Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071505.t1 | XP_013458265.1 | 98.9 | 187 | 2 | 0 | 1 | 187 | 38 | 224 | 2.40E-97 | 364.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071505.t1 | Q93ZE5 | 76.2 | 181 | 43 | 0 | 2 | 182 | 38 | 218 | 5.0e-75 | 282.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071505.t1 | A0A072USI0 | 98.9 | 187 | 2 | 0 | 1 | 187 | 38 | 224 | 1.8e-97 | 364.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052176 | MS.gene071505 | 0.80067 | 1.29E-48 | -1.69E-46 |
| MS.gene059899 | MS.gene071505 | 0.805861 | 1.09E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071505 | MS.gene035368 | PPI |
| MS.gene071505 | MS.gene041601 | PPI |
| MS.gene071505 | MS.gene45012 | PPI |
| MS.gene071505 | MS.gene041603 | PPI |
| MS.gene071505 | MS.gene071503 | PPI |
| MS.gene071505 | MS.gene035366 | PPI |
| MS.gene071505 | MS.gene066362 | PPI |
| MS.gene071505 | MS.gene77824 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071505.t1 | MTR_4g120230 | 98.930 | 187 | 2 | 0 | 1 | 187 | 38 | 224 | 9.85e-135 | 376 |
| MS.gene071505.t1 | MTR_4g120230 | 99.333 | 150 | 1 | 0 | 1 | 150 | 38 | 187 | 3.14e-107 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071505.t1 | AT4G15940 | 75.691 | 181 | 43 | 1 | 2 | 182 | 38 | 217 | 1.40e-98 | 284 |
| MS.gene071505.t1 | AT3G16700 | 74.033 | 181 | 47 | 0 | 2 | 182 | 38 | 218 | 1.35e-96 | 280 |
| MS.gene071505.t1 | AT3G16700 | 72.973 | 111 | 30 | 0 | 2 | 112 | 38 | 148 | 1.14e-54 | 171 |
| MS.gene071505.t1 | AT3G16700 | 76.056 | 71 | 17 | 0 | 2 | 72 | 38 | 108 | 1.15e-32 | 114 |
| MS.gene071505.t1 | AT3G16700 | 76.056 | 71 | 17 | 0 | 2 | 72 | 38 | 108 | 1.15e-32 | 114 |
Find 0 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCATCTTTATAAAATAT+AGG | - | 32564:13045-13064 | MS.gene071505:CDS | 10.0% |
| !! | TAAAATATTCAATTAATATG+AGG | - | 32564:13167-13186 | MS.gene071505:intron | 10.0% |
| !!! | TCATATTAATTGAATATTTT+AGG | + | 32564:13168-13187 | None:intergenic | 10.0% |
| !! | ATTTATTATCTTTGTATATC+AGG | - | 32564:11402-11421 | MS.gene071505:intron | 15.0% |
| !!! | AATCAAATTTGAAATTTGAA+AGG | + | 32564:11366-11385 | None:intergenic | 15.0% |
| !!! | TTTAACAAAGTACTTAAAAA+AGG | - | 32564:13101-13120 | MS.gene071505:intron | 15.0% |
| !! | CTTATGAAGCTAATTAAAAA+TGG | + | 32564:12534-12553 | None:intergenic | 20.0% |
| !! | TCTTGGAAAAAAATAAAGTT+TGG | - | 32564:12841-12860 | MS.gene071505:intron | 20.0% |
| !! | TTAGCAATGTGTTATATTTA+AGG | - | 32564:11565-11584 | MS.gene071505:intron | 20.0% |
| !!! | ACTTTATTTTTTTCCAAGAA+CGG | + | 32564:12840-12859 | None:intergenic | 20.0% |
| !!! | ATTTTAGATGATGAATGTTT+GGG | - | 32564:12638-12657 | MS.gene071505:intron | 20.0% |
| !!! | TATTTTAGATGATGAATGTT+TGG | - | 32564:12637-12656 | MS.gene071505:intron | 20.0% |
| ! | CAATATATGTCTATCAACAT+AGG | + | 32564:12729-12748 | None:intergenic | 25.0% |
| ! | CTCATATCAATAACATCTAT+GGG | + | 32564:12233-12252 | None:intergenic | 25.0% |
| ! | GCATTATATTTAACCTATGA+AGG | + | 32564:13350-13369 | None:intergenic | 25.0% |
| ! | GTTAGAAAAAGGAAAATATC+CGG | - | 32564:13499-13518 | MS.gene071505:CDS | 25.0% |
| ! | TAAACTAATTGCATAGAGAT+GGG | - | 32564:12439-12458 | MS.gene071505:intron | 25.0% |
| ! | TCATATCAATAACATCTATG+GGG | + | 32564:12232-12251 | None:intergenic | 25.0% |
| ! | TCATCATAATCAATGTTAAC+TGG | + | 32564:13389-13408 | None:intergenic | 25.0% |
| ! | TCTCATATCAATAACATCTA+TGG | + | 32564:12234-12253 | None:intergenic | 25.0% |
| ! | TGGAGTTTAATGTTAGAAAA+AGG | - | 32564:13488-13507 | MS.gene071505:CDS | 25.0% |
| ! | TTGTTGAAAAAGACACTAAT+AGG | + | 32564:12111-12130 | None:intergenic | 25.0% |
| ! | TTTCTTACAATAGGACTAAT+TGG | + | 32564:11698-11717 | None:intergenic | 25.0% |
| AAAAGACACTAATAGGAACT+CGG | + | 32564:12104-12123 | None:intergenic | 30.0% | |
| AACTACAATACTATATGCTG+TGG | + | 32564:12158-12177 | None:intergenic | 30.0% | |
| AAGTTTGAATATCATGTCCT+TGG | + | 32564:12511-12530 | None:intergenic | 30.0% | |
| ACATCGTCTTACTTGAAAAA+TGG | - | 32564:11209-11228 | MS.gene071505:CDS | 30.0% | |
| ACTACAATACTATATGCTGT+GGG | + | 32564:12157-12176 | None:intergenic | 30.0% | |
| AGCATACACTTTCTTACAAT+AGG | + | 32564:11707-11726 | None:intergenic | 30.0% | |
| ATTTAACCTATGAAGGAAAC+TGG | + | 32564:13343-13362 | None:intergenic | 30.0% | |
| CAAACATATCTCGCAAATTT+AGG | + | 32564:11932-11951 | None:intergenic | 30.0% | |
| CATATCAATAACATCTATGG+GGG | + | 32564:12231-12250 | None:intergenic | 30.0% | |
| CTAAACTAATTGCATAGAGA+TGG | - | 32564:12438-12457 | MS.gene071505:intron | 30.0% | |
| CTCAAACATTTGAAAACTCA+AGG | + | 32564:13075-13094 | None:intergenic | 30.0% | |
| TCTTAAAAGCTAGCTATCAA+GGG | - | 32564:11979-11998 | MS.gene071505:intron | 30.0% | |
| TCTTACATGACATTGTTTGA+AGG | - | 32564:12555-12574 | MS.gene071505:intron | 30.0% | |
| TTGTATATCAGGTTATGCTT+TGG | - | 32564:11413-11432 | MS.gene071505:intron | 30.0% | |
| ! | CATCTCTATGCAATTAGTTT+AGG | + | 32564:12440-12459 | None:intergenic | 30.0% |
| ! | TGATCTAGAATTATGGCTAA+AGG | - | 32564:12357-12376 | MS.gene071505:CDS | 30.0% |
| !! | ACAGATTCTAGCTTAACAAA+TGG | - | 32564:13140-13159 | MS.gene071505:intron | 30.0% |
| !!! | AGTTTTTTTGCACTTCTTCT+TGG | - | 32564:12384-12403 | MS.gene071505:intron | 30.0% |
| !!! | TTTTTCAAGTAAGACGATGT+TGG | + | 32564:11209-11228 | None:intergenic | 30.0% |
| !!! | TTTTTTCCAAGAACGGTTTT+GGG | + | 32564:12833-12852 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCAAGAACGGTTT+TGG | + | 32564:12834-12853 | None:intergenic | 30.0% |
| AAAGACACTAATAGGAACTC+GGG | + | 32564:12103-12122 | None:intergenic | 35.0% | |
| AACAATTACACTTGAACCAC+TGG | - | 32564:11496-11515 | MS.gene071505:intron | 35.0% | |
| AAGATAACTGCTGGTATTAC+AGG | - | 32564:13454-13473 | MS.gene071505:CDS | 35.0% | |
| AATATCACTACCATTAGACG+TGG | + | 32564:12913-12932 | None:intergenic | 35.0% | |
| AATTCCATATGACATGCACA+CGG | + | 32564:11894-11913 | None:intergenic | 35.0% | |
| AATTCTAGATCATCAGGGTT+TGG | + | 32564:12349-12368 | None:intergenic | 35.0% | |
| ACAATTACACTTGAACCACT+GGG | - | 32564:11497-11516 | MS.gene071505:intron | 35.0% | |
| ACTTAACCAGTTTCCTTCAT+AGG | - | 32564:13334-13353 | MS.gene071505:intron | 35.0% | |
| ACTTGATGTGCTAAGTAGTA+TGG | + | 32564:12042-12061 | None:intergenic | 35.0% | |
| AGCCATAATTCTAGATCATC+AGG | + | 32564:12355-12374 | None:intergenic | 35.0% | |
| ATTGAGTACCCTCGATAATA+AGG | - | 32564:12688-12707 | MS.gene071505:intron | 35.0% | |
| CTCTTAAAAGCTAGCTATCA+AGG | - | 32564:11978-11997 | MS.gene071505:intron | 35.0% | |
| CTTAAAAGCTAGCTATCAAG+GGG | - | 32564:11980-11999 | MS.gene071505:intron | 35.0% | |
| GAAATGATTCCACTTTGTCT+TGG | - | 32564:11774-11793 | MS.gene071505:intron | 35.0% | |
| GCCATAATTCTAGATCATCA+GGG | + | 32564:12354-12373 | None:intergenic | 35.0% | |
| TCGTCTTACTTGAAAAATGG+CGG | - | 32564:11212-11231 | MS.gene071505:CDS | 35.0% | |
| TGAAACAATCCAAGACAAAG+TGG | + | 32564:11786-11805 | None:intergenic | 35.0% | |
| TGTAGGTAGATGAGGAAATT+CGG | - | 32564:12472-12491 | MS.gene071505:intron | 35.0% | |
| TTAAAAGCTAGCTATCAAGG+GGG | - | 32564:11981-12000 | MS.gene071505:intron | 35.0% | |
| TTCAACTTACCTAAGTCACA+AGG | + | 32564:13221-13240 | None:intergenic | 35.0% | |
| ! | ACCCTGATGATCTAGAATTA+TGG | - | 32564:12350-12369 | MS.gene071505:CDS | 35.0% |
| ! | ACGTCTAATGGTAGTGATAT+TGG | - | 32564:12912-12931 | MS.gene071505:intron | 35.0% |
| ! | ATCTTTTGACCTTCTTTCAC+AGG | + | 32564:13439-13458 | None:intergenic | 35.0% |
| ! | CATTGATTATGATGATGTGC+AGG | - | 32564:13394-13413 | MS.gene071505:CDS | 35.0% |
| ! | TCTTTTGACCTTCTTTCACA+GGG | + | 32564:13438-13457 | None:intergenic | 35.0% |
| ! | TTTTTCCAAGAACGGTTTTG+GGG | + | 32564:12832-12851 | None:intergenic | 35.0% |
| !!! | GATAGCTAGCTTTTAAGAGA+GGG | + | 32564:11977-11996 | None:intergenic | 35.0% |
| !!! | TGATAGCTAGCTTTTAAGAG+AGG | + | 32564:11978-11997 | None:intergenic | 35.0% |
| AAGTATACGAGCCTTTGCAA+AGG | - | 32564:12763-12782 | MS.gene071505:intron | 40.0% | |
| AATGATATGAGCTGCCAAGT+GGG | + | 32564:13005-13024 | None:intergenic | 40.0% | |
| ACATCAAGTATCAAGTCACG+TGG | - | 32564:12053-12072 | MS.gene071505:intron | 40.0% | |
| ACCCTCGATAATAAGGTCTT+GGG | - | 32564:12695-12714 | MS.gene071505:intron | 40.0% | |
| ACCTGCAGACTAACAACAAA+AGG | + | 32564:11636-11655 | None:intergenic | 40.0% | |
| AGAAACATCACGAGCTTTCT+TGG | + | 32564:11303-11322 | None:intergenic | 40.0% | |
| ATTCCATATGACATGCACAC+GGG | + | 32564:11893-11912 | None:intergenic | 40.0% | |
| ATTTGCTTCGAGATCATGCT+TGG | - | 32564:12943-12962 | MS.gene071505:intron | 40.0% | |
| CATACTTATGTACATCCCAG+TGG | + | 32564:11515-11534 | None:intergenic | 40.0% | |
| CCTGCAGACTAACAACAAAA+GGG | + | 32564:11635-11654 | None:intergenic | 40.0% | |
| CTTACTACGAGCATTACTTG+TGG | - | 32564:13300-13319 | MS.gene071505:intron | 40.0% | |
| GAAGGAGATGTCATTCTAAC+TGG | - | 32564:12573-12592 | MS.gene071505:intron | 40.0% | |
| GAAGGTCAAAAGATAACTGC+TGG | - | 32564:13445-13464 | MS.gene071505:CDS | 40.0% | |
| GAGCTAACTTGACTCACTTT+CGG | + | 32564:12977-12996 | None:intergenic | 40.0% | |
| GCACTTCTTCTTGGATACTT+TGG | - | 32564:12393-12412 | MS.gene071505:intron | 40.0% | |
| GCATGATCTCGAAGCAAATA+AGG | + | 32564:12942-12961 | None:intergenic | 40.0% | |
| GCTAAGTAGTATGGAATGCT+CGG | + | 32564:12033-12052 | None:intergenic | 40.0% | |
| GCTGAAATACCTTGTGACTT+AGG | - | 32564:13209-13228 | MS.gene071505:intron | 40.0% | |
| TAATGATATGAGCTGCCAAG+TGG | + | 32564:13006-13025 | None:intergenic | 40.0% | |
| TAATTGGTGTGAACGTATCC+TGG | + | 32564:11682-11701 | None:intergenic | 40.0% | |
| TACCCTCGATAATAAGGTCT+TGG | - | 32564:12694-12713 | MS.gene071505:intron | 40.0% | |
| TATACCAGCAACGTAATCCA+TGG | + | 32564:11336-11355 | None:intergenic | 40.0% | |
| TATCAAGTCACGTGGATACT+CGG | - | 32564:12061-12080 | MS.gene071505:intron | 40.0% | |
| TCAACTGAACCAACACTTGA+TGG | + | 32564:12664-12683 | None:intergenic | 40.0% | |
| TGTAGACCAAGTGCTTGTAA+AGG | + | 32564:11857-11876 | None:intergenic | 40.0% | |
| TTACCACAAGCAATGAGTCA+TGG | - | 32564:12204-12223 | MS.gene071505:CDS | 40.0% | |
| TTACCTTAGCAGCAGATTGA+AGG | + | 32564:11461-11480 | None:intergenic | 40.0% | |
| TTTGCTTCGAGATCATGCTT+GGG | - | 32564:12944-12963 | MS.gene071505:intron | 40.0% | |
| ! | AGATGGGTTTGCTTTGTTGT+AGG | - | 32564:12455-12474 | MS.gene071505:intron | 40.0% |
| ! | TGCTTTGTTGTAGGTAGATG+AGG | - | 32564:12464-12483 | MS.gene071505:intron | 40.0% |
| !! | CAAGTGTTGGTTCAGTTGAT+TGG | - | 32564:12665-12684 | MS.gene071505:intron | 40.0% |
| !! | GTTGGTTTGAGAAACAACAC+TGG | + | 32564:11191-11210 | None:intergenic | 40.0% |
| ACCCCAAGACCTTATTATCG+AGG | + | 32564:12700-12719 | None:intergenic | 45.0% | |
| AGATGAGGAAATTCGGCAGA+AGG | - | 32564:12479-12498 | MS.gene071505:intron | 45.0% | |
| AGTTAGCCGAGCTTGATCTT+AGG | - | 32564:13267-13286 | MS.gene071505:CDS | 45.0% | |
| ATAGGAACTCGGGTATTACG+CGG | + | 32564:12093-12112 | None:intergenic | 45.0% | |
| ATCAAGTCACGTGGATACTC+GGG | - | 32564:12062-12081 | MS.gene071505:intron | 45.0% | |
| ATCAGGTTATGCTTTGGCAC+TGG | - | 32564:11419-11438 | MS.gene071505:intron | 45.0% | |
| ATGTTTGGGCCATCAAGTGT+TGG | - | 32564:12652-12671 | MS.gene071505:intron | 45.0% | |
| CAAGCCATGATCCTTTGCAA+AGG | + | 32564:12777-12796 | None:intergenic | 45.0% | |
| CCCCAAGACCTTATTATCGA+GGG | + | 32564:12699-12718 | None:intergenic | 45.0% | |
| CCCTCGATAATAAGGTCTTG+GGG | - | 32564:12696-12715 | MS.gene071505:intron | 45.0% | |
| CCTAAGCCTAAGATCAAGCT+CGG | + | 32564:13276-13295 | None:intergenic | 45.0% | |
| CTTCCATGGAGTTTGGCAAA+AGG | - | 32564:11656-11675 | MS.gene071505:intron | 45.0% | |
| GAAGAGTTAGCCACGTCTAA+TGG | - | 32564:12900-12919 | MS.gene071505:intron | 45.0% | |
| GATGAGGAAATTCGGCAGAA+GGG | - | 32564:12480-12499 | MS.gene071505:intron | 45.0% | |
| TGATCGCCTTTACAAGCACT+TGG | - | 32564:11848-11867 | MS.gene071505:intron | 45.0% | |
| TTACCCGTGTGCATGTCATA+TGG | - | 32564:11887-11906 | MS.gene071505:intron | 45.0% | |
| TTGCTTCGAGATCATGCTTG+GGG | - | 32564:12945-12964 | MS.gene071505:intron | 45.0% | |
| ! | TGTTTCTGAATCCTCTGCCA+TGG | - | 32564:11316-11335 | MS.gene071505:intron | 45.0% |
| !!! | AAGAACGGTTTTGGGGAGAA+GGG | + | 32564:12825-12844 | None:intergenic | 45.0% |
| !!! | CCCTTTTGTTGTTAGTCTGC+AGG | - | 32564:11632-11651 | MS.gene071505:intron | 45.0% |
| AGCAACGTAATCCATGGCAG+AGG | + | 32564:11330-11349 | None:intergenic | 50.0% | |
| AGCTTTCTTGGCGATGACGA+CGG | + | 32564:11291-11310 | None:intergenic | 50.0% | |
| ATGGAGTTTGGCAAAAGGCC+AGG | - | 32564:11661-11680 | MS.gene071505:intron | 50.0% | |
| CATTAAACTCCACGTCCACG+AGG | + | 32564:13480-13499 | None:intergenic | 50.0% | |
| CCGAGCTTGATCTTAGGCTT+AGG | - | 32564:13273-13292 | MS.gene071505:intron | 50.0% | |
| CGAGCCTTTGCAAAGGATCA+TGG | - | 32564:12770-12789 | MS.gene071505:intron | 50.0% | |
| CTTCTCCCCAAAACCGTTCT+TGG | - | 32564:12824-12843 | MS.gene071505:intron | 50.0% | |
| GGACCATGACTCATTGCTTG+TGG | + | 32564:12210-12229 | None:intergenic | 50.0% | |
| GGACCTTCAATCTGCTGCTA+AGG | - | 32564:11455-11474 | MS.gene071505:intron | 50.0% | |
| TCGAGATCATGCTTGGGGAT+GGG | - | 32564:12950-12969 | MS.gene071505:intron | 50.0% | |
| TGCAGGTCTTCCATGGAGTT+TGG | - | 32564:11649-11668 | MS.gene071505:intron | 50.0% | |
| TGGAGAGAACTCTCGTTGTG+TGG | + | 32564:11251-11270 | None:intergenic | 50.0% | |
| TTCGAGATCATGCTTGGGGA+TGG | - | 32564:12949-12968 | MS.gene071505:intron | 50.0% | |
| ! | AGGGTTTGGTACTGCAGTCT+TGG | + | 32564:12335-12354 | None:intergenic | 50.0% |
| ! | GGCACTGGATATGACTGCTA+GGG | - | 32564:11434-11453 | MS.gene071505:intron | 50.0% |
| ! | GGGTTTGGTACTGCAGTCTT+GGG | + | 32564:12334-12353 | None:intergenic | 50.0% |
| ! | GGTAGAGTATCCACGTGACT+TGG | + | 32564:12012-12031 | None:intergenic | 50.0% |
| ! | GTTAGTCTGCAGGTCTTCCA+TGG | - | 32564:11642-11661 | MS.gene071505:intron | 50.0% |
| ! | TCTGCCATGGATTACGTTGC+TGG | - | 32564:11329-11348 | MS.gene071505:intron | 50.0% |
| ! | TGGCACTGGATATGACTGCT+AGG | - | 32564:11433-11452 | MS.gene071505:intron | 50.0% |
| ! | TGGCCTTTTGCCAAACTCCA+TGG | + | 32564:11662-11681 | None:intergenic | 50.0% |
| !!! | CAAGAACGGTTTTGGGGAGA+AGG | + | 32564:12826-12845 | None:intergenic | 50.0% |
| AGTTAGCTCCTGTGCCCACT+TGG | - | 32564:12988-13007 | MS.gene071505:intron | 55.0% | |
| CGAGATCATGCTTGGGGATG+GGG | - | 32564:12951-12970 | MS.gene071505:intron | 55.0% | |
| CTTGTCGCGCTCTTGGAAAC+GGG | - | 32564:12793-12812 | MS.gene071505:intron | 55.0% | |
| GCTTGTCGCGCTCTTGGAAA+CGG | - | 32564:12792-12811 | MS.gene071505:intron | 55.0% | |
| TATTACAGGCCTCGTGGACG+TGG | - | 32564:13468-13487 | MS.gene071505:CDS | 55.0% | |
| TCTTTCACAGGGCCAACACC+CGG | + | 32564:13427-13446 | None:intergenic | 55.0% | |
| TGCTGGTATTACAGGCCTCG+TGG | - | 32564:13462-13481 | MS.gene071505:CDS | 55.0% | |
| ! | ATCATGGCTTGTCGCGCTCT+TGG | - | 32564:12786-12805 | MS.gene071505:intron | 55.0% |
| !! | GGTGTTGGCCCTGTGAAAGA+AGG | - | 32564:13427-13446 | MS.gene071505:CDS | 55.0% |
| !!! | AACGGTTTTGGGGAGAAGGG+AGG | + | 32564:12822-12841 | None:intergenic | 55.0% |
| ATGAGCTGCCAAGTGGGCAC+AGG | + | 32564:12999-13018 | None:intergenic | 60.0% | |
| ATGATGTGCAGGCACTCCCC+CGG | - | 32564:13405-13424 | MS.gene071505:CDS | 60.0% | |
| CGGCGAGTTCGACTTCGTGA+TGG | + | 32564:11271-11290 | None:intergenic | 60.0% | |
| CTTTCACAGGGCCAACACCC+GGG | + | 32564:13426-13445 | None:intergenic | 60.0% | |
| GGGGGAAGAACCAAGTCACG+TGG | - | 32564:11999-12018 | MS.gene071505:intron | 60.0% | |
| TCGGCAGAAGGGCTCAACCA+AGG | - | 32564:12491-12510 | MS.gene071505:intron | 60.0% | |
| TTTCACAGGGCCAACACCCG+GGG | + | 32564:13425-13444 | None:intergenic | 60.0% | |
| TGATGTGCAGGCACTCCCCC+GGG | - | 32564:13406-13425 | MS.gene071505:CDS | 65.0% | |
| TTCACAGGGCCAACACCCGG+GGG | + | 32564:13424-13443 | None:intergenic | 65.0% | |
| GCAGGCACTCCCCCGGGTGT+TGG | - | 32564:13412-13431 | MS.gene071505:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32564 | gene | 11185 | 13528 | 11185 | ID=MS.gene071505 |
| 32564 | mRNA | 11185 | 13528 | 11185 | ID=MS.gene071505.t1;Parent=MS.gene071505 |
| 32564 | exon | 13363 | 13528 | 13363 | ID=MS.gene071505.t1.exon1;Parent=MS.gene071505.t1 |
| 32564 | CDS | 13363 | 13528 | 13363 | ID=cds.MS.gene071505.t1;Parent=MS.gene071505.t1 |
| 32564 | exon | 13237 | 13289 | 13237 | ID=MS.gene071505.t1.exon2;Parent=MS.gene071505.t1 |
| 32564 | CDS | 13237 | 13289 | 13237 | ID=cds.MS.gene071505.t1;Parent=MS.gene071505.t1 |
| 32564 | exon | 13004 | 13066 | 13004 | ID=MS.gene071505.t1.exon3;Parent=MS.gene071505.t1 |
| 32564 | CDS | 13004 | 13066 | 13004 | ID=cds.MS.gene071505.t1;Parent=MS.gene071505.t1 |
| 32564 | exon | 12335 | 12385 | 12335 | ID=MS.gene071505.t1.exon4;Parent=MS.gene071505.t1 |
| 32564 | CDS | 12335 | 12385 | 12335 | ID=cds.MS.gene071505.t1;Parent=MS.gene071505.t1 |
| 32564 | exon | 12119 | 12236 | 12119 | ID=MS.gene071505.t1.exon5;Parent=MS.gene071505.t1 |
| 32564 | CDS | 12119 | 12236 | 12119 | ID=cds.MS.gene071505.t1;Parent=MS.gene071505.t1 |
| 32564 | exon | 11185 | 11297 | 11185 | ID=MS.gene071505.t1.exon6;Parent=MS.gene071505.t1 |
| 32564 | CDS | 11185 | 11297 | 11185 | ID=cds.MS.gene071505.t1;Parent=MS.gene071505.t1 |
| Gene Sequence |
| Protein sequence |
