Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071503.t1 | XP_013458265.1 | 98.9 | 187 | 2 | 0 | 1 | 187 | 38 | 224 | 2.40E-97 | 364.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071503.t1 | Q93ZE5 | 76.2 | 181 | 43 | 0 | 2 | 182 | 38 | 218 | 5.0e-75 | 282.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071503.t1 | A0A072USI0 | 98.9 | 187 | 2 | 0 | 1 | 187 | 38 | 224 | 1.8e-97 | 364.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071503 | MS.gene035366 | PPI |
| MS.gene071503 | MS.gene77824 | PPI |
| MS.gene071503 | MS.gene035368 | PPI |
| MS.gene071503 | MS.gene041601 | PPI |
| MS.gene071503 | MS.gene45012 | PPI |
| MS.gene071503 | MS.gene041603 | PPI |
| MS.gene071505 | MS.gene071503 | PPI |
| MS.gene071503 | MS.gene066362 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071503.t1 | MTR_4g120230 | 98.930 | 187 | 2 | 0 | 1 | 187 | 38 | 224 | 9.85e-135 | 376 |
| MS.gene071503.t1 | MTR_4g120230 | 99.333 | 150 | 1 | 0 | 1 | 150 | 38 | 187 | 3.14e-107 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071503.t1 | AT4G15940 | 75.691 | 181 | 43 | 1 | 2 | 182 | 38 | 217 | 1.40e-98 | 284 |
| MS.gene071503.t1 | AT3G16700 | 74.033 | 181 | 47 | 0 | 2 | 182 | 38 | 218 | 1.35e-96 | 280 |
| MS.gene071503.t1 | AT3G16700 | 72.973 | 111 | 30 | 0 | 2 | 112 | 38 | 148 | 1.14e-54 | 171 |
| MS.gene071503.t1 | AT3G16700 | 76.056 | 71 | 17 | 0 | 2 | 72 | 38 | 108 | 1.15e-32 | 114 |
| MS.gene071503.t1 | AT3G16700 | 76.056 | 71 | 17 | 0 | 2 | 72 | 38 | 108 | 1.15e-32 | 114 |
Find 0 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCATCTTTATAAAATAT+AGG | - | 32563:13697-13716 | MS.gene071503:CDS | 10.0% |
| !! | TAAAATATTCAATTAATATG+AGG | - | 32563:13819-13838 | MS.gene071503:intron | 10.0% |
| !!! | TCATATTAATTGAATATTTT+AGG | + | 32563:13820-13839 | None:intergenic | 10.0% |
| !! | ATTTATTATCTTTGTATATC+AGG | - | 32563:12056-12075 | MS.gene071503:intron | 15.0% |
| !! | TTCTTGAAAAAAATAAAGTT+TGG | - | 32563:13493-13512 | MS.gene071503:intron | 15.0% |
| !!! | AACTTTATTTTTTTCAAGAA+CGG | + | 32563:13493-13512 | None:intergenic | 15.0% |
| !!! | AATCAAATTTGAAATTTGAA+AGG | + | 32563:12020-12039 | None:intergenic | 15.0% |
| !!! | TTTAACAAAGTACTTAAAAA+AGG | - | 32563:13753-13772 | MS.gene071503:intron | 15.0% |
| !! | CTTATGAAGCTAATTAAAAA+TGG | + | 32563:13187-13206 | None:intergenic | 20.0% |
| !! | TTAGCAATGTGTTATATTTA+AGG | - | 32563:12219-12238 | MS.gene071503:intron | 20.0% |
| !!! | ATTTTAGATGATGAATGTTT+GGG | - | 32563:13291-13310 | MS.gene071503:intron | 20.0% |
| !!! | TATTTTAGATGATGAATGTT+TGG | - | 32563:13290-13309 | MS.gene071503:intron | 20.0% |
| ! | CAATATATGTCTATCAACAT+AGG | + | 32563:13382-13401 | None:intergenic | 25.0% |
| ! | CTCATATCAATAACATCTAT+GGG | + | 32563:12886-12905 | None:intergenic | 25.0% |
| ! | GCATTATATTTAACCTATGA+AGG | + | 32563:14002-14021 | None:intergenic | 25.0% |
| ! | GTTAGAAAAAGGAAAATATC+CGG | - | 32563:14151-14170 | MS.gene071503:CDS | 25.0% |
| ! | TAAACTAATTGCATAGAGAT+GGG | - | 32563:13092-13111 | MS.gene071503:intron | 25.0% |
| ! | TCATATCAATAACATCTATG+GGG | + | 32563:12885-12904 | None:intergenic | 25.0% |
| ! | TCATCATAATCAATGTTAAC+TGG | + | 32563:14041-14060 | None:intergenic | 25.0% |
| ! | TCTCATATCAATAACATCTA+TGG | + | 32563:12887-12906 | None:intergenic | 25.0% |
| ! | TGGAGTTTAATGTTAGAAAA+AGG | - | 32563:14140-14159 | MS.gene071503:CDS | 25.0% |
| ! | TTGTTGAAAAAGACACTAAT+AGG | + | 32563:12764-12783 | None:intergenic | 25.0% |
| ! | TTTCTTACAATAGGACTAAT+TGG | + | 32563:12352-12371 | None:intergenic | 25.0% |
| !!! | ATTTTTTTCAAGAACGGTTT+TGG | + | 32563:13487-13506 | None:intergenic | 25.0% |
| !!! | TTTTTTTCAAGAACGGTTTT+GGG | + | 32563:13486-13505 | None:intergenic | 25.0% |
| AAAAGACACTAATAGGAACT+CGG | + | 32563:12757-12776 | None:intergenic | 30.0% | |
| AACTACAATACTATATGCTG+TGG | + | 32563:12811-12830 | None:intergenic | 30.0% | |
| AAGTTTGAATATCATGTCCT+TGG | + | 32563:13164-13183 | None:intergenic | 30.0% | |
| ACATCGTCTTACTTGAAAAA+TGG | - | 32563:11863-11882 | MS.gene071503:CDS | 30.0% | |
| ACTACAATACTATATGCTGT+GGG | + | 32563:12810-12829 | None:intergenic | 30.0% | |
| AGCATACACTTTCTTACAAT+AGG | + | 32563:12361-12380 | None:intergenic | 30.0% | |
| ATTTAACCTATGAAGGAAAC+TGG | + | 32563:13995-14014 | None:intergenic | 30.0% | |
| CAAACATATCTCGCAAATTT+AGG | + | 32563:12586-12605 | None:intergenic | 30.0% | |
| CATATCAATAACATCTATGG+GGG | + | 32563:12884-12903 | None:intergenic | 30.0% | |
| CTAAACTAATTGCATAGAGA+TGG | - | 32563:13091-13110 | MS.gene071503:intron | 30.0% | |
| CTCAAACATTTGAAAACTCA+AGG | + | 32563:13727-13746 | None:intergenic | 30.0% | |
| TCTTAAAAGCTAGCTATCAA+GGG | - | 32563:12633-12652 | MS.gene071503:intron | 30.0% | |
| TCTTACATGACATTGTTTGA+AGG | - | 32563:13208-13227 | MS.gene071503:intron | 30.0% | |
| TTGTATATCAGGTTATGCTT+TGG | - | 32563:12067-12086 | MS.gene071503:intron | 30.0% | |
| ! | CATCTCTATGCAATTAGTTT+AGG | + | 32563:13093-13112 | None:intergenic | 30.0% |
| ! | TGATCTAGAATTATGGCTAA+AGG | - | 32563:13010-13029 | MS.gene071503:CDS | 30.0% |
| !! | ACAGATTCTAGCTTAACAAA+TGG | - | 32563:13792-13811 | MS.gene071503:intron | 30.0% |
| !!! | AGTTTTTTTGCACTTCTTCT+TGG | - | 32563:13037-13056 | MS.gene071503:intron | 30.0% |
| !!! | TTTTTCAAGTAAGACGATGT+TGG | + | 32563:11863-11882 | None:intergenic | 30.0% |
| !!! | TTTTTTCAAGAACGGTTTTG+GGG | + | 32563:13485-13504 | None:intergenic | 30.0% |
| AAAGACACTAATAGGAACTC+GGG | + | 32563:12756-12775 | None:intergenic | 35.0% | |
| AACAATTACACTTGAACCAC+TGG | - | 32563:12150-12169 | MS.gene071503:intron | 35.0% | |
| AAGATAACTGCTGGTATTAC+AGG | - | 32563:14106-14125 | MS.gene071503:CDS | 35.0% | |
| AATATCACTACCATTAGACG+TGG | + | 32563:13565-13584 | None:intergenic | 35.0% | |
| AATTCCATATGACATGCACA+CGG | + | 32563:12548-12567 | None:intergenic | 35.0% | |
| AATTCTAGATCATCAGGGTT+TGG | + | 32563:13002-13021 | None:intergenic | 35.0% | |
| ACAATTACACTTGAACCACT+GGG | - | 32563:12151-12170 | MS.gene071503:intron | 35.0% | |
| ACTTAACCAGTTTCCTTCAT+AGG | - | 32563:13986-14005 | MS.gene071503:intron | 35.0% | |
| ACTTGATGTGCTAAGTAGTA+TGG | + | 32563:12695-12714 | None:intergenic | 35.0% | |
| AGCCATAATTCTAGATCATC+AGG | + | 32563:13008-13027 | None:intergenic | 35.0% | |
| ATTGAGTACCCTCGATAATA+AGG | - | 32563:13341-13360 | MS.gene071503:intron | 35.0% | |
| CTCTTAAAAGCTAGCTATCA+AGG | - | 32563:12632-12651 | MS.gene071503:intron | 35.0% | |
| CTTAAAAGCTAGCTATCAAG+GGG | - | 32563:12634-12653 | MS.gene071503:intron | 35.0% | |
| GAAATGATTCCACTTTGTCT+TGG | - | 32563:12428-12447 | MS.gene071503:intron | 35.0% | |
| GCCATAATTCTAGATCATCA+GGG | + | 32563:13007-13026 | None:intergenic | 35.0% | |
| TCGTCTTACTTGAAAAATGG+CGG | - | 32563:11866-11885 | MS.gene071503:CDS | 35.0% | |
| TGAAACAATCCAAGACAAAG+TGG | + | 32563:12440-12459 | None:intergenic | 35.0% | |
| TGTAGGTAGATGAGGAAATT+CGG | - | 32563:13125-13144 | MS.gene071503:intron | 35.0% | |
| TTCAACTTACCTAAGTCACA+AGG | + | 32563:13873-13892 | None:intergenic | 35.0% | |
| ! | ACCCTGATGATCTAGAATTA+TGG | - | 32563:13003-13022 | MS.gene071503:CDS | 35.0% |
| ! | ACGTCTAATGGTAGTGATAT+TGG | - | 32563:13564-13583 | MS.gene071503:intron | 35.0% |
| ! | ATCTTTTGACCTTCTTTCAC+AGG | + | 32563:14091-14110 | None:intergenic | 35.0% |
| ! | CATTGATTATGATGATGTGC+AGG | - | 32563:14046-14065 | MS.gene071503:CDS | 35.0% |
| ! | TCTTTTGACCTTCTTTCACA+GGG | + | 32563:14090-14109 | None:intergenic | 35.0% |
| !!! | GATAGCTAGCTTTTAAGAGA+GGG | + | 32563:12631-12650 | None:intergenic | 35.0% |
| !!! | TGATAGCTAGCTTTTAAGAG+AGG | + | 32563:12632-12651 | None:intergenic | 35.0% |
| AAGTATACGAGCCTTTGCAA+AGG | - | 32563:13416-13435 | MS.gene071503:intron | 40.0% | |
| AATGATATGAGCTGCCAAGT+GGG | + | 32563:13657-13676 | None:intergenic | 40.0% | |
| ACATCAAGTATCAAGTCACG+TGG | - | 32563:12706-12725 | MS.gene071503:intron | 40.0% | |
| ACCCTCGATAATAAGGTCTT+GGG | - | 32563:13348-13367 | MS.gene071503:intron | 40.0% | |
| ACCTGCAGACTAACAACAAA+AGG | + | 32563:12290-12309 | None:intergenic | 40.0% | |
| AGAAACATCACGAGCTTTCT+TGG | + | 32563:11957-11976 | None:intergenic | 40.0% | |
| ATTCCATATGACATGCACAC+GGG | + | 32563:12547-12566 | None:intergenic | 40.0% | |
| ATTTGCTTCGAGATCATGCT+TGG | - | 32563:13595-13614 | MS.gene071503:intron | 40.0% | |
| CATACTTATGTACATCCCAG+TGG | + | 32563:12169-12188 | None:intergenic | 40.0% | |
| CCTGCAGACTAACAACAAAA+GGG | + | 32563:12289-12308 | None:intergenic | 40.0% | |
| CTTACTACGAGCATTACTTG+TGG | - | 32563:13952-13971 | MS.gene071503:intron | 40.0% | |
| GAAGGAGATGTCATTCTAAC+TGG | - | 32563:13226-13245 | MS.gene071503:intron | 40.0% | |
| GAAGGTCAAAAGATAACTGC+TGG | - | 32563:14097-14116 | MS.gene071503:CDS | 40.0% | |
| GAGCTAACTTGACTCACTTT+CGG | + | 32563:13629-13648 | None:intergenic | 40.0% | |
| GCACTTCTTCTTGGATACTT+TGG | - | 32563:13046-13065 | MS.gene071503:intron | 40.0% | |
| GCATGATCTCGAAGCAAATA+AGG | + | 32563:13594-13613 | None:intergenic | 40.0% | |
| GCTAAGTAGTATGGAATGCT+CGG | + | 32563:12686-12705 | None:intergenic | 40.0% | |
| GCTGAAATACCTTGTGACTT+AGG | - | 32563:13861-13880 | MS.gene071503:intron | 40.0% | |
| TAATGATATGAGCTGCCAAG+TGG | + | 32563:13658-13677 | None:intergenic | 40.0% | |
| TAATTGGTGTGAACGTATCC+TGG | + | 32563:12336-12355 | None:intergenic | 40.0% | |
| TACCCTCGATAATAAGGTCT+TGG | - | 32563:13347-13366 | MS.gene071503:intron | 40.0% | |
| TATACCAGCAACGTAATCCA+TGG | + | 32563:11990-12009 | None:intergenic | 40.0% | |
| TATCAAGTCACGTGGATACT+CGG | - | 32563:12714-12733 | MS.gene071503:intron | 40.0% | |
| TCAACTGAACCAACACTTGA+TGG | + | 32563:13317-13336 | None:intergenic | 40.0% | |
| TGTAGACCAAGTGCTTGTAA+AGG | + | 32563:12511-12530 | None:intergenic | 40.0% | |
| TTACCACAAGCAATGAGTCA+TGG | - | 32563:12857-12876 | MS.gene071503:CDS | 40.0% | |
| TTACCTTAGCAGCAGATTGA+AGG | + | 32563:12115-12134 | None:intergenic | 40.0% | |
| TTTGCTTCGAGATCATGCTT+GGG | - | 32563:13596-13615 | MS.gene071503:intron | 40.0% | |
| ! | AGATGGGTTTGCTTTGTTGT+AGG | - | 32563:13108-13127 | MS.gene071503:intron | 40.0% |
| ! | TGCTTTGTTGTAGGTAGATG+AGG | - | 32563:13117-13136 | MS.gene071503:intron | 40.0% |
| !! | CAAGTGTTGGTTCAGTTGAT+TGG | - | 32563:13318-13337 | MS.gene071503:intron | 40.0% |
| !! | GTTGGTTTGAGAAACAACAC+TGG | + | 32563:11845-11864 | None:intergenic | 40.0% |
| ACCCCAAGACCTTATTATCG+AGG | + | 32563:13353-13372 | None:intergenic | 45.0% | |
| AGATGAGGAAATTCGGCAGA+AGG | - | 32563:13132-13151 | MS.gene071503:intron | 45.0% | |
| AGTTAGCCGAGCTTGATCTT+AGG | - | 32563:13919-13938 | MS.gene071503:CDS | 45.0% | |
| ATAGGAACTCGGGTATTACG+CGG | + | 32563:12746-12765 | None:intergenic | 45.0% | |
| ATCAAGTCACGTGGATACTC+GGG | - | 32563:12715-12734 | MS.gene071503:intron | 45.0% | |
| ATCAGGTTATGCTTTGGCAC+TGG | - | 32563:12073-12092 | MS.gene071503:intron | 45.0% | |
| ATGTTTGGGCCATCAAGTGT+TGG | - | 32563:13305-13324 | MS.gene071503:intron | 45.0% | |
| CAAGCCATGATCCTTTGCAA+AGG | + | 32563:13430-13449 | None:intergenic | 45.0% | |
| CCCCAAGACCTTATTATCGA+GGG | + | 32563:13352-13371 | None:intergenic | 45.0% | |
| CCCTCGATAATAAGGTCTTG+GGG | - | 32563:13349-13368 | MS.gene071503:intron | 45.0% | |
| CCTAAGCCTAAGATCAAGCT+CGG | + | 32563:13928-13947 | None:intergenic | 45.0% | |
| CTTCCATGGAGTTTGGCAAA+AGG | - | 32563:12310-12329 | MS.gene071503:intron | 45.0% | |
| GAAGAGTTAGCCACGTCTAA+TGG | - | 32563:13552-13571 | MS.gene071503:intron | 45.0% | |
| GATGAGGAAATTCGGCAGAA+GGG | - | 32563:13133-13152 | MS.gene071503:intron | 45.0% | |
| TGATCGCCTTTACAAGCACT+TGG | - | 32563:12502-12521 | MS.gene071503:intron | 45.0% | |
| TTACCCGTGTGCATGTCATA+TGG | - | 32563:12541-12560 | MS.gene071503:intron | 45.0% | |
| TTGCTTCGAGATCATGCTTG+GGG | - | 32563:13597-13616 | MS.gene071503:intron | 45.0% | |
| ! | TGTTTCTGAATCCTCTGCCA+TGG | - | 32563:11970-11989 | MS.gene071503:intron | 45.0% |
| !!! | AAGAACGGTTTTGGGGAGAA+GGG | + | 32563:13478-13497 | None:intergenic | 45.0% |
| !!! | CCCTTTTGTTGTTAGTCTGC+AGG | - | 32563:12286-12305 | MS.gene071503:intron | 45.0% |
| AGCAACGTAATCCATGGCAG+AGG | + | 32563:11984-12003 | None:intergenic | 50.0% | |
| AGCTTTCTTGGCGATGACGA+CGG | + | 32563:11945-11964 | None:intergenic | 50.0% | |
| ATGGAGTTTGGCAAAAGGCC+AGG | - | 32563:12315-12334 | MS.gene071503:intron | 50.0% | |
| CATTAAACTCCACGTCCACG+AGG | + | 32563:14132-14151 | None:intergenic | 50.0% | |
| CCGAGCTTGATCTTAGGCTT+AGG | - | 32563:13925-13944 | MS.gene071503:intron | 50.0% | |
| CGAGCCTTTGCAAAGGATCA+TGG | - | 32563:13423-13442 | MS.gene071503:intron | 50.0% | |
| GGACCATGACTCATTGCTTG+TGG | + | 32563:12863-12882 | None:intergenic | 50.0% | |
| GGACCTTCAATCTGCTGCTA+AGG | - | 32563:12109-12128 | MS.gene071503:intron | 50.0% | |
| TCGAGATCATGCTTGGGGAT+GGG | - | 32563:13602-13621 | MS.gene071503:intron | 50.0% | |
| TGCAGGTCTTCCATGGAGTT+TGG | - | 32563:12303-12322 | MS.gene071503:intron | 50.0% | |
| TGGAGAGAACTCTCGTTGTG+TGG | + | 32563:11905-11924 | None:intergenic | 50.0% | |
| TTCGAGATCATGCTTGGGGA+TGG | - | 32563:13601-13620 | MS.gene071503:intron | 50.0% | |
| ! | AGGGTTTGGTACTGCAGTCT+TGG | + | 32563:12988-13007 | None:intergenic | 50.0% |
| ! | GGCACTGGATATGACTGCTA+GGG | - | 32563:12088-12107 | MS.gene071503:intron | 50.0% |
| ! | GGGTTTGGTACTGCAGTCTT+GGG | + | 32563:12987-13006 | None:intergenic | 50.0% |
| ! | GGTAGAGTATCCACGTGACT+TGG | + | 32563:12665-12684 | None:intergenic | 50.0% |
| ! | GTTAGTCTGCAGGTCTTCCA+TGG | - | 32563:12296-12315 | MS.gene071503:intron | 50.0% |
| ! | TCTGCCATGGATTACGTTGC+TGG | - | 32563:11983-12002 | MS.gene071503:intron | 50.0% |
| ! | TGGCACTGGATATGACTGCT+AGG | - | 32563:12087-12106 | MS.gene071503:intron | 50.0% |
| ! | TGGCCTTTTGCCAAACTCCA+TGG | + | 32563:12316-12335 | None:intergenic | 50.0% |
| !!! | CAAGAACGGTTTTGGGGAGA+AGG | + | 32563:13479-13498 | None:intergenic | 50.0% |
| AGGGGAAGAACCAAGTCACG+TGG | - | 32563:12652-12671 | MS.gene071503:intron | 55.0% | |
| AGTTAGCTCCTGTGCCCACT+TGG | - | 32563:13640-13659 | MS.gene071503:intron | 55.0% | |
| CGAGATCATGCTTGGGGATG+GGG | - | 32563:13603-13622 | MS.gene071503:intron | 55.0% | |
| CTTGTCGCGCTCTTGGAAAC+GGG | - | 32563:13446-13465 | MS.gene071503:intron | 55.0% | |
| GCTTGTCGCGCTCTTGGAAA+CGG | - | 32563:13445-13464 | MS.gene071503:intron | 55.0% | |
| TATTACAGGCCTCGTGGACG+TGG | - | 32563:14120-14139 | MS.gene071503:CDS | 55.0% | |
| TCTTTCACAGGGCCAACACC+CGG | + | 32563:14079-14098 | None:intergenic | 55.0% | |
| TGCTGGTATTACAGGCCTCG+TGG | - | 32563:14114-14133 | MS.gene071503:CDS | 55.0% | |
| ! | ATCATGGCTTGTCGCGCTCT+TGG | - | 32563:13439-13458 | MS.gene071503:intron | 55.0% |
| !! | GGTGTTGGCCCTGTGAAAGA+AGG | - | 32563:14079-14098 | MS.gene071503:CDS | 55.0% |
| !!! | AACGGTTTTGGGGAGAAGGG+AGG | + | 32563:13475-13494 | None:intergenic | 55.0% |
| ATGAGCTGCCAAGTGGGCAC+AGG | + | 32563:13651-13670 | None:intergenic | 60.0% | |
| ATGATGTGCAGGCACTCCCC+CGG | - | 32563:14057-14076 | MS.gene071503:CDS | 60.0% | |
| CGGCGAGTTCGACTTCGTGA+TGG | + | 32563:11925-11944 | None:intergenic | 60.0% | |
| CTTTCACAGGGCCAACACCC+GGG | + | 32563:14078-14097 | None:intergenic | 60.0% | |
| TCGGCAGAAGGGCTCAACCA+AGG | - | 32563:13144-13163 | MS.gene071503:intron | 60.0% | |
| TTTCACAGGGCCAACACCCG+GGG | + | 32563:14077-14096 | None:intergenic | 60.0% | |
| TGATGTGCAGGCACTCCCCC+GGG | - | 32563:14058-14077 | MS.gene071503:CDS | 65.0% | |
| TTCACAGGGCCAACACCCGG+GGG | + | 32563:14076-14095 | None:intergenic | 65.0% | |
| GCAGGCACTCCCCCGGGTGT+TGG | - | 32563:14064-14083 | MS.gene071503:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32563 | gene | 11839 | 14180 | 11839 | ID=MS.gene071503 |
| 32563 | mRNA | 11839 | 14180 | 11839 | ID=MS.gene071503.t1;Parent=MS.gene071503 |
| 32563 | exon | 14015 | 14180 | 14015 | ID=MS.gene071503.t1.exon1;Parent=MS.gene071503.t1 |
| 32563 | CDS | 14015 | 14180 | 14015 | ID=cds.MS.gene071503.t1;Parent=MS.gene071503.t1 |
| 32563 | exon | 13889 | 13941 | 13889 | ID=MS.gene071503.t1.exon2;Parent=MS.gene071503.t1 |
| 32563 | CDS | 13889 | 13941 | 13889 | ID=cds.MS.gene071503.t1;Parent=MS.gene071503.t1 |
| 32563 | exon | 13656 | 13718 | 13656 | ID=MS.gene071503.t1.exon3;Parent=MS.gene071503.t1 |
| 32563 | CDS | 13656 | 13718 | 13656 | ID=cds.MS.gene071503.t1;Parent=MS.gene071503.t1 |
| 32563 | exon | 12988 | 13038 | 12988 | ID=MS.gene071503.t1.exon4;Parent=MS.gene071503.t1 |
| 32563 | CDS | 12988 | 13038 | 12988 | ID=cds.MS.gene071503.t1;Parent=MS.gene071503.t1 |
| 32563 | exon | 12772 | 12889 | 12772 | ID=MS.gene071503.t1.exon5;Parent=MS.gene071503.t1 |
| 32563 | CDS | 12772 | 12889 | 12772 | ID=cds.MS.gene071503.t1;Parent=MS.gene071503.t1 |
| 32563 | exon | 11839 | 11951 | 11839 | ID=MS.gene071503.t1.exon6;Parent=MS.gene071503.t1 |
| 32563 | CDS | 11839 | 11951 | 11839 | ID=cds.MS.gene071503.t1;Parent=MS.gene071503.t1 |
| Gene Sequence |
| Protein sequence |
