTAATCT+TGG | + | chr4.3:43521319-43521338 | None:intergenic | 30.0% |
| ! | TTCATGAAATTGGAAGTATG+TGG | - | chr4.3:43521730-43521749 | MS.gene09166:intron | 30.0% |
| !! | CTCCTGTTAAGTTTGTTATT+TGG | + | chr4.3:43521487-43521506 | None:intergenic | 30.0% |
| !! | GGGGATATTTTTATATTACC+AGG | - | chr4.3:43520625-43520644 | MS.gene09166:intron | 30.0% |
| !! | TGTTGATGATGAAGAAGAAA+TGG | - | chr4.3:43522831-43522850 | MS.gene09166:intron | 30.0% |
| !! | TTGGTAATGTATTCTGTTTC+AGG | - | chr4.3:43522515-43522534 | MS.gene09166:intron | 30.0% |
| !!! | ATGCTATTTTTGGTTTGTAC+TGG | - | chr4.3:43519333-43519352 | MS.gene09166:intron | 30.0% |
| !!! | CTATAGTTTTTTGAGGTTGA+GGG | - | chr4.3:43520265-43520284 | MS.gene09166:intron | 30.0% |
| !!! | TCTATAGTTTTTTGAGGTTG+AGG | - | chr4.3:43520264-43520283 | MS.gene09166:intron | 30.0% |
| !!! | TTATAGGTTTTTGAGGTTGA+GGG | - | chr4.3:43520059-43520078 | MS.gene09166:intron | 30.0% |
| !!! | TTTATAGGTTTTTGAGGTTG+AGG | - | chr4.3:43520058-43520077 | MS.gene09166:intron | 30.0% |
| AACATTGAACGACAAATTCG+CGG | - | chr4.3:43518183-43518202 | MS.gene09166:intron | 35.0% | |
| AACCTAAAAATGCACCACAA+AGG | + | chr4.3:43521930-43521949 | None:intergenic | 35.0% | |
| AACTCAATATCAATGCACCT+TGG | - | chr4.3:43519546-43519565 | MS.gene09166:intron | 35.0% | |
| AACTGACTGTAATGTCTGTA+TGG | - | chr4.3:43520291-43520310 | MS.gene09166:intron | 35.0% | |
| AAGAGAATAAGTCAGCAAAG+GGG | - | chr4.3:43521447-43521466 | MS.gene09166:intron | 35.0% | |
| AAGGAGTTTAGATTAGATGG+AGG | - | chr4.3:43518642-43518661 | MS.gene09166:intron | 35.0% | |
| ACCATAGAATGACATTGACA+AGG | - | chr4.3:43521327-43521346 | MS.gene09166:intron | 35.0% | |
| ACCTATAGTAGAAAAGATCG+TGG | - | chr4.3:43518564-43518583 | MS.gene09166:intron | 35.0% | |
| ACTTATTCTCTTCTTGACTG+TGG | + | chr4.3:43521439-43521458 | None:intergenic | 35.0% | |
| AGAAAAAGAGAAAGCGAGTT+AGG | - | chr4.3:43520707-43520726 | MS.gene09166:intron | 35.0% | |
| AGAAGAGAATAAGTCAGCAA+AGG | - | chr4.3:43521445-43521464 | MS.gene09166:intron | 35.0% | |
| AGCCACAATTATCATACAAC+TGG | + | chr4.3:43519871-43519890 | None:intergenic | 35.0% | |
| AGCCGCCATTGTAAAAAAAA+GGG | + | chr4.3:43521260-43521279 | None:intergenic | 35.0% | |
| ATCAATGTATAGCTAGGAAC+AGG | - | chr4.3:43520459-43520478 | MS.gene09166:intron | 35.0% | |
| ATTGACAAGCTTCATAACCT+CGG | + | chr4.3:43522359-43522378 | None:intergenic | 35.0% | |
| CAATCTCTCAATAACTGTTG+CGG | + | chr4.3:43518135-43518154 | None:intergenic | 35.0% | |
| CACACTAAGAGGACAAATTA+AGG | + | chr4.3:43519608-43519627 | None:intergenic | 35.0% | |
| CATAACTGAACTTGACTAGT+AGG | - | chr4.3:43521392-43521411 | MS.gene09166:intron | 35.0% | |
| CCAAATTAAAACAGGAAGAG+AGG | - | chr4.3:43521999-43522018 | MS.gene09166:intron | 35.0% | |
| CCATAGAATGACATTGACAA+GGG | - | chr4.3:43521328-43521347 | MS.gene09166:intron | 35.0% | |
| CGAGTTAGGAAAGATTCTAA+AGG | - | chr4.3:43520721-43520740 | MS.gene09166:intron | 35.0% | |
| CTAAAAGAGACCAAACAAGA+GGG | - | chr4.3:43520215-43520234 | MS.gene09166:intron | 35.0% | |
| CTATCCCACTTAATGAGATA+AGG | - | chr4.3:43518799-43518818 | MS.gene09166:intron | 35.0% | |
| CTATTAAAGAAGCTGCTAAG+AGG | - | chr4.3:43518339-43518358 | MS.gene09166:intron | 35.0% | |
| CTCATGATGACTAATTGCAA+AGG | + | chr4.3:43522229-43522248 | None:intergenic | 35.0% | |
| CTCTCAAGTCACACTAATTA+TGG | - | chr4.3:43522769-43522788 | MS.gene09166:CDS | 35.0% | |
| CTTATCTCATTAAGTGGGAT+AGG | + | chr4.3:43518801-43518820 | None:intergenic | 35.0% | |
| GAAAGACAGTACATTGAATG+AGG | + | chr4.3:43519099-43519118 | None:intergenic | 35.0% | |
| GAAGAGAATAAGTCAGCAAA+GGG | - | chr4.3:43521446-43521465 | MS.gene09166:intron | 35.0% | |
| GATCTCGAAATAACTAGCAA+AGG | - | chr4.3:43521592-43521611 | MS.gene09166:CDS | 35.0% | |
| GTAAGAGTTAGAGAGGAAAT+TGG | - | chr4.3:43521543-43521562 | MS.gene09166:CDS | 35.0% | |
| GTAGGTAAGAAACCTTTGAT+AGG | - | chr4.3:43521410-43521429 | MS.gene09166:intron | 35.0% | |
| GTGCATGTTTGATATCACAA+TGG | + | chr4.3:43519743-43519762 | None:intergenic | 35.0% | |
| GTTTCAAAAGGCTAGAAGTT+TGG | + | chr4.3:43519053-43519072 | None:intergenic | 35.0% | |
| TAAAAGAGACCAAACAAGAG+GGG | - | chr4.3:43520216-43520235 | MS.gene09166:intron | 35.0% | |
| TAACAGGAGGTAATAGTTGT+GGG | - | chr4.3:43521498-43521517 | MS.gene09166:intron | 35.0% | |
| TAATGTATTCTGTTTCAGGC+AGG | - | chr4.3:43522519-43522538 | MS.gene09166:intron | 35.0% | |
| TAGCCGCCATTGTAAAAAAA+AGG | + | chr4.3:43521261-43521280 | None:intergenic | 35.0% | |
| TATAGCTAGGAACAGGAAAA+GGG | - | chr4.3:43520374-43520393 | MS.gene09166:intron | 35.0% | |
| TCAGGCGTATATATTAGTGT+TGG | - | chr4.3:43520867-43520886 | MS.gene09166:intron | 35.0% | |
| TGTGCACTTAACATGATCAA+TGG | - | chr4.3:43520444-43520463 | MS.gene09166:intron | 35.0% | |
| TTAACAGGAGGTAATAGTTG+TGG | - | chr4.3:43521497-43521516 | MS.gene09166:intron | 35.0% | |
| TTAGTGTGTGTTGGATATCA+TGG | - | chr4.3:43519620-43519639 | MS.gene09166:intron | 35.0% | |
| TTTAATTGACACCTCCTTTG+TGG | - | chr4.3:43521913-43521932 | MS.gene09166:intron | 35.0% | |
| ! | CAAGCCTTATCTCATTAAGT+GGG | + | chr4.3:43518806-43518825 | None:intergenic | 35.0% |
| ! | GACGTGTAGATTTTGTAGTA+AGG | - | chr4.3:43518623-43518642 | MS.gene09166:intron | 35.0% |
| ! | GCACAACTTTTGACAAATCA+CGG | - | chr4.3:43519759-43519778 | MS.gene09166:intron | 35.0% |
| ! | GGGGATAAAATTTTACTGAG+CGG | - | chr4.3:43521957-43521976 | MS.gene09166:intron | 35.0% |
| ! | TACCCAATTGAAGGCATATT+CGG | - | chr4.3:43519204-43519223 | MS.gene09166:intron | 35.0% |
| ! | TCCACGATCTTTTCTACTAT+AGG | + | chr4.3:43518568-43518587 | None:intergenic | 35.0% |
| ! | TGGTGCTTATGCATGTTTTT+GGG | - | chr4.3:43520887-43520906 | MS.gene09166:intron | 35.0% |
| !! | ATTTTATTCACGAGGCATTC+TGG | - | chr4.3:43520767-43520786 | MS.gene09166:intron | 35.0% |
| !! | TTGGTGCTTATGCATGTTTT+TGG | - | chr4.3:43520886-43520905 | MS.gene09166:intron | 35.0% |
| !! | TTTTATTCACGAGGCATTCT+GGG | - | chr4.3:43520768-43520787 | MS.gene09166:intron | 35.0% |
| !!! | CCTCTCTTCCTGTTTTAATT+TGG | + | chr4.3:43522002-43522021 | None:intergenic | 35.0% |
| !!! | GGTTGCCCTTTTTTTTACAA+TGG | - | chr4.3:43521252-43521271 | MS.gene09166:intron | 35.0% |
| !!! | TGCCCTTTTTTTTACAATGG+CGG | - | chr4.3:43521255-43521274 | MS.gene09166:intron | 35.0% |
| !!! | TTCTAGCCTTTTGAAACAAC+AGG | - | chr4.3:43519056-43519075 | MS.gene09166:intron | 35.0% |
| AAAAAGAGACCAACCTAGAG+GGG | - | chr4.3:43520418-43520437 | MS.gene09166:intron | 40.0% | |
| AACATGCTATAGCTAGGAAC+AGG | - | chr4.3:43520367-43520386 | MS.gene09166:intron | 40.0% | |
| AACTACGCTTTGTGCATGTT+TGG | - | chr4.3:43519685-43519704 | MS.gene09166:intron | 40.0% | |
| ACACCGAATATGCCTTCAAT+TGG | + | chr4.3:43519210-43519229 | None:intergenic | 40.0% | |
| ACCTATTCCACTTAGTCAAC+TGG | + | chr4.3:43519927-43519946 | None:intergenic | 40.0% | |
| AGATCGTGGAAGTTATGCTT+AGG | - | chr4.3:43518578-43518597 | MS.gene09166:intron | 40.0% | |
| AGGCATTCATTCCTTAGTCA+TGG | - | chr4.3:43520645-43520664 | MS.gene09166:intron | 40.0% | |
| AGTACGAGCAATTGCTGAAA+AGG | + | chr4.3:43522314-43522333 | None:intergenic | 40.0% | |
| AGTATGTTTGGTATCGCAGT+GGG | + | chr4.3:43519808-43519827 | None:intergenic | 40.0% | |
| AGTGAGGGCCAAATTAAAAC+AGG | - | chr4.3:43521991-43522010 | MS.gene09166:intron | 40.0% | |
| ATGAAGCACAAGAGCTAACT+TGG | + | chr4.3:43519847-43519866 | None:intergenic | 40.0% | |
| ATGACTAAGGAATGAATGCC+TGG | + | chr4.3:43520646-43520665 | None:intergenic | 40.0% | |
| ATGTGGTCATGTAGAGACTA+GGG | - | chr4.3:43521570-43521589 | MS.gene09166:CDS | 40.0% | |
| ATTCCACTTAGTCAACTGGA+GGG | + | chr4.3:43519923-43519942 | None:intergenic | 40.0% | |
| CAAAAAGAGACCAACCTAGA+GGG | - | chr4.3:43520417-43520436 | MS.gene09166:intron | 40.0% | |
| CAACATAATTGTTCCACTCG+TGG | - | chr4.3:43520318-43520337 | MS.gene09166:intron | 40.0% | |
| CACCGAATATGCCTTCAATT+GGG | + | chr4.3:43519209-43519228 | None:intergenic | 40.0% | |
| CCACTTAATGAGATAAGGCT+TGG | - | chr4.3:43518804-43518823 | MS.gene09166:intron | 40.0% | |
| CCCTTGTCAATGTCATTCTA+TGG | + | chr4.3:43521331-43521350 | None:intergenic | 40.0% | |
| CGCAACAGTTATTGAGAGAT+TGG | - | chr4.3:43518133-43518152 | MS.gene09166:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr4.3:43521186-43521205 | MS.gene09166:intron | 40.0% | |
| CGTTGGATGTGTTGTAATAC+TGG | - | chr4.3:43518493-43518512 | MS.gene09166:CDS | 40.0% | |
| CTAAAAATGCACCACAAAGG+AGG | + | chr4.3:43521927-43521946 | None:intergenic | 40.0% | |
| CTAAGCATGTGCTATACCTT+GGG | - | chr4.3:43520160-43520179 | MS.gene09166:intron | 40.0% | |
| CTACAGAACTTGTGAGATCT+AGG | - | chr4.3:43519484-43519503 | MS.gene09166:intron | 40.0% | |
| CTAGGAATTGTTTAGTCTGC+AGG | - | chr4.3:43521042-43521061 | MS.gene09166:intron | 40.0% | |
| CTATAGCTAGGAACAGGAAA+AGG | - | chr4.3:43520373-43520392 | MS.gene09166:intron | 40.0% | |
| CTCAATAACTGTTGCGGATT+TGG | + | chr4.3:43518129-43518148 | None:intergenic | 40.0% | |
| CTGAAAAGGCAGCCAAAATT+AGG | + | chr4.3:43522300-43522319 | None:intergenic | 40.0% | |
| CTGTCTTTCTGCTGAATGTA+AGG | - | chr4.3:43519110-43519129 | MS.gene09166:intron | 40.0% | |
| GAAAAGGGTCTTAGCAAAAG+AGG | - | chr4.3:43520389-43520408 | MS.gene09166:intron | 40.0% | |
| GAACCGTCTGCATGAAAATA+AGG | - | chr4.3:43519515-43519534 | MS.gene09166:intron | 40.0% | |
| GAATATGCCTTCAATTGGGT+AGG | + | chr4.3:43519205-43519224 | None:intergenic | 40.0% | |
| GATATCCAACACACACTAAG+AGG | + | chr4.3:43519619-43519638 | None:intergenic | 40.0% | |
| GCAGACTAAACAATTCCTAG+AGG | + | chr4.3:43521042-43521061 | None:intergenic | 40.0% | |
| GCAGGAGAAATGAAGTATGA+AGG | + | chr4.3:43522450-43522469 | None:intergenic | 40.0% | |
| GCTAAAAGAGACCAAACAAG+AGG | - | chr4.3:43520214-43520233 | MS.gene09166:intron | 40.0% | |
| GCTTGTCAATAACCTCATGA+AGG | - | chr4.3:43522369-43522388 | MS.gene09166:intron | 40.0% | |
| GGATCTCGAAATAACTAGCA+AGG | - | chr4.3:43521591-43521610 | MS.gene09166:CDS | 40.0% | |
| GGCATTCATTCCTTAGTCAT+GGG | - | chr4.3:43520646-43520665 | MS.gene09166:intron | 40.0% | |
| GTATAGCTAGGAACAGGAAA+AGG | - | chr4.3:43520465-43520484 | MS.gene09166:intron | 40.0% | |
| GTGATCGGTCTTAACATGTA+TGG | + | chr4.3:43519179-43519198 | None:intergenic | 40.0% | |
| GTTCAGCAAAGAAATGACCA+AGG | - | chr4.3:43522420-43522439 | MS.gene09166:intron | 40.0% | |
| TATACCTTGGGACAGGAAAA+GGG | - | chr4.3:43520172-43520191 | MS.gene09166:intron | 40.0% | |
| TATGTGGTCATGTAGAGACT+AGG | - | chr4.3:43521569-43521588 | MS.gene09166:CDS | 40.0% | |
| TATTCCACTTAGTCAACTGG+AGG | + | chr4.3:43519924-43519943 | None:intergenic | 40.0% | |
| TCCAGTTGACTAAGTGGAAT+AGG | - | chr4.3:43519923-43519942 | MS.gene09166:intron | 40.0% | |
| TCTAAGCATGTGCTATACCT+TGG | - | chr4.3:43520159-43520178 | MS.gene09166:intron | 40.0% | |
| TCTTTCTGCTGAATGTAAGG+TGG | - | chr4.3:43519113-43519132 | MS.gene09166:intron | 40.0% | |
| TGAAGCTGTGAGGAAACAAA+AGG | - | chr4.3:43522671-43522690 | MS.gene09166:intron | 40.0% | |
| TGACTCAGCATTAGATTCTG+AGG | - | chr4.3:43522572-43522591 | MS.gene09166:intron | 40.0% | |
| TGCTGAATGTAAGGTGGAAT+AGG | - | chr4.3:43519119-43519138 | MS.gene09166:intron | 40.0% | |
| TGGCTAAGTCATGCATTGTT+TGG | - | chr4.3:43522044-43522063 | MS.gene09166:intron | 40.0% | |
| TTCTTCATCATCAACACCCT+CGG | + | chr4.3:43522827-43522846 | None:intergenic | 40.0% | |
| TTTGTCCTCTTAGTGTGTGT+TGG | - | chr4.3:43519611-43519630 | MS.gene09166:intron | 40.0% | |
| ! | AACTGTTGCGGATTTGGTTT+CGG | + | chr4.3:43518123-43518142 | None:intergenic | 40.0% |
| ! | AATCACATGTGTCGATGTGT+CGG | - | chr4.3:43518837-43518856 | MS.gene09166:intron | 40.0% |
| ! | CAACTTTTGACAAATCACGG+TGG | - | chr4.3:43519762-43519781 | MS.gene09166:intron | 40.0% |
| ! | CCAAGCCTTATCTCATTAAG+TGG | + | chr4.3:43518807-43518826 | None:intergenic | 40.0% |
| ! | CTCCTTTGTGGTGCATTTTT+AGG | - | chr4.3:43521925-43521944 | MS.gene09166:intron | 40.0% |
| ! | GAGAGGAAATTGGAAGTATG+TGG | - | chr4.3:43521553-43521572 | MS.gene09166:CDS | 40.0% |
| ! | GGGGAGCTTATTGAAAGTAT+TGG | - | chr4.3:43520908-43520927 | MS.gene09166:intron | 40.0% |
| ! | TGAAGTATGAAGGCATACCT+TGG | + | chr4.3:43522440-43522459 | None:intergenic | 40.0% |
| ! | TTCTAAAGACTGAGCTTCTG+AGG | - | chr4.3:43520680-43520699 | MS.gene09166:intron | 40.0% |
| ! | TTTTACAATGGCGGCTATAG+TGG | - | chr4.3:43521264-43521283 | MS.gene09166:intron | 40.0% |
| !! | CAATGGGTTTGCTAGAATCA+CGG | + | chr4.3:43519726-43519745 | None:intergenic | 40.0% |
| !! | CCAACACCTGTTGTTTCAAA+AGG | + | chr4.3:43519065-43519084 | None:intergenic | 40.0% |
| !! | GAATGACATTGGTTCTGCAA+AGG | - | chr4.3:43518361-43518380 | MS.gene09166:intron | 40.0% |
| !! | GCAAAAAGAGCCTTGTTAAC+AGG | + | chr4.3:43522747-43522766 | None:intergenic | 40.0% |
| !! | GGTGCTTATGCATGTTTTTG+GGG | - | chr4.3:43520888-43520907 | MS.gene09166:intron | 40.0% |
| !! | GTACTGGTGTATCACCTTTT+AGG | - | chr4.3:43519349-43519368 | MS.gene09166:intron | 40.0% |
| !! | TAGCTTGTACAGGTCCTTTT+GGG | - | chr4.3:43520824-43520843 | MS.gene09166:intron | 40.0% |
| !! | TGGCACACAATCTTTAGGAT+AGG | - | chr4.3:43520338-43520357 | MS.gene09166:intron | 40.0% |
| !! | TTTTGTTTCCTCACAGCTTC+AGG | + | chr4.3:43522672-43522691 | None:intergenic | 40.0% |
| !!! | CCTTTTGAAACAACAGGTGT+TGG | - | chr4.3:43519062-43519081 | MS.gene09166:intron | 40.0% |
| !!! | GAGAAAGTGTTGGTAGGTTT+TGG | - | chr4.3:43519568-43519587 | MS.gene09166:intron | 40.0% |
| !!! | GTGCCTTATTTTCATGCAGA+CGG | + | chr4.3:43519521-43519540 | None:intergenic | 40.0% |
| !!! | GTGCTTATGCATGTTTTTGG+GGG | - | chr4.3:43520889-43520908 | MS.gene09166:intron | 40.0% |
| AAAACAGGAAGAGAGGGGAA+AGG | - | chr4.3:43522006-43522025 | MS.gene09166:intron | 45.0% | |
| AAACAGGAAGAGAGGGGAAA+GGG | - | chr4.3:43522007-43522026 | MS.gene09166:intron | 45.0% | |
| AAGGGTCTTAGCAAAAGAGG+TGG | - | chr4.3:43520392-43520411 | MS.gene09166:intron | 45.0% | |
| AATAAGTCAGCAAAGGGGCA+GGG | - | chr4.3:43521452-43521471 | MS.gene09166:intron | 45.0% | |
| ACAATGGCAATCCGTGATTC+TGG | + | chr4.3:43519654-43519673 | None:intergenic | 45.0% | |
| ACCTACCAACACTTTCTCCA+AGG | + | chr4.3:43519566-43519585 | None:intergenic | 45.0% | |
| ACGCCTGAATAAGCTACTCA+TGG | + | chr4.3:43520855-43520874 | None:intergenic | 45.0% | |
| ACTCGTGGCACACAATCTTT+AGG | - | chr4.3:43520333-43520352 | MS.gene09166:intron | 45.0% | |
| ACTCTTTGCACACAGTCTCT+AGG | - | chr4.3:43520129-43520148 | MS.gene09166:intron | 45.0% | |
| AGAGACTGTGTGCAAAGAGT+GGG | + | chr4.3:43520129-43520148 | None:intergenic | 45.0% | |
| AGCGGTTTACAAGTCAAGTG+AGG | - | chr4.3:43521975-43521994 | MS.gene09166:intron | 45.0% | |
| CAATTGGGTAGGACTGTGAT+CGG | + | chr4.3:43519194-43519213 | None:intergenic | 45.0% | |
| CATTCTGGGTTCATTTGGGT+TGG | - | chr4.3:43520782-43520801 | MS.gene09166:intron | 45.0% | |
| CATTGACAAGGGTTGCTGTA+TGG | - | chr4.3:43521339-43521358 | MS.gene09166:intron | 45.0% | |
| CGACATTAGAGAGAGAGATC+AGG | - | chr4.3:43518537-43518556 | MS.gene09166:CDS | 45.0% | |
| CGTGCTCATCATGTGTAGTT+AGG | + | chr4.3:43521018-43521037 | None:intergenic | 45.0% | |
| CTATACCTTGGGACAGGAAA+AGG | - | chr4.3:43520171-43520190 | MS.gene09166:intron | 45.0% | |
| GAAAAGGGTCTTAGCGAAAG+AGG | - | chr4.3:43520187-43520206 | MS.gene09166:intron | 45.0% | |
| GAGGATAGTCAGATCACTAG+AGG | - | chr4.3:43518661-43518680 | MS.gene09166:intron | 45.0% | |
| GAGTATGTTTGGTATCGCAG+TGG | + | chr4.3:43519809-43519828 | None:intergenic | 45.0% | |
| GCAAAAAGAGACCAACCTAG+AGG | - | chr4.3:43520416-43520435 | MS.gene09166:intron | 45.0% | |
| GCGGTTTACAAGTCAAGTGA+GGG | - | chr4.3:43521976-43521995 | MS.gene09166:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr4.3:43521185-43521204 | MS.gene09166:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr4.3:43521182-43521201 | MS.gene09166:intron | 45.0% | |
| GCTGCTAAGAGGAATGACAT+TGG | - | chr4.3:43518350-43518369 | MS.gene09166:intron | 45.0% | |
| GCTTCTTACAAGCTATTCCC+TGG | + | chr4.3:43520967-43520986 | None:intergenic | 45.0% | |
| GGTCCATGAGTAGCTTATTC+AGG | - | chr4.3:43520849-43520868 | MS.gene09166:intron | 45.0% | |
| GTAATAGTTGTGGGTAGCAG+AGG | - | chr4.3:43521507-43521526 | MS.gene09166:intron | 45.0% | |
| GTGCATGTTTGGTATCACAG+TGG | - | chr4.3:43519696-43519715 | MS.gene09166:intron | 45.0% | |
| GTGTGTGTTGGATATCATGG+TGG | - | chr4.3:43519623-43519642 | MS.gene09166:intron | 45.0% | |
| GTTTCAGGCAGGAGTAATTG+AGG | - | chr4.3:43522530-43522549 | MS.gene09166:intron | 45.0% | |
| TAAAGATTGTGTGCCACGAG+TGG | + | chr4.3:43520334-43520353 | None:intergenic | 45.0% | |
| TACTCATGGACCAACCCAAA+AGG | + | chr4.3:43520795-43520814 | None:intergenic | 45.0% | |
| TAGAGACTGTGTGCAAAGAG+TGG | + | chr4.3:43520130-43520149 | None:intergenic | 45.0% | |
| TCACAGTCCTACCCAATTGA+AGG | - | chr4.3:43519195-43519214 | MS.gene09166:intron | 45.0% | |
| TCAGCAATTGCTCGTACTGT+GGG | - | chr4.3:43522316-43522335 | MS.gene09166:intron | 45.0% | |
| TCGTGGAAGTTATGCTTAGG+TGG | - | chr4.3:43518581-43518600 | MS.gene09166:intron | 45.0% | |
| TGACTGTGGAAGCCTATCAA+AGG | + | chr4.3:43521425-43521444 | None:intergenic | 45.0% | |
| TGCATAGCAACAGCCATTTC+AGG | + | chr4.3:43522397-43522416 | None:intergenic | 45.0% | |
| TGGAGATGAGAAAGTTGCGT+TGG | - | chr4.3:43518476-43518495 | MS.gene09166:CDS | 45.0% | |
| TGTACAATGGCGGCTATACA+GGG | - | chr4.3:43521155-43521174 | MS.gene09166:intron | 45.0% | |
| TTCAGCAATTGCTCGTACTG+TGG | - | chr4.3:43522315-43522334 | MS.gene09166:intron | 45.0% | |
| TTGAGATCTGTCACTGACAC+CGG | - | chr4.3:43518403-43518422 | MS.gene09166:CDS | 45.0% | |
| ! | AATGGCGGCTATAGTGGTTT+TGG | - | chr4.3:43521270-43521289 | MS.gene09166:intron | 45.0% |
| ! | AGCTACTCATGGACTACTCA+TGG | + | chr4.3:43520809-43520828 | None:intergenic | 45.0% |
| ! | AGTCCATGAGTAGCTTGTAC+AGG | - | chr4.3:43520814-43520833 | MS.gene09166:intron | 45.0% |
| ! | ATGCACCTTGGAGAAAGTGT+TGG | - | chr4.3:43519558-43519577 | MS.gene09166:intron | 45.0% |
| ! | ATGGCGGCTATAGTGGTTTT+GGG | - | chr4.3:43521271-43521290 | MS.gene09166:intron | 45.0% |
| ! | GAGGCATTCTGGGTTCATTT+GGG | - | chr4.3:43520778-43520797 | MS.gene09166:intron | 45.0% |
| ! | GCACTGACAGTTCTAATCGA+AGG | + | chr4.3:43518912-43518931 | None:intergenic | 45.0% |
| !! | ACATCTATCAAAGAGTGCCG+AGG | - | chr4.3:43522339-43522358 | MS.gene09166:intron | 45.0% |
| !! | ACCTTGGAGAAAGTGTTGGT+AGG | - | chr4.3:43519562-43519581 | MS.gene09166:intron | 45.0% |
| !! | CATATTCGGTGTCAGACATG+TGG | - | chr4.3:43519218-43519237 | MS.gene09166:intron | 45.0% |
| !! | GTAGCTTGTACAGGTCCTTT+TGG | - | chr4.3:43520823-43520842 | MS.gene09166:intron | 45.0% |
| !! | TGGTGGATTTGCCAGAATCA+CGG | - | chr4.3:43519640-43519659 | MS.gene09166:intron | 45.0% |
| !! | TTGCACACAGTCTCTAGGAT+AGG | - | chr4.3:43520134-43520153 | MS.gene09166:intron | 45.0% |
| !! | TTGTACAGGTCCTTTTGGGT+TGG | - | chr4.3:43520828-43520847 | MS.gene09166:intron | 45.0% |
| AACTGCATGTACCTCCTCTG+CGG | + | chr4.3:43522718-43522737 | None:intergenic | 50.0% | |
| AATGGCGGCTATACAGGGTA+AGG | - | chr4.3:43521160-43521179 | MS.gene09166:intron | 50.0% | |
| ACATGATGAGCACGACCTCT+AGG | - | chr4.3:43521024-43521043 | MS.gene09166:intron | 50.0% | |
| ACCAATCTCCAGCTCGCATA+TGG | - | chr4.3:43520591-43520610 | MS.gene09166:intron | 50.0% | |
| ACTCCCTCCAGTTGACTAAG+TGG | - | chr4.3:43519917-43519936 | MS.gene09166:intron | 50.0% | |
| ACTTCTATGACTACGGGGAG+AGG | + | chr4.3:43522478-43522497 | None:intergenic | 50.0% | |
| AGGGTCTTAGCGAAAGAGGT+AGG | - | chr4.3:43520191-43520210 | MS.gene09166:intron | 50.0% | |
| ATTAGAGCTCCCGCATATGC+AGG | + | chr4.3:43521226-43521245 | None:intergenic | 50.0% | |
| CAACACTAACACGTCAACGC+TGG | + | chr4.3:43519277-43519296 | None:intergenic | 50.0% | |
| CAATCTCCAGCTCGCATATG+GGG | - | chr4.3:43520593-43520612 | MS.gene09166:intron | 50.0% | |
| CACAACTTCCTGAAGCTGTG+AGG | - | chr4.3:43522661-43522680 | MS.gene09166:intron | 50.0% | |
| CACAGCTTCAGGAAGTTGTG+CGG | + | chr4.3:43522661-43522680 | None:intergenic | 50.0% | |
| CAGATGCTCACCCATGACTA+AGG | + | chr4.3:43520659-43520678 | None:intergenic | 50.0% | |
| CAGGAAGATGCTATAGCCGA+GGG | - | chr4.3:43522808-43522827 | MS.gene09166:intron | 50.0% | |
| CATGTGCTATACCTTGGGAC+AGG | - | chr4.3:43520165-43520184 | MS.gene09166:intron | 50.0% | |
| CCAATCTCCAGCTCGCATAT+GGG | - | chr4.3:43520592-43520611 | MS.gene09166:intron | 50.0% | |
| CCATTTCAGGAGCCTTCATG+AGG | + | chr4.3:43522384-43522403 | None:intergenic | 50.0% | |
| CCTCATGAAGGCTCCTGAAA+TGG | - | chr4.3:43522381-43522400 | MS.gene09166:intron | 50.0% | |
| CTGTACAATGGCGGCTATAC+AGG | - | chr4.3:43521154-43521173 | MS.gene09166:intron | 50.0% | |
| GAATAAGTCAGCAAAGGGGC+AGG | - | chr4.3:43521451-43521470 | MS.gene09166:intron | 50.0% | |
| GGACCTGTACAAGCTACTCA+TGG | + | chr4.3:43520820-43520839 | None:intergenic | 50.0% | |
| GGGTCTTAGCGAAAGAGGTA+GGG | - | chr4.3:43520192-43520211 | MS.gene09166:intron | 50.0% | |
| TCTGTCACTGACACCGGATA+CGG | - | chr4.3:43518409-43518428 | MS.gene09166:CDS | 50.0% | |
| TGACCTGACTTTAGCGAGTC+TGG | + | chr4.3:43522869-43522888 | None:intergenic | 50.0% | |
| TTAGAGCTCCCGCATATGCA+GGG | + | chr4.3:43521225-43521244 | None:intergenic | 50.0% | |
| ! | AAGACCCTTTTCCTGTCCCA+AGG | + | chr4.3:43520179-43520198 | None:intergenic | 50.0% |
| ! | ACGGTGGCTCACTGTGATTT+TGG | - | chr4.3:43519778-43519797 | MS.gene09166:intron | 50.0% |
| ! | ATGCGGGAGCTCTAATGCAT+CGG | - | chr4.3:43521230-43521249 | MS.gene09166:intron | 50.0% |
| ! | CGAGGCATTCTGGGTTCATT+TGG | - | chr4.3:43520777-43520796 | MS.gene09166:intron | 50.0% |
| ! | GACAGTTCTAATCGAAGGCG+TGG | + | chr4.3:43518907-43518926 | None:intergenic | 50.0% |
| !! | TGGCGGCTATAGTGGTTTTG+GGG | - | chr4.3:43521272-43521291 | MS.gene09166:intron | 50.0% |
| !!! | GCTATAGTGGTTTTGGGGTC+TGG | - | chr4.3:43521277-43521296 | MS.gene09166:intron | 50.0% |
| CCCATATGCGAGCTGGAGAT+TGG | + | chr4.3:43520595-43520614 | None:intergenic | 55.0% | |
| CGCATATGGGGAAGGGGAAT+GGG | - | chr4.3:43520605-43520624 | MS.gene09166:intron | 55.0% | |
| GCAGGAAGATGCTATAGCCG+AGG | - | chr4.3:43522807-43522826 | MS.gene09166:intron | 55.0% | |
| GCATATGGGGAAGGGGAATG+GGG | - | chr4.3:43520606-43520625 | MS.gene09166:intron | 55.0% | |
| GGGGCTTCTGCGACTTTCTA+CGG | - | chr4.3:43520235-43520254 | MS.gene09166:intron | 55.0% | |
| GTGAGTGTCAGTGCCGTATC+CGG | + | chr4.3:43518425-43518444 | None:intergenic | 55.0% | |
| TAAGTGCACACAGCCCCTCT+AGG | + | chr4.3:43520434-43520453 | None:intergenic | 55.0% | |
| TCCAGCTCGCATATGGGGAA+GGG | - | chr4.3:43520598-43520617 | MS.gene09166:intron | 55.0% | |
| TCGCAGAAGCCCCTCTTGTT+TGG | + | chr4.3:43520228-43520247 | None:intergenic | 55.0% | |
| TCGCATATGGGGAAGGGGAA+TGG | - | chr4.3:43520604-43520623 | MS.gene09166:intron | 55.0% | |
| ! | GTTCTAATCGAAGGCGTGGC+TGG | + | chr4.3:43518903-43518922 | None:intergenic | 55.0% |
| ! | TGCGGGAGCTCTAATGCATC+GGG | - | chr4.3:43521231-43521250 | MS.gene09166:intron | 55.0% |
| !! | AAAGGGTGCTTGGGGGTAAC+TGG | - | chr4.3:43522024-43522043 | MS.gene09166:intron | 55.0% |
| !! | AAGAGAGGGGAAAGGGTGCT+TGG | - | chr4.3:43522014-43522033 | MS.gene09166:intron | 55.0% |
| !! | AGAGAGGGGAAAGGGTGCTT+GGG | - | chr4.3:43522015-43522034 | MS.gene09166:intron | 55.0% |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr4.3:43521213-43521232 | None:intergenic | 60.0% | |
| CCAGCTCGCATATGGGGAAG+GGG | - | chr4.3:43520599-43520618 | MS.gene09166:intron | 60.0% | |
| CTCCAGCTCGCATATGGGGA+AGG | - | chr4.3:43520597-43520616 | MS.gene09166:intron | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr4.3:43521213-43521232 | MS.gene09166:intron | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr4.3:43521214-43521233 | None:intergenic | 60.0% | |
| GGGCCAGACTCGCTAAAGTC+AGG | - | chr4.3:43522863-43522882 | MS.gene09166:intron | 60.0% | |
| TCCTCTGCGGCACTTTGAGC+AGG | + | chr4.3:43522705-43522724 | None:intergenic | 60.0% | |
| TGCACACAGCCCCTCTAGGT+TGG | + | chr4.3:43520430-43520449 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr4.3:43521214-43521233 | MS.gene09166:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr4.3:43521198-43521217 | MS.gene09166:intron | 60.0% |
| !! | ACCTGCTCAAAGTGCCGCAG+AGG | - | chr4.3:43522701-43522720 | MS.gene09166:intron | 60.0% |
| !! | AGAGGGGAAAGGGTGCTTGG+GGG | - | chr4.3:43522017-43522036 | MS.gene09166:intron | 60.0% |
| !! | GAGAGGGGAAAGGGTGCTTG+GGG | - | chr4.3:43522016-43522035 | MS.gene09166:intron | 60.0% |
| !! | TGCTCAAAGTGCCGCAGAGG+AGG | - | chr4.3:43522704-43522723 | MS.gene09166:intron | 60.0% |
| CCCCTTCCCCATATGCGAGC+TGG | + | chr4.3:43520602-43520621 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr4.3:43521215-43521234 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr4.3:43521200-43521219 | None:intergenic | 65.0% | |
| CTACGGGGAGAGGAGAGAGC+AGG | + | chr4.3:43522468-43522487 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr4.3:43521219-43521238 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr4.3:43521220-43521239 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 43518093 | 43523016 | 43518093 | ID=MS.gene09166 |
| chr4.3 | mRNA | 43518093 | 43523016 | 43518093 | ID=MS.gene09166.t1;Parent=MS.gene09166 |
| chr4.3 | exon | 43522905 | 43523016 | 43522905 | ID=MS.gene09166.t1.exon1;Parent=MS.gene09166.t1 |
| chr4.3 | CDS | 43522905 | 43523016 | 43522905 | ID=cds.MS.gene09166.t1;Parent=MS.gene09166.t1 |
| chr4.3 | exon | 43522727 | 43522803 | 43522727 | ID=MS.gene09166.t1.exon2;Parent=MS.gene09166.t1 |
| chr4.3 | CDS | 43522727 | 43522803 | 43522727 | ID=cds.MS.gene09166.t1;Parent=MS.gene09166.t1 |
| chr4.3 | exon | 43521530 | 43521632 | 43521530 | ID=MS.gene09166.t1.exon3;Parent=MS.gene09166.t1 |
| chr4.3 | CDS | 43521530 | 43521632 | 43521530 | ID=cds.MS.gene09166.t1;Parent=MS.gene09166.t1 |
| chr4.3 | exon | 43518668 | 43518789 | 43518668 | ID=MS.gene09166.t1.exon4;Parent=MS.gene09166.t1 |
| chr4.3 | CDS | 43518668 | 43518789 | 43518668 | ID=cds.MS.gene09166.t1;Parent=MS.gene09166.t1 |
| chr4.3 | exon | 43518384 | 43518572 | 43518384 | ID=MS.gene09166.t1.exon5;Parent=MS.gene09166.t1 |
| chr4.3 | CDS | 43518384 | 43518572 | 43518384 | ID=cds.MS.gene09166.t1;Parent=MS.gene09166.t1 |
| chr4.3 | exon | 43518225 | 43518298 | 43518225 | ID=MS.gene09166.t1.exon6;Parent=MS.gene09166.t1 |
| chr4.3 | CDS | 43518225 | 43518298 | 43518225 | ID=cds.MS.gene09166.t1;Parent=MS.gene09166.t1 |
| chr4.3 | exon | 43518093 | 43518111 | 43518093 | ID=MS.gene09166.t1.exon7;Parent=MS.gene09166.t1 |
| chr4.3 | CDS | 43518093 | 43518111 | 43518093 | ID=cds.MS.gene09166.t1;Parent=MS.gene09166.t1 |
| Gene Sequence |
| Protein sequence |
