Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065682.t1 | XP_013470073.1 | 99.5 | 596 | 3 | 0 | 3 | 598 | 2 | 597 | 0.00E+00 | 1107.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065682.t1 | O49485 | 81.5 | 601 | 107 | 1 | 2 | 598 | 3 | 603 | 6.8e-267 | 921.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065682.t1 | A0A072VR00 | 99.5 | 596 | 3 | 0 | 3 | 598 | 2 | 597 | 0.0e+00 | 1107.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049298 | MS.gene065682 | 0.80025 | 1.57E-48 | -1.69E-46 |
MS.gene049361 | MS.gene065682 | 0.800057 | 1.72E-48 | -1.69E-46 |
MS.gene050553 | MS.gene065682 | -0.820835 | 5.56E-53 | -1.69E-46 |
MS.gene050710 | MS.gene065682 | 0.814589 | 1.43E-51 | -1.69E-46 |
MS.gene051838 | MS.gene065682 | -0.812804 | 3.53E-51 | -1.69E-46 |
MS.gene052209 | MS.gene065682 | 0.82318 | 1.59E-53 | -1.69E-46 |
MS.gene053108 | MS.gene065682 | 0.853713 | 1.99E-61 | -1.69E-46 |
MS.gene054742 | MS.gene065682 | 0.801729 | 7.85E-49 | -1.69E-46 |
MS.gene056387 | MS.gene065682 | -0.83332 | 5.71E-56 | -1.69E-46 |
MS.gene05652 | MS.gene065682 | 0.805452 | 1.33E-49 | -1.69E-46 |
MS.gene056618 | MS.gene065682 | 0.803743 | 3.01E-49 | -1.69E-46 |
MS.gene056688 | MS.gene065682 | 0.80815 | 3.57E-50 | -1.69E-46 |
MS.gene057081 | MS.gene065682 | 0.802011 | 6.87E-49 | -1.69E-46 |
MS.gene057356 | MS.gene065682 | 0.835089 | 2.06E-56 | -1.69E-46 |
MS.gene057605 | MS.gene065682 | 0.808335 | 3.26E-50 | -1.69E-46 |
MS.gene057669 | MS.gene065682 | 0.808998 | 2.35E-50 | -1.69E-46 |
MS.gene057734 | MS.gene065682 | -0.800758 | 1.24E-48 | -1.69E-46 |
MS.gene058418 | MS.gene065682 | 0.802037 | 6.79E-49 | -1.69E-46 |
MS.gene05926 | MS.gene065682 | 0.807956 | 3.92E-50 | -1.69E-46 |
MS.gene05960 | MS.gene065682 | 0.812029 | 5.21E-51 | -1.69E-46 |
MS.gene059667 | MS.gene065682 | -0.801584 | 8.40E-49 | -1.69E-46 |
MS.gene06080 | MS.gene065682 | 0.823622 | 1.25E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene065682 | MS.gene032916 | PPI |
MS.gene76590 | MS.gene065682 | PPI |
MS.gene065682 | MS.gene55232 | PPI |
MS.gene034271 | MS.gene065682 | PPI |
MS.gene065682 | MS.gene98151 | PPI |
MS.gene065682 | MS.gene034272 | PPI |
MS.gene070590 | MS.gene065682 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065682.t1 | MTR_1g107480 | 99.497 | 596 | 3 | 0 | 3 | 598 | 2 | 597 | 0.0 | 1189 |
MS.gene065682.t1 | MTR_4g005880 | 78.532 | 545 | 117 | 0 | 54 | 598 | 86 | 630 | 0.0 | 897 |
MS.gene065682.t1 | MTR_3g005970 | 31.621 | 253 | 155 | 5 | 119 | 355 | 117 | 367 | 4.00e-29 | 119 |
MS.gene065682.t1 | MTR_4g013100 | 28.235 | 255 | 174 | 4 | 119 | 372 | 68 | 314 | 1.75e-28 | 116 |
MS.gene065682.t1 | MTR_4g013090 | 28.794 | 257 | 168 | 5 | 120 | 372 | 68 | 313 | 4.09e-28 | 115 |
MS.gene065682.t1 | MTR_1g112510 | 33.910 | 289 | 161 | 8 | 97 | 360 | 63 | 346 | 1.32e-27 | 115 |
MS.gene065682.t1 | MTR_4g012960 | 26.772 | 254 | 176 | 4 | 119 | 372 | 67 | 310 | 6.89e-26 | 108 |
MS.gene065682.t1 | MTR_6g007170 | 30.924 | 249 | 162 | 4 | 120 | 361 | 122 | 367 | 1.71e-23 | 103 |
MS.gene065682.t1 | MTR_4g013135 | 29.297 | 256 | 170 | 6 | 119 | 372 | 67 | 313 | 4.75e-21 | 94.7 |
MS.gene065682.t1 | MTR_8g033390 | 28.788 | 264 | 171 | 5 | 120 | 379 | 76 | 326 | 8.33e-21 | 94.4 |
MS.gene065682.t1 | MTR_2g101840 | 28.462 | 260 | 168 | 7 | 119 | 372 | 67 | 314 | 1.33e-19 | 90.5 |
MS.gene065682.t1 | MTR_6g007175 | 28.629 | 248 | 150 | 5 | 120 | 361 | 91 | 317 | 3.37e-18 | 86.7 |
MS.gene065682.t1 | MTR_8g033410 | 25.197 | 254 | 177 | 5 | 120 | 367 | 79 | 325 | 4.44e-17 | 83.2 |
MS.gene065682.t1 | MTR_8g033400 | 26.482 | 253 | 173 | 6 | 99 | 346 | 67 | 311 | 4.48e-17 | 83.2 |
MS.gene065682.t1 | MTR_7g075830 | 29.707 | 239 | 144 | 8 | 120 | 341 | 57 | 288 | 7.21e-13 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065682.t1 | AT4G34200 | 83.219 | 584 | 94 | 2 | 19 | 598 | 20 | 603 | 0.0 | 981 |
MS.gene065682.t1 | AT3G19480 | 82.155 | 566 | 99 | 1 | 35 | 598 | 23 | 588 | 0.0 | 942 |
MS.gene065682.t1 | AT1G17745 | 78.269 | 543 | 118 | 0 | 56 | 598 | 82 | 624 | 0.0 | 885 |
MS.gene065682.t1 | AT1G17745 | 74.211 | 570 | 120 | 2 | 56 | 598 | 82 | 651 | 0.0 | 864 |
MS.gene065682.t1 | AT1G72190 | 29.181 | 281 | 183 | 5 | 76 | 347 | 77 | 350 | 1.18e-27 | 115 |
MS.gene065682.t1 | AT5G14780 | 31.667 | 240 | 160 | 3 | 126 | 361 | 112 | 351 | 5.29e-27 | 113 |
MS.gene065682.t1 | AT5G14780 | 31.667 | 240 | 160 | 3 | 126 | 361 | 100 | 339 | 7.95e-27 | 112 |
MS.gene065682.t1 | AT1G79870 | 28.627 | 255 | 171 | 6 | 120 | 372 | 68 | 313 | 1.04e-26 | 111 |
MS.gene065682.t1 | AT5G14780 | 31.667 | 240 | 160 | 3 | 126 | 361 | 126 | 365 | 1.22e-26 | 112 |
MS.gene065682.t1 | AT1G68010 | 32.753 | 287 | 167 | 7 | 97 | 360 | 63 | 346 | 4.40e-25 | 108 |
MS.gene065682.t1 | AT1G68010 | 32.986 | 288 | 166 | 8 | 97 | 360 | 63 | 347 | 1.32e-23 | 103 |
MS.gene065682.t1 | AT1G12550 | 28.631 | 241 | 165 | 4 | 120 | 358 | 75 | 310 | 1.46e-23 | 102 |
MS.gene065682.t1 | AT1G68010 | 32.482 | 274 | 159 | 7 | 97 | 347 | 63 | 333 | 1.53e-23 | 103 |
MS.gene065682.t1 | AT2G45630 | 28.125 | 256 | 173 | 6 | 120 | 372 | 91 | 338 | 3.83e-22 | 98.6 |
MS.gene065682.t1 | AT1G79870 | 27.559 | 254 | 156 | 6 | 120 | 372 | 68 | 294 | 2.58e-21 | 95.1 |
Find 185 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATCATTGAGCATCTTAT+TGG | 0.186509 | 1.4:-82906490 | None:intergenic |
GGCGGAGGAGAGAGGGAGTT+TGG | 0.212385 | 1.4:-82905216 | None:intergenic |
CTTGTTAGAGCATTGGATTC+TGG | 0.237598 | 1.4:+82906585 | MS.gene065682:CDS |
GTGAAGGGAGACGGAGGGTT+TGG | 0.252825 | 1.4:-82905172 | None:intergenic |
ACACTTGCTGTAATGGGATT+TGG | 0.255805 | 1.4:+82906291 | MS.gene065682:CDS |
GCTAGTGCCATATCAGATTC+AGG | 0.283199 | 1.4:+82907804 | MS.gene065682:CDS |
CATAACCAACTTGCTGTCTT+TGG | 0.290705 | 1.4:-82906739 | None:intergenic |
GTTCACGAAAACACTGGATA+TGG | 0.294301 | 1.4:-82907649 | None:intergenic |
TGTTGATCTTGCTGAGAAAC+TGG | 0.306465 | 1.4:+82907491 | MS.gene065682:CDS |
TGAAGGGAGACGGAGGGTTT+GGG | 0.332772 | 1.4:-82905171 | None:intergenic |
AAGGTAGCATTATACTTTGC+AGG | 0.338794 | 1.4:+82907910 | MS.gene065682:CDS |
CGTGAAGTGTTTGAATCTTC+CGG | 0.339399 | 1.4:+82905473 | MS.gene065682:CDS |
CACTTGCTGTAATGGGATTT+GGG | 0.344965 | 1.4:+82906292 | MS.gene065682:CDS |
GGAGTTTGGAGGAGAGAGAA+AGG | 0.350829 | 1.4:-82905202 | None:intergenic |
GCTGATCGTGCTCATGCTAT+TGG | 0.358730 | 1.4:+82906390 | MS.gene065682:CDS |
GAGGAGAGAGTTATTCTTGA+TGG | 0.369656 | 1.4:+82907720 | MS.gene065682:CDS |
TCTAACTCCTTTCTTCATCT+TGG | 0.371423 | 1.4:-82906520 | None:intergenic |
GGGAAGACACTTGCTGTAAT+GGG | 0.381131 | 1.4:+82906285 | MS.gene065682:CDS |
GACCTCCCCTGAATCTGATA+TGG | 0.384239 | 1.4:-82907811 | None:intergenic |
ACATGGTCAATACAGGGAAA+TGG | 0.390332 | 1.4:+82906229 | MS.gene065682:intron |
GAAGACGACGAGGGAACGGC+GGG | 0.395159 | 1.4:-82905267 | None:intergenic |
AGCATCACAGAGAGAGATCT+TGG | 0.396721 | 1.4:-82905420 | None:intergenic |
GAGATTCCACGTTAGCAATC+TGG | 0.405437 | 1.4:-82907776 | None:intergenic |
AGACGAGTGTCAAGATCATC+AGG | 0.412057 | 1.4:-82907591 | None:intergenic |
CCCACCTTTCCAATCATACC+TGG | 0.415387 | 1.4:-82907945 | None:intergenic |
ATCTTGGTGCAAAGCTCCTC+AGG | 0.418039 | 1.4:-82905404 | None:intergenic |
CCACGTTAGCAATCTGGACT+TGG | 0.423183 | 1.4:-82907770 | None:intergenic |
ACGGAGGGAGACGGAGAAGG+CGG | 0.423781 | 1.4:-82905234 | None:intergenic |
TGGGAAGACACTTGCTGTAA+TGG | 0.425768 | 1.4:+82906284 | MS.gene065682:CDS |
GGAAAGGTGGGAAGCATCTT+GGG | 0.427465 | 1.4:+82907957 | MS.gene065682:CDS |
TATGTTGGAGTTTCCCTAGT+TGG | 0.429161 | 1.4:+82906264 | MS.gene065682:CDS |
GTAGATCAACCAGGTATGAT+TGG | 0.432608 | 1.4:+82907936 | MS.gene065682:CDS |
CAGCAAGTGTCTTCCCAACT+AGG | 0.432947 | 1.4:-82906278 | None:intergenic |
GGGAAGATGGTGAAGGGAGA+CGG | 0.433199 | 1.4:-82905181 | None:intergenic |
GAGGGAGACGGAGAAGGCGG+AGG | 0.434071 | 1.4:-82905231 | None:intergenic |
AAATAGCAGAAGCTGTCGTT+GGG | 0.435352 | 1.4:+82906925 | MS.gene065682:CDS |
CACGGGATCGCGCTCTTAGC+TGG | 0.436535 | 1.4:+82905620 | MS.gene065682:CDS |
CTCAAGGTTGTTGGTAGAGC+TGG | 0.437574 | 1.4:+82905503 | MS.gene065682:CDS |
TGGAAAGGTGGGAAGCATCT+TGG | 0.437963 | 1.4:+82907956 | MS.gene065682:CDS |
CGCTACCGAACATGGTTGCT+TGG | 0.440707 | 1.4:+82905556 | MS.gene065682:CDS |
CATGGTCAATACAGGGAAAT+GGG | 0.442636 | 1.4:+82906230 | MS.gene065682:intron |
GAGGAGAGAGAAAGGGAAGA+TGG | 0.443990 | 1.4:-82905194 | None:intergenic |
AAACACTTCACGTGAGACTT+TGG | 0.446385 | 1.4:-82905462 | None:intergenic |
GGAAGTAGCGTTAGCGGCGG+CGG | 0.448739 | 1.4:-82905150 | None:intergenic |
GGGTAGGTTGGCTGTCCAAC+TGG | 0.450313 | 1.4:+82907512 | MS.gene065682:CDS |
TTCAGGGGAGGTCACGGTGG+AGG | 0.452073 | 1.4:+82907821 | MS.gene065682:CDS |
ATGTTGGAGTTTCCCTAGTT+GGG | 0.453564 | 1.4:+82906265 | MS.gene065682:CDS |
AACCAACTTGCTGTCTTTGG+TGG | 0.455394 | 1.4:-82906736 | None:intergenic |
GCTGAAAAGCTCGGCGAAGC+TGG | 0.458612 | 1.4:+82905329 | MS.gene065682:CDS |
ATGAATTCAAGTGGATTCTC+AGG | 0.462448 | 1.4:-82907747 | None:intergenic |
AAAGAATCTTTGCAAAGGAT+TGG | 0.466060 | 1.4:+82908074 | MS.gene065682:CDS |
AAGCAGGCTGTGATGGCAAT+TGG | 0.470416 | 1.4:+82908032 | MS.gene065682:CDS |
GCACGATCAGCAGGAGCATA+AGG | 0.471790 | 1.4:-82906378 | None:intergenic |
AACAACCAAGCAACCATGTT+CGG | 0.472937 | 1.4:-82905561 | None:intergenic |
GTAATGGGATTTGGGAAGGT+TGG | 0.474064 | 1.4:+82906300 | MS.gene065682:CDS |
GGATGCACTTGTTAGAGCAT+TGG | 0.476077 | 1.4:+82906578 | MS.gene065682:CDS |
CTGTCGTTGGGGCTTTGAAA+GGG | 0.476987 | 1.4:+82906937 | MS.gene065682:CDS |
GGATTCTGGAATTGTAGCTC+AGG | 0.477094 | 1.4:+82906599 | MS.gene065682:CDS |
GGAGGAGAGAGGGAGTTTGG+AGG | 0.479184 | 1.4:-82905213 | None:intergenic |
ACATTTAATCTTACAACTTG+AGG | 0.482522 | 1.4:-82908127 | None:intergenic |
TTGAGCATCTTATTGGTAGC+AGG | 0.483290 | 1.4:-82906483 | None:intergenic |
AAGATCCAACCTTTGTAAGA+TGG | 0.485383 | 1.4:-82907866 | None:intergenic |
GTAACTTACCTGAGCTTCCA+TGG | 0.486993 | 1.4:-82906802 | None:intergenic |
TTCTCAGCAAGATCAACAAA+TGG | 0.487878 | 1.4:-82907486 | None:intergenic |
TGCTAAGGGGCTTGGTATGA+AGG | 0.488921 | 1.4:+82906341 | MS.gene065682:CDS |
AGATCCAACCTTTGTAAGAT+GGG | 0.489776 | 1.4:-82907865 | None:intergenic |
TGGGAGAGAAGTAAGTATGT+TGG | 0.490032 | 1.4:+82906249 | MS.gene065682:CDS |
GCTAGGCGTGCTAAGGGGCT+TGG | 0.491466 | 1.4:+82906333 | MS.gene065682:CDS |
GGGTTTAGCGTCGAGGGAAG+AGG | 0.493537 | 1.4:-82905294 | None:intergenic |
AAAACAAATTCTTCAACAGC+AGG | 0.493626 | 1.4:-82908104 | None:intergenic |
TTATTGGTAGCAGGCGTAAG+AGG | 0.493736 | 1.4:-82906474 | None:intergenic |
CGAAGACGACGAGGGAACGG+CGG | 0.494219 | 1.4:-82905268 | None:intergenic |
CGGAGAAGGCGGAGGAGAGA+GGG | 0.496667 | 1.4:-82905223 | None:intergenic |
GCCATCACAGCCTGCTTGCG+TGG | 0.497834 | 1.4:-82908026 | None:intergenic |
ATTTGGGAAGGTTGGAACTG+AGG | 0.497988 | 1.4:+82906308 | MS.gene065682:CDS |
AGACGAAGACGACGAGGGAA+CGG | 0.498132 | 1.4:-82905271 | None:intergenic |
TGCCAGTACCATGGAAGCTC+AGG | 0.500424 | 1.4:+82906794 | MS.gene065682:CDS |
GGTTTGGGAAGTAGCGTTAG+CGG | 0.502137 | 1.4:-82905156 | None:intergenic |
GAAATAGCAGAAGCTGTCGT+TGG | 0.503793 | 1.4:+82906924 | MS.gene065682:CDS |
TCCACGCAAGCAGGCTGTGA+TGG | 0.504167 | 1.4:+82908025 | MS.gene065682:CDS |
AAGATGGTGAAGGGAGACGG+AGG | 0.504509 | 1.4:-82905178 | None:intergenic |
CATGGCTAGAAATGTTGCTC+AGG | 0.505750 | 1.4:+82905643 | MS.gene065682:CDS |
TTCACGAAAACACTGGATAT+GGG | 0.506220 | 1.4:-82907648 | None:intergenic |
GTTACTGCAACACCTCATCT+TGG | 0.506235 | 1.4:+82906771 | MS.gene065682:CDS |
TGAGGTTGCTAGGCGTGCTA+AGG | 0.507332 | 1.4:+82906326 | MS.gene065682:CDS |
GGTGGAAGACTCAAGGTTGT+TGG | 0.507539 | 1.4:+82905494 | MS.gene065682:CDS |
TACCTGAGCTTCCATGGTAC+TGG | 0.508674 | 1.4:-82906796 | None:intergenic |
TTGGCTGTCCAACTGGTAGC+AGG | 0.509470 | 1.4:+82907519 | MS.gene065682:CDS |
GAGTTTGGAGGAGAGAGAAA+GGG | 0.509782 | 1.4:-82905201 | None:intergenic |
TGGTATTGATAACGTGGATC+TGG | 0.510283 | 1.4:+82905529 | MS.gene065682:CDS |
AGAGAAAGGGAAGATGGTGA+AGG | 0.510419 | 1.4:-82905188 | None:intergenic |
CTGGCCGCCGCTACCGAACA+TGG | 0.510644 | 1.4:+82905548 | MS.gene065682:CDS |
ACGGAGAAGGCGGAGGAGAG+AGG | 0.514088 | 1.4:-82905224 | None:intergenic |
GCTGTCGTTGGGGCTTTGAA+AGG | 0.514440 | 1.4:+82906936 | MS.gene065682:CDS |
GGGACGGAGGGAGACGGAGA+AGG | 0.516055 | 1.4:-82905237 | None:intergenic |
AACTTGCTGTCTTTGGTGGG+TGG | 0.516646 | 1.4:-82906732 | None:intergenic |
TGCTGAGAAACTGGGTAGGT+TGG | 0.518778 | 1.4:+82907500 | MS.gene065682:CDS |
TCAGGGGAGGTCACGGTGGA+GGG | 0.520156 | 1.4:+82907822 | MS.gene065682:CDS |
CTAGTGCCATATCAGATTCA+GGG | 0.520803 | 1.4:+82907805 | MS.gene065682:CDS |
AGCGGCGGCAACAGTGTTAG+CGG | 0.522757 | 1.4:-82905594 | None:intergenic |
GAGGTTGCTAGGCGTGCTAA+GGG | 0.523235 | 1.4:+82906327 | MS.gene065682:CDS |
GAGAAAGGGAAGATGGTGAA+GGG | 0.525178 | 1.4:-82905187 | None:intergenic |
AGACGACGAGGGAACGGCGG+GGG | 0.527589 | 1.4:-82905265 | None:intergenic |
CTCCTCAGGAGTGAGATTGT+AGG | 0.528475 | 1.4:-82905390 | None:intergenic |
ACCAGGTATGATTGGAAAGG+TGG | 0.534240 | 1.4:+82907944 | MS.gene065682:CDS |
AAGGATTGCTCCACGCAAGC+AGG | 0.534675 | 1.4:+82908016 | MS.gene065682:CDS |
CGCGATCCCGTGTTCAGCGG+CGG | 0.534842 | 1.4:-82905609 | None:intergenic |
ATAGCATGAGCACGATCAGC+AGG | 0.535627 | 1.4:-82906387 | None:intergenic |
CTGTTGCCGCCGCTGAACAC+GGG | 0.536140 | 1.4:+82905603 | MS.gene065682:CDS |
GTTGTGGGGACGGAGGGAGA+CGG | 0.538697 | 1.4:-82905243 | None:intergenic |
CGCTTCCTCCTGCTACCAGT+TGG | 0.547036 | 1.4:-82907527 | None:intergenic |
AGGTTGGAACTGAGGTTGCT+AGG | 0.547137 | 1.4:+82906316 | MS.gene065682:CDS |
ACCAACTTGCTGTCTTTGGT+GGG | 0.548749 | 1.4:-82906735 | None:intergenic |
CAAGCAACCATGTTCGGTAG+CGG | 0.550793 | 1.4:-82905555 | None:intergenic |
GCTGATGCTTCTATCAAAGC+TGG | 0.551395 | 1.4:+82905665 | MS.gene065682:CDS |
ACTGTTGCCGCCGCTGAACA+CGG | 0.551728 | 1.4:+82905602 | MS.gene065682:CDS |
CCAAGTCCAGATTGCTAACG+TGG | 0.553204 | 1.4:+82907770 | MS.gene065682:CDS |
TACTGCAGTCAATGCACCAA+TGG | 0.553293 | 1.4:+82906971 | MS.gene065682:CDS |
ATCAGATTCAGGGGAGGTCA+CGG | 0.555338 | 1.4:+82907815 | MS.gene065682:CDS |
CACGGTGGAGGGTCGTGTGA+AGG | 0.556967 | 1.4:+82907833 | MS.gene065682:CDS |
TGCTGTAATGGGATTTGGGA+AGG | 0.561363 | 1.4:+82906296 | MS.gene065682:CDS |
CTTCGTGCTATGATAACAAA+GGG | 0.568014 | 1.4:+82907615 | MS.gene065682:CDS |
GACGGTGGGTTTAGCGTCGA+GGG | 0.568041 | 1.4:-82905300 | None:intergenic |
CTTTGCAAAGATTCTTTGCG+TGG | 0.570600 | 1.4:-82908068 | None:intergenic |
AAGTGACTTACGCTTCCGCT+AGG | 0.571734 | 1.4:+82907565 | MS.gene065682:CDS |
GAAGTTGATGTGAGTTTGGA+AGG | 0.575576 | 1.4:+82907891 | MS.gene065682:CDS |
ATCTTCCGGTGGAAGACTCA+AGG | 0.576123 | 1.4:+82905487 | MS.gene065682:CDS |
AATGTCAGCTTCATGAGTGT+TGG | 0.576599 | 1.4:+82907993 | MS.gene065682:CDS |
TGTCGTTGGGGCTTTGAAAG+GGG | 0.577535 | 1.4:+82906938 | MS.gene065682:CDS |
AGCAAGTGTCTTCCCAACTA+GGG | 0.578467 | 1.4:-82906277 | None:intergenic |
GCGGCAACAGTGTTAGCGGT+GGG | 0.581834 | 1.4:-82905590 | None:intergenic |
CAACTGGTAGCAGGAGGAAG+CGG | 0.583181 | 1.4:+82907528 | MS.gene065682:CDS |
CCAGGTATGATTGGAAAGGT+GGG | 0.583244 | 1.4:+82907945 | MS.gene065682:CDS |
GTGGAGGGTCGTGTGAAGGA+TGG | 0.585025 | 1.4:+82907837 | MS.gene065682:CDS |
AGATGGTGAAGGGAGACGGA+GGG | 0.591266 | 1.4:-82905177 | None:intergenic |
AGCACCTCTGAGGAAACCAT+TGG | 0.591640 | 1.4:-82906987 | None:intergenic |
GACTTCACTGCTAAACAAAG+AGG | 0.591938 | 1.4:+82907684 | MS.gene065682:CDS |
TGGACTTGGATGAATTCAAG+TGG | 0.592769 | 1.4:-82907756 | None:intergenic |
TCTTCGTGCTATGATAACAA+AGG | 0.593071 | 1.4:+82907614 | MS.gene065682:CDS |
GATCCAACCTTTGTAAGATG+GGG | 0.598278 | 1.4:-82907864 | None:intergenic |
TCAGCTTCATGAGTGTTGGA+AGG | 0.600265 | 1.4:+82907997 | MS.gene065682:CDS |
AAGAGGAGACGAAGACGACG+AGG | 0.601153 | 1.4:-82905277 | None:intergenic |
AGTGACTTACGCTTCCGCTA+GGG | 0.601349 | 1.4:+82907566 | MS.gene065682:CDS |
GAGCGCGATCCCGTGTTCAG+CGG | 0.601676 | 1.4:-82905612 | None:intergenic |
GATCGCGCTCTTAGCTGGCA+TGG | 0.602254 | 1.4:+82905625 | MS.gene065682:CDS |
GTTGTTGGTAGAGCTGGTGT+TGG | 0.603479 | 1.4:+82905509 | MS.gene065682:CDS |
CACGCAAAGAATCTTTGCAA+AGG | 0.603720 | 1.4:+82908069 | MS.gene065682:CDS |
ATTGTTAATGTTGCTCGTGG+TGG | 0.608712 | 1.4:+82906543 | MS.gene065682:CDS |
GGCGGCAACAGTGTTAGCGG+TGG | 0.609033 | 1.4:-82905591 | None:intergenic |
TCATCTTGGTGCCAGTACCA+TGG | 0.610967 | 1.4:+82906785 | MS.gene065682:CDS |
GCAACCATGTTCGGTAGCGG+CGG | 0.611449 | 1.4:-82905552 | None:intergenic |
TGCACCAATGGTTTCCTCAG+AGG | 0.611627 | 1.4:+82906983 | MS.gene065682:CDS |
GGACGGTGGGTTTAGCGTCG+AGG | 0.613960 | 1.4:-82905301 | None:intergenic |
ATGGTACTGGCACCAAGATG+AGG | 0.614100 | 1.4:-82906783 | None:intergenic |
AACAACCTTGAGTCTTCCAC+CGG | 0.614270 | 1.4:-82905492 | None:intergenic |
GTCCTCGTCGCTGAAAAGCT+CGG | 0.619802 | 1.4:+82905320 | MS.gene065682:CDS |
TTGGGAAGTAGCGTTAGCGG+CGG | 0.621158 | 1.4:-82905153 | None:intergenic |
AACTAAGTTCACGAAAACAC+TGG | 0.623332 | 1.4:-82907655 | None:intergenic |
AGGTTGCTAGGCGTGCTAAG+GGG | 0.630349 | 1.4:+82906328 | MS.gene065682:CDS |
TCAACCAGGTATGATTGGAA+AGG | 0.630443 | 1.4:+82907941 | MS.gene065682:CDS |
GTTGATCTTGCTGAGAAACT+GGG | 0.632655 | 1.4:+82907492 | MS.gene065682:CDS |
AGAATTGTTAATGTTGCTCG+TGG | 0.642633 | 1.4:+82906540 | MS.gene065682:CDS |
AGAGGAGACGAAGACGACGA+GGG | 0.647210 | 1.4:-82905276 | None:intergenic |
ACTTCACTGCTAAACAAAGA+GGG | 0.657467 | 1.4:+82907685 | MS.gene065682:CDS |
ACCCACCAAAGACAGCAAGT+TGG | 0.658654 | 1.4:+82906734 | MS.gene065682:CDS |
GAAGTGTTTGAATCTTCCGG+TGG | 0.658805 | 1.4:+82905476 | MS.gene065682:CDS |
ATCCAACCTTTGTAAGATGG+GGG | 0.663549 | 1.4:-82907863 | None:intergenic |
TAGTGCCATATCAGATTCAG+GGG | 0.665071 | 1.4:+82907806 | MS.gene065682:CDS |
GACGAGTGTCAAGATCATCA+GGG | 0.667404 | 1.4:-82907590 | None:intergenic |
AAGATCATCAGGGGCCCTAG+CGG | 0.668439 | 1.4:-82907580 | None:intergenic |
AAGAGGGCTAAGAATTACTG+AGG | 0.668513 | 1.4:+82907701 | MS.gene065682:CDS |
TGCAGGCAAGTAGATCAACC+AGG | 0.669453 | 1.4:+82907927 | MS.gene065682:CDS |
CTCCTACAATCTCACTCCTG+AGG | 0.670177 | 1.4:+82905388 | MS.gene065682:CDS |
CAAAGAGATGAAATCAGCGG+TGG | 0.673605 | 1.4:-82906445 | None:intergenic |
AGATTCAGGGGAGGTCACGG+TGG | 0.674117 | 1.4:+82907818 | MS.gene065682:CDS |
GCTGTCCAACTGGTAGCAGG+AGG | 0.676150 | 1.4:+82907522 | MS.gene065682:CDS |
AAGACGACGAGGGAACGGCG+GGG | 0.677271 | 1.4:-82905266 | None:intergenic |
GATGCTCTCATCGTTCGCAG+TGG | 0.681979 | 1.4:+82905437 | MS.gene065682:CDS |
ACGAGTGTCAAGATCATCAG+GGG | 0.682389 | 1.4:-82907589 | None:intergenic |
TGCCATATCAGATTCAGGGG+AGG | 0.684990 | 1.4:+82907809 | MS.gene065682:CDS |
AATAGCAGAAGCTGTCGTTG+GGG | 0.700433 | 1.4:+82906926 | MS.gene065682:CDS |
GTGCAAAGAGATGAAATCAG+CGG | 0.712158 | 1.4:-82906448 | None:intergenic |
ATCTTGCTGAGAAACTGGGT+AGG | 0.734226 | 1.4:+82907496 | MS.gene065682:CDS |
TGGTGTTGGTATTGATAACG+TGG | 0.740226 | 1.4:+82905523 | MS.gene065682:CDS |
TCGTGGTGGAGTCATTGACG+AGG | 0.747608 | 1.4:+82906557 | MS.gene065682:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAATATAACAAACA+AGG | - | chr1.4:82905728-82905747 | None:intergenic | 10.0% |
!!! | TATTTTTATCATGAAATAAA+AGG | - | chr1.4:82907036-82907055 | None:intergenic | 10.0% |
!! | TAATTTAAGTAAACTAAAAG+TGG | - | chr1.4:82906639-82906658 | None:intergenic | 15.0% |
!!! | TTTACTATTTAGAATGATTT+TGG | - | chr1.4:82907120-82907139 | None:intergenic | 15.0% |
!!! | TTTTTTAGTGTTAGTTATTT+GGG | + | chr1.4:82905770-82905789 | MS.gene065682:intron | 15.0% |
!! | TGAGATCTAATGATATATAT+GGG | + | chr1.4:82905955-82905974 | MS.gene065682:intron | 20.0% |
!! | TTGAGATCTAATGATATATA+TGG | + | chr1.4:82905954-82905973 | MS.gene065682:intron | 20.0% |
!! | TTTGAGAAAATGACATTATT+CGG | - | chr1.4:82906132-82906151 | None:intergenic | 20.0% |
!!! | GTTTTTTAGTGTTAGTTATT+TGG | + | chr1.4:82905769-82905788 | MS.gene065682:intron | 20.0% |
!!! | TCATATATTGAAAACGATTT+TGG | + | chr1.4:82907166-82907185 | MS.gene065682:intron | 20.0% |
!!! | TCGTTTTCAATATATGAATA+TGG | - | chr1.4:82907163-82907182 | None:intergenic | 20.0% |
! | AAAAACACAACAAAATCATC+AGG | - | chr1.4:82905755-82905774 | None:intergenic | 25.0% |
! | AGATCTAATGATATATATGG+GGG | + | chr1.4:82905957-82905976 | MS.gene065682:intron | 25.0% |
! | ATACAAAATGATTCATGGAT+TGG | + | chr1.4:82907374-82907393 | MS.gene065682:intron | 25.0% |
! | ATATTGCTTGGATATAGATA+AGG | - | chr1.4:82907092-82907111 | None:intergenic | 25.0% |
! | ATTAAATACTACTCAAGTGA+AGG | + | chr1.4:82907247-82907266 | MS.gene065682:intron | 25.0% |
! | GAGATCTAATGATATATATG+GGG | + | chr1.4:82905956-82905975 | MS.gene065682:intron | 25.0% |
! | GATTTGAGAAATCTAATACA+TGG | + | chr1.4:82907279-82907298 | MS.gene065682:intron | 25.0% |
! | TCCTAATACAAAATGATTCA+TGG | + | chr1.4:82907369-82907388 | MS.gene065682:intron | 25.0% |
! | TTATCTATATCCAAGCAATA+TGG | + | chr1.4:82907091-82907110 | MS.gene065682:intron | 25.0% |
!! | GCATAAGTTATTAGTTGATA+TGG | + | chr1.4:82906186-82906205 | MS.gene065682:intron | 25.0% |
!! | TAAAATTTTCTGTGTAAAGG+AGG | + | chr1.4:82905875-82905894 | MS.gene065682:intron | 25.0% |
!! | TCCATGAATCATTTTGTATT+AGG | - | chr1.4:82907373-82907392 | None:intergenic | 25.0% |
!! | TGGTAAAATTTTCTGTGTAA+AGG | + | chr1.4:82905872-82905891 | MS.gene065682:intron | 25.0% |
!!! | AAAACGATTTTGGAACAAAA+TGG | + | chr1.4:82907176-82907195 | MS.gene065682:intron | 25.0% |
!!! | AGTATTTAATTTGAACCAGT+TGG | - | chr1.4:82907237-82907256 | None:intergenic | 25.0% |
!!! | ATTGAATTAGTGTTGATACA+TGG | + | chr1.4:82906212-82906231 | MS.gene065682:intron | 25.0% |
!!! | CTTAATGAGTTTTTTTTGCT+CGG | + | chr1.4:82907304-82907323 | MS.gene065682:intron | 25.0% |
AAAACAAATTCTTCAACAGC+AGG | - | chr1.4:82908107-82908126 | None:intergenic | 30.0% | |
AAAGAATCTTTGCAAAGGAT+TGG | + | chr1.4:82908074-82908093 | MS.gene065682:CDS | 30.0% | |
AAGCTATAACTCATAGTCAT+AGG | - | chr1.4:82906839-82906858 | None:intergenic | 30.0% | |
TTGTTAACTACTAGTTGACT+AGG | + | chr1.4:82905841-82905860 | MS.gene065682:intron | 30.0% | |
TTTCAAAGGTTATTAGACAC+TGG | - | chr1.4:82906878-82906897 | None:intergenic | 30.0% | |
! | ATAGTTTGTGTCTTTGTTTC+AGG | + | chr1.4:82906683-82906702 | MS.gene065682:intron | 30.0% |
!! | ATTGGAGTTGGTGATAAATT+TGG | + | chr1.4:82907392-82907411 | MS.gene065682:intron | 30.0% |
!! | ATTTTGGAAACCATATTGCT+TGG | - | chr1.4:82907104-82907123 | None:intergenic | 30.0% |
!!! | TTTTGAAGTTGATGTGAGTT+TGG | + | chr1.4:82907887-82907906 | MS.gene065682:CDS | 30.0% |
AACACCCATTACAGATTACA+CGG | - | chr1.4:82906008-82906027 | None:intergenic | 35.0% | |
AACTAAGTTCACGAAAACAC+TGG | - | chr1.4:82907658-82907677 | None:intergenic | 35.0% | |
AAGATCCAACCTTTGTAAGA+TGG | - | chr1.4:82907869-82907888 | None:intergenic | 35.0% | |
AAGGTAGCATTATACTTTGC+AGG | + | chr1.4:82907910-82907929 | MS.gene065682:CDS | 35.0% | |
ACTTCACTGCTAAACAAAGA+GGG | + | chr1.4:82907685-82907704 | MS.gene065682:CDS | 35.0% | |
AGAATTCACCACACACAAAT+TGG | - | chr1.4:82905921-82905940 | None:intergenic | 35.0% | |
AGAATTGTTAATGTTGCTCG+TGG | + | chr1.4:82906540-82906559 | MS.gene065682:CDS | 35.0% | |
AGATCCAACCTTTGTAAGAT+GGG | - | chr1.4:82907868-82907887 | None:intergenic | 35.0% | |
AGTAACAATATCAAGAGGCA+AGG | - | chr1.4:82907060-82907079 | None:intergenic | 35.0% | |
ATAGTCATAGGCAATTGCTT+AGG | - | chr1.4:82906827-82906846 | None:intergenic | 35.0% | |
CACACACAAATTGGTATATG+AGG | - | chr1.4:82905912-82905931 | None:intergenic | 35.0% | |
CTCATATACCAATTTGTGTG+TGG | + | chr1.4:82905910-82905929 | MS.gene065682:intron | 35.0% | |
CTCATCATTGAGCATCTTAT+TGG | - | chr1.4:82906493-82906512 | None:intergenic | 35.0% | |
CTTCGTGCTATGATAACAAA+GGG | + | chr1.4:82907615-82907634 | MS.gene065682:CDS | 35.0% | |
GAAGCAGTAACAATATCAAG+AGG | - | chr1.4:82907065-82907084 | None:intergenic | 35.0% | |
GATAAAGCCAGCTTCAAAAT+TGG | - | chr1.4:82907340-82907359 | None:intergenic | 35.0% | |
GTTGATACATGGTCAATACA+GGG | + | chr1.4:82906223-82906242 | MS.gene065682:intron | 35.0% | |
TCTAACTCCTTTCTTCATCT+TGG | - | chr1.4:82906523-82906542 | None:intergenic | 35.0% | |
TCTTCCGTGTAATCTGTAAT+GGG | + | chr1.4:82906001-82906020 | MS.gene065682:intron | 35.0% | |
TCTTCGTGCTATGATAACAA+AGG | + | chr1.4:82907614-82907633 | MS.gene065682:CDS | 35.0% | |
TGTTGATACATGGTCAATAC+AGG | + | chr1.4:82906222-82906241 | MS.gene065682:intron | 35.0% | |
TTCACGAAAACACTGGATAT+GGG | - | chr1.4:82907651-82907670 | None:intergenic | 35.0% | |
TTCTCAGCAAGATCAACAAA+TGG | - | chr1.4:82907489-82907508 | None:intergenic | 35.0% | |
TTCTTCCGTGTAATCTGTAA+TGG | + | chr1.4:82906000-82906019 | MS.gene065682:intron | 35.0% | |
TTTGAAAATGATGACCAGGA+AGG | + | chr1.4:82906891-82906910 | MS.gene065682:intron | 35.0% | |
! | AACCTTTGAAAATGATGACC+AGG | + | chr1.4:82906887-82906906 | MS.gene065682:intron | 35.0% |
! | ACATTGTCACTTCTGATCAA+AGG | + | chr1.4:82906058-82906077 | MS.gene065682:intron | 35.0% |
! | ACTTTTGCCAAGATGAAGAA+AGG | + | chr1.4:82906513-82906532 | MS.gene065682:CDS | 35.0% |
! | ATGAATTCAAGTGGATTCTC+AGG | - | chr1.4:82907750-82907769 | None:intergenic | 35.0% |
! | TTCCTGGTCATCATTTTCAA+AGG | - | chr1.4:82906892-82906911 | None:intergenic | 35.0% |
!! | AATGATTCATGGATTGGAGT+TGG | + | chr1.4:82907380-82907399 | MS.gene065682:intron | 35.0% |
!! | TGTAATGGGTGTTAATGTTG+TGG | + | chr1.4:82906015-82906034 | MS.gene065682:intron | 35.0% |
AAACACTTCACGTGAGACTT+TGG | - | chr1.4:82905465-82905484 | None:intergenic | 40.0% | |
AAAGCCAGCTTCAAAATTGG+AGG | - | chr1.4:82907337-82907356 | None:intergenic | 40.0% | |
AAATAGCAGAAGCTGTCGTT+GGG | + | chr1.4:82906925-82906944 | MS.gene065682:CDS | 40.0% | |
AACAACCAAGCAACCATGTT+CGG | - | chr1.4:82905564-82905583 | None:intergenic | 40.0% | |
AAGAGGGCTAAGAATTACTG+AGG | + | chr1.4:82907701-82907720 | MS.gene065682:CDS | 40.0% | |
AAGCCAGCTTCAAAATTGGA+GGG | - | chr1.4:82907336-82907355 | None:intergenic | 40.0% | |
AATGTCAGCTTCATGAGTGT+TGG | + | chr1.4:82907993-82908012 | MS.gene065682:CDS | 40.0% | |
ACATGGTCAATACAGGGAAA+TGG | + | chr1.4:82906229-82906248 | MS.gene065682:intron | 40.0% | |
ATCCAACCTTTGTAAGATGG+GGG | - | chr1.4:82907866-82907885 | None:intergenic | 40.0% | |
ATGTTGGAGTTTCCCTAGTT+GGG | + | chr1.4:82906265-82906284 | MS.gene065682:CDS | 40.0% | |
ATTAGACACTGGTGGCAAAA+GGG | - | chr1.4:82906867-82906886 | None:intergenic | 40.0% | |
ATTGTTAATGTTGCTCGTGG+TGG | + | chr1.4:82906543-82906562 | MS.gene065682:CDS | 40.0% | |
CAAAGGTTATTAGACACTGG+TGG | - | chr1.4:82906875-82906894 | None:intergenic | 40.0% | |
CACGCAAAGAATCTTTGCAA+AGG | + | chr1.4:82908069-82908088 | MS.gene065682:CDS | 40.0% | |
CATGGTCAATACAGGGAAAT+GGG | + | chr1.4:82906230-82906249 | MS.gene065682:intron | 40.0% | |
CTAGTGCCATATCAGATTCA+GGG | + | chr1.4:82907805-82907824 | MS.gene065682:CDS | 40.0% | |
CTTTGCAAAGATTCTTTGCG+TGG | - | chr1.4:82908071-82908090 | None:intergenic | 40.0% | |
GACTTCACTGCTAAACAAAG+AGG | + | chr1.4:82907684-82907703 | MS.gene065682:CDS | 40.0% | |
GAGGAGAGAGTTATTCTTGA+TGG | + | chr1.4:82907720-82907739 | MS.gene065682:CDS | 40.0% | |
GATCCAACCTTTGTAAGATG+GGG | - | chr1.4:82907867-82907886 | None:intergenic | 40.0% | |
GTAGATCAACCAGGTATGAT+TGG | + | chr1.4:82907936-82907955 | MS.gene065682:CDS | 40.0% | |
GTGCAAAGAGATGAAATCAG+CGG | - | chr1.4:82906451-82906470 | None:intergenic | 40.0% | |
GTTCACGAAAACACTGGATA+TGG | - | chr1.4:82907652-82907671 | None:intergenic | 40.0% | |
GTTGATCTTGCTGAGAAACT+GGG | + | chr1.4:82907492-82907511 | MS.gene065682:CDS | 40.0% | |
TAGTGCCATATCAGATTCAG+GGG | + | chr1.4:82907806-82907825 | MS.gene065682:CDS | 40.0% | |
TAGTTGACTAGGTGACGTAA+TGG | + | chr1.4:82905852-82905871 | MS.gene065682:intron | 40.0% | |
TATGTTGGAGTTTCCCTAGT+TGG | + | chr1.4:82906264-82906283 | MS.gene065682:CDS | 40.0% | |
TATTAGACACTGGTGGCAAA+AGG | - | chr1.4:82906868-82906887 | None:intergenic | 40.0% | |
TCAACCAGGTATGATTGGAA+AGG | + | chr1.4:82907941-82907960 | MS.gene065682:CDS | 40.0% | |
TGGACTTGGATGAATTCAAG+TGG | - | chr1.4:82907759-82907778 | None:intergenic | 40.0% | |
TGGGAGAGAAGTAAGTATGT+TGG | + | chr1.4:82906249-82906268 | MS.gene065682:CDS | 40.0% | |
TGTTGATCTTGCTGAGAAAC+TGG | + | chr1.4:82907491-82907510 | MS.gene065682:CDS | 40.0% | |
TTAACACCTGCAAGTCACAA+AGG | - | chr1.4:82907455-82907474 | None:intergenic | 40.0% | |
TTTCAATAGCTACACCTTCC+TGG | - | chr1.4:82906908-82906927 | None:intergenic | 40.0% | |
! | CGTGAAGTGTTTGAATCTTC+CGG | + | chr1.4:82905473-82905492 | MS.gene065682:CDS | 40.0% |
! | GTTTGTGTCTTTGTTTCAGG+CGG | + | chr1.4:82906686-82906705 | MS.gene065682:intron | 40.0% |
! | TGTTGAGCTTGTGAGTTTTG+AGG | + | chr1.4:82906413-82906432 | MS.gene065682:CDS | 40.0% |
! | TTCATTCCTTTGTGACTTGC+AGG | + | chr1.4:82907446-82907465 | MS.gene065682:intron | 40.0% |
! | TTGAGCATCTTATTGGTAGC+AGG | - | chr1.4:82906486-82906505 | None:intergenic | 40.0% |
! | TTGGTGATAAATTTGGCGAC+TGG | + | chr1.4:82907399-82907418 | MS.gene065682:intron | 40.0% |
!! | ACACTTGCTGTAATGGGATT+TGG | + | chr1.4:82906291-82906310 | MS.gene065682:CDS | 40.0% |
!! | CACTTGCTGTAATGGGATTT+GGG | + | chr1.4:82906292-82906311 | MS.gene065682:CDS | 40.0% |
!! | CATAACCAACTTGCTGTCTT+TGG | - | chr1.4:82906742-82906761 | None:intergenic | 40.0% |
!! | CTTGTTAGAGCATTGGATTC+TGG | + | chr1.4:82906585-82906604 | MS.gene065682:CDS | 40.0% |
!! | GAAGTTGATGTGAGTTTGGA+AGG | + | chr1.4:82907891-82907910 | MS.gene065682:CDS | 40.0% |
!! | TGGTATTGATAACGTGGATC+TGG | + | chr1.4:82905529-82905548 | MS.gene065682:CDS | 40.0% |
!! | TGGTGTTGGTATTGATAACG+TGG | + | chr1.4:82905523-82905542 | MS.gene065682:CDS | 40.0% |
!!! | TATCCCTCCAATTTTGAAGC+TGG | + | chr1.4:82907330-82907349 | MS.gene065682:intron | 40.0% |
AACAACCTTGAGTCTTCCAC+CGG | - | chr1.4:82905495-82905514 | None:intergenic | 45.0% | |
AATAGCAGAAGCTGTCGTTG+GGG | + | chr1.4:82906926-82906945 | MS.gene065682:CDS | 45.0% | |
ACCAGGTATGATTGGAAAGG+TGG | + | chr1.4:82907944-82907963 | MS.gene065682:CDS | 45.0% | |
ACGAGTGTCAAGATCATCAG+GGG | - | chr1.4:82907592-82907611 | None:intergenic | 45.0% | |
AGACGAGTGTCAAGATCATC+AGG | - | chr1.4:82907594-82907613 | None:intergenic | 45.0% | |
AGAGAAAGGGAAGATGGTGA+AGG | - | chr1.4:82905191-82905210 | None:intergenic | 45.0% | |
AGCAAGTGTCTTCCCAACTA+GGG | - | chr1.4:82906280-82906299 | None:intergenic | 45.0% | |
AGCATCACAGAGAGAGATCT+TGG | - | chr1.4:82905423-82905442 | None:intergenic | 45.0% | |
ATCTTGCTGAGAAACTGGGT+AGG | + | chr1.4:82907496-82907515 | MS.gene065682:CDS | 45.0% | |
ATTTGGGAAGGTTGGAACTG+AGG | + | chr1.4:82906308-82906327 | MS.gene065682:CDS | 45.0% | |
CAAAGAGATGAAATCAGCGG+TGG | - | chr1.4:82906448-82906467 | None:intergenic | 45.0% | |
CATGGCTAGAAATGTTGCTC+AGG | + | chr1.4:82905643-82905662 | MS.gene065682:CDS | 45.0% | |
CCAGGTATGATTGGAAAGGT+GGG | + | chr1.4:82907945-82907964 | MS.gene065682:CDS | 45.0% | |
GAAATAGCAGAAGCTGTCGT+TGG | + | chr1.4:82906924-82906943 | MS.gene065682:CDS | 45.0% | |
GACGAGTGTCAAGATCATCA+GGG | - | chr1.4:82907593-82907612 | None:intergenic | 45.0% | |
GAGAAAGGGAAGATGGTGAA+GGG | - | chr1.4:82905190-82905209 | None:intergenic | 45.0% | |
GAGATTCCACGTTAGCAATC+TGG | - | chr1.4:82907779-82907798 | None:intergenic | 45.0% | |
GAGTTTGGAGGAGAGAGAAA+GGG | - | chr1.4:82905204-82905223 | None:intergenic | 45.0% | |
GCTAGTGCCATATCAGATTC+AGG | + | chr1.4:82907804-82907823 | MS.gene065682:CDS | 45.0% | |
GCTGATGCTTCTATCAAAGC+TGG | + | chr1.4:82905665-82905684 | MS.gene065682:CDS | 45.0% | |
GTAACTTACCTGAGCTTCCA+TGG | - | chr1.4:82906805-82906824 | None:intergenic | 45.0% | |
GTTACTGCAACACCTCATCT+TGG | + | chr1.4:82906771-82906790 | MS.gene065682:CDS | 45.0% | |
TACTGCAGTCAATGCACCAA+TGG | + | chr1.4:82906971-82906990 | MS.gene065682:CDS | 45.0% | |
TCAACTGCTATGTGTCCAAC+TGG | + | chr1.4:82907219-82907238 | MS.gene065682:intron | 45.0% | |
TTAGACACTGGTGGCAAAAG+GGG | - | chr1.4:82906866-82906885 | None:intergenic | 45.0% | |
! | GAAGTGTTTGAATCTTCCGG+TGG | + | chr1.4:82905476-82905495 | MS.gene065682:CDS | 45.0% |
! | GGATGCACTTGTTAGAGCAT+TGG | + | chr1.4:82906578-82906597 | MS.gene065682:CDS | 45.0% |
! | GTAATGGGATTTGGGAAGGT+TGG | + | chr1.4:82906300-82906319 | MS.gene065682:CDS | 45.0% |
! | TGCTGTAATGGGATTTGGGA+AGG | + | chr1.4:82906296-82906315 | MS.gene065682:CDS | 45.0% |
! | TTATTGGTAGCAGGCGTAAG+AGG | - | chr1.4:82906477-82906496 | None:intergenic | 45.0% |
! | TTTTGTTCCTAGCACCTCTG+AGG | - | chr1.4:82907000-82907019 | None:intergenic | 45.0% |
!! | AACCAACTTGCTGTCTTTGG+TGG | - | chr1.4:82906739-82906758 | None:intergenic | 45.0% |
!! | ACCAACTTGCTGTCTTTGGT+GGG | - | chr1.4:82906738-82906757 | None:intergenic | 45.0% |
!! | GGATTCTGGAATTGTAGCTC+AGG | + | chr1.4:82906599-82906618 | MS.gene065682:CDS | 45.0% |
!! | GGGAAGACACTTGCTGTAAT+GGG | + | chr1.4:82906285-82906304 | MS.gene065682:CDS | 45.0% |
!! | TCAGCTTCATGAGTGTTGGA+AGG | + | chr1.4:82907997-82908016 | MS.gene065682:CDS | 45.0% |
!! | TGGGAAGACACTTGCTGTAA+TGG | + | chr1.4:82906284-82906303 | MS.gene065682:CDS | 45.0% |
!!! | TGAGCTTGTGAGTTTTGAGG+AGG | + | chr1.4:82906416-82906435 | MS.gene065682:CDS | 45.0% |
!! | ACTTAAATTAATAATTAATT+GGG | + | chr1.4:82906649-82906668 | MS.gene065682:intron | 5.0% |
!! | TACTTAAATTAATAATTAAT+TGG | + | chr1.4:82906648-82906667 | MS.gene065682:intron | 5.0% |
AAGCAGGCTGTGATGGCAAT+TGG | + | chr1.4:82908032-82908051 | MS.gene065682:CDS | 50.0% | |
AAGTGACTTACGCTTCCGCT+AGG | + | chr1.4:82907565-82907584 | MS.gene065682:CDS | 50.0% | |
ACCCACCAAAGACAGCAAGT+TGG | + | chr1.4:82906734-82906753 | MS.gene065682:CDS | 50.0% | |
AGGTTGGAACTGAGGTTGCT+AGG | + | chr1.4:82906316-82906335 | MS.gene065682:CDS | 50.0% | |
AGTGACTTACGCTTCCGCTA+GGG | + | chr1.4:82907566-82907585 | MS.gene065682:CDS | 50.0% | |
ATAGCATGAGCACGATCAGC+AGG | - | chr1.4:82906390-82906409 | None:intergenic | 50.0% | |
ATCAGATTCAGGGGAGGTCA+CGG | + | chr1.4:82907815-82907834 | MS.gene065682:CDS | 50.0% | |
ATCTTCCGGTGGAAGACTCA+AGG | + | chr1.4:82905487-82905506 | MS.gene065682:CDS | 50.0% | |
CAAGCAACCATGTTCGGTAG+CGG | - | chr1.4:82905558-82905577 | None:intergenic | 50.0% | |
CAGCAAGTGTCTTCCCAACT+AGG | - | chr1.4:82906281-82906300 | None:intergenic | 50.0% | |
CCAAGTCCAGATTGCTAACG+TGG | + | chr1.4:82907770-82907789 | MS.gene065682:CDS | 50.0% | |
CCACGTTAGCAATCTGGACT+TGG | - | chr1.4:82907773-82907792 | None:intergenic | 50.0% | |
CCCACCTTTCCAATCATACC+TGG | - | chr1.4:82907948-82907967 | None:intergenic | 50.0% | |
CTCCTACAATCTCACTCCTG+AGG | + | chr1.4:82905388-82905407 | MS.gene065682:CDS | 50.0% | |
CTCCTCAGGAGTGAGATTGT+AGG | - | chr1.4:82905393-82905412 | None:intergenic | 50.0% | |
GACCTCCCCTGAATCTGATA+TGG | - | chr1.4:82907814-82907833 | None:intergenic | 50.0% | |
GAGGAGAGAGAAAGGGAAGA+TGG | - | chr1.4:82905197-82905216 | None:intergenic | 50.0% | |
GCTGATCGTGCTCATGCTAT+TGG | + | chr1.4:82906390-82906409 | MS.gene065682:CDS | 50.0% | |
GGAGTTTGGAGGAGAGAGAA+AGG | - | chr1.4:82905205-82905224 | None:intergenic | 50.0% | |
GGTGGAAGACTCAAGGTTGT+TGG | + | chr1.4:82905494-82905513 | MS.gene065682:CDS | 50.0% | |
GGTTTGGGAAGTAGCGTTAG+CGG | - | chr1.4:82905159-82905178 | None:intergenic | 50.0% | |
GTCCCCCATCTTACAAAGGT+TGG | + | chr1.4:82907861-82907880 | MS.gene065682:CDS | 50.0% | |
TACCTGAGCTTCCATGGTAC+TGG | - | chr1.4:82906799-82906818 | None:intergenic | 50.0% | |
TCAGTGTCAGACACTCACAC+AGG | - | chr1.4:82906089-82906108 | None:intergenic | 50.0% | |
TGCACCAATGGTTTCCTCAG+AGG | + | chr1.4:82906983-82907002 | MS.gene065682:CDS | 50.0% | |
TGCAGGCAAGTAGATCAACC+AGG | + | chr1.4:82907927-82907946 | MS.gene065682:CDS | 50.0% | |
TGCCATATCAGATTCAGGGG+AGG | + | chr1.4:82907809-82907828 | MS.gene065682:CDS | 50.0% | |
TGCTGAGAAACTGGGTAGGT+TGG | + | chr1.4:82907500-82907519 | MS.gene065682:CDS | 50.0% | |
TGGTGTCCCCCATCTTACAA+AGG | + | chr1.4:82907857-82907876 | MS.gene065682:CDS | 50.0% | |
! | AGCACCTCTGAGGAAACCAT+TGG | - | chr1.4:82906990-82907009 | None:intergenic | 50.0% |
! | ATCTTGGTGCAAAGCTCCTC+AGG | - | chr1.4:82905407-82905426 | None:intergenic | 50.0% |
! | CTCAAGGTTGTTGGTAGAGC+TGG | + | chr1.4:82905503-82905522 | MS.gene065682:CDS | 50.0% |
! | GGCGGCTCTTGATGTTTTCA+CGG | + | chr1.4:82906704-82906723 | MS.gene065682:intron | 50.0% |
! | GGCTCTTGATGTTTTCACGG+TGG | + | chr1.4:82906707-82906726 | MS.gene065682:CDS | 50.0% |
! | GTTGTTGGTAGAGCTGGTGT+TGG | + | chr1.4:82905509-82905528 | MS.gene065682:CDS | 50.0% |
! | TGCTAAGGGGCTTGGTATGA+AGG | + | chr1.4:82906341-82906360 | MS.gene065682:CDS | 50.0% |
!! | AACTTGCTGTCTTTGGTGGG+TGG | - | chr1.4:82906735-82906754 | None:intergenic | 50.0% |
!! | ATGGTACTGGCACCAAGATG+AGG | - | chr1.4:82906786-82906805 | None:intergenic | 50.0% |
!! | ATGGTTTCCTCAGAGGTGCT+AGG | + | chr1.4:82906990-82907009 | MS.gene065682:intron | 50.0% |
!! | CTGTCGTTGGGGCTTTGAAA+GGG | + | chr1.4:82906937-82906956 | MS.gene065682:CDS | 50.0% |
!! | GGAAAGGTGGGAAGCATCTT+GGG | + | chr1.4:82907957-82907976 | MS.gene065682:CDS | 50.0% |
!! | TCATCTTGGTGCCAGTACCA+TGG | + | chr1.4:82906785-82906804 | MS.gene065682:CDS | 50.0% |
!! | TGGAAAGGTGGGAAGCATCT+TGG | + | chr1.4:82907956-82907975 | MS.gene065682:CDS | 50.0% |
!! | TGTCGTTGGGGCTTTGAAAG+GGG | + | chr1.4:82906938-82906957 | MS.gene065682:CDS | 50.0% |
AAGAGGAGACGAAGACGACG+AGG | - | chr1.4:82905280-82905299 | None:intergenic | 55.0% | |
AAGATCATCAGGGGCCCTAG+CGG | - | chr1.4:82907583-82907602 | None:intergenic | 55.0% | |
AAGATGGTGAAGGGAGACGG+AGG | - | chr1.4:82905181-82905200 | None:intergenic | 55.0% | |
AAGGATTGCTCCACGCAAGC+AGG | + | chr1.4:82908016-82908035 | MS.gene065682:CDS | 55.0% | |
AGACGAAGACGACGAGGGAA+CGG | - | chr1.4:82905274-82905293 | None:intergenic | 55.0% | |
AGAGGAGACGAAGACGACGA+GGG | - | chr1.4:82905279-82905298 | None:intergenic | 55.0% | |
AGATGGTGAAGGGAGACGGA+GGG | - | chr1.4:82905180-82905199 | None:intergenic | 55.0% | |
AGGTTGCTAGGCGTGCTAAG+GGG | + | chr1.4:82906328-82906347 | MS.gene065682:CDS | 55.0% | |
CAACTGGTAGCAGGAGGAAG+CGG | + | chr1.4:82907528-82907547 | MS.gene065682:CDS | 55.0% | |
CGCTACCGAACATGGTTGCT+TGG | + | chr1.4:82905556-82905575 | MS.gene065682:CDS | 55.0% | |
GAGGTTGCTAGGCGTGCTAA+GGG | + | chr1.4:82906327-82906346 | MS.gene065682:CDS | 55.0% | |
GATGCTCTCATCGTTCGCAG+TGG | + | chr1.4:82905437-82905456 | MS.gene065682:CDS | 55.0% | |
GGGAAGATGGTGAAGGGAGA+CGG | - | chr1.4:82905184-82905203 | None:intergenic | 55.0% | |
GTCCTCGTCGCTGAAAAGCT+CGG | + | chr1.4:82905320-82905339 | MS.gene065682:CDS | 55.0% | |
TGAAGGGAGACGGAGGGTTT+GGG | - | chr1.4:82905174-82905193 | None:intergenic | 55.0% | |
TGAGGTTGCTAGGCGTGCTA+AGG | + | chr1.4:82906326-82906345 | MS.gene065682:CDS | 55.0% | |
TGCCAGTACCATGGAAGCTC+AGG | + | chr1.4:82906794-82906813 | MS.gene065682:CDS | 55.0% | |
TTGGCTGTCCAACTGGTAGC+AGG | + | chr1.4:82907519-82907538 | MS.gene065682:CDS | 55.0% | |
TTGGGAAGTAGCGTTAGCGG+CGG | - | chr1.4:82905156-82905175 | None:intergenic | 55.0% | |
! | GAGCTTTTCAGCGACGAGGA+CGG | - | chr1.4:82905321-82905340 | None:intergenic | 55.0% |
! | GCACGATCAGCAGGAGCATA+AGG | - | chr1.4:82906381-82906400 | None:intergenic | 55.0% |
! | TCGTGGTGGAGTCATTGACG+AGG | + | chr1.4:82906557-82906576 | MS.gene065682:CDS | 55.0% |
! | TTTTCAGCGACGAGGACGGT+GGG | - | chr1.4:82905317-82905336 | None:intergenic | 55.0% |
!! | GCTGTCGTTGGGGCTTTGAA+AGG | + | chr1.4:82906936-82906955 | MS.gene065682:CDS | 55.0% |
ACTGTTGCCGCCGCTGAACA+CGG | + | chr1.4:82905602-82905621 | MS.gene065682:CDS | 60.0% | |
AGATTCAGGGGAGGTCACGG+TGG | + | chr1.4:82907818-82907837 | MS.gene065682:CDS | 60.0% | |
AGCGGCGGCAACAGTGTTAG+CGG | - | chr1.4:82905597-82905616 | None:intergenic | 60.0% | |
CGCTTCCTCCTGCTACCAGT+TGG | - | chr1.4:82907530-82907549 | None:intergenic | 60.0% | |
GATCGCGCTCTTAGCTGGCA+TGG | + | chr1.4:82905625-82905644 | MS.gene065682:CDS | 60.0% | |
GCGGCAACAGTGTTAGCGGT+GGG | - | chr1.4:82905593-82905612 | None:intergenic | 60.0% | |
GCTGAAAAGCTCGGCGAAGC+TGG | + | chr1.4:82905329-82905348 | MS.gene065682:CDS | 60.0% | |
GCTGTCCAACTGGTAGCAGG+AGG | + | chr1.4:82907522-82907541 | MS.gene065682:CDS | 60.0% | |
GGAGGAGAGAGGGAGTTTGG+AGG | - | chr1.4:82905216-82905235 | None:intergenic | 60.0% | |
GTGAAGGGAGACGGAGGGTT+TGG | - | chr1.4:82905175-82905194 | None:intergenic | 60.0% | |
GTGGAGGGTCGTGTGAAGGA+TGG | + | chr1.4:82907837-82907856 | MS.gene065682:CDS | 60.0% | |
TCCACGCAAGCAGGCTGTGA+TGG | + | chr1.4:82908025-82908044 | MS.gene065682:CDS | 60.0% | |
! | CTTTTCAGCGACGAGGACGG+TGG | - | chr1.4:82905318-82905337 | None:intergenic | 60.0% |
! | GACGGTGGGTTTAGCGTCGA+GGG | - | chr1.4:82905303-82905322 | None:intergenic | 60.0% |
! | GCAACCATGTTCGGTAGCGG+CGG | - | chr1.4:82905555-82905574 | None:intergenic | 60.0% |
! | GGGTAGGTTGGCTGTCCAAC+TGG | + | chr1.4:82907512-82907531 | MS.gene065682:CDS | 60.0% |
! | GGGTTTAGCGTCGAGGGAAG+AGG | - | chr1.4:82905297-82905316 | None:intergenic | 60.0% |
AAGACGACGAGGGAACGGCG+GGG | - | chr1.4:82905269-82905288 | None:intergenic | 65.0% | |
ACGGAGAAGGCGGAGGAGAG+AGG | - | chr1.4:82905227-82905246 | None:intergenic | 65.0% | |
ACGGAGGGAGACGGAGAAGG+CGG | - | chr1.4:82905237-82905256 | None:intergenic | 65.0% | |
CACGGGATCGCGCTCTTAGC+TGG | + | chr1.4:82905620-82905639 | MS.gene065682:CDS | 65.0% | |
CACGGTGGAGGGTCGTGTGA+AGG | + | chr1.4:82907833-82907852 | MS.gene065682:CDS | 65.0% | |
CGAAGACGACGAGGGAACGG+CGG | - | chr1.4:82905271-82905290 | None:intergenic | 65.0% | |
CGGAGAAGGCGGAGGAGAGA+GGG | - | chr1.4:82905226-82905245 | None:intergenic | 65.0% | |
CTGTTGCCGCCGCTGAACAC+GGG | + | chr1.4:82905603-82905622 | MS.gene065682:CDS | 65.0% | |
GAAGACGACGAGGGAACGGC+GGG | - | chr1.4:82905270-82905289 | None:intergenic | 65.0% | |
GAGCGCGATCCCGTGTTCAG+CGG | - | chr1.4:82905615-82905634 | None:intergenic | 65.0% | |
GCCATCACAGCCTGCTTGCG+TGG | - | chr1.4:82908029-82908048 | None:intergenic | 65.0% | |
GCTAGGCGTGCTAAGGGGCT+TGG | + | chr1.4:82906333-82906352 | MS.gene065682:CDS | 65.0% | |
GGAAGTAGCGTTAGCGGCGG+CGG | - | chr1.4:82905153-82905172 | None:intergenic | 65.0% | |
GGCGGAGGAGAGAGGGAGTT+TGG | - | chr1.4:82905219-82905238 | None:intergenic | 65.0% | |
GGCGGCAACAGTGTTAGCGG+TGG | - | chr1.4:82905594-82905613 | None:intergenic | 65.0% | |
GTTGTGGGGACGGAGGGAGA+CGG | - | chr1.4:82905246-82905265 | None:intergenic | 65.0% | |
TCAGGGGAGGTCACGGTGGA+GGG | + | chr1.4:82907822-82907841 | MS.gene065682:CDS | 65.0% | |
TTCAGGGGAGGTCACGGTGG+AGG | + | chr1.4:82907821-82907840 | MS.gene065682:CDS | 65.0% | |
! | CGCCGAGCTTTTCAGCGACG+AGG | - | chr1.4:82905325-82905344 | None:intergenic | 65.0% |
! | GGACGGTGGGTTTAGCGTCG+AGG | - | chr1.4:82905304-82905323 | None:intergenic | 65.0% |
AACGGCGGGGGTTGTGGGGA+CGG | - | chr1.4:82905256-82905275 | None:intergenic | 70.0% | |
AGACGACGAGGGAACGGCGG+GGG | - | chr1.4:82905268-82905287 | None:intergenic | 70.0% | |
AGGGAACGGCGGGGGTTGTG+GGG | - | chr1.4:82905260-82905279 | None:intergenic | 70.0% | |
CGCGATCCCGTGTTCAGCGG+CGG | - | chr1.4:82905612-82905631 | None:intergenic | 70.0% | |
CTGGCCGCCGCTACCGAACA+TGG | + | chr1.4:82905548-82905567 | MS.gene065682:CDS | 70.0% | |
GAGGGAACGGCGGGGGTTGT+GGG | - | chr1.4:82905261-82905280 | None:intergenic | 70.0% | |
GAGGGAGACGGAGAAGGCGG+AGG | - | chr1.4:82905234-82905253 | None:intergenic | 70.0% | |
GGGACGGAGGGAGACGGAGA+AGG | - | chr1.4:82905240-82905259 | None:intergenic | 70.0% | |
CGAGGGAACGGCGGGGGTTG+TGG | - | chr1.4:82905262-82905281 | None:intergenic | 75.0% | |
GCGGGGGTTGTGGGGACGGA+GGG | - | chr1.4:82905252-82905271 | None:intergenic | 75.0% | |
! | GGCGGGGGTTGTGGGGACGG+AGG | - | chr1.4:82905253-82905272 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 82905146 | 82908139 | 82905146 | ID=MS.gene065682 |
chr1.4 | mRNA | 82905146 | 82908139 | 82905146 | ID=MS.gene065682.t1;Parent=MS.gene065682 |
chr1.4 | exon | 82905146 | 82905686 | 82905146 | ID=MS.gene065682.t1.exon1;Parent=MS.gene065682.t1 |
chr1.4 | CDS | 82905146 | 82905686 | 82905146 | ID=cds.MS.gene065682.t1;Parent=MS.gene065682.t1 |
chr1.4 | exon | 82906244 | 82906620 | 82906244 | ID=MS.gene065682.t1.exon2;Parent=MS.gene065682.t1 |
chr1.4 | CDS | 82906244 | 82906620 | 82906244 | ID=cds.MS.gene065682.t1;Parent=MS.gene065682.t1 |
chr1.4 | exon | 82906705 | 82906815 | 82906705 | ID=MS.gene065682.t1.exon3;Parent=MS.gene065682.t1 |
chr1.4 | CDS | 82906705 | 82906815 | 82906705 | ID=cds.MS.gene065682.t1;Parent=MS.gene065682.t1 |
chr1.4 | exon | 82906909 | 82907004 | 82906909 | ID=MS.gene065682.t1.exon4;Parent=MS.gene065682.t1 |
chr1.4 | CDS | 82906909 | 82907004 | 82906909 | ID=cds.MS.gene065682.t1;Parent=MS.gene065682.t1 |
chr1.4 | exon | 82907468 | 82908139 | 82907468 | ID=MS.gene065682.t1.exon5;Parent=MS.gene065682.t1 |
chr1.4 | CDS | 82907468 | 82908139 | 82907468 | ID=cds.MS.gene065682.t1;Parent=MS.gene065682.t1 |
Gene Sequence |
Protein sequence |