Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066362.t1 | XP_013458265.1 | 99.1 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 2.10E-119 | 438.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066362.t1 | Q93ZE5 | 75.8 | 215 | 52 | 0 | 5 | 219 | 4 | 218 | 5.1e-90 | 332.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066362.t1 | A0A072USI0 | 99.1 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 1.5e-119 | 438.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene066362 | 0.815238 | 1.02E-51 | -1.69E-46 |
| MS.gene049424 | MS.gene066362 | 0.808452 | 3.08E-50 | -1.69E-46 |
| MS.gene049951 | MS.gene066362 | 0.806928 | 6.48E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene066362 | 0.809188 | 2.14E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene066362 | 0.834114 | 3.61E-56 | -1.69E-46 |
| MS.gene053216 | MS.gene066362 | 0.820998 | 5.10E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene066362 | 0.824191 | 9.23E-54 | -1.69E-46 |
| MS.gene055441 | MS.gene066362 | 0.802204 | 6.27E-49 | -1.69E-46 |
| MS.gene056849 | MS.gene066362 | 0.816089 | 6.62E-52 | -1.69E-46 |
| MS.gene057108 | MS.gene066362 | 0.800769 | 1.23E-48 | -1.69E-46 |
| MS.gene05795 | MS.gene066362 | 0.803384 | 3.58E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene066362 | 0.811449 | 6.96E-51 | -1.69E-46 |
| MS.gene059899 | MS.gene066362 | 0.805202 | 1.50E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene066362 | 0.827496 | 1.52E-54 | -1.69E-46 |
| MS.gene060297 | MS.gene066362 | 0.846808 | 1.72E-59 | -1.69E-46 |
| MS.gene060940 | MS.gene066362 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene066362 | 0.802107 | 6.56E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene45012 | MS.gene066362 | PPI |
| MS.gene041603 | MS.gene066362 | PPI |
| MS.gene035368 | MS.gene066362 | PPI |
| MS.gene066362 | MS.gene77824 | PPI |
| MS.gene066362 | MS.gene041601 | PPI |
| MS.gene041601 | MS.gene066362 | PPI |
| MS.gene071503 | MS.gene066362 | PPI |
| MS.gene071505 | MS.gene066362 | PPI |
| MS.gene035366 | MS.gene066362 | PPI |
| MS.gene77824 | MS.gene066362 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066362.t1 | MTR_4g120230 | 99.107 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 3.27e-164 | 452 |
| MS.gene066362.t1 | MTR_4g120230 | 98.413 | 189 | 3 | 0 | 1 | 189 | 1 | 189 | 5.35e-137 | 382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066362.t1 | AT4G15940 | 75.349 | 215 | 52 | 1 | 5 | 219 | 4 | 217 | 9.12e-119 | 337 |
| MS.gene066362.t1 | AT3G16700 | 73.488 | 215 | 57 | 0 | 5 | 219 | 4 | 218 | 1.38e-115 | 329 |
| MS.gene066362.t1 | AT3G16700 | 72.414 | 145 | 40 | 0 | 5 | 149 | 4 | 148 | 1.80e-73 | 220 |
| MS.gene066362.t1 | AT3G16700 | 74.286 | 105 | 27 | 0 | 5 | 109 | 4 | 108 | 1.03e-51 | 164 |
| MS.gene066362.t1 | AT3G16700 | 74.286 | 105 | 27 | 0 | 5 | 109 | 4 | 108 | 1.03e-51 | 164 |
Find 0 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCATCTTTATAAAATAT+AGG | - | 32567:8874-8893 | MS.gene066362:CDS | 10.0% |
| !! | TAAAATATTCAATTAATATG+AGG | - | 32567:8996-9015 | MS.gene066362:CDS | 10.0% |
| !!! | TCATATTAATTGAATATTTT+AGG | + | 32567:8997-9016 | None:intergenic | 10.0% |
| !! | ATTTATTATCTTTGTATATC+AGG | - | 32567:7231-7250 | MS.gene066362:intron | 15.0% |
| !!! | AATCAAATTTGAAATTTGAA+AGG | + | 32567:7195-7214 | None:intergenic | 15.0% |
| !!! | TTTAACAAAGTACTTAAAAA+AGG | - | 32567:8930-8949 | MS.gene066362:intron | 15.0% |
| !! | CTTATGAAGCTAATTAAAAA+TGG | + | 32567:8363-8382 | None:intergenic | 20.0% |
| !! | TCTTGGAAAAAAATAAAGTT+TGG | - | 32567:8670-8689 | MS.gene066362:intron | 20.0% |
| !! | TGAATTGAATTGAATTGATT+TGG | + | 32567:6932-6951 | None:intergenic | 20.0% |
| !! | TTAGCAATGTGTTATATTTA+AGG | - | 32567:7394-7413 | MS.gene066362:intron | 20.0% |
| !!! | ACTTTATTTTTTTCCAAGAA+CGG | + | 32567:8669-8688 | None:intergenic | 20.0% |
| !!! | ATTTTAGATGATGAATGTTT+GGG | - | 32567:8467-8486 | MS.gene066362:intron | 20.0% |
| !!! | GAATTGAATTGAATTGATTT+GGG | + | 32567:6931-6950 | None:intergenic | 20.0% |
| !!! | TAATTGATTCACTAATTTTC+AGG | - | 32567:6992-7011 | MS.gene066362:intron | 20.0% |
| !!! | TATTTTAGATGATGAATGTT+TGG | - | 32567:8466-8485 | MS.gene066362:intron | 20.0% |
| ! | CAATATATGTCTATCAACAT+AGG | + | 32567:8558-8577 | None:intergenic | 25.0% |
| ! | CTCATATCAATAACATCTAT+GGG | + | 32567:8062-8081 | None:intergenic | 25.0% |
| ! | GCATTATATTTAACCTATGA+AGG | + | 32567:9179-9198 | None:intergenic | 25.0% |
| ! | GTTAGAAAAAGGAAAATATC+CGG | - | 32567:9328-9347 | MS.gene066362:CDS | 25.0% |
| ! | TAAACTAATTGCATAGAGAT+GGG | - | 32567:8268-8287 | MS.gene066362:intron | 25.0% |
| ! | TCATATCAATAACATCTATG+GGG | + | 32567:8061-8080 | None:intergenic | 25.0% |
| ! | TCATCATAATCAATGTTAAC+TGG | + | 32567:9218-9237 | None:intergenic | 25.0% |
| ! | TCTCATATCAATAACATCTA+TGG | + | 32567:8063-8082 | None:intergenic | 25.0% |
| ! | TGGAGTTTAATGTTAGAAAA+AGG | - | 32567:9317-9336 | MS.gene066362:CDS | 25.0% |
| ! | TTGTTGAAAAAGACACTAAT+AGG | + | 32567:7940-7959 | None:intergenic | 25.0% |
| ! | TTTCTTACAATAGGACTAAT+TGG | + | 32567:7527-7546 | None:intergenic | 25.0% |
| AAAAGACACTAATAGGAACT+CGG | + | 32567:7933-7952 | None:intergenic | 30.0% | |
| AACTACAATACTATATGCTG+TGG | + | 32567:7987-8006 | None:intergenic | 30.0% | |
| AAGTTTGAATATCATGTCCT+TGG | + | 32567:8340-8359 | None:intergenic | 30.0% | |
| ACATCGTCTTACTTGAAAAA+TGG | - | 32567:7038-7057 | MS.gene066362:intron | 30.0% | |
| ACTACAATACTATATGCTGT+GGG | + | 32567:7986-8005 | None:intergenic | 30.0% | |
| AGCATACACTTTCTTACAAT+AGG | + | 32567:7536-7555 | None:intergenic | 30.0% | |
| ATTTAACCTATGAAGGAAAC+TGG | + | 32567:9172-9191 | None:intergenic | 30.0% | |
| CAAACATATCTCGCAAATTT+AGG | + | 32567:7761-7780 | None:intergenic | 30.0% | |
| CAGATTAGGAAATTTGAGAA+AGG | + | 32567:6957-6976 | None:intergenic | 30.0% | |
| CATATCAATAACATCTATGG+GGG | + | 32567:8060-8079 | None:intergenic | 30.0% | |
| CTAAACTAATTGCATAGAGA+TGG | - | 32567:8267-8286 | MS.gene066362:intron | 30.0% | |
| CTCAAACATTTGAAAACTCA+AGG | + | 32567:8904-8923 | None:intergenic | 30.0% | |
| GAATCAATTACTACAGTACA+CGG | + | 32567:6982-7001 | None:intergenic | 30.0% | |
| TCTTAAAAGCTAGCTATCAA+GGG | - | 32567:7808-7827 | MS.gene066362:CDS | 30.0% | |
| TCTTACATGACATTGTTTGA+AGG | - | 32567:8384-8403 | MS.gene066362:intron | 30.0% | |
| TTGTATATCAGGTTATGCTT+TGG | - | 32567:7242-7261 | MS.gene066362:intron | 30.0% | |
| TTGTCAGAAACTCTTTGATT+TGG | - | 32567:6815-6834 | MS.gene066362:CDS | 30.0% | |
| ! | CATCTCTATGCAATTAGTTT+AGG | + | 32567:8269-8288 | None:intergenic | 30.0% |
| ! | TGATCTAGAATTATGGCTAA+AGG | - | 32567:8186-8205 | MS.gene066362:intron | 30.0% |
| ! | TGTCAGAAACTCTTTGATTT+GGG | - | 32567:6816-6835 | MS.gene066362:CDS | 30.0% |
| !! | ACAGATTCTAGCTTAACAAA+TGG | - | 32567:8969-8988 | MS.gene066362:intron | 30.0% |
| !!! | AGTTTTTTTGCACTTCTTCT+TGG | - | 32567:8213-8232 | MS.gene066362:intron | 30.0% |
| !!! | TTTTTCAAGTAAGACGATGT+TGG | + | 32567:7038-7057 | None:intergenic | 30.0% |
| !!! | TTTTTTCCAAGAACGGTTTT+GGG | + | 32567:8662-8681 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCAAGAACGGTTT+TGG | + | 32567:8663-8682 | None:intergenic | 30.0% |
| AAAGACACTAATAGGAACTC+GGG | + | 32567:7932-7951 | None:intergenic | 35.0% | |
| AACAATTACACTTGAACCAC+TGG | - | 32567:7325-7344 | MS.gene066362:intron | 35.0% | |
| AAGATAACTGCTGGTATTAC+AGG | - | 32567:9283-9302 | MS.gene066362:CDS | 35.0% | |
| AATATCACTACCATTAGACG+TGG | + | 32567:8742-8761 | None:intergenic | 35.0% | |
| AATTCCATATGACATGCACA+CGG | + | 32567:7723-7742 | None:intergenic | 35.0% | |
| AATTCTAGATCATCAGGGTT+TGG | + | 32567:8178-8197 | None:intergenic | 35.0% | |
| ACAATTACACTTGAACCACT+GGG | - | 32567:7326-7345 | MS.gene066362:intron | 35.0% | |
| ACTTAACCAGTTTCCTTCAT+AGG | - | 32567:9163-9182 | MS.gene066362:intron | 35.0% | |
| ACTTGATGTGCTAAGTAGTA+TGG | + | 32567:7871-7890 | None:intergenic | 35.0% | |
| AGCCATAATTCTAGATCATC+AGG | + | 32567:8184-8203 | None:intergenic | 35.0% | |
| ATTGAGTACCCTCGATAATA+AGG | - | 32567:8517-8536 | MS.gene066362:intron | 35.0% | |
| CTCTTAAAAGCTAGCTATCA+AGG | - | 32567:7807-7826 | MS.gene066362:CDS | 35.0% | |
| CTTAAAAGCTAGCTATCAAG+GGG | - | 32567:7809-7828 | MS.gene066362:CDS | 35.0% | |
| GAAATGATTCCACTTTGTCT+TGG | - | 32567:7603-7622 | MS.gene066362:intron | 35.0% | |
| GCCATAATTCTAGATCATCA+GGG | + | 32567:8183-8202 | None:intergenic | 35.0% | |
| TCGTCTTACTTGAAAAATGG+CGG | - | 32567:7041-7060 | MS.gene066362:intron | 35.0% | |
| TGAAACAATCCAAGACAAAG+TGG | + | 32567:7615-7634 | None:intergenic | 35.0% | |
| TGTAGGTAGATGAGGAAATT+CGG | - | 32567:8301-8320 | MS.gene066362:intron | 35.0% | |
| TTAAAAGCTAGCTATCAAGG+GGG | - | 32567:7810-7829 | MS.gene066362:CDS | 35.0% | |
| TTCAACTTACCTAAGTCACA+AGG | + | 32567:9050-9069 | None:intergenic | 35.0% | |
| ! | ACCCTGATGATCTAGAATTA+TGG | - | 32567:8179-8198 | MS.gene066362:intron | 35.0% |
| ! | ACGTCTAATGGTAGTGATAT+TGG | - | 32567:8741-8760 | MS.gene066362:intron | 35.0% |
| ! | ATCTTTTGACCTTCTTTCAC+AGG | + | 32567:9268-9287 | None:intergenic | 35.0% |
| ! | CATTGATTATGATGATGTGC+AGG | - | 32567:9223-9242 | MS.gene066362:intron | 35.0% |
| ! | TCTTTTGACCTTCTTTCACA+GGG | + | 32567:9267-9286 | None:intergenic | 35.0% |
| ! | TTTTTCCAAGAACGGTTTTG+GGG | + | 32567:8661-8680 | None:intergenic | 35.0% |
| !!! | GATAGCTAGCTTTTAAGAGA+GGG | + | 32567:7806-7825 | None:intergenic | 35.0% |
| !!! | TGATAGCTAGCTTTTAAGAG+AGG | + | 32567:7807-7826 | None:intergenic | 35.0% |
| AAGTATACGAGCCTTTGCAA+AGG | - | 32567:8592-8611 | MS.gene066362:intron | 40.0% | |
| AATGATATGAGCTGCCAAGT+GGG | + | 32567:8834-8853 | None:intergenic | 40.0% | |
| ACATCAAGTATCAAGTCACG+TGG | - | 32567:7882-7901 | MS.gene066362:intron | 40.0% | |
| ACCCTCGATAATAAGGTCTT+GGG | - | 32567:8524-8543 | MS.gene066362:intron | 40.0% | |
| ACCTGCAGACTAACAACAAA+AGG | + | 32567:7465-7484 | None:intergenic | 40.0% | |
| AGAAACATCACGAGCTTTCT+TGG | + | 32567:7132-7151 | None:intergenic | 40.0% | |
| ATTCCATATGACATGCACAC+GGG | + | 32567:7722-7741 | None:intergenic | 40.0% | |
| ATTTGCTTCGAGATCATGCT+TGG | - | 32567:8772-8791 | MS.gene066362:intron | 40.0% | |
| CATACTTATGTACATCCCAG+TGG | + | 32567:7344-7363 | None:intergenic | 40.0% | |
| CCTGCAGACTAACAACAAAA+GGG | + | 32567:7464-7483 | None:intergenic | 40.0% | |
| CTTACTACGAGCATTACTTG+TGG | - | 32567:9129-9148 | MS.gene066362:intron | 40.0% | |
| GAAGGAGATGTCATTCTAAC+TGG | - | 32567:8402-8421 | MS.gene066362:intron | 40.0% | |
| GAAGGTCAAAAGATAACTGC+TGG | - | 32567:9274-9293 | MS.gene066362:CDS | 40.0% | |
| GAGCTAACTTGACTCACTTT+CGG | + | 32567:8806-8825 | None:intergenic | 40.0% | |
| GCACTTCTTCTTGGATACTT+TGG | - | 32567:8222-8241 | MS.gene066362:intron | 40.0% | |
| GCATGATCTCGAAGCAAATA+AGG | + | 32567:8771-8790 | None:intergenic | 40.0% | |
| GCTAAGTAGTATGGAATGCT+CGG | + | 32567:7862-7881 | None:intergenic | 40.0% | |
| GCTGAAATACCTTGTGACTT+AGG | - | 32567:9038-9057 | MS.gene066362:CDS | 40.0% | |
| TAATGATATGAGCTGCCAAG+TGG | + | 32567:8835-8854 | None:intergenic | 40.0% | |
| TAATTGGTGTGAACGTATCC+TGG | + | 32567:7511-7530 | None:intergenic | 40.0% | |
| TACAGTACACGGATCAGATT+AGG | + | 32567:6971-6990 | None:intergenic | 40.0% | |
| TACCCTCGATAATAAGGTCT+TGG | - | 32567:8523-8542 | MS.gene066362:intron | 40.0% | |
| TATACCAGCAACGTAATCCA+TGG | + | 32567:7165-7184 | None:intergenic | 40.0% | |
| TATCAAGTCACGTGGATACT+CGG | - | 32567:7890-7909 | MS.gene066362:intron | 40.0% | |
| TCAACTGAACCAACACTTGA+TGG | + | 32567:8493-8512 | None:intergenic | 40.0% | |
| TGTAGACCAAGTGCTTGTAA+AGG | + | 32567:7686-7705 | None:intergenic | 40.0% | |
| TTACCACAAGCAATGAGTCA+TGG | - | 32567:8033-8052 | MS.gene066362:intron | 40.0% | |
| TTACCTTAGCAGCAGATTGA+AGG | + | 32567:7290-7309 | None:intergenic | 40.0% | |
| TTTGCTTCGAGATCATGCTT+GGG | - | 32567:8773-8792 | MS.gene066362:intron | 40.0% | |
| ! | AAGAGTGTGTTTGTGACCTT+GGG | + | 32567:6906-6925 | None:intergenic | 40.0% |
| ! | AGATGGGTTTGCTTTGTTGT+AGG | - | 32567:8284-8303 | MS.gene066362:intron | 40.0% |
| ! | TGCTTTGTTGTAGGTAGATG+AGG | - | 32567:8293-8312 | MS.gene066362:intron | 40.0% |
| !! | CAAGTGTTGGTTCAGTTGAT+TGG | - | 32567:8494-8513 | MS.gene066362:intron | 40.0% |
| !! | GTTGGTTTGAGAAACAACAC+TGG | + | 32567:7020-7039 | None:intergenic | 40.0% |
| ACCCCAAGACCTTATTATCG+AGG | + | 32567:8529-8548 | None:intergenic | 45.0% | |
| AGATGAGGAAATTCGGCAGA+AGG | - | 32567:8308-8327 | MS.gene066362:intron | 45.0% | |
| AGTTAGCCGAGCTTGATCTT+AGG | - | 32567:9096-9115 | MS.gene066362:CDS | 45.0% | |
| ATAGGAACTCGGGTATTACG+CGG | + | 32567:7922-7941 | None:intergenic | 45.0% | |
| ATCAAGTCACGTGGATACTC+GGG | - | 32567:7891-7910 | MS.gene066362:intron | 45.0% | |
| ATCAGGTTATGCTTTGGCAC+TGG | - | 32567:7248-7267 | MS.gene066362:intron | 45.0% | |
| ATGTTTGGGCCATCAAGTGT+TGG | - | 32567:8481-8500 | MS.gene066362:intron | 45.0% | |
| CAAGCCATGATCCTTTGCAA+AGG | + | 32567:8606-8625 | None:intergenic | 45.0% | |
| CCCCAAGACCTTATTATCGA+GGG | + | 32567:8528-8547 | None:intergenic | 45.0% | |
| CCCTCGATAATAAGGTCTTG+GGG | - | 32567:8525-8544 | MS.gene066362:intron | 45.0% | |
| CCTAAGCCTAAGATCAAGCT+CGG | + | 32567:9105-9124 | None:intergenic | 45.0% | |
| CTTCCATGGAGTTTGGCAAA+AGG | - | 32567:7485-7504 | MS.gene066362:intron | 45.0% | |
| GAAGAGTTAGCCACGTCTAA+TGG | - | 32567:8729-8748 | MS.gene066362:intron | 45.0% | |
| GATGAGGAAATTCGGCAGAA+GGG | - | 32567:8309-8328 | MS.gene066362:intron | 45.0% | |
| GATTTGGGCACGAAGATCAT+CGG | - | 32567:6831-6850 | MS.gene066362:CDS | 45.0% | |
| GCTGCTCATGCTAAAGAACT+AGG | - | 32567:6870-6889 | MS.gene066362:CDS | 45.0% | |
| TGATCGCCTTTACAAGCACT+TGG | - | 32567:7677-7696 | MS.gene066362:intron | 45.0% | |
| TGTGTTTGTGACCTTGGGAA+CGG | + | 32567:6901-6920 | None:intergenic | 45.0% | |
| TTACCCGTGTGCATGTCATA+TGG | - | 32567:7716-7735 | MS.gene066362:intron | 45.0% | |
| TTGCTTCGAGATCATGCTTG+GGG | - | 32567:8774-8793 | MS.gene066362:intron | 45.0% | |
| ! | GAAGAGTGTGTTTGTGACCT+TGG | + | 32567:6907-6926 | None:intergenic | 45.0% |
| ! | TGTTTCTGAATCCTCTGCCA+TGG | - | 32567:7145-7164 | MS.gene066362:intron | 45.0% |
| !!! | AAGAACGGTTTTGGGGAGAA+GGG | + | 32567:8654-8673 | None:intergenic | 45.0% |
| !!! | CCCTTTTGTTGTTAGTCTGC+AGG | - | 32567:7461-7480 | MS.gene066362:intron | 45.0% |
| AGCAACGTAATCCATGGCAG+AGG | + | 32567:7159-7178 | None:intergenic | 50.0% | |
| AGCTTTCTTGGCGATGACGA+CGG | + | 32567:7120-7139 | None:intergenic | 50.0% | |
| ATGGAGTTTGGCAAAAGGCC+AGG | - | 32567:7490-7509 | MS.gene066362:intron | 50.0% | |
| CATTAAACTCCACGTCCACG+AGG | + | 32567:9309-9328 | None:intergenic | 50.0% | |
| CCGAGCTTGATCTTAGGCTT+AGG | - | 32567:9102-9121 | MS.gene066362:CDS | 50.0% | |
| CGAGCCTTTGCAAAGGATCA+TGG | - | 32567:8599-8618 | MS.gene066362:intron | 50.0% | |
| CTTCTCCCCAAAACCGTTCT+TGG | - | 32567:8653-8672 | MS.gene066362:CDS | 50.0% | |
| GGACCATGACTCATTGCTTG+TGG | + | 32567:8039-8058 | None:intergenic | 50.0% | |
| GGACCTTCAATCTGCTGCTA+AGG | - | 32567:7284-7303 | MS.gene066362:intron | 50.0% | |
| TCGAGATCATGCTTGGGGAT+GGG | - | 32567:8779-8798 | MS.gene066362:intron | 50.0% | |
| TGCAGGTCTTCCATGGAGTT+TGG | - | 32567:7478-7497 | MS.gene066362:intron | 50.0% | |
| TGGAGAGAACTCTCGTTGTG+TGG | + | 32567:7080-7099 | None:intergenic | 50.0% | |
| TTCGAGATCATGCTTGGGGA+TGG | - | 32567:8778-8797 | MS.gene066362:intron | 50.0% | |
| ! | AGGGTTTGGTACTGCAGTCT+TGG | + | 32567:8164-8183 | None:intergenic | 50.0% |
| ! | GGCACTGGATATGACTGCTA+GGG | - | 32567:7263-7282 | MS.gene066362:intron | 50.0% |
| ! | GGGTTTGGTACTGCAGTCTT+GGG | + | 32567:8163-8182 | None:intergenic | 50.0% |
| ! | GGTAGAGTATCCACGTGACT+TGG | + | 32567:7841-7860 | None:intergenic | 50.0% |
| ! | GTTAGTCTGCAGGTCTTCCA+TGG | - | 32567:7471-7490 | MS.gene066362:intron | 50.0% |
| ! | TCTGCCATGGATTACGTTGC+TGG | - | 32567:7158-7177 | MS.gene066362:intron | 50.0% |
| ! | TGGCACTGGATATGACTGCT+AGG | - | 32567:7262-7281 | MS.gene066362:intron | 50.0% |
| ! | TGGCCTTTTGCCAAACTCCA+TGG | + | 32567:7491-7510 | None:intergenic | 50.0% |
| !!! | CAAGAACGGTTTTGGGGAGA+AGG | + | 32567:8655-8674 | None:intergenic | 50.0% |
| AGTTAGCTCCTGTGCCCACT+TGG | - | 32567:8817-8836 | MS.gene066362:intron | 55.0% | |
| CGAGATCATGCTTGGGGATG+GGG | - | 32567:8780-8799 | MS.gene066362:intron | 55.0% | |
| CTTGTCGCGCTCTTGGAAAC+GGG | - | 32567:8622-8641 | MS.gene066362:CDS | 55.0% | |
| GCTTGTCGCGCTCTTGGAAA+CGG | - | 32567:8621-8640 | MS.gene066362:CDS | 55.0% | |
| TATTACAGGCCTCGTGGACG+TGG | - | 32567:9297-9316 | MS.gene066362:CDS | 55.0% | |
| TCTTTCACAGGGCCAACACC+CGG | + | 32567:9256-9275 | None:intergenic | 55.0% | |
| TGCTGGTATTACAGGCCTCG+TGG | - | 32567:9291-9310 | MS.gene066362:CDS | 55.0% | |
| ! | ATCATGGCTTGTCGCGCTCT+TGG | - | 32567:8615-8634 | MS.gene066362:intron | 55.0% |
| !! | GGTGTTGGCCCTGTGAAAGA+AGG | - | 32567:9256-9275 | MS.gene066362:CDS | 55.0% |
| !!! | AACGGTTTTGGGGAGAAGGG+AGG | + | 32567:8651-8670 | None:intergenic | 55.0% |
| ACTAGGCAACGCCGTTCCCA+AGG | - | 32567:6887-6906 | MS.gene066362:CDS | 60.0% | |
| ATGAGCTGCCAAGTGGGCAC+AGG | + | 32567:8828-8847 | None:intergenic | 60.0% | |
| ATGATGTGCAGGCACTCCCC+CGG | - | 32567:9234-9253 | MS.gene066362:intron | 60.0% | |
| CGGCGAGTTCGACTTCGTGA+TGG | + | 32567:7100-7119 | None:intergenic | 60.0% | |
| CTTTCACAGGGCCAACACCC+GGG | + | 32567:9255-9274 | None:intergenic | 60.0% | |
| GGCACGAAGATCATCGGCGT+CGG | - | 32567:6837-6856 | MS.gene066362:CDS | 60.0% | |
| GGGGGAAGAACCAAGTCACG+TGG | - | 32567:7828-7847 | MS.gene066362:CDS | 60.0% | |
| TCGGCAGAAGGGCTCAACCA+AGG | - | 32567:8320-8339 | MS.gene066362:intron | 60.0% | |
| TTTCACAGGGCCAACACCCG+GGG | + | 32567:9254-9273 | None:intergenic | 60.0% | |
| TGATGTGCAGGCACTCCCCC+GGG | - | 32567:9235-9254 | MS.gene066362:intron | 65.0% | |
| TTCACAGGGCCAACACCCGG+GGG | + | 32567:9253-9272 | None:intergenic | 65.0% | |
| GCAGGCACTCCCCCGGGTGT+TGG | - | 32567:9241-9260 | MS.gene066362:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32567 | gene | 6798 | 9357 | 6798 | ID=MS.gene066362 |
| 32567 | mRNA | 6798 | 9357 | 6798 | ID=MS.gene066362.t1;Parent=MS.gene066362 |
| 32567 | exon | 9247 | 9357 | 9247 | ID=MS.gene066362.t1.exon1;Parent=MS.gene066362.t1 |
| 32567 | CDS | 9247 | 9357 | 9247 | ID=cds.MS.gene066362.t1;Parent=MS.gene066362.t1 |
| 32567 | exon | 8976 | 9141 | 8976 | ID=MS.gene066362.t1.exon2;Parent=MS.gene066362.t1 |
| 32567 | CDS | 8976 | 9141 | 8976 | ID=cds.MS.gene066362.t1;Parent=MS.gene066362.t1 |
| 32567 | exon | 8850 | 8902 | 8850 | ID=MS.gene066362.t1.exon3;Parent=MS.gene066362.t1 |
| 32567 | CDS | 8850 | 8902 | 8850 | ID=cds.MS.gene066362.t1;Parent=MS.gene066362.t1 |
| 32567 | exon | 8617 | 8679 | 8617 | ID=MS.gene066362.t1.exon4;Parent=MS.gene066362.t1 |
| 32567 | CDS | 8617 | 8679 | 8617 | ID=cds.MS.gene066362.t1;Parent=MS.gene066362.t1 |
| 32567 | exon | 7948 | 7998 | 7948 | ID=MS.gene066362.t1.exon5;Parent=MS.gene066362.t1 |
| 32567 | CDS | 7948 | 7998 | 7948 | ID=cds.MS.gene066362.t1;Parent=MS.gene066362.t1 |
| 32567 | exon | 7732 | 7849 | 7732 | ID=MS.gene066362.t1.exon6;Parent=MS.gene066362.t1 |
| 32567 | CDS | 7732 | 7849 | 7732 | ID=cds.MS.gene066362.t1;Parent=MS.gene066362.t1 |
| 32567 | exon | 6798 | 6910 | 6798 | ID=MS.gene066362.t1.exon7;Parent=MS.gene066362.t1 |
| 32567 | CDS | 6798 | 6910 | 6798 | ID=cds.MS.gene066362.t1;Parent=MS.gene066362.t1 |
| Gene Sequence |
| Protein sequence |
