Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041603.t1 | XP_013458265.1 | 99.1 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 2.10E-119 | 438.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041603.t1 | Q93ZE5 | 75.8 | 215 | 52 | 0 | 5 | 219 | 4 | 218 | 5.1e-90 | 332.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041603.t1 | A0A072USI0 | 99.1 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 1.5e-119 | 438.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041603 | MS.gene035366 | PPI |
| MS.gene041603 | MS.gene066362 | PPI |
| MS.gene041603 | MS.gene77824 | PPI |
| MS.gene041603 | MS.gene041601 | PPI |
| MS.gene041603 | MS.gene45012 | PPI |
| MS.gene041603 | MS.gene035368 | PPI |
| MS.gene071505 | MS.gene041603 | PPI |
| MS.gene035366 | MS.gene041603 | PPI |
| MS.gene071503 | MS.gene041603 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041603.t1 | MTR_4g120230 | 99.107 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 3.27e-164 | 452 |
| MS.gene041603.t1 | MTR_4g120230 | 98.413 | 189 | 3 | 0 | 1 | 189 | 1 | 189 | 5.35e-137 | 382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041603.t1 | AT4G15940 | 75.349 | 215 | 52 | 1 | 5 | 219 | 4 | 217 | 9.12e-119 | 337 |
| MS.gene041603.t1 | AT3G16700 | 73.488 | 215 | 57 | 0 | 5 | 219 | 4 | 218 | 1.38e-115 | 329 |
| MS.gene041603.t1 | AT3G16700 | 72.414 | 145 | 40 | 0 | 5 | 149 | 4 | 148 | 1.80e-73 | 220 |
| MS.gene041603.t1 | AT3G16700 | 74.286 | 105 | 27 | 0 | 5 | 109 | 4 | 108 | 1.03e-51 | 164 |
| MS.gene041603.t1 | AT3G16700 | 74.286 | 105 | 27 | 0 | 5 | 109 | 4 | 108 | 1.03e-51 | 164 |
Find 0 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCATCTTTATAAAATAT+AGG | + | 32557:11819-11838 | MS.gene041603:intron | 10.0% |
| !! | TAAAATATTCAATTAATATG+AGG | + | 32557:11941-11960 | MS.gene041603:intron | 10.0% |
| !!! | TCATATTAATTGAATATTTT+AGG | - | 32557:11942-11961 | None:intergenic | 10.0% |
| !! | ATTTATTATCTTTGTATATC+AGG | + | 32557:10176-10195 | MS.gene041603:intron | 15.0% |
| !!! | AATCAAATTTGAAATTTGAA+AGG | - | 32557:10140-10159 | None:intergenic | 15.0% |
| !!! | TTTAACAAAGTACTTAAAAA+AGG | + | 32557:11875-11894 | MS.gene041603:intron | 15.0% |
| !! | CTTATGAAGCTAATTAAAAA+TGG | - | 32557:11308-11327 | None:intergenic | 20.0% |
| !! | TCTTGGAAAAAAATAAAGTT+TGG | + | 32557:11615-11634 | MS.gene041603:intron | 20.0% |
| !! | TGAATTGAATTGAATTGATT+TGG | - | 32557:9877-9896 | None:intergenic | 20.0% |
| !! | TTAGCAATGTGTTATATTTA+AGG | + | 32557:10339-10358 | MS.gene041603:intron | 20.0% |
| !!! | ACTTTATTTTTTTCCAAGAA+CGG | - | 32557:11614-11633 | None:intergenic | 20.0% |
| !!! | ATTTTAGATGATGAATGTTT+GGG | + | 32557:11412-11431 | MS.gene041603:intron | 20.0% |
| !!! | GAATTGAATTGAATTGATTT+GGG | - | 32557:9876-9895 | None:intergenic | 20.0% |
| !!! | TAATTGATTCACTAATTTTC+AGG | + | 32557:9937-9956 | MS.gene041603:intron | 20.0% |
| !!! | TATTTTAGATGATGAATGTT+TGG | + | 32557:11411-11430 | MS.gene041603:intron | 20.0% |
| ! | CAATATATGTCTATCAACAT+AGG | - | 32557:11503-11522 | None:intergenic | 25.0% |
| ! | CTCATATCAATAACATCTAT+GGG | - | 32557:11007-11026 | None:intergenic | 25.0% |
| ! | GCATTATATTTAACCTATGA+AGG | - | 32557:12124-12143 | None:intergenic | 25.0% |
| ! | GTTAGAAAAAGGAAAATATC+CGG | + | 32557:12273-12292 | MS.gene041603:CDS | 25.0% |
| ! | TAAACTAATTGCATAGAGAT+GGG | + | 32557:11213-11232 | MS.gene041603:intron | 25.0% |
| ! | TCATATCAATAACATCTATG+GGG | - | 32557:11006-11025 | None:intergenic | 25.0% |
| ! | TCATCATAATCAATGTTAAC+TGG | - | 32557:12163-12182 | None:intergenic | 25.0% |
| ! | TCTCATATCAATAACATCTA+TGG | - | 32557:11008-11027 | None:intergenic | 25.0% |
| ! | TGGAGTTTAATGTTAGAAAA+AGG | + | 32557:12262-12281 | MS.gene041603:CDS | 25.0% |
| ! | TTGTTGAAAAAGACACTAAT+AGG | - | 32557:10885-10904 | None:intergenic | 25.0% |
| ! | TTTCTTACAATAGGACTAAT+TGG | - | 32557:10472-10491 | None:intergenic | 25.0% |
| AAAAGACACTAATAGGAACT+CGG | - | 32557:10878-10897 | None:intergenic | 30.0% | |
| AACTACAATACTATATGCTG+TGG | - | 32557:10932-10951 | None:intergenic | 30.0% | |
| AAGTTTGAATATCATGTCCT+TGG | - | 32557:11285-11304 | None:intergenic | 30.0% | |
| ACATCGTCTTACTTGAAAAA+TGG | + | 32557:9983-10002 | MS.gene041603:CDS | 30.0% | |
| ACTACAATACTATATGCTGT+GGG | - | 32557:10931-10950 | None:intergenic | 30.0% | |
| AGCATACACTTTCTTACAAT+AGG | - | 32557:10481-10500 | None:intergenic | 30.0% | |
| ATTTAACCTATGAAGGAAAC+TGG | - | 32557:12117-12136 | None:intergenic | 30.0% | |
| CAAACATATCTCGCAAATTT+AGG | - | 32557:10706-10725 | None:intergenic | 30.0% | |
| CAGATTAGGAAATTTGAGAA+AGG | - | 32557:9902-9921 | None:intergenic | 30.0% | |
| CATATCAATAACATCTATGG+GGG | - | 32557:11005-11024 | None:intergenic | 30.0% | |
| CTAAACTAATTGCATAGAGA+TGG | + | 32557:11212-11231 | MS.gene041603:intron | 30.0% | |
| CTCAAACATTTGAAAACTCA+AGG | - | 32557:11849-11868 | None:intergenic | 30.0% | |
| GAATCAATTACTACAGTACA+CGG | - | 32557:9927-9946 | None:intergenic | 30.0% | |
| TCTTAAAAGCTAGCTATCAA+GGG | + | 32557:10753-10772 | MS.gene041603:intron | 30.0% | |
| TCTTACATGACATTGTTTGA+AGG | + | 32557:11329-11348 | MS.gene041603:CDS | 30.0% | |
| TTGTATATCAGGTTATGCTT+TGG | + | 32557:10187-10206 | MS.gene041603:intron | 30.0% | |
| TTGTCAGAAACTCTTTGATT+TGG | + | 32557:9760-9779 | MS.gene041603:CDS | 30.0% | |
| ! | CATCTCTATGCAATTAGTTT+AGG | - | 32557:11214-11233 | None:intergenic | 30.0% |
| ! | TGATCTAGAATTATGGCTAA+AGG | + | 32557:11131-11150 | MS.gene041603:CDS | 30.0% |
| ! | TGTCAGAAACTCTTTGATTT+GGG | + | 32557:9761-9780 | MS.gene041603:CDS | 30.0% |
| !! | ACAGATTCTAGCTTAACAAA+TGG | + | 32557:11914-11933 | MS.gene041603:intron | 30.0% |
| !!! | AGTTTTTTTGCACTTCTTCT+TGG | + | 32557:11158-11177 | MS.gene041603:intron | 30.0% |
| !!! | TTTTTCAAGTAAGACGATGT+TGG | - | 32557:9983-10002 | None:intergenic | 30.0% |
| !!! | TTTTTTCCAAGAACGGTTTT+GGG | - | 32557:11607-11626 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCAAGAACGGTTT+TGG | - | 32557:11608-11627 | None:intergenic | 30.0% |
| AAAGACACTAATAGGAACTC+GGG | - | 32557:10877-10896 | None:intergenic | 35.0% | |
| AACAATTACACTTGAACCAC+TGG | + | 32557:10270-10289 | MS.gene041603:intron | 35.0% | |
| AAGATAACTGCTGGTATTAC+AGG | + | 32557:12228-12247 | MS.gene041603:CDS | 35.0% | |
| AATATCACTACCATTAGACG+TGG | - | 32557:11687-11706 | None:intergenic | 35.0% | |
| AATTCCATATGACATGCACA+CGG | - | 32557:10668-10687 | None:intergenic | 35.0% | |
| AATTCTAGATCATCAGGGTT+TGG | - | 32557:11123-11142 | None:intergenic | 35.0% | |
| ACAATTACACTTGAACCACT+GGG | + | 32557:10271-10290 | MS.gene041603:intron | 35.0% | |
| ACTTAACCAGTTTCCTTCAT+AGG | + | 32557:12108-12127 | MS.gene041603:intron | 35.0% | |
| ACTTGATGTGCTAAGTAGTA+TGG | - | 32557:10816-10835 | None:intergenic | 35.0% | |
| AGCCATAATTCTAGATCATC+AGG | - | 32557:11129-11148 | None:intergenic | 35.0% | |
| ATTGAGTACCCTCGATAATA+AGG | + | 32557:11462-11481 | MS.gene041603:intron | 35.0% | |
| CTCTTAAAAGCTAGCTATCA+AGG | + | 32557:10752-10771 | MS.gene041603:intron | 35.0% | |
| CTTAAAAGCTAGCTATCAAG+GGG | + | 32557:10754-10773 | MS.gene041603:intron | 35.0% | |
| GAAATGATTCCACTTTGTCT+TGG | + | 32557:10548-10567 | MS.gene041603:intron | 35.0% | |
| GCCATAATTCTAGATCATCA+GGG | - | 32557:11128-11147 | None:intergenic | 35.0% | |
| TCGTCTTACTTGAAAAATGG+CGG | + | 32557:9986-10005 | MS.gene041603:CDS | 35.0% | |
| TGAAACAATCCAAGACAAAG+TGG | - | 32557:10560-10579 | None:intergenic | 35.0% | |
| TGTAGGTAGATGAGGAAATT+CGG | + | 32557:11246-11265 | MS.gene041603:intron | 35.0% | |
| TTAAAAGCTAGCTATCAAGG+GGG | + | 32557:10755-10774 | MS.gene041603:intron | 35.0% | |
| TTCAACTTACCTAAGTCACA+AGG | - | 32557:11995-12014 | None:intergenic | 35.0% | |
| ! | ACCCTGATGATCTAGAATTA+TGG | + | 32557:11124-11143 | MS.gene041603:CDS | 35.0% |
| ! | ACGTCTAATGGTAGTGATAT+TGG | + | 32557:11686-11705 | MS.gene041603:intron | 35.0% |
| ! | ATCTTTTGACCTTCTTTCAC+AGG | - | 32557:12213-12232 | None:intergenic | 35.0% |
| ! | CATTGATTATGATGATGTGC+AGG | + | 32557:12168-12187 | MS.gene041603:intron | 35.0% |
| ! | TCTTTTGACCTTCTTTCACA+GGG | - | 32557:12212-12231 | None:intergenic | 35.0% |
| ! | TTTTTCCAAGAACGGTTTTG+GGG | - | 32557:11606-11625 | None:intergenic | 35.0% |
| !!! | GATAGCTAGCTTTTAAGAGA+GGG | - | 32557:10751-10770 | None:intergenic | 35.0% |
| !!! | TGATAGCTAGCTTTTAAGAG+AGG | - | 32557:10752-10771 | None:intergenic | 35.0% |
| AAGTATACGAGCCTTTGCAA+AGG | + | 32557:11537-11556 | MS.gene041603:intron | 40.0% | |
| AATGATATGAGCTGCCAAGT+GGG | - | 32557:11779-11798 | None:intergenic | 40.0% | |
| ACATCAAGTATCAAGTCACG+TGG | + | 32557:10827-10846 | MS.gene041603:intron | 40.0% | |
| ACCCTCGATAATAAGGTCTT+GGG | + | 32557:11469-11488 | MS.gene041603:intron | 40.0% | |
| ACCTGCAGACTAACAACAAA+AGG | - | 32557:10410-10429 | None:intergenic | 40.0% | |
| AGAAACATCACGAGCTTTCT+TGG | - | 32557:10077-10096 | None:intergenic | 40.0% | |
| ATTCCATATGACATGCACAC+GGG | - | 32557:10667-10686 | None:intergenic | 40.0% | |
| ATTTGCTTCGAGATCATGCT+TGG | + | 32557:11717-11736 | MS.gene041603:intron | 40.0% | |
| CATACTTATGTACATCCCAG+TGG | - | 32557:10289-10308 | None:intergenic | 40.0% | |
| CCTGCAGACTAACAACAAAA+GGG | - | 32557:10409-10428 | None:intergenic | 40.0% | |
| CTTACTACGAGCATTACTTG+TGG | + | 32557:12074-12093 | MS.gene041603:intron | 40.0% | |
| GAAGGAGATGTCATTCTAAC+TGG | + | 32557:11347-11366 | MS.gene041603:CDS | 40.0% | |
| GAAGGTCAAAAGATAACTGC+TGG | + | 32557:12219-12238 | MS.gene041603:CDS | 40.0% | |
| GAGCTAACTTGACTCACTTT+CGG | - | 32557:11751-11770 | None:intergenic | 40.0% | |
| GCACTTCTTCTTGGATACTT+TGG | + | 32557:11167-11186 | MS.gene041603:intron | 40.0% | |
| GCATGATCTCGAAGCAAATA+AGG | - | 32557:11716-11735 | None:intergenic | 40.0% | |
| GCTAAGTAGTATGGAATGCT+CGG | - | 32557:10807-10826 | None:intergenic | 40.0% | |
| GCTGAAATACCTTGTGACTT+AGG | + | 32557:11983-12002 | MS.gene041603:intron | 40.0% | |
| TAATGATATGAGCTGCCAAG+TGG | - | 32557:11780-11799 | None:intergenic | 40.0% | |
| TAATTGGTGTGAACGTATCC+TGG | - | 32557:10456-10475 | None:intergenic | 40.0% | |
| TACAGTACACGGATCAGATT+AGG | - | 32557:9916-9935 | None:intergenic | 40.0% | |
| TACCCTCGATAATAAGGTCT+TGG | + | 32557:11468-11487 | MS.gene041603:intron | 40.0% | |
| TATACCAGCAACGTAATCCA+TGG | - | 32557:10110-10129 | None:intergenic | 40.0% | |
| TATCAAGTCACGTGGATACT+CGG | + | 32557:10835-10854 | MS.gene041603:intron | 40.0% | |
| TCAACTGAACCAACACTTGA+TGG | - | 32557:11438-11457 | None:intergenic | 40.0% | |
| TGTAGACCAAGTGCTTGTAA+AGG | - | 32557:10631-10650 | None:intergenic | 40.0% | |
| TTACCACAAGCAATGAGTCA+TGG | + | 32557:10978-10997 | MS.gene041603:intron | 40.0% | |
| TTACCTTAGCAGCAGATTGA+AGG | - | 32557:10235-10254 | None:intergenic | 40.0% | |
| TTTGCTTCGAGATCATGCTT+GGG | + | 32557:11718-11737 | MS.gene041603:intron | 40.0% | |
| ! | AAGAGTGTGTTTGTGACCTT+GGG | - | 32557:9851-9870 | None:intergenic | 40.0% |
| ! | AGATGGGTTTGCTTTGTTGT+AGG | + | 32557:11229-11248 | MS.gene041603:intron | 40.0% |
| ! | TGCTTTGTTGTAGGTAGATG+AGG | + | 32557:11238-11257 | MS.gene041603:intron | 40.0% |
| !! | CAAGTGTTGGTTCAGTTGAT+TGG | + | 32557:11439-11458 | MS.gene041603:intron | 40.0% |
| !! | GTTGGTTTGAGAAACAACAC+TGG | - | 32557:9965-9984 | None:intergenic | 40.0% |
| ACCCCAAGACCTTATTATCG+AGG | - | 32557:11474-11493 | None:intergenic | 45.0% | |
| AGATGAGGAAATTCGGCAGA+AGG | + | 32557:11253-11272 | MS.gene041603:CDS | 45.0% | |
| AGTTAGCCGAGCTTGATCTT+AGG | + | 32557:12041-12060 | MS.gene041603:intron | 45.0% | |
| ATAGGAACTCGGGTATTACG+CGG | - | 32557:10867-10886 | None:intergenic | 45.0% | |
| ATCAAGTCACGTGGATACTC+GGG | + | 32557:10836-10855 | MS.gene041603:intron | 45.0% | |
| ATCAGGTTATGCTTTGGCAC+TGG | + | 32557:10193-10212 | MS.gene041603:intron | 45.0% | |
| ATGTTTGGGCCATCAAGTGT+TGG | + | 32557:11426-11445 | MS.gene041603:intron | 45.0% | |
| CAAGCCATGATCCTTTGCAA+AGG | - | 32557:11551-11570 | None:intergenic | 45.0% | |
| CCCCAAGACCTTATTATCGA+GGG | - | 32557:11473-11492 | None:intergenic | 45.0% | |
| CCCTCGATAATAAGGTCTTG+GGG | + | 32557:11470-11489 | MS.gene041603:intron | 45.0% | |
| CCTAAGCCTAAGATCAAGCT+CGG | - | 32557:12050-12069 | None:intergenic | 45.0% | |
| CTTCCATGGAGTTTGGCAAA+AGG | + | 32557:10430-10449 | MS.gene041603:CDS | 45.0% | |
| GAAGAGTTAGCCACGTCTAA+TGG | + | 32557:11674-11693 | MS.gene041603:intron | 45.0% | |
| GATGAGGAAATTCGGCAGAA+GGG | + | 32557:11254-11273 | MS.gene041603:CDS | 45.0% | |
| GATTTGGGCACGAAGATCAT+CGG | + | 32557:9776-9795 | MS.gene041603:CDS | 45.0% | |
| GCTGCTCATGCTAAAGAACT+AGG | + | 32557:9815-9834 | MS.gene041603:CDS | 45.0% | |
| TGATCGCCTTTACAAGCACT+TGG | + | 32557:10622-10641 | MS.gene041603:intron | 45.0% | |
| TGTGTTTGTGACCTTGGGAA+CGG | - | 32557:9846-9865 | None:intergenic | 45.0% | |
| TTACCCGTGTGCATGTCATA+TGG | + | 32557:10661-10680 | MS.gene041603:intron | 45.0% | |
| TTGCTTCGAGATCATGCTTG+GGG | + | 32557:11719-11738 | MS.gene041603:intron | 45.0% | |
| ! | GAAGAGTGTGTTTGTGACCT+TGG | - | 32557:9852-9871 | None:intergenic | 45.0% |
| ! | TGTTTCTGAATCCTCTGCCA+TGG | + | 32557:10090-10109 | MS.gene041603:CDS | 45.0% |
| !!! | AAGAACGGTTTTGGGGAGAA+GGG | - | 32557:11599-11618 | None:intergenic | 45.0% |
| !!! | CCCTTTTGTTGTTAGTCTGC+AGG | + | 32557:10406-10425 | MS.gene041603:intron | 45.0% |
| AGCAACGTAATCCATGGCAG+AGG | - | 32557:10104-10123 | None:intergenic | 50.0% | |
| AGCTTTCTTGGCGATGACGA+CGG | - | 32557:10065-10084 | None:intergenic | 50.0% | |
| ATGGAGTTTGGCAAAAGGCC+AGG | + | 32557:10435-10454 | MS.gene041603:CDS | 50.0% | |
| CATTAAACTCCACGTCCACG+AGG | - | 32557:12254-12273 | None:intergenic | 50.0% | |
| CCGAGCTTGATCTTAGGCTT+AGG | + | 32557:12047-12066 | MS.gene041603:intron | 50.0% | |
| CGAGCCTTTGCAAAGGATCA+TGG | + | 32557:11544-11563 | MS.gene041603:intron | 50.0% | |
| CTTCTCCCCAAAACCGTTCT+TGG | + | 32557:11598-11617 | MS.gene041603:intron | 50.0% | |
| GGACCATGACTCATTGCTTG+TGG | - | 32557:10984-11003 | None:intergenic | 50.0% | |
| GGACCTTCAATCTGCTGCTA+AGG | + | 32557:10229-10248 | MS.gene041603:CDS | 50.0% | |
| TCGAGATCATGCTTGGGGAT+GGG | + | 32557:11724-11743 | MS.gene041603:intron | 50.0% | |
| TGCAGGTCTTCCATGGAGTT+TGG | + | 32557:10423-10442 | MS.gene041603:CDS | 50.0% | |
| TGGAGAGAACTCTCGTTGTG+TGG | - | 32557:10025-10044 | None:intergenic | 50.0% | |
| TTCGAGATCATGCTTGGGGA+TGG | + | 32557:11723-11742 | MS.gene041603:intron | 50.0% | |
| ! | AGGGTTTGGTACTGCAGTCT+TGG | - | 32557:11109-11128 | None:intergenic | 50.0% |
| ! | GGCACTGGATATGACTGCTA+GGG | + | 32557:10208-10227 | MS.gene041603:CDS | 50.0% |
| ! | GGGTTTGGTACTGCAGTCTT+GGG | - | 32557:11108-11127 | None:intergenic | 50.0% |
| ! | GGTAGAGTATCCACGTGACT+TGG | - | 32557:10786-10805 | None:intergenic | 50.0% |
| ! | GTTAGTCTGCAGGTCTTCCA+TGG | + | 32557:10416-10435 | MS.gene041603:intron | 50.0% |
| ! | TCTGCCATGGATTACGTTGC+TGG | + | 32557:10103-10122 | MS.gene041603:CDS | 50.0% |
| ! | TGGCACTGGATATGACTGCT+AGG | + | 32557:10207-10226 | MS.gene041603:CDS | 50.0% |
| ! | TGGCCTTTTGCCAAACTCCA+TGG | - | 32557:10436-10455 | None:intergenic | 50.0% |
| !!! | CAAGAACGGTTTTGGGGAGA+AGG | - | 32557:11600-11619 | None:intergenic | 50.0% |
| AGTTAGCTCCTGTGCCCACT+TGG | + | 32557:11762-11781 | MS.gene041603:intron | 55.0% | |
| CGAGATCATGCTTGGGGATG+GGG | + | 32557:11725-11744 | MS.gene041603:intron | 55.0% | |
| CTTGTCGCGCTCTTGGAAAC+GGG | + | 32557:11567-11586 | MS.gene041603:intron | 55.0% | |
| GCTTGTCGCGCTCTTGGAAA+CGG | + | 32557:11566-11585 | MS.gene041603:intron | 55.0% | |
| TATTACAGGCCTCGTGGACG+TGG | + | 32557:12242-12261 | MS.gene041603:CDS | 55.0% | |
| TCTTTCACAGGGCCAACACC+CGG | - | 32557:12201-12220 | None:intergenic | 55.0% | |
| TGCTGGTATTACAGGCCTCG+TGG | + | 32557:12236-12255 | MS.gene041603:CDS | 55.0% | |
| ! | ATCATGGCTTGTCGCGCTCT+TGG | + | 32557:11560-11579 | MS.gene041603:intron | 55.0% |
| !! | GGTGTTGGCCCTGTGAAAGA+AGG | + | 32557:12201-12220 | MS.gene041603:CDS | 55.0% |
| !!! | AACGGTTTTGGGGAGAAGGG+AGG | - | 32557:11596-11615 | None:intergenic | 55.0% |
| ACTAGGCAACGCCGTTCCCA+AGG | + | 32557:9832-9851 | MS.gene041603:CDS | 60.0% | |
| ATGAGCTGCCAAGTGGGCAC+AGG | - | 32557:11773-11792 | None:intergenic | 60.0% | |
| ATGATGTGCAGGCACTCCCC+CGG | + | 32557:12179-12198 | MS.gene041603:intron | 60.0% | |
| CGGCGAGTTCGACTTCGTGA+TGG | - | 32557:10045-10064 | None:intergenic | 60.0% | |
| CTTTCACAGGGCCAACACCC+GGG | - | 32557:12200-12219 | None:intergenic | 60.0% | |
| GGCACGAAGATCATCGGCGT+CGG | + | 32557:9782-9801 | MS.gene041603:CDS | 60.0% | |
| GGGGGAAGAACCAAGTCACG+TGG | + | 32557:10773-10792 | MS.gene041603:intron | 60.0% | |
| TCGGCAGAAGGGCTCAACCA+AGG | + | 32557:11265-11284 | MS.gene041603:CDS | 60.0% | |
| TTTCACAGGGCCAACACCCG+GGG | - | 32557:12199-12218 | None:intergenic | 60.0% | |
| TGATGTGCAGGCACTCCCCC+GGG | + | 32557:12180-12199 | MS.gene041603:intron | 65.0% | |
| TTCACAGGGCCAACACCCGG+GGG | - | 32557:12198-12217 | None:intergenic | 65.0% | |
| GCAGGCACTCCCCCGGGTGT+TGG | + | 32557:12186-12205 | MS.gene041603:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32557 | gene | 9743 | 12302 | 9743 | ID=MS.gene041603 |
| 32557 | mRNA | 9743 | 12302 | 9743 | ID=MS.gene041603.t1;Parent=MS.gene041603 |
| 32557 | exon | 9743 | 9853 | 9743 | ID=MS.gene041603.t1.exon1;Parent=MS.gene041603.t1 |
| 32557 | CDS | 9743 | 9853 | 9743 | ID=cds.MS.gene041603.t1;Parent=MS.gene041603.t1 |
| 32557 | exon | 9959 | 10124 | 9959 | ID=MS.gene041603.t1.exon2;Parent=MS.gene041603.t1 |
| 32557 | CDS | 9959 | 10124 | 9959 | ID=cds.MS.gene041603.t1;Parent=MS.gene041603.t1 |
| 32557 | exon | 10198 | 10250 | 10198 | ID=MS.gene041603.t1.exon3;Parent=MS.gene041603.t1 |
| 32557 | CDS | 10198 | 10250 | 10198 | ID=cds.MS.gene041603.t1;Parent=MS.gene041603.t1 |
| 32557 | exon | 10421 | 10483 | 10421 | ID=MS.gene041603.t1.exon4;Parent=MS.gene041603.t1 |
| 32557 | CDS | 10421 | 10483 | 10421 | ID=cds.MS.gene041603.t1;Parent=MS.gene041603.t1 |
| 32557 | exon | 11102 | 11152 | 11102 | ID=MS.gene041603.t1.exon5;Parent=MS.gene041603.t1 |
| 32557 | CDS | 11102 | 11152 | 11102 | ID=cds.MS.gene041603.t1;Parent=MS.gene041603.t1 |
| 32557 | exon | 11251 | 11368 | 11251 | ID=MS.gene041603.t1.exon6;Parent=MS.gene041603.t1 |
| 32557 | CDS | 11251 | 11368 | 11251 | ID=cds.MS.gene041603.t1;Parent=MS.gene041603.t1 |
| 32557 | exon | 12190 | 12302 | 12190 | ID=MS.gene041603.t1.exon7;Parent=MS.gene041603.t1 |
| 32557 | CDS | 12190 | 12302 | 12190 | ID=cds.MS.gene041603.t1;Parent=MS.gene041603.t1 |
| Gene Sequence |
| Protein sequence |
