Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035368.t1 | XP_013458265.1 | 99.1 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 2.10E-119 | 438.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035368.t1 | Q93ZE5 | 75.8 | 215 | 52 | 0 | 5 | 219 | 4 | 218 | 5.1e-90 | 332.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035368.t1 | A0A072USI0 | 99.1 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 1.5e-119 | 438.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071503 | MS.gene035368 | PPI |
| MS.gene071505 | MS.gene035368 | PPI |
| MS.gene035366 | MS.gene035368 | PPI |
| MS.gene035368 | MS.gene066362 | PPI |
| MS.gene035368 | MS.gene77824 | PPI |
| MS.gene035368 | MS.gene041601 | PPI |
| MS.gene041603 | MS.gene035368 | PPI |
| MS.gene035368 | MS.gene45012 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035368.t1 | MTR_4g120230 | 99.107 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 3.27e-164 | 452 |
| MS.gene035368.t1 | MTR_4g120230 | 98.413 | 189 | 3 | 0 | 1 | 189 | 1 | 189 | 5.35e-137 | 382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035368.t1 | AT4G15940 | 75.349 | 215 | 52 | 1 | 5 | 219 | 4 | 217 | 9.12e-119 | 337 |
| MS.gene035368.t1 | AT3G16700 | 73.488 | 215 | 57 | 0 | 5 | 219 | 4 | 218 | 1.38e-115 | 329 |
| MS.gene035368.t1 | AT3G16700 | 72.414 | 145 | 40 | 0 | 5 | 149 | 4 | 148 | 1.80e-73 | 220 |
| MS.gene035368.t1 | AT3G16700 | 74.286 | 105 | 27 | 0 | 5 | 109 | 4 | 108 | 1.03e-51 | 164 |
| MS.gene035368.t1 | AT3G16700 | 74.286 | 105 | 27 | 0 | 5 | 109 | 4 | 108 | 1.03e-51 | 164 |
Find 0 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCATCTTTATAAAATAT+AGG | + | 32562:2196-2215 | MS.gene035368:intron | 10.0% |
| !! | TAAAATATTCAATTAATATG+AGG | + | 32562:2318-2337 | MS.gene035368:intron | 10.0% |
| !!! | TCATATTAATTGAATATTTT+AGG | - | 32562:2319-2338 | MS.gene035368:intergenic | 10.0% |
| !! | ATTTATTATCTTTGTATATC+AGG | + | 32562:534-553 | MS.gene035368:intron | 15.0% |
| !!! | AATCAAATTTGAAATTTGAA+AGG | - | 32562:498-517 | MS.gene035368:intergenic | 15.0% |
| !!! | TTTAACAAAGTACTTAAAAA+AGG | + | 32562:2252-2271 | MS.gene035368:intron | 15.0% |
| !! | CTTATGAAGCTAATTAAAAA+TGG | - | 32562:1686-1705 | MS.gene035368:intergenic | 20.0% |
| !! | TCTTGGAAAAAAATAAAGTT+TGG | + | 32562:1993-2012 | MS.gene035368:intron | 20.0% |
| !! | TGAATTGAATTGAATTGATT+TGG | - | 32562:235-254 | MS.gene035368:intergenic | 20.0% |
| !! | TTAGCAATGTGTTATATTTA+AGG | + | 32562:699-718 | MS.gene035368:intron | 20.0% |
| !!! | ACTTTATTTTTTTCCAAGAA+CGG | - | 32562:1992-2011 | MS.gene035368:intergenic | 20.0% |
| !!! | ATTTTAGATGATGAATGTTT+GGG | + | 32562:1790-1809 | MS.gene035368:intron | 20.0% |
| !!! | GAATTGAATTGAATTGATTT+GGG | - | 32562:234-253 | MS.gene035368:intergenic | 20.0% |
| !!! | TAATTGATTCACTAATTTTC+AGG | + | 32562:295-314 | MS.gene035368:intron | 20.0% |
| !!! | TATTTTAGATGATGAATGTT+TGG | + | 32562:1789-1808 | MS.gene035368:intron | 20.0% |
| ! | ACATATATTGCTAAGTAGTA+TGG | - | 32562:1180-1199 | MS.gene035368:intergenic | 25.0% |
| ! | CAATATATGTCTATCAACAT+AGG | - | 32562:1881-1900 | MS.gene035368:intergenic | 25.0% |
| ! | CTCATATCAATAACATCTAT+GGG | - | 32562:1385-1404 | MS.gene035368:intergenic | 25.0% |
| ! | GCATTATATTTAACCTATGA+AGG | - | 32562:2501-2520 | MS.gene035368:intergenic | 25.0% |
| ! | GTTAGAAAAAGGAAAATATC+CGG | + | 32562:2650-2669 | MS.gene035368:CDS | 25.0% |
| ! | TAAACTAATTGCATAGAGAT+GGG | + | 32562:1591-1610 | MS.gene035368:intron | 25.0% |
| ! | TCATATCAATAACATCTATG+GGG | - | 32562:1384-1403 | MS.gene035368:intergenic | 25.0% |
| ! | TCATCATAATCAATGTTAAC+TGG | - | 32562:2540-2559 | MS.gene035368:intergenic | 25.0% |
| ! | TCTCATATCAATAACATCTA+TGG | - | 32562:1386-1405 | MS.gene035368:intergenic | 25.0% |
| ! | TGGAGTTTAATGTTAGAAAA+AGG | + | 32562:2639-2658 | MS.gene035368:CDS | 25.0% |
| ! | TTGTTGAAAAAGACACTAAT+AGG | - | 32562:1264-1283 | MS.gene035368:intergenic | 25.0% |
| ! | TTTCTTACAATAGGACTAAT+TGG | - | 32562:832-851 | MS.gene035368:intergenic | 25.0% |
| AAAAGACACTAATAGGAACT+CGG | - | 32562:1257-1276 | MS.gene035367:intergenic | 30.0% | |
| AACTACAATACTATATGCTG+TGG | - | 32562:1311-1330 | MS.gene035368:intergenic | 30.0% | |
| AAGTTTGAATATCATGTCCT+TGG | - | 32562:1663-1682 | MS.gene035368:intergenic | 30.0% | |
| ACATCGTCTTACTTGAAAAA+TGG | + | 32562:341-360 | MS.gene035368:CDS | 30.0% | |
| ACTACAATACTATATGCTGT+GGG | - | 32562:1310-1329 | MS.gene035368:intergenic | 30.0% | |
| ACTTAATCAGTTTCCTTCAT+AGG | + | 32562:2485-2504 | MS.gene035368:intron | 30.0% | |
| AGCATACACTTTCTTACAAT+AGG | - | 32562:841-860 | MS.gene035368:intergenic | 30.0% | |
| CAAACATATCTCGCAAATTT+AGG | - | 32562:1072-1091 | MS.gene035368:intergenic | 30.0% | |
| CAGATTAGGAAATTTGAGAA+AGG | - | 32562:260-279 | MS.gene035368:intergenic | 30.0% | |
| CTAAACTAATTGCATAGAGA+TGG | + | 32562:1590-1609 | MS.gene035368:intron | 30.0% | |
| CTCAAACATTTGAAAACTCA+AGG | - | 32562:2226-2245 | MS.gene035368:intergenic | 30.0% | |
| GAATCAATTACTACAGTACA+CGG | - | 32562:285-304 | MS.gene035368:intergenic | 30.0% | |
| TCTTAAAAGCTAGCTATCAA+GGG | + | 32562:1117-1136 | MS.gene035368:intron | 30.0% | |
| TCTTACATGACATTGTTTGA+AGG | + | 32562:1707-1726 | MS.gene035368:CDS | 30.0% | |
| TTGTATATCAGGTTATGCTT+TGG | + | 32562:545-564 | MS.gene035368:intron | 30.0% | |
| ! | CATCTCTATGCAATTAGTTT+AGG | - | 32562:1592-1611 | MS.gene035368:intergenic | 30.0% |
| ! | TGATCTAGAATTATGGCTAA+AGG | + | 32562:1509-1528 | MS.gene035368:CDS | 30.0% |
| !! | ACAGATTCTAGCTTAACAAA+TGG | + | 32562:2291-2310 | MS.gene035368:intron | 30.0% |
| !!! | AGTTTTTTTGCACTTCTTCT+TGG | + | 32562:1536-1555 | MS.gene035368:intron | 30.0% |
| !!! | TTGATAGCTAGCTTTTAAGA+GGG | - | 32562:1117-1136 | MS.gene035368:intergenic | 30.0% |
| !!! | TTTTTCAAGTAAGACGATGT+TGG | - | 32562:341-360 | MS.gene035368:intergenic | 30.0% |
| !!! | TTTTTTTCCAAGAACGGTTT+CGG | - | 32562:1986-2005 | MS.gene035368:intergenic | 30.0% |
| AAAGACACTAATAGGAACTC+GGG | - | 32562:1256-1275 | MS.gene035367:intergenic | 35.0% | |
| AACAATTACACTTGAACCAC+TGG | + | 32562:630-649 | MS.gene035368:intron | 35.0% | |
| AAGATAACTGCTGGTATTAC+AGG | + | 32562:2605-2624 | MS.gene035368:CDS | 35.0% | |
| AATATCACTACCATTAGACG+TGG | - | 32562:2065-2084 | MS.gene035368:intergenic | 35.0% | |
| AATTCCATATGACATGCACA+CGG | - | 32562:1029-1048 | MS.gene035368:intergenic | 35.0% | |
| AATTCTAGATCATCAGGGTT+TGG | - | 32562:1501-1520 | MS.gene035368:intergenic | 35.0% | |
| ACAATTACACTTGAACCACT+GGG | + | 32562:631-650 | MS.gene035368:intron | 35.0% | |
| AGCCATAATTCTAGATCATC+AGG | - | 32562:1507-1526 | MS.gene035368:intergenic | 35.0% | |
| CTCTTAAAAGCTAGCTATCA+AGG | + | 32562:1116-1135 | MS.gene035368:intron | 35.0% | |
| CTTAAAAGCTAGCTATCAAG+GGG | + | 32562:1118-1137 | MS.gene035368:intron | 35.0% | |
| GAAATGATTCCACTTTGTCT+TGG | + | 32562:910-929 | MS.gene035368:intron | 35.0% | |
| GCCATAATTCTAGATCATCA+GGG | - | 32562:1506-1525 | MS.gene035368:intergenic | 35.0% | |
| TCGTCTTACTTGAAAAATGG+CGG | + | 32562:344-363 | MS.gene035368:CDS | 35.0% | |
| TGTAGGTAGATGAGGAAATT+CGG | + | 32562:1624-1643 | MS.gene035368:intron | 35.0% | |
| TTAAAAGCTAGCTATCAAGG+GGG | + | 32562:1119-1138 | MS.gene035368:intron | 35.0% | |
| TTCAACTTACCTAAGTCACA+AGG | - | 32562:2372-2391 | MS.gene035368:intergenic | 35.0% | |
| TTGAACAATCCAAGACAAAG+TGG | - | 32562:922-941 | MS.gene035368:intergenic | 35.0% | |
| TTGTCAGAAGCTCTTTGATT+TGG | + | 32562:118-137 | MS.gene035368:CDS | 35.0% | |
| ! | ACCCTGATGATCTAGAATTA+TGG | + | 32562:1502-1521 | MS.gene035368:CDS | 35.0% |
| ! | ACGTCTAATGGTAGTGATAT+TGG | + | 32562:2064-2083 | MS.gene035368:intron | 35.0% |
| ! | ATCTTTTGACCTTCTTTCAC+AGG | - | 32562:2590-2609 | MS.gene035368:intergenic | 35.0% |
| ! | CATTGATTATGATGATGTGC+AGG | + | 32562:2545-2564 | MS.gene035368:intron | 35.0% |
| ! | TCTTTTGACCTTCTTTCACA+GGG | - | 32562:2589-2608 | MS.gene035368:intergenic | 35.0% |
| ! | TGTCAGAAGCTCTTTGATTT+GGG | + | 32562:119-138 | MS.gene035368:CDS | 35.0% |
| !! | GTTGGTTTGAGAAACAATAC+TGG | - | 32562:323-342 | MS.gene035368:intergenic | 35.0% |
| !!! | CTTGATAGCTAGCTTTTAAG+AGG | - | 32562:1118-1137 | MS.gene035368:intergenic | 35.0% |
| !!! | TTTTTTCCAAGAACGGTTTC+GGG | - | 32562:1985-2004 | MS.gene035368:intergenic | 35.0% |
| AAGTATACGAGCCTTTGCAA+AGG | + | 32562:1915-1934 | MS.gene035368:intron | 40.0% | |
| AATGATATGAGCTGCCAAGT+GGG | - | 32562:2157-2176 | MS.gene035368:intergenic | 40.0% | |
| ACCCTCGATAATAAGGTCTT+GGG | + | 32562:1847-1866 | MS.gene035368:intron | 40.0% | |
| ACCTGCAGACTAACAACAAA+AGG | - | 32562:770-789 | MS.gene035368:intergenic | 40.0% | |
| AGAAACATCACGAGCTTTCT+TGG | - | 32562:435-454 | MS.gene035368:intergenic | 40.0% | |
| ATCGAGTACCCTCGATAATA+AGG | + | 32562:1840-1859 | MS.gene035368:intron | 40.0% | |
| ATTCCATATGACATGCACAC+GGG | - | 32562:1028-1047 | MS.gene035368:intergenic | 40.0% | |
| CATACTTATGTACATCCCAG+TGG | - | 32562:649-668 | MS.gene035368:intergenic | 40.0% | |
| CCTGCAGACTAACAACAAAA+GGG | - | 32562:769-788 | MS.gene035368:intergenic | 40.0% | |
| CTTACTACGAGCATTACTTG+TGG | + | 32562:2451-2470 | MS.gene035368:intron | 40.0% | |
| GAAGGAGATGTCATTCTAAC+TGG | + | 32562:1725-1744 | MS.gene035368:CDS | 40.0% | |
| GAAGGTCAAAAGATAACTGC+TGG | + | 32562:2596-2615 | MS.gene035368:CDS | 40.0% | |
| GAGCTAACTTGACTCACTTT+CGG | - | 32562:2129-2148 | MS.gene035368:intergenic | 40.0% | |
| GCACTTCTTCTTGGATACTT+TGG | + | 32562:1545-1564 | MS.gene035368:intron | 40.0% | |
| GCTAAGTAGTATGGAATGCT+CGG | - | 32562:1171-1190 | MS.gene035368:intergenic | 40.0% | |
| GCTGAAATACCTTGTGACTT+AGG | + | 32562:2360-2379 | MS.gene035368:intron | 40.0% | |
| GTATCAAGTATCAAGTCACG+TGG | + | 32562:1206-1225 | MS.gene035368:intron | 40.0% | |
| TAATGATATGAGCTGCCAAG+TGG | - | 32562:2158-2177 | MS.gene035368:intergenic | 40.0% | |
| TAATTGGTGTGAACGTATCC+TGG | - | 32562:816-835 | MS.gene035368:intergenic | 40.0% | |
| TACAGTACACGGATCAGATT+AGG | - | 32562:274-293 | MS.gene035368:intergenic | 40.0% | |
| TACCCTCGATAATAAGGTCT+TGG | + | 32562:1846-1865 | MS.gene035368:intron | 40.0% | |
| TATACCAGCAACGTAATCCA+TGG | - | 32562:468-487 | MS.gene035368:intergenic | 40.0% | |
| TATCAAGTCACGTGGATACT+CGG | + | 32562:1214-1233 | MS.gene035368:intron | 40.0% | |
| TCAACTGAACCAACACTTGA+TGG | - | 32562:1816-1835 | MS.gene035368:intergenic | 40.0% | |
| TGTAGACCAAGTCCTTGTAA+AGG | - | 32562:992-1011 | MS.gene035368:intergenic | 40.0% | |
| TTACCACAAGCAATGAGTCA+TGG | + | 32562:1357-1376 | MS.gene035368:intron | 40.0% | |
| TTACCTTAGCAGCAGATTGA+AGG | - | 32562:593-612 | MS.gene035368:intergenic | 40.0% | |
| ! | AAGAGTGTGTTTGTGACCTT+GGG | - | 32562:209-228 | MS.gene035368:intergenic | 40.0% |
| ! | AGATGGGTTTGCTTTGTTGT+AGG | + | 32562:1607-1626 | MS.gene035368:intron | 40.0% |
| ! | TGCTTTGTTGTAGGTAGATG+AGG | + | 32562:1616-1635 | MS.gene035368:intron | 40.0% |
| ! | TTTTTCCAAGAACGGTTTCG+GGG | - | 32562:1984-2003 | MS.gene035368:intergenic | 40.0% |
| !! | CAAGTGTTGGTTCAGTTGAT+TGG | + | 32562:1817-1836 | MS.gene035368:intron | 40.0% |
| ACCCCAAGACCTTATTATCG+AGG | - | 32562:1852-1871 | MS.gene035368:intergenic | 45.0% | |
| AGACGTTGATCGCCTTTACA+AGG | + | 32562:977-996 | MS.gene035368:intron | 45.0% | |
| AGATGAGGAAATTCGGCAGA+AGG | + | 32562:1631-1650 | MS.gene035368:CDS | 45.0% | |
| AGTTAGCCGAGCTTGATCTT+AGG | + | 32562:2418-2437 | MS.gene035368:intron | 45.0% | |
| ATAGGAACTCGGGTATTACG+CGG | - | 32562:1246-1265 | MS.gene035368:intergenic | 45.0% | |
| ATCAAGTCACGTGGATACTC+GGG | + | 32562:1215-1234 | MS.gene035368:intron | 45.0% | |
| ATCAGGTTATGCTTTGGCAC+TGG | + | 32562:551-570 | MS.gene035368:intron | 45.0% | |
| ATGTTTGGGCCATCAAGTGT+TGG | + | 32562:1804-1823 | MS.gene035368:intron | 45.0% | |
| ATTTGCTTCGAGATCAGGCT+TGG | + | 32562:2095-2114 | MS.gene035368:intron | 45.0% | |
| CAAGCCATGATCCTTTGCAA+AGG | - | 32562:1929-1948 | MS.gene035368:intergenic | 45.0% | |
| CCCCAAGACCTTATTATCGA+GGG | - | 32562:1851-1870 | MS.gene035368:intergenic | 45.0% | |
| CCCTCGATAATAAGGTCTTG+GGG | + | 32562:1848-1867 | MS.gene035368:intron | 45.0% | |
| CCTAAGCCTAAGATCAAGCT+CGG | - | 32562:2427-2446 | MS.gene035368:intergenic | 45.0% | |
| CTTCCATGGAGTTTGGCAAA+AGG | + | 32562:790-809 | MS.gene035368:CDS | 45.0% | |
| GAAGAGTTAGCCACGTCTAA+TGG | + | 32562:2052-2071 | MS.gene035368:intron | 45.0% | |
| GATGAGGAAATTCGGCAGAA+GGG | + | 32562:1632-1651 | MS.gene035368:CDS | 45.0% | |
| GATTTGGGCACGAAGATCAT+CGG | + | 32562:134-153 | MS.gene035368:CDS | 45.0% | |
| GCCTGATCTCGAAGCAAATA+AGG | - | 32562:2094-2113 | MS.gene035368:intergenic | 45.0% | |
| TGATCGCCTTTACAAGGACT+TGG | + | 32562:983-1002 | MS.gene035368:intron | 45.0% | |
| TGTGTTTGTGACCTTGGGAA+CGG | - | 32562:204-223 | MS.gene035368:intergenic | 45.0% | |
| TTACCCGTGTGCATGTCATA+TGG | + | 32562:1022-1041 | MS.gene035368:intron | 45.0% | |
| TTTGCTTCGAGATCAGGCTT+GGG | + | 32562:2096-2115 | MS.gene035368:intron | 45.0% | |
| ! | GAAGAGTGTGTTTGTGACCT+TGG | - | 32562:210-229 | MS.gene035368:intergenic | 45.0% |
| ! | GCCTAGTTCTTTAGCATGAG+CGG | - | 32562:177-196 | MS.gene035368:intergenic | 45.0% |
| ! | TGTTTCTGAATCCTCTGCCA+TGG | + | 32562:448-467 | MS.gene035368:CDS | 45.0% |
| !! | GCCTTATTTGCTTCGAGATC+AGG | + | 32562:2090-2109 | MS.gene035368:intron | 45.0% |
| !!! | CCCTTTTGTTGTTAGTCTGC+AGG | + | 32562:766-785 | MS.gene035368:intron | 45.0% |
| AAGAACGGTTTCGGGGAGAA+GGG | - | 32562:1977-1996 | MS.gene035368:intergenic | 50.0% | |
| AGCAACGTAATCCATGGCAG+AGG | - | 32562:462-481 | MS.gene035368:intergenic | 50.0% | |
| AGCTTTCTTGGCGATGACGA+CGG | - | 32562:423-442 | MS.gene035368:intergenic | 50.0% | |
| ATGGAGTTTGGCAAAAGGCC+AGG | + | 32562:795-814 | MS.gene035368:CDS | 50.0% | |
| CATTAAACTCCACGTCCACG+AGG | - | 32562:2631-2650 | MS.gene035368:intergenic | 50.0% | |
| CCGAGCTTGATCTTAGGCTT+AGG | + | 32562:2424-2443 | MS.gene035368:intron | 50.0% | |
| CGAGCCTTTGCAAAGGATCA+TGG | + | 32562:1922-1941 | MS.gene035368:intron | 50.0% | |
| GCCGCTCATGCTAAAGAACT+AGG | + | 32562:173-192 | MS.gene035368:CDS | 50.0% | |
| GGACCATGACTCATTGCTTG+TGG | - | 32562:1363-1382 | MS.gene035368:intergenic | 50.0% | |
| GGACCTTCAATCTGCTGCTA+AGG | + | 32562:587-606 | MS.gene035368:CDS | 50.0% | |
| TGCAGGTCTTCCATGGAGTT+TGG | + | 32562:783-802 | MS.gene035368:CDS | 50.0% | |
| TGGAGAGAACTCTCGTTGTG+TGG | - | 32562:383-402 | MS.gene035368:intergenic | 50.0% | |
| TTGCTTCGAGATCAGGCTTG+GGG | + | 32562:2097-2116 | MS.gene035368:intron | 50.0% | |
| ! | AGGGTTTGGTACTGCAGTCT+TGG | - | 32562:1487-1506 | MS.gene035368:intergenic | 50.0% |
| ! | GGCACTGGATATGACTGCTA+GGG | + | 32562:566-585 | MS.gene035368:CDS | 50.0% |
| ! | GGGTTTGGTACTGCAGTCTT+GGG | - | 32562:1486-1505 | MS.gene035368:intergenic | 50.0% |
| ! | GGTAGAGTATCCACGTGACT+TGG | - | 32562:1150-1169 | MS.gene035368:intergenic | 50.0% |
| ! | GTTAGTCTGCAGGTCTTCCA+TGG | + | 32562:776-795 | MS.gene035368:intron | 50.0% |
| ! | TCTGCCATGGATTACGTTGC+TGG | + | 32562:461-480 | MS.gene035368:CDS | 50.0% |
| ! | TGGCACTGGATATGACTGCT+AGG | + | 32562:565-584 | MS.gene035368:CDS | 50.0% |
| ! | TGGCCTTTTGCCAAACTCCA+TGG | - | 32562:796-815 | MS.gene035368:intergenic | 50.0% |
| AGTTAGCTCCTGTGCCCACT+TGG | + | 32562:2140-2159 | MS.gene035368:intron | 55.0% | |
| CAAGAACGGTTTCGGGGAGA+AGG | - | 32562:1978-1997 | MS.gene035368:intergenic | 55.0% | |
| CTTCTCCCCGAAACCGTTCT+TGG | + | 32562:1976-1995 | MS.gene035368:intron | 55.0% | |
| CTTGTCGCGCTCTTGGAAAG+GGG | + | 32562:1945-1964 | MS.gene035368:intron | 55.0% | |
| GCTTGTCGCGCTCTTGGAAA+GGG | + | 32562:1944-1963 | MS.gene035368:intron | 55.0% | |
| TATTACAGGCCTCGTGGACG+TGG | + | 32562:2619-2638 | MS.gene035368:CDS | 55.0% | |
| TCGAGATCAGGCTTGGGGAT+GGG | + | 32562:2102-2121 | MS.gene035368:intron | 55.0% | |
| TCTTTCACAGGGCCAACACC+CGG | - | 32562:2578-2597 | MS.gene035368:intergenic | 55.0% | |
| TGCTGGTATTACAGGCCTCG+TGG | + | 32562:2613-2632 | MS.gene035368:CDS | 55.0% | |
| TTCGAGATCAGGCTTGGGGA+TGG | + | 32562:2101-2120 | MS.gene035368:intron | 55.0% | |
| ! | ATCATGGCTTGTCGCGCTCT+TGG | + | 32562:1938-1957 | MS.gene035368:intron | 55.0% |
| !! | GGTGTTGGCCCTGTGAAAGA+AGG | + | 32562:2578-2597 | MS.gene035368:CDS | 55.0% |
| AACGGTTTCGGGGAGAAGGG+AGG | - | 32562:1974-1993 | MS.gene035368:intergenic | 60.0% | |
| ACTAGGCAACGCCGTTCCCA+AGG | + | 32562:190-209 | MS.gene035368:CDS | 60.0% | |
| ATGAGCTGCCAAGTGGGCAC+AGG | - | 32562:2151-2170 | MS.gene035368:intergenic | 60.0% | |
| ATGATGTGCAGGCACTCCCC+CGG | + | 32562:2556-2575 | MS.gene035368:intron | 60.0% | |
| CGAGATCAGGCTTGGGGATG+GGG | + | 32562:2103-2122 | MS.gene035368:intron | 60.0% | |
| CGGCGAGTTCGACTTCGTGA+TGG | - | 32562:403-422 | MS.gene035368:intergenic | 60.0% | |
| CTTTCACAGGGCCAACACCC+GGG | - | 32562:2577-2596 | MS.gene035368:intergenic | 60.0% | |
| GGCACGAAGATCATCGGCGT+CGG | + | 32562:140-159 | MS.gene035368:CDS | 60.0% | |
| GGCTTGTCGCGCTCTTGGAA+AGG | + | 32562:1943-1962 | MS.gene035368:intron | 60.0% | |
| GGGGGAAGAACCAAGTCACG+TGG | + | 32562:1137-1156 | MS.gene035368:intron | 60.0% | |
| TCGGCAGAAGGGCTCAACCA+AGG | + | 32562:1643-1662 | MS.gene035368:CDS | 60.0% | |
| TTTCACAGGGCCAACACCCG+GGG | - | 32562:2576-2595 | MS.gene035368:intergenic | 60.0% | |
| TGATGTGCAGGCACTCCCCC+GGG | + | 32562:2557-2576 | MS.gene035368:intron | 65.0% | |
| TTCACAGGGCCAACACCCGG+GGG | - | 32562:2575-2594 | MS.gene035368:intergenic | 65.0% | |
| GCAGGCACTCCCCCGGGTGT+TGG | + | 32562:2563-2582 | MS.gene035368:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32562 | gene | 101 | 2679 | 101 | ID=MS.gene035368 |
| 32562 | mRNA | 101 | 2679 | 101 | ID=MS.gene035368.t1;Parent=MS.gene035368 |
| 32562 | exon | 101 | 211 | 101 | ID=MS.gene035368.t1.exon1;Parent=MS.gene035368.t1 |
| 32562 | CDS | 101 | 211 | 101 | ID=cds.MS.gene035368.t1;Parent=MS.gene035368.t1 |
| 32562 | exon | 317 | 482 | 317 | ID=MS.gene035368.t1.exon2;Parent=MS.gene035368.t1 |
| 32562 | CDS | 317 | 482 | 317 | ID=cds.MS.gene035368.t1;Parent=MS.gene035368.t1 |
| 32562 | exon | 556 | 608 | 556 | ID=MS.gene035368.t1.exon3;Parent=MS.gene035368.t1 |
| 32562 | CDS | 556 | 608 | 556 | ID=cds.MS.gene035368.t1;Parent=MS.gene035368.t1 |
| 32562 | exon | 781 | 843 | 781 | ID=MS.gene035368.t1.exon4;Parent=MS.gene035368.t1 |
| 32562 | CDS | 781 | 843 | 781 | ID=cds.MS.gene035368.t1;Parent=MS.gene035368.t1 |
| 32562 | exon | 1480 | 1530 | 1480 | ID=MS.gene035368.t1.exon5;Parent=MS.gene035368.t1 |
| 32562 | CDS | 1480 | 1530 | 1480 | ID=cds.MS.gene035368.t1;Parent=MS.gene035368.t1 |
| 32562 | exon | 1629 | 1746 | 1629 | ID=MS.gene035368.t1.exon6;Parent=MS.gene035368.t1 |
| 32562 | CDS | 1629 | 1746 | 1629 | ID=cds.MS.gene035368.t1;Parent=MS.gene035368.t1 |
| 32562 | exon | 2567 | 2679 | 2567 | ID=MS.gene035368.t1.exon7;Parent=MS.gene035368.t1 |
| 32562 | CDS | 2567 | 2679 | 2567 | ID=cds.MS.gene035368.t1;Parent=MS.gene035368.t1 |
| Gene Sequence |
| Protein sequence |
