AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051742


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051742.t1 MTR_7g053500 96.760 463 15 0 1 463 1 463 0.0 929
MS.gene051742.t1 MTR_7g053500 97.668 386 9 0 78 463 1 386 0.0 790
MS.gene051742.t1 MTR_8g012400 71.058 463 129 3 1 463 6 463 0.0 703
MS.gene051742.t1 MTR_8g012400 73.057 386 101 1 78 463 1 383 0.0 614
MS.gene051742.t1 MTR_4g088155 55.150 466 199 3 1 463 4 462 0.0 564
MS.gene051742.t1 MTR_1g056640 41.921 458 238 7 27 460 39 492 1.55e-123 369
MS.gene051742.t1 MTR_5g085580 40.940 447 247 6 27 460 26 468 1.15e-120 360
MS.gene051742.t1 MTR_6g088885 39.783 460 260 9 4 458 7 454 3.03e-114 345
MS.gene051742.t1 MTR_4g069940 37.443 438 264 6 27 460 30 461 2.26e-103 316
MS.gene051742.t1 MTR_3g116510 36.739 460 273 9 3 458 9 454 1.56e-99 306
MS.gene051742.t1 MTR_4g010200 42.135 356 200 5 2 355 8 359 5.06e-99 302
MS.gene051742.t1 MTR_3g065460 35.065 462 279 8 1 459 3 446 1.33e-94 294
MS.gene051742.t1 MTR_4g132280 37.474 475 263 10 5 459 7 467 3.95e-94 294
MS.gene051742.t1 MTR_8g102340 36.952 433 229 8 27 458 29 418 5.65e-94 292
MS.gene051742.t1 MTR_8g085720 34.633 436 269 6 27 459 27 449 8.84e-93 290
MS.gene051742.t1 MTR_1g022160 36.105 457 260 9 27 458 25 474 1.38e-92 289
MS.gene051742.t1 MTR_1g022160 36.105 457 260 9 27 458 25 474 2.18e-91 286
MS.gene051742.t1 MTR_1g031900 33.406 461 288 8 1 458 1 445 1.01e-89 282
MS.gene051742.t1 MTR_4g084480 43.385 325 178 5 27 350 26 345 1.05e-89 278
MS.gene051742.t1 MTR_4g084480 43.385 325 178 5 27 350 33 352 1.30e-89 278
MS.gene051742.t1 MTR_1g031900 33.406 461 288 8 1 458 1 445 1.46e-89 282
MS.gene051742.t1 MTR_4g084480 43.385 325 178 5 27 350 33 352 1.59e-89 278
MS.gene051742.t1 MTR_1g022160 35.778 450 257 9 27 451 25 467 5.74e-89 280
MS.gene051742.t1 MTR_3g080410 42.593 324 181 4 24 346 24 343 1.89e-88 274
MS.gene051742.t1 MTR_5g078200 33.477 463 286 9 1 459 1 445 1.95e-88 283
MS.gene051742.t1 MTR_4g083500 36.659 461 269 10 15 459 33 486 4.05e-88 279
MS.gene051742.t1 MTR_4g052970 40.419 334 193 5 27 359 30 358 1.04e-87 273
MS.gene051742.t1 MTR_3g083580 32.972 461 283 9 4 458 6 446 1.58e-87 276
MS.gene051742.t1 MTR_5g078200 34.272 426 263 7 37 459 1 412 6.56e-87 278
MS.gene051742.t1 MTR_2g019345 41.092 348 198 5 1 348 1 341 1.71e-86 270
MS.gene051742.t1 MTR_2g086530 39.344 366 198 9 2 360 10 358 5.17e-86 269
MS.gene051742.t1 MTR_2g086530 40.176 341 185 8 27 360 9 337 4.04e-85 266
MS.gene051742.t1 MTR_7g026340 37.585 439 253 11 27 458 24 448 1.18e-84 267
MS.gene051742.t1 MTR_1g007810 45.483 321 165 6 27 345 17 329 4.39e-84 263
MS.gene051742.t1 MTR_1g077990 41.667 324 182 5 27 349 32 349 7.07e-82 259
MS.gene051742.t1 MTR_4g114850 36.858 331 204 4 21 350 21 347 1.65e-79 251
MS.gene051742.t1 MTR_4g114850 36.858 331 204 4 21 350 21 347 2.12e-79 251
MS.gene051742.t1 MTR_4g114850 36.858 331 204 4 21 350 21 347 4.21e-79 251
MS.gene051742.t1 MTR_1g022160 38.154 325 195 5 27 349 25 345 2.34e-71 232
MS.gene051742.t1 MTR_3g116510 37.576 330 192 7 133 458 1 320 4.22e-70 226
MS.gene051742.t1 MTR_1g052430 38.199 322 185 7 27 346 33 342 2.70e-67 221
MS.gene051742.t1 MTR_2g034470 35.347 331 200 8 23 351 27 345 1.76e-65 215
MS.gene051742.t1 MTR_4g076470 36.337 344 194 11 4 344 3 324 2.16e-64 211
MS.gene051742.t1 MTR_2g034440 35.093 322 195 8 23 342 19 328 2.18e-64 211
MS.gene051742.t1 MTR_2g034480 35.227 352 207 11 3 351 9 342 6.13e-64 211
MS.gene051742.t1 MTR_4g076255 36.420 324 187 8 27 349 26 331 1.46e-62 206
MS.gene051742.t1 MTR_4g076430 36.390 349 197 11 4 349 3 329 5.99e-62 204
MS.gene051742.t1 MTR_1g053320 31.034 464 286 17 9 459 15 457 7.86e-62 209
MS.gene051742.t1 MTR_4g076570 34.347 329 204 6 19 346 15 332 1.52e-61 204
MS.gene051742.t1 MTR_7g081350 34.675 323 199 6 22 344 23 333 1.75e-61 204
MS.gene051742.t1 MTR_4g076490 34.203 345 205 9 14 355 85 410 6.01e-61 205
MS.gene051742.t1 MTR_8g092070 32.880 441 271 16 27 459 35 458 6.77e-61 209
MS.gene051742.t1 MTR_4g076500 36.280 328 190 9 18 341 69 381 1.73e-60 202
MS.gene051742.t1 MTR_4g076440 35.530 349 200 11 4 349 3 329 4.42e-60 200
MS.gene051742.t1 MTR_2g034470 34.579 321 196 8 33 351 2 310 4.79e-60 199
MS.gene051742.t1 MTR_4g112025 30.472 466 289 19 7 459 14 457 6.88e-58 199
MS.gene051742.t1 MTR_1g010120 30.193 467 284 18 6 458 10 448 3.66e-56 194
MS.gene051742.t1 MTR_2g027560 31.828 443 276 16 24 458 26 450 8.36e-56 193
MS.gene051742.t1 MTR_7g081370 33.962 318 185 6 27 344 29 321 1.04e-55 188
MS.gene051742.t1 MTR_4g124440 31.034 435 264 19 38 458 39 451 1.21e-54 190
MS.gene051742.t1 MTR_3g095050 29.957 464 298 17 5 459 11 456 3.18e-54 189
MS.gene051742.t1 MTR_5g081720 36.688 308 183 8 45 349 56 354 3.25e-52 181
MS.gene051742.t1 MTR_3g108600 29.773 440 265 15 27 458 32 435 6.64e-52 182
MS.gene051742.t1 MTR_3g031770 28.222 450 293 16 18 459 19 446 5.31e-50 177
MS.gene051742.t1 MTR_7g085390 26.966 445 291 19 27 458 27 450 5.34e-41 153
MS.gene051742.t1 MTR_6g032820 26.636 428 285 17 27 442 27 437 5.61e-40 149
MS.gene051742.t1 MTR_4g134280 31.638 354 215 15 113 458 2 336 1.13e-38 144
MS.gene051742.t1 MTR_5g015720 22.951 427 266 10 55 458 28 414 2.13e-26 110
MS.gene051742.t1 MTR_8g063490 45.714 105 46 1 298 402 4 97 7.87e-26 101
MS.gene051742.t1 MTR_1g116870 47.191 89 46 1 370 458 272 359 4.65e-20 91.7
MS.gene051742.t1 MTR_5g097420 41.414 99 55 1 360 458 19 114 5.03e-20 85.9
MS.gene051742.t1 MTR_8g085440 45.556 90 48 1 370 459 28 116 5.10e-20 85.9
MS.gene051742.t1 MTR_4g133735 43.529 85 48 0 374 458 28 112 5.21e-19 82.8
MS.gene051742.t1 MTR_4g133730 41.176 85 50 0 374 458 28 112 9.13e-19 82.4
MS.gene051742.t1 MTR_8g085390 46.067 89 47 1 374 462 30 117 2.00e-18 83.6
MS.gene051742.t1 MTR_8g471000 47.561 82 43 0 129 210 2 83 2.42e-18 80.1
MS.gene051742.t1 MTR_8g089400 39.216 102 61 1 360 460 22 123 5.96e-18 81.3
MS.gene051742.t1 MTR_8g089400 39.216 102 61 1 360 460 42 143 2.04e-17 80.5
MS.gene051742.t1 MTR_8g085420 44.318 88 48 1 370 457 28 114 9.06e-17 77.4
MS.gene051742.t1 MTR_4g079530 43.956 91 51 0 370 460 33 123 1.13e-16 76.6
MS.gene051742.t1 MTR_4g079530 43.956 91 51 0 370 460 33 123 2.49e-16 77.0
MS.gene051742.t1 MTR_4g036680 31.515 165 88 5 209 373 55 194 2.50e-16 78.2
MS.gene051742.t1 MTR_4g036775 33.835 133 73 3 241 373 77 194 8.84e-16 76.6
MS.gene051742.t1 MTR_5g091650 38.710 93 56 1 370 462 104 195 3.06e-15 76.3
MS.gene051742.t1 MTR_5g091650 39.560 91 54 1 371 461 105 194 3.48e-15 74.3
MS.gene051742.t1 MTR_3g082080 44.318 88 48 1 365 452 148 234 1.30e-14 73.9
MS.gene051742.t1 MTR_3g048280 38.095 105 63 2 352 455 89 192 2.38e-14 72.4
MS.gene051742.t1 MTR_2g049670 43.529 85 46 2 374 458 158 240 1.61e-13 72.0
MS.gene051742.t1 MTR_8g085400 43.210 81 42 2 372 452 31 107 3.86e-13 66.2
MS.gene051742.t1 MTR_7g111600 40.698 86 50 1 374 459 160 244 5.60e-13 69.3
MS.gene051742.t1 MTR_7g111600 40.698 86 50 1 374 459 160 244 5.98e-13 69.7
MS.gene051742.t1 MTR_7g111600 40.698 86 50 1 374 459 160 244 1.05e-12 69.3
MS.gene051742.t1 MTR_1g084820 40.000 85 49 2 370 454 416 498 5.97e-12 68.2
MS.gene051742.t1 MTR_1g084820 40.000 85 49 2 370 454 416 498 6.00e-12 68.2
MS.gene051742.t1 MTR_8g088120 38.667 75 45 1 386 460 60 133 2.79e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051742.t1 AT3G07320 66.290 442 147 1 22 463 21 460 0.0 629
MS.gene051742.t1 AT4G14080 52.818 479 209 2 1 463 1 478 0.0 540
MS.gene051742.t1 AT3G23770 56.054 446 192 2 21 463 32 476 0.0 540
MS.gene051742.t1 AT4G26830 41.379 464 248 7 6 460 5 453 5.19e-128 379
MS.gene051742.t1 AT4G26830 42.282 447 234 7 23 460 26 457 6.93e-127 376
MS.gene051742.t1 AT5G55180 42.760 442 234 7 27 460 28 458 6.47e-126 374
MS.gene051742.t1 AT5G55180 42.627 434 230 7 27 452 28 450 8.63e-121 361
MS.gene051742.t1 AT2G05790 39.421 449 253 7 27 460 26 470 3.95e-116 349
MS.gene051742.t1 AT5G56590 38.952 439 259 6 22 458 22 453 6.20e-108 329
MS.gene051742.t1 AT4G29360 38.998 459 254 6 21 458 32 485 5.02e-105 323
MS.gene051742.t1 AT4G29360 38.998 459 254 6 21 458 22 475 5.75e-105 322
MS.gene051742.t1 AT5G24318 38.043 460 274 7 1 458 5 455 1.70e-103 316
MS.gene051742.t1 AT5G24318 37.885 454 271 7 1 452 5 449 2.16e-99 305
MS.gene051742.t1 AT4G34480 37.069 464 271 7 1 459 1 448 3.39e-96 299
MS.gene051742.t1 AT2G16230 37.215 438 257 8 27 459 26 450 1.47e-94 295
MS.gene051742.t1 AT2G01630 36.009 436 262 7 27 459 24 445 1.03e-93 292
MS.gene051742.t1 AT3G55430 37.071 437 253 12 27 458 30 449 2.53e-91 285
MS.gene051742.t1 AT2G01630 35.664 429 259 7 27 452 24 438 1.64e-90 282
MS.gene051742.t1 AT3G13560 34.023 435 269 7 27 458 27 446 1.52e-88 279
MS.gene051742.t1 AT3G13560 34.023 435 269 7 27 458 27 446 1.52e-88 279
MS.gene051742.t1 AT3G13560 34.023 435 269 7 27 458 27 446 1.52e-88 279
MS.gene051742.t1 AT3G13560 34.023 435 269 7 27 458 27 446 1.52e-88 279
MS.gene051742.t1 AT3G13560 34.023 435 269 7 27 458 27 446 1.52e-88 279
MS.gene051742.t1 AT1G66250 34.023 435 269 8 27 458 33 452 3.98e-88 278
MS.gene051742.t1 AT1G11820 33.716 436 272 7 27 459 45 466 7.65e-88 278
MS.gene051742.t1 AT3G15800 41.411 326 185 5 27 350 44 365 1.88e-86 270
MS.gene051742.t1 AT4G18340 39.665 358 205 7 3 356 13 363 3.56e-85 266
MS.gene051742.t1 AT4G18340 39.665 358 205 7 3 356 13 363 7.13e-85 266
MS.gene051742.t1 AT1G11820 33.100 429 270 7 27 452 45 459 1.68e-83 265
MS.gene051742.t1 AT2G27500 38.602 329 197 4 27 354 30 354 3.99e-83 261
MS.gene051742.t1 AT2G27500 38.602 329 197 4 27 354 30 354 1.34e-82 260
MS.gene051742.t1 AT1G30080 40.407 344 199 5 4 346 14 352 2.14e-82 259
MS.gene051742.t1 AT1G30080 40.407 344 199 5 4 346 14 352 4.51e-82 259
MS.gene051742.t1 AT5G24318 40.286 350 199 6 1 348 5 346 1.70e-81 257
MS.gene051742.t1 AT1G32860 39.875 321 189 4 27 346 30 347 5.33e-79 252
MS.gene051742.t1 AT5G42720 39.601 351 202 6 4 352 8 350 9.71e-79 252
MS.gene051742.t1 AT2G39640 35.000 460 267 15 4 459 12 443 5.04e-76 248
MS.gene051742.t1 AT2G26600 35.714 336 211 4 21 355 29 360 6.43e-76 243
MS.gene051742.t1 AT4G34480 38.095 357 216 4 1 356 1 353 5.37e-75 239
MS.gene051742.t1 AT3G57270 38.739 333 190 7 18 348 19 339 1.62e-74 238
MS.gene051742.t1 AT5G42100 39.024 328 193 6 24 348 25 348 2.29e-74 240
MS.gene051742.t1 AT5G42100 39.024 328 193 6 24 348 25 348 3.44e-74 239
MS.gene051742.t1 AT3G61810 37.870 338 194 5 17 349 46 372 3.90e-73 235
MS.gene051742.t1 AT5G24318 39.677 310 179 4 149 458 15 316 2.14e-71 229
MS.gene051742.t1 AT2G01630 35.000 380 230 7 27 403 24 389 5.58e-71 230
MS.gene051742.t1 AT4G34480 38.462 351 195 7 114 459 3 337 2.89e-70 228
MS.gene051742.t1 AT4G16260 37.092 337 195 10 5 339 4 325 1.15e-67 220
MS.gene051742.t1 AT2G27500 38.351 279 167 4 77 354 2 276 1.79e-65 213
MS.gene051742.t1 AT3G46570 37.615 327 193 7 25 348 26 344 1.73e-64 212
MS.gene051742.t1 AT5G20340 36.872 358 200 11 3 346 8 353 1.11e-63 210
MS.gene051742.t1 AT5G20330 37.353 340 197 9 3 338 8 335 1.61e-63 209
MS.gene051742.t1 AT1G33220 37.048 332 193 9 3 330 8 327 6.59e-63 207
MS.gene051742.t1 AT5G20390 37.353 340 195 10 3 338 9 334 1.33e-62 207
MS.gene051742.t1 AT4G16260 36.893 309 179 9 33 339 2 296 2.95e-61 202
MS.gene051742.t1 AT3G24330 30.819 464 296 16 5 459 18 465 7.73e-61 207
MS.gene051742.t1 AT2G26600 37.037 270 165 4 87 355 1 266 2.47e-60 199
MS.gene051742.t1 AT3G57260 33.237 346 213 8 4 349 12 339 3.30e-60 200
MS.gene051742.t1 AT1G11820 33.028 327 212 5 27 350 45 367 3.74e-60 202
MS.gene051742.t1 AT3G57260 33.526 346 212 8 4 349 28 355 5.44e-60 200
MS.gene051742.t1 AT1G77780 33.721 344 214 8 5 346 1 332 3.10e-58 196
MS.gene051742.t1 AT3G57240 33.544 316 191 8 25 339 34 331 1.22e-54 186
MS.gene051742.t1 AT4G31140 28.959 442 283 17 27 458 28 448 4.54e-54 188
MS.gene051742.t1 AT5G20870 30.591 474 289 21 3 459 10 460 1.40e-51 182
MS.gene051742.t1 AT4G17180 30.201 447 281 16 19 458 18 440 3.41e-49 175
MS.gene051742.t1 AT5G18220 29.638 469 291 20 5 459 13 456 9.64e-49 174
MS.gene051742.t1 AT1G77790 31.562 320 210 5 27 346 31 341 2.80e-48 169
MS.gene051742.t1 AT3G55780 32.063 315 200 8 40 349 49 354 2.86e-48 170
MS.gene051742.t1 AT5G20560 35.191 341 204 10 3 338 8 336 4.62e-47 166
MS.gene051742.t1 AT5G58090 28.700 446 291 16 23 459 19 446 1.29e-46 168
MS.gene051742.t1 AT5G64790 27.477 444 291 15 27 459 29 452 1.50e-46 168
MS.gene051742.t1 AT3G04010 28.078 463 297 19 11 459 18 458 3.60e-46 167
MS.gene051742.t1 AT5G58480 27.191 445 284 16 27 458 27 444 1.42e-42 157
MS.gene051742.t1 AT2G19440 28.217 443 289 19 27 459 22 445 7.19e-42 155
MS.gene051742.t1 AT2G19440 28.217 443 289 19 27 459 22 445 7.19e-42 155
MS.gene051742.t1 AT1G64760 27.703 444 290 20 27 459 26 449 4.39e-40 150
MS.gene051742.t1 AT1G64760 27.703 444 290 20 27 459 26 449 4.39e-40 150
MS.gene051742.t1 AT5G67460 42.991 107 55 2 358 458 271 377 1.36e-21 96.7
MS.gene051742.t1 AT5G67460 42.574 101 52 2 358 452 271 371 1.29e-18 87.8
MS.gene051742.t1 AT5G35740 38.614 101 60 2 359 458 16 115 3.57e-18 80.9
MS.gene051742.t1 AT4G13600 47.126 87 45 1 373 459 60 145 5.57e-17 80.5
MS.gene051742.t1 AT4G05430 35.644 101 64 1 359 458 7 107 6.67e-17 77.8
MS.gene051742.t1 AT2G04910 39.773 88 53 0 374 461 15 102 9.77e-17 76.3
MS.gene051742.t1 AT2G30933 43.820 89 49 1 374 462 82 169 2.74e-16 78.6
MS.gene051742.t1 AT1G79480 41.176 85 49 1 374 458 311 394 8.24e-16 79.3
MS.gene051742.t1 AT1G79480 41.176 85 49 1 374 458 310 393 8.42e-16 79.3
MS.gene051742.t1 AT5G61130 39.560 91 54 1 369 459 16 105 1.13e-15 75.9
MS.gene051742.t1 AT1G66870 35.227 88 57 0 371 458 50 137 1.96e-15 73.6
MS.gene051742.t1 AT4G05430 34.951 103 66 1 359 460 32 134 2.01e-15 74.3
MS.gene051742.t1 AT4G09462 36.842 95 59 1 366 460 21 114 3.20e-15 72.0
MS.gene051742.t1 AT1G66870 35.227 88 57 0 371 458 23 110 3.23e-15 72.0
MS.gene051742.t1 AT1G29380 41.176 85 49 1 374 458 148 231 2.06e-14 74.3
MS.gene051742.t1 AT1G29380 41.379 87 50 1 374 460 148 233 2.28e-14 73.6
MS.gene051742.t1 AT4G09467 37.079 89 55 1 372 460 29 116 2.90e-14 69.7
MS.gene051742.t1 AT4G09464 37.079 89 55 1 372 460 29 116 2.90e-14 69.7
MS.gene051742.t1 AT4G09465 37.079 89 55 1 372 460 29 116 2.93e-14 69.7
MS.gene051742.t1 AT1G18650 39.130 92 55 1 369 460 16 106 3.34e-14 71.2
MS.gene051742.t1 AT5G63250 33.333 108 66 2 355 460 27 130 3.60e-14 69.7
MS.gene051742.t1 AT3G58100 37.079 89 56 0 372 460 39 127 4.10e-14 70.9
MS.gene051742.t1 AT2G29735 37.363 91 54 2 370 458 27 116 4.93e-14 68.9
MS.gene051742.t1 AT3G58100 37.079 89 56 0 372 460 115 203 7.13e-14 72.0
MS.gene051742.t1 AT1G18650 39.130 92 55 1 369 460 16 106 1.52e-13 67.8
MS.gene051742.t1 AT4G05430 34.737 95 61 1 359 452 32 126 2.09e-13 67.4
MS.gene051742.t1 AT2G04910 39.241 79 48 0 374 452 15 93 5.13e-13 66.2
MS.gene051742.t1 AT5G63225 35.294 85 54 1 374 458 25 108 6.93e-13 65.5
MS.gene051742.t1 AT1G66855 30.682 88 61 0 371 458 23 110 9.33e-13 65.1
MS.gene051742.t1 AT1G66852 35.227 88 56 1 371 458 23 109 9.93e-13 65.1
MS.gene051742.t1 AT4G09466 34.831 89 57 1 372 460 29 116 1.17e-12 65.1
MS.gene051742.t1 AT1G09460 38.947 95 55 2 364 458 127 218 3.63e-12 67.8
MS.gene051742.t1 AT2G30933 41.772 79 45 1 374 452 82 159 4.98e-12 64.3
MS.gene051742.t1 AT2G30933 41.772 79 45 1 374 452 82 159 4.98e-12 64.3
MS.gene051742.t1 AT5G08000 39.326 89 53 1 371 459 37 124 8.21e-12 65.1
MS.gene051742.t1 AT1G29380 39.241 79 47 1 374 452 148 225 1.37e-11 64.7
MS.gene051742.t1 AT1G29380 39.241 79 47 1 374 452 148 225 1.37e-11 64.7
MS.gene051742.t1 AT4G16165 34.831 89 58 0 370 458 22 110 1.39e-11 61.6
MS.gene051742.t1 AT5G63230 32.941 85 56 1 374 458 26 109 2.31e-11 61.2
MS.gene051742.t1 AT4G09090 33.333 87 57 1 374 460 31 116 3.14e-11 60.8
MS.gene051742.t1 AT5G53600 31.034 87 58 1 372 458 27 111 5.71e-11 60.1
MS.gene051742.t1 AT5G08000 39.535 86 51 1 374 459 21 105 5.72e-11 62.0
MS.gene051742.t1 AT5G63240 33.333 90 58 1 373 460 39 128 6.19e-11 60.5

Find 127 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGGTACGGAGCGGCATTT+TGG 0.169409 7.3:-50431267 MS.gene051742:CDS
CGACCCGGTTAATGTTAATT+TGG 0.198547 7.3:-50431622 MS.gene051742:CDS
GGAGGAACTTGTTACTTTAA+TGG 0.203799 7.3:-50430943 MS.gene051742:CDS
GTTTATGACATTGATCTTTC+GGG 0.227881 7.3:-50431219 MS.gene051742:CDS
CAACGAGGAGGTAACGGATT+AGG 0.259111 7.3:+50431919 None:intergenic
ATTAGGGTTTGTGGGTAATA+AGG 0.261206 7.3:+50431936 None:intergenic
CACCAAATCTTCCCTTTATA+CGG 0.266249 7.3:+50431144 None:intergenic
GGTTTATGACATTGATCTTT+CGG 0.279871 7.3:-50431220 MS.gene051742:CDS
TAATCCAAATTAACATTAAC+CGG 0.304337 7.3:+50431618 None:intergenic
TTTAAGGTTGTTAGGATTTG+TGG 0.304363 7.3:+50432062 None:intergenic
AATGGAGAAACTTGGGTTTC+CGG 0.309222 7.3:-50431496 MS.gene051742:CDS
GAGAATAATGAGCCGTATAA+AGG 0.324004 7.3:-50431156 MS.gene051742:CDS
ACGGTTAAAGATCCGGGTTC+GGG 0.326064 7.3:-50431570 MS.gene051742:CDS
AACGAGGAGGTAACGGATTA+GGG 0.326663 7.3:+50431920 None:intergenic
TATTGTATCCGAACGGGTCT+AGG 0.329429 7.3:-50431242 MS.gene051742:CDS
GAGGAACTTGTTACTTTAAT+GGG 0.332834 7.3:-50430942 MS.gene051742:CDS
TAAAGATCCGGGTTCGGGTT+TGG 0.346500 7.3:-50431565 MS.gene051742:CDS
CGGATATTTATCGCGGAAAC+GGG 0.349889 7.3:-50431468 MS.gene051742:CDS
TTAAGCCCGAATCGGTGTTT+TGG 0.356169 7.3:-50431014 MS.gene051742:CDS
GCTATGCGTTTAGTTCCTAT+TGG 0.358375 7.3:-50430984 MS.gene051742:CDS
TCCATTGGTCGGAGAGGGTT+TGG 0.366090 7.3:+50431976 None:intergenic
CTTCTTAAACTGTGCCCAAT+AGG 0.366956 7.3:+50430969 None:intergenic
CTATGCGTTTAGTTCCTATT+GGG 0.381942 7.3:-50430983 MS.gene051742:CDS
TGTTGGGACACCGGCTCGAC+CGG 0.385430 7.3:-50431346 MS.gene051742:CDS
GCGGAAACGGGTTGGCCTAA+TGG 0.386035 7.3:-50431456 MS.gene051742:CDS
TTGGGAGCATGATTGAGATT+TGG 0.386715 7.3:+50432027 None:intergenic
AGTTGACCGTAGCAGATTCC+TGG 0.387463 7.3:+50432170 None:intergenic
TTAAGGTTGTTAGGATTTGT+GGG 0.390167 7.3:+50432063 None:intergenic
GGGAGTAATTTGACTGCGTT+AGG 0.392088 7.3:-50431108 MS.gene051742:CDS
AGATGAAGCCACGTGGAGTT+TGG 0.393557 7.3:+50431873 None:intergenic
GCATGCCAAAACACCGATTC+GGG 0.393621 7.3:+50431009 None:intergenic
AGCCGTATAAAGGGAAGATT+TGG 0.394135 7.3:-50431146 MS.gene051742:CDS
AACTTGGGTTTCCGGATGTT+CGG 0.396533 7.3:-50431488 MS.gene051742:CDS
GTTTAATGAGAATATTAAAC+CGG 0.401130 7.3:-50431292 MS.gene051742:CDS
CCAAAATGCCGCTCCGTACC+TGG 0.402042 7.3:+50431267 None:intergenic
ATGCTTGCTCGCAGGGGAAC+CGG 0.402137 7.3:-50431071 MS.gene051742:CDS
GGTGGTGATGTTGATCAAAT+TGG 0.406359 7.3:-50431435 MS.gene051742:CDS
TTCTCTGGCGGAGGAAGTGC+TGG 0.408819 7.3:+50431174 None:intergenic
TACGGTTAAAGATCCGGGTT+CGG 0.410510 7.3:-50431571 MS.gene051742:CDS
TCGGATATTTATCGCGGAAA+CGG 0.419442 7.3:-50431469 MS.gene051742:CDS
TAATGTTACGGTTAAAGATC+CGG 0.423841 7.3:-50431577 MS.gene051742:CDS
ATGTTTGTGATGAGTTCGTT+TGG 0.429565 7.3:+50432008 None:intergenic
TACGAATTTATTTGATCAGA+TGG 0.440268 7.3:-50431538 MS.gene051742:CDS
AGCATGCCAAAACACCGATT+CGG 0.449585 7.3:+50431008 None:intergenic
AGTTGGTACTTCTTCTGCTA+TGG 0.450725 7.3:-50431790 MS.gene051742:CDS
TTGGGTTATTGTATCCGAAC+GGG 0.453332 7.3:-50431248 MS.gene051742:CDS
TTACGAAACGCAGCGTTTGA+AGG 0.455167 7.3:+50431744 None:intergenic
TGAATAGAATGGAGAAAAGA+AGG 0.457163 7.3:+50432361 None:intergenic
TGGGTAATAAGGTAGAATGT+TGG 0.457811 7.3:+50431947 None:intergenic
AGAATAATGAGCCGTATAAA+GGG 0.458577 7.3:-50431155 MS.gene051742:CDS
TTATACGGCTCATTATTCTC+TGG 0.466583 7.3:+50431159 None:intergenic
CGTTGCCAACGAGGAGGTAA+CGG 0.468252 7.3:+50431913 None:intergenic
TGTTTGTGATGAGTTCGTTT+GGG 0.471998 7.3:+50432009 None:intergenic
CGAGCCGGTGTCCCAACAAC+CGG 0.475288 7.3:+50431351 None:intergenic
TGGGCACAGTTTAAGAAGAC+TGG 0.479411 7.3:-50430964 MS.gene051742:CDS
GAATGTTGGATTTGATCCAT+TGG 0.484368 7.3:+50431961 None:intergenic
TTCCAAGTGTGACACTTTGA+AGG 0.487564 7.3:-50430418 None:intergenic
CTCCTTCAAAGTGTCACACT+TGG 0.488468 7.3:+50430416 None:intergenic
GTTTAGAGAGAGTAATGTTA+CGG 0.488551 7.3:-50431589 MS.gene051742:CDS
GTTTACTTCACAGATAGCTC+AGG 0.492016 7.3:-50432206 MS.gene051742:intron
TGATCAACATCACCACCATT+AGG 0.494772 7.3:+50431441 None:intergenic
AAGTTATTAAGCCCATGCTT+AGG 0.501182 7.3:-50431707 MS.gene051742:CDS
GGGGAACCGGACTTGTGATC+CGG 0.503868 7.3:-50431058 MS.gene051742:CDS
TGATATGCTGTTGAATAGAA+TGG 0.507817 7.3:+50432350 None:intergenic
CGAAACGCAGCGTTTGAAGG+TGG 0.507919 7.3:+50431747 None:intergenic
TTTGATCCATTGGTCGGAGA+GGG 0.508250 7.3:+50431971 None:intergenic
AGTGCTGGAAACTCTGAATC+CGG 0.508994 7.3:+50431189 None:intergenic
ATTTGGTGTGTGGCGGTGCG+TGG 0.510143 7.3:-50431129 MS.gene051742:CDS
GAGAATATTAAACCGGGTCC+AGG 0.511434 7.3:-50431285 MS.gene051742:CDS
GGAGTAATTTGACTGCGTTA+GGG 0.516570 7.3:-50431107 MS.gene051742:CDS
GCGATAAATATCCGAACATC+CGG 0.517870 7.3:+50431477 None:intergenic
TTGACATATGCTTGCTCGCA+GGG 0.519727 7.3:-50431078 MS.gene051742:CDS
AGGTAACGGATTAGGGTTTG+TGG 0.521382 7.3:+50431927 None:intergenic
AATGTTACGGTTAAAGATCC+GGG 0.527447 7.3:-50431576 MS.gene051742:CDS
ATTTGATCAGATGGTGGATG+CGG 0.528077 7.3:-50431529 MS.gene051742:CDS
GTTGGGACACCGGCTCGACC+GGG 0.530784 7.3:-50431345 MS.gene051742:CDS
GGAATCTGCTACGGTCAACT+AGG 0.534218 7.3:-50432167 MS.gene051742:CDS
AGAATCAAAAGAATCAAAGT+TGG 0.535473 7.3:-50431807 MS.gene051742:CDS
ATTGTATCCGAACGGGTCTA+GGG 0.535543 7.3:-50431241 MS.gene051742:CDS
AGAATCAAACCCGGTCGAGC+CGG 0.535734 7.3:+50431336 None:intergenic
TTTGGGTTATTGTATCCGAA+CGG 0.537876 7.3:-50431249 MS.gene051742:CDS
GGTAACGGATTAGGGTTTGT+GGG 0.538137 7.3:+50431928 None:intergenic
TGTTTGATTCTACGCATCGC+AGG 0.542098 7.3:+50431846 None:intergenic
TGCCGCTCCGTACCTGGACC+CGG 0.546698 7.3:+50431273 None:intergenic
TATTTATCGCGGAAACGGGT+TGG 0.547640 7.3:-50431464 MS.gene051742:CDS
TATTAAACCGGGTCCAGGTA+CGG 0.551795 7.3:-50431280 MS.gene051742:CDS
TCATAAACCCTAGACCCGTT+CGG 0.556211 7.3:+50431234 None:intergenic
ACCAAACCCTCTCCGACCAA+TGG 0.556784 7.3:-50431977 MS.gene051742:CDS
GTTGGATTTGATCCATTGGT+CGG 0.560158 7.3:+50431965 None:intergenic
ACTTGTGATCCGGTTCAACC+CGG 0.561213 7.3:-50431048 MS.gene051742:CDS
TTTGGTGTGTGGCGGTGCGT+GGG 0.564836 7.3:-50431128 MS.gene051742:CDS
AAAACCGGTTGTTGGGACAC+CGG 0.566975 7.3:-50431355 MS.gene051742:CDS
GTTTGATTCTACGCATCGCA+GGG 0.568728 7.3:+50431847 None:intergenic
GGCTCATTATTCTCTGGCGG+AGG 0.572943 7.3:+50431165 None:intergenic
GTTGAACCGGATCACAAGTC+CGG 0.573766 7.3:+50431052 None:intergenic
GTATAAACCAAACCCGAACC+CGG 0.574382 7.3:+50431558 None:intergenic
GAATTTATTTGATCAGATGG+TGG 0.583307 7.3:-50431535 MS.gene051742:CDS
TACGGCTCATTATTCTCTGG+CGG 0.593030 7.3:+50431162 None:intergenic
TGATCTTTCGGGGAAGACAC+CGG 0.594199 7.3:-50431208 MS.gene051742:CDS
CTAATCCGTTACCTCCTCGT+TGG 0.602232 7.3:-50431918 MS.gene051742:CDS
GAGTAATTTGACTGCGTTAG+GGG 0.604286 7.3:-50431106 MS.gene051742:CDS
CTTGTGATCCGGTTCAACCC+GGG 0.606763 7.3:-50431047 MS.gene051742:CDS
TAATTTGACTGCGTTAGGGG+AGG 0.607558 7.3:-50431103 MS.gene051742:CDS
TCACAACCAGGAATCTGCTA+CGG 0.615741 7.3:-50432176 MS.gene051742:CDS
ATTTGATCCATTGGTCGGAG+AGG 0.616370 7.3:+50431970 None:intergenic
GTTGACATATGCTTGCTCGC+AGG 0.621005 7.3:-50431079 MS.gene051742:CDS
CAAATTAACATTAACCGGGT+CGG 0.622515 7.3:+50431623 None:intergenic
TTTAATGAGAATATTAAACC+GGG 0.624692 7.3:-50431291 MS.gene051742:CDS
TCAGGCTTCTCATCACAACC+AGG 0.625944 7.3:-50432188 MS.gene051742:CDS
TAAAGGGAAGATTTGGTGTG+TGG 0.635044 7.3:-50431139 MS.gene051742:CDS
GAAACGGGTTGGCCTAATGG+TGG 0.635140 7.3:-50431453 MS.gene051742:CDS
GCTTGCTACTCAAACTGCAA+AGG 0.636317 7.3:-50430920 MS.gene051742:CDS
AAGCCACGTGGAGTTTGGTG+TGG 0.644687 7.3:+50431878 None:intergenic
TTAACCGGGTCGGAGCTCCA+AGG 0.655245 7.3:+50431633 None:intergenic
TGCGTTTCGTAAAGATATAG+CGG 0.657744 7.3:-50431733 MS.gene051742:CDS
TGATTTCGTTGCCAACGAGG+AGG 0.662105 7.3:+50431907 None:intergenic
AATCCAAATTAACATTAACC+GGG 0.666875 7.3:+50431619 None:intergenic
TGACATATGCTTGCTCGCAG+GGG 0.669740 7.3:-50431077 MS.gene051742:CDS
GGATGTTCGGATATTTATCG+CGG 0.670356 7.3:-50431475 MS.gene051742:CDS
AACCGGGTCCAGGTACGGAG+CGG 0.677668 7.3:-50431275 MS.gene051742:CDS
TTTATGACATTGATCTTTCG+GGG 0.677934 7.3:-50431218 MS.gene051742:CDS
CATCCACACCAAACTCCACG+TGG 0.678852 7.3:-50431881 MS.gene051742:CDS
GCACAGTTTAAGAAGACTGG+AGG 0.681953 7.3:-50430961 MS.gene051742:CDS
AGATGATTTCGTTGCCAACG+AGG 0.712852 7.3:+50431904 None:intergenic
AGGGAAGATTTGGTGTGTGG+CGG 0.713466 7.3:-50431136 MS.gene051742:CDS
AAACTCGGAAGAATCAAACC+CGG 0.738088 7.3:+50431327 None:intergenic
AGGGACGAGATGAAGCCACG+TGG 0.766058 7.3:+50431866 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAACGTTAAGTAA+TGG + chr7.3:50432321-50432340 None:intergenic 15.0%
!! AATAAAAAAATGTACTTACT+TGG + chr7.3:50431907-50431926 None:intergenic 15.0%
!! TAAAAAAGTTATGAAAAAAC+CGG - chr7.3:50431429-50431448 MS.gene051742:CDS 15.0%
!!! TTTTCATTTTGATATAAGAA+AGG - chr7.3:50432026-50432045 MS.gene051742:CDS 15.0%
!! AAAAGAAAAAAGATTTAGTC+CGG + chr7.3:50431126-50431145 None:intergenic 20.0%
!! AACAAAGCAAATAAAAAACT+CGG + chr7.3:50431490-50431509 None:intergenic 20.0%
!! AATCAAGTACTTCAATTTAA+TGG + chr7.3:50432178-50432197 None:intergenic 20.0%
!! CAATTTAATGGTTATACATT+TGG + chr7.3:50432166-50432185 None:intergenic 20.0%
!! GTAGTTAAGTTTAAATTAAC+TGG + chr7.3:50432219-50432238 None:intergenic 20.0%
!! GTTTAATGAGAATATTAAAC+CGG - chr7.3:50431507-50431526 MS.gene051742:CDS 20.0%
!! TAATCCAAATTAACATTAAC+CGG + chr7.3:50431184-50431203 None:intergenic 20.0%
!! TTTAATGAGAATATTAAACC+GGG - chr7.3:50431508-50431527 MS.gene051742:CDS 20.0%
!!! AGTAATGGAAAAGTATAATA+AGG + chr7.3:50432306-50432325 None:intergenic 20.0%
!!! GACTAAATCTTTTTTCTTTT+TGG - chr7.3:50431126-50431145 MS.gene051742:CDS 20.0%
!!! GTTTTACAACAAAAAATTGT+TGG - chr7.3:50432052-50432071 MS.gene051742:CDS 20.0%
! AATCATAACTCACAATTAGA+GGG + chr7.3:50431958-50431977 None:intergenic 25.0%
! AATCCAAATTAACATTAACC+GGG + chr7.3:50431183-50431202 None:intergenic 25.0%
! AGAATCAAAAGAATCAAAGT+TGG - chr7.3:50430992-50431011 MS.gene051742:CDS 25.0%
! TAATCATAACTCACAATTAG+AGG + chr7.3:50431959-50431978 None:intergenic 25.0%
! TACGAATTTATTTGATCAGA+TGG - chr7.3:50431261-50431280 MS.gene051742:CDS 25.0%
!!! AAGTACTTGATTTGTTAACA+AGG - chr7.3:50432186-50432205 MS.gene051742:CDS 25.0%
!!! TGCTTTTAAGGATTTGATTA+GGG + chr7.3:50430690-50430709 None:intergenic 25.0%
!!! TTGCTTTTAAGGATTTGATT+AGG + chr7.3:50430691-50430710 None:intergenic 25.0%
!!! TTGGATGTTTGTGTTTTTTA+AGG + chr7.3:50430756-50430775 None:intergenic 25.0%
!!! TTGTGTTTTTTAAGGTTGTT+AGG + chr7.3:50430748-50430767 None:intergenic 25.0%
AGAATAATGAGCCGTATAAA+GGG - chr7.3:50431644-50431663 MS.gene051742:CDS 30.0%
GAATTTATTTGATCAGATGG+TGG - chr7.3:50431264-50431283 MS.gene051742:CDS 30.0%
GGTTTATGACATTGATCTTT+CGG - chr7.3:50431579-50431598 MS.gene051742:CDS 30.0%
GTAAGTAACAAAACACTTCT+TGG - chr7.3:50430473-50430492 MS.gene051742:intron 30.0%
GTTTAGAGAGAGTAATGTTA+CGG - chr7.3:50431210-50431229 MS.gene051742:CDS 30.0%
GTTTATGACATTGATCTTTC+GGG - chr7.3:50431580-50431599 MS.gene051742:CDS 30.0%
TAATGTTACGGTTAAAGATC+CGG - chr7.3:50431222-50431241 MS.gene051742:CDS 30.0%
TGAATAGAATGGAGAAAAGA+AGG + chr7.3:50430441-50430460 None:intergenic 30.0%
TGATATGCTGTTGAATAGAA+TGG + chr7.3:50430452-50430471 None:intergenic 30.0%
TTAAGGTTGTTAGGATTTGT+GGG + chr7.3:50430739-50430758 None:intergenic 30.0%
TTATGAAAAAACCGGTTGTT+GGG - chr7.3:50431437-50431456 MS.gene051742:CDS 30.0%
TTTATGACATTGATCTTTCG+GGG - chr7.3:50431581-50431600 MS.gene051742:CDS 30.0%
! ATTTTGCAATGGAGAAACTT+GGG - chr7.3:50431296-50431315 MS.gene051742:CDS 30.0%
! TATTTTGCAATGGAGAAACT+TGG - chr7.3:50431295-50431314 MS.gene051742:CDS 30.0%
! TTTAAGGTTGTTAGGATTTG+TGG + chr7.3:50430740-50430759 None:intergenic 30.0%
!! ATTAGGGTTAGTGATTTTGA+GGG + chr7.3:50430674-50430693 None:intergenic 30.0%
!! GAGGAACTTGTTACTTTAAT+GGG - chr7.3:50431857-50431876 MS.gene051742:CDS 30.0%
!! TTTGATGCGTTTTGCTTTTA+AGG + chr7.3:50430702-50430721 None:intergenic 30.0%
!!! ATCTTTTTTCGAACATGTGT+AGG - chr7.3:50432341-50432360 MS.gene051742:intron 30.0%
!!! ATGTTTATCCGTTTTTTCCT+TGG - chr7.3:50431149-50431168 MS.gene051742:CDS 30.0%
AAGTTATTAAGCCCATGCTT+AGG - chr7.3:50431092-50431111 MS.gene051742:CDS 35.0%
AATGTTACGGTTAAAGATCC+GGG - chr7.3:50431223-50431242 MS.gene051742:CDS 35.0%
ATGACATTTAACAGCCATTG+TGG + chr7.3:50432099-50432118 None:intergenic 35.0%
ATGTTTGTGATGAGTTCGTT+TGG + chr7.3:50430794-50430813 None:intergenic 35.0%
ATTAGGGTTTGTGGGTAATA+AGG + chr7.3:50430866-50430885 None:intergenic 35.0%
CAAATTAACATTAACCGGGT+CGG + chr7.3:50431179-50431198 None:intergenic 35.0%
CACCAAATCTTCCCTTTATA+CGG + chr7.3:50431658-50431677 None:intergenic 35.0%
CATTCTCATCTCTTGTGATT+TGG - chr7.3:50430502-50430521 MS.gene051742:intron 35.0%
CGGTTTAAAAACCTAAGCAT+GGG + chr7.3:50431106-50431125 None:intergenic 35.0%
GAATGTTGGATTTGATCCAT+TGG + chr7.3:50430841-50430860 None:intergenic 35.0%
GAGAATAATGAGCCGTATAA+AGG - chr7.3:50431643-50431662 MS.gene051742:CDS 35.0%
GTTATGAAAAAACCGGTTGT+TGG - chr7.3:50431436-50431455 MS.gene051742:CDS 35.0%
TCTTAGTATTGTTCCCACAA+TGG - chr7.3:50432082-50432101 MS.gene051742:CDS 35.0%
TGACATTTAACAGCCATTGT+GGG + chr7.3:50432098-50432117 None:intergenic 35.0%
TGCGTTTCGTAAAGATATAG+CGG - chr7.3:50431066-50431085 MS.gene051742:CDS 35.0%
TGGGTAATAAGGTAGAATGT+TGG + chr7.3:50430855-50430874 None:intergenic 35.0%
TGTTTGTGATGAGTTCGTTT+GGG + chr7.3:50430793-50430812 None:intergenic 35.0%
TTATACGGCTCATTATTCTC+TGG + chr7.3:50431643-50431662 None:intergenic 35.0%
TTTCGAACATGTGTAGGTTA+TGG - chr7.3:50432347-50432366 MS.gene051742:intron 35.0%
! CCATGCTTAGGTTTTTAAAC+CGG - chr7.3:50431104-50431123 MS.gene051742:CDS 35.0%
! CTATGCGTTTAGTTCCTATT+GGG - chr7.3:50431816-50431835 MS.gene051742:CDS 35.0%
! TTTGGGTTATTGTATCCGAA+CGG - chr7.3:50431550-50431569 MS.gene051742:CDS 35.0%
!! AAAGTGTTTTAAGCCCGAAT+CGG - chr7.3:50431777-50431796 MS.gene051742:CDS 35.0%
!! GATTAGGGTTAGTGATTTTG+AGG + chr7.3:50430675-50430694 None:intergenic 35.0%
!! GGAGGAACTTGTTACTTTAA+TGG - chr7.3:50431856-50431875 MS.gene051742:CDS 35.0%
!! GTTAGTGATTTTGAGGGTTT+TGG + chr7.3:50430668-50430687 None:intergenic 35.0%
AAACTCGGAAGAATCAAACC+CGG + chr7.3:50431475-50431494 None:intergenic 40.0%
AATGGAGAAACTTGGGTTTC+CGG - chr7.3:50431303-50431322 MS.gene051742:CDS 40.0%
AGCCGTATAAAGGGAAGATT+TGG - chr7.3:50431653-50431672 MS.gene051742:CDS 40.0%
CCGGTTTAAAAACCTAAGCA+TGG + chr7.3:50431107-50431126 None:intergenic 40.0%
CGACCCGGTTAATGTTAATT+TGG - chr7.3:50431177-50431196 MS.gene051742:CDS 40.0%
CTTCTTAAACTGTGCCCAAT+AGG + chr7.3:50431833-50431852 None:intergenic 40.0%
GAGTAATTTGACTGCGTTAG+GGG - chr7.3:50431693-50431712 MS.gene051742:CDS 40.0%
GCGATAAATATCCGAACATC+CGG + chr7.3:50431325-50431344 None:intergenic 40.0%
GGAGTAATTTGACTGCGTTA+GGG - chr7.3:50431692-50431711 MS.gene051742:CDS 40.0%
GGATGTTCGGATATTTATCG+CGG - chr7.3:50431324-50431343 MS.gene051742:CDS 40.0%
GTTGGATTTGATCCATTGGT+CGG + chr7.3:50430837-50430856 None:intergenic 40.0%
GTTTACTTCACAGATAGCTC+AGG - chr7.3:50430593-50430612 MS.gene051742:intron 40.0%
TCGGATATTTATCGCGGAAA+CGG - chr7.3:50431330-50431349 MS.gene051742:CDS 40.0%
TGATCAACATCACCACCATT+AGG + chr7.3:50431361-50431380 None:intergenic 40.0%
TTGGGTTATTGTATCCGAAC+GGG - chr7.3:50431551-50431570 MS.gene051742:CDS 40.0%
! AGTTGGTACTTCTTCTGCTA+TGG - chr7.3:50431009-50431028 MS.gene051742:CDS 40.0%
! GCTATGCGTTTAGTTCCTAT+TGG - chr7.3:50431815-50431834 MS.gene051742:CDS 40.0%
! GGTGGTGATGTTGATCAAAT+TGG - chr7.3:50431364-50431383 MS.gene051742:CDS 40.0%
! TTGGGAGCATGATTGAGATT+TGG + chr7.3:50430775-50430794 None:intergenic 40.0%
!! ATTTGATCAGATGGTGGATG+CGG - chr7.3:50431270-50431289 MS.gene051742:CDS 40.0%
!! GTGATTTTGAGGGTTTTGGT+AGG + chr7.3:50430664-50430683 None:intergenic 40.0%
!! TAAAGGGAAGATTTGGTGTG+TGG - chr7.3:50431660-50431679 MS.gene051742:CDS 40.0%
!!! GGATGCGGTTTATTTTGCAA+TGG - chr7.3:50431285-50431304 MS.gene051742:CDS 40.0%
!!! GGCTTAAAACACTTTTTCCC+GGG + chr7.3:50431772-50431791 None:intergenic 40.0%
!!! GGGCTTAAAACACTTTTTCC+CGG + chr7.3:50431773-50431792 None:intergenic 40.0%
AACTTGGGTTTCCGGATGTT+CGG - chr7.3:50431311-50431330 MS.gene051742:CDS 45.0%
AGATGATTTCGTTGCCAACG+AGG + chr7.3:50430898-50430917 None:intergenic 45.0%
ATTGTATCCGAACGGGTCTA+GGG - chr7.3:50431558-50431577 MS.gene051742:CDS 45.0%
ATTTGATCCATTGGTCGGAG+AGG + chr7.3:50430832-50430851 None:intergenic 45.0%
CGGATATTTATCGCGGAAAC+GGG - chr7.3:50431331-50431350 MS.gene051742:CDS 45.0%
GAGAATATTAAACCGGGTCC+AGG - chr7.3:50431514-50431533 MS.gene051742:CDS 45.0%
GCACAGTTTAAGAAGACTGG+AGG - chr7.3:50431838-50431857 MS.gene051742:CDS 45.0%
GGGAGTAATTTGACTGCGTT+AGG - chr7.3:50431691-50431710 MS.gene051742:CDS 45.0%
GTATAAACCAAACCCGAACC+CGG + chr7.3:50431244-50431263 None:intergenic 45.0%
GTTTGATTCTACGCATCGCA+GGG + chr7.3:50430955-50430974 None:intergenic 45.0%
TAATTTGACTGCGTTAGGGG+AGG - chr7.3:50431696-50431715 MS.gene051742:CDS 45.0%
TACGGCTCATTATTCTCTGG+CGG + chr7.3:50431640-50431659 None:intergenic 45.0%
TACGGTTAAAGATCCGGGTT+CGG - chr7.3:50431228-50431247 MS.gene051742:CDS 45.0%
TATTAAACCGGGTCCAGGTA+CGG - chr7.3:50431519-50431538 MS.gene051742:CDS 45.0%
TATTGTATCCGAACGGGTCT+AGG - chr7.3:50431557-50431576 MS.gene051742:CDS 45.0%
TATTTATCGCGGAAACGGGT+TGG - chr7.3:50431335-50431354 MS.gene051742:CDS 45.0%
TCACAACCAGGAATCTGCTA+CGG - chr7.3:50430623-50430642 MS.gene051742:intron 45.0%
TCATAAACCCTAGACCCGTT+CGG + chr7.3:50431568-50431587 None:intergenic 45.0%
TCGGAGCTCCAAGGAAAAAA+CGG + chr7.3:50431160-50431179 None:intergenic 45.0%
TGGGCACAGTTTAAGAAGAC+TGG - chr7.3:50431835-50431854 MS.gene051742:CDS 45.0%
TGTTTGATTCTACGCATCGC+AGG + chr7.3:50430956-50430975 None:intergenic 45.0%
TTACGAAACGCAGCGTTTGA+AGG + chr7.3:50431058-50431077 None:intergenic 45.0%
TTGACATATGCTTGCTCGCA+GGG - chr7.3:50431721-50431740 MS.gene051742:CDS 45.0%
TTTGATCCATTGGTCGGAGA+GGG + chr7.3:50430831-50430850 None:intergenic 45.0%
! AGCATGCCAAAACACCGATT+CGG + chr7.3:50431794-50431813 None:intergenic 45.0%
! AGTGCTGGAAACTCTGAATC+CGG + chr7.3:50431613-50431632 None:intergenic 45.0%
! GCTTGCTACTCAAACTGCAA+AGG - chr7.3:50431879-50431898 MS.gene051742:CDS 45.0%
!! AACGAGGAGGTAACGGATTA+GGG + chr7.3:50430882-50430901 None:intergenic 45.0%
!! AGGTAACGGATTAGGGTTTG+TGG + chr7.3:50430875-50430894 None:intergenic 45.0%
!! GGTAACGGATTAGGGTTTGT+GGG + chr7.3:50430874-50430893 None:intergenic 45.0%
!! TTAAGCCCGAATCGGTGTTT+TGG - chr7.3:50431785-50431804 MS.gene051742:CDS 45.0%
AAAACCGGTTGTTGGGACAC+CGG - chr7.3:50431444-50431463 MS.gene051742:CDS 50.0%
ACGGTTAAAGATCCGGGTTC+GGG - chr7.3:50431229-50431248 MS.gene051742:CDS 50.0%
ACTTGTGATCCGGTTCAACC+CGG - chr7.3:50431751-50431770 MS.gene051742:CDS 50.0%
AGATGAAGCCACGTGGAGTT+TGG + chr7.3:50430929-50430948 None:intergenic 50.0%
AGTTGACCGTAGCAGATTCC+TGG + chr7.3:50430632-50430651 None:intergenic 50.0%
CTAATCCGTTACCTCCTCGT+TGG - chr7.3:50430881-50430900 MS.gene051742:intron 50.0%
GGAATCTGCTACGGTCAACT+AGG - chr7.3:50430632-50430651 MS.gene051742:intron 50.0%
GTTGAACCGGATCACAAGTC+CGG + chr7.3:50431750-50431769 None:intergenic 50.0%
GTTGACATATGCTTGCTCGC+AGG - chr7.3:50431720-50431739 MS.gene051742:CDS 50.0%
TCAGGCTTCTCATCACAACC+AGG - chr7.3:50430611-50430630 MS.gene051742:intron 50.0%
TGACATATGCTTGCTCGCAG+GGG - chr7.3:50431722-50431741 MS.gene051742:CDS 50.0%
TGATCTTTCGGGGAAGACAC+CGG - chr7.3:50431591-50431610 MS.gene051742:CDS 50.0%
TGATTTCGTTGCCAACGAGG+AGG + chr7.3:50430895-50430914 None:intergenic 50.0%
! TAAAGATCCGGGTTCGGGTT+TGG - chr7.3:50431234-50431253 MS.gene051742:CDS 50.0%
!! AGGGAAGATTTGGTGTGTGG+CGG - chr7.3:50431663-50431682 MS.gene051742:CDS 50.0%
!! CAACGAGGAGGTAACGGATT+AGG + chr7.3:50430883-50430902 None:intergenic 50.0%
!! GCATGCCAAAACACCGATTC+GGG + chr7.3:50431793-50431812 None:intergenic 50.0%
!!! CACTTTTTCCCGGGTTGAAC+CGG + chr7.3:50431763-50431782 None:intergenic 50.0%
ACCAAACCCTCTCCGACCAA+TGG - chr7.3:50430822-50430841 MS.gene051742:intron 55.0%
AGAATCAAACCCGGTCGAGC+CGG + chr7.3:50431466-50431485 None:intergenic 55.0%
CATCCACACCAAACTCCACG+TGG - chr7.3:50430918-50430937 MS.gene051742:CDS 55.0%
CGAAACGCAGCGTTTGAAGG+TGG + chr7.3:50431055-50431074 None:intergenic 55.0%
CGTTGCCAACGAGGAGGTAA+CGG + chr7.3:50430889-50430908 None:intergenic 55.0%
CTTGTGATCCGGTTCAACCC+GGG - chr7.3:50431752-50431771 MS.gene051742:CDS 55.0%
GGCTCATTATTCTCTGGCGG+AGG + chr7.3:50431637-50431656 None:intergenic 55.0%
TCCATTGGTCGGAGAGGGTT+TGG + chr7.3:50430826-50430845 None:intergenic 55.0%
! AAGCCACGTGGAGTTTGGTG+TGG + chr7.3:50430924-50430943 None:intergenic 55.0%
! CAGGTACGGAGCGGCATTTT+GGG - chr7.3:50431533-50431552 MS.gene051742:CDS 55.0%
! TTTTCCTTGGAGCTCCGACC+CGG - chr7.3:50431162-50431181 MS.gene051742:CDS 55.0%
!! GAAACGGGTTGGCCTAATGG+TGG - chr7.3:50431346-50431365 MS.gene051742:CDS 55.0%
AGGGACGAGATGAAGCCACG+TGG + chr7.3:50430936-50430955 None:intergenic 60.0%
ATGCTTGCTCGCAGGGGAAC+CGG - chr7.3:50431728-50431747 MS.gene051742:CDS 60.0%
CCAAAATGCCGCTCCGTACC+TGG + chr7.3:50431535-50431554 None:intergenic 60.0%
GGGGAACCGGACTTGTGATC+CGG - chr7.3:50431741-50431760 MS.gene051742:CDS 60.0%
TTAACCGGGTCGGAGCTCCA+AGG + chr7.3:50431169-50431188 None:intergenic 60.0%
! CCAGGTACGGAGCGGCATTT+TGG - chr7.3:50431532-50431551 MS.gene051742:CDS 60.0%
! TTCTCTGGCGGAGGAAGTGC+TGG + chr7.3:50431628-50431647 None:intergenic 60.0%
! TTTGGTGTGTGGCGGTGCGT+GGG - chr7.3:50431671-50431690 MS.gene051742:CDS 60.0%
!! ATTTGGTGTGTGGCGGTGCG+TGG - chr7.3:50431670-50431689 MS.gene051742:CDS 60.0%
!! GCGGAAACGGGTTGGCCTAA+TGG - chr7.3:50431343-50431362 MS.gene051742:CDS 60.0%
AACCGGGTCCAGGTACGGAG+CGG - chr7.3:50431524-50431543 MS.gene051742:CDS 65.0%
CGAGCCGGTGTCCCAACAAC+CGG + chr7.3:50431451-50431470 None:intergenic 65.0%
!! TGTTGGGACACCGGCTCGAC+CGG - chr7.3:50431453-50431472 MS.gene051742:CDS 65.0%
TGCCGCTCCGTACCTGGACC+CGG + chr7.3:50431529-50431548 None:intergenic 70.0%
!! GTTGGGACACCGGCTCGACC+GGG - chr7.3:50431454-50431473 MS.gene051742:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 50430421 50432400 50430421 ID=MS.gene051742
chr7.3 mRNA 50430421 50432400 50430421 ID=MS.gene051742.t1;Parent=MS.gene051742
chr7.3 exon 50432349 50432400 50432349 ID=MS.gene051742.t1.exon1;Parent=MS.gene051742.t1
chr7.3 CDS 50432349 50432400 50432349 ID=cds.MS.gene051742.t1;Parent=MS.gene051742.t1
chr7.3 exon 50430914 50432215 50430914 ID=MS.gene051742.t1.exon2;Parent=MS.gene051742.t1
chr7.3 CDS 50430914 50432215 50430914 ID=cds.MS.gene051742.t1;Parent=MS.gene051742.t1
chr7.3 exon 50430421 50430458 50430421 ID=MS.gene051742.t1.exon3;Parent=MS.gene051742.t1
chr7.3 CDS 50430421 50430458 50430421 ID=cds.MS.gene051742.t1;Parent=MS.gene051742.t1
Gene Sequence

>MS.gene051742

ATGGCTTTGTTTCTCTTCCTTCTTTTCTCCATTCTATTCAACAGCATATCAAGTAAGTAACAAAACACTTCTTGGTTTCTTCATTCTCATCTCTTGTGATTTGGTTATCTATGCGCGCAACTACAGAGACTAATATCTCTTACATTGATTATCTTATTTTTTTCTTATTAATGTTTACTTCACAGATAGCTCAGGCTTCTCATCACAACCAGGAATCTGCTACGGTCAACTAGGAAACAACCTACCAAAACCCTCAAAATCACTAACCCTAATCAAATCCTTAAAAGCAAAACGCATCAAAATCTATGACACAAACCCACAAATCCTAACAACCTTAAAAAACACAAACATCCAAATCTCAATCATGCTCCCAAACGAACTCATCACAAACATCTCAACAAACCAAACCCTCTCCGACCAATGGATCAAATCCAACATTCTACCTTATTACCCACAAACCCTAATCCGTTACCTCCTCGTTGGCAACGAAATCATCTCATCCACACCAAACTCCACGTGGCTTCATCTCGTCCCTGCGATGCGTAGAATCAAACACTCATTGAAAAAATTCAGAATCAAAAGAATCAAAGTTGGTACTTCTTCTGCTATGGATGTTCTAGAAACTTCTTTTCCACCTTCAAACGCTGCGTTTCGTAAAGATATAGCGGTTCAAGTTATTAAGCCCATGCTTAGGTTTTTAAACCGGACTAAATCTTTTTTCTTTTTGGATGTTTATCCGTTTTTTCCTTGGAGCTCCGACCCGGTTAATGTTAATTTGGATTATGCTTTGTTTAGAGAGAGTAATGTTACGGTTAAAGATCCGGGTTCGGGTTTGGTTTATACGAATTTATTTGATCAGATGGTGGATGCGGTTTATTTTGCAATGGAGAAACTTGGGTTTCCGGATGTTCGGATATTTATCGCGGAAACGGGTTGGCCTAATGGTGGTGATGTTGATCAAATTGGTGCTAATGTTTTTAATGCTGCTACTTATAATCGTAATTTTGTTAAAAAAGTTATGAAAAAACCGGTTGTTGGGACACCGGCTCGACCGGGTTTGATTCTTCCGAGTTTTTTATTTGCTTTGTTTAATGAGAATATTAAACCGGGTCCAGGTACGGAGCGGCATTTTGGGTTATTGTATCCGAACGGGTCTAGGGTTTATGACATTGATCTTTCGGGGAAGACACCGGATTCAGAGTTTCCAGCACTTCCTCCGCCAGAGAATAATGAGCCGTATAAAGGGAAGATTTGGTGTGTGGCGGTGCGTGGGAGTAATTTGACTGCGTTAGGGGAGGCGTTGACATATGCTTGCTCGCAGGGGAACCGGACTTGTGATCCGGTTCAACCCGGGAAAAAGTGTTTTAAGCCCGAATCGGTGTTTTGGCATGCTAGCTATGCGTTTAGTTCCTATTGGGCACAGTTTAAGAAGACTGGAGGAACTTGTTACTTTAATGGGCTTGCTACTCAAACTGCAAAGGATCCAAGTAAGTACATTTTTTTATTTTAATACTAAACAATTAGTCTAGTTTAACCCTCTAATTGTGAGTTATGATTATATTTAACTATAGAGTTGCATTTCATTCTTAAGTAAGTGAGTAAGTATTTTCATTTTGATATAAGAAAGGTCAGTTTTACAACAAAAAATTGTTGGTTGATTTTCTTAGTATTGTTCCCACAATGGCTGTTAAATGTCATGTTGACTAAAGATTGCAAGATTTTGTCATCAAATGTTTTTCAAACCAAATGTATAACCATTAAATTGAAGTACTTGATTTGTTAACAAGGACATGATCCAGTTAATTTAAACTTAACTACTTTAATTTAATAAATGAAAATGTAATCTTGTTTGAGTATGAAATTATTTTCTTATTTTTGTTTTCCTTATTATACTTTTCCATTACTTAACGTTTTTATTTTATCTTTTTTCGAACATGTGTAGGTTATGGATCTTGCAAGTTTCCAAGTGTGACACTTTGA

Protein sequence

>MS.gene051742.t1

MALFLFLLFSILFNSISNSSGFSSQPGICYGQLGNNLPKPSKSLTLIKSLKAKRIKIYDTNPQILTTLKNTNIQISIMLPNELITNISTNQTLSDQWIKSNILPYYPQTLIRYLLVGNEIISSTPNSTWLHLVPAMRRIKHSLKKFRIKRIKVGTSSAMDVLETSFPPSNAAFRKDIAVQVIKPMLRFLNRTKSFFFLDVYPFFPWSSDPVNVNLDYALFRESNVTVKDPGSGLVYTNLFDQMVDAVYFAMEKLGFPDVRIFIAETGWPNGGDVDQIGANVFNAATYNRNFVKKVMKKPVVGTPARPGLILPSFLFALFNENIKPGPGTERHFGLLYPNGSRVYDIDLSGKTPDSEFPALPPPENNEPYKGKIWCVAVRGSNLTALGEALTYACSQGNRTCDPVQPGKKCFKPESVFWHASYAFSSYWAQFKKTGGTCYFNGLATQTAKDPSYGSCKFPSVTL