Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037523.t1 | XP_003604737.1 | 98.5 | 607 | 9 | 0 | 1 | 607 | 1 | 607 | 0.00E+00 | 1218 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037523.t1 | Q9M040 | 83.2 | 608 | 96 | 3 | 1 | 607 | 1 | 603 | 2.5e-301 | 1035.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037523.t1 | G7JQ58 | 98.5 | 607 | 9 | 0 | 1 | 607 | 1 | 607 | 0.0e+00 | 1218.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene037523 | MS.gene02654 | PPI |
| MS.gene037523 | MS.gene02655 | PPI |
| MS.gene037523 | MS.gene26127 | PPI |
| MS.gene037523 | MS.gene81957 | PPI |
| MS.gene037523 | MS.gene33522 | PPI |
| MS.gene037523 | MS.gene064505 | PPI |
| MS.gene037523 | MS.gene02651 | PPI |
| MS.gene037523 | MS.gene81956 | PPI |
| MS.gene037523 | MS.gene81954 | PPI |
| MS.gene037523 | MS.gene013678 | PPI |
| MS.gene037523 | MS.gene013671 | PPI |
| MS.gene037523 | MS.gene02488 | PPI |
| MS.gene037523 | MS.gene017382 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037523.t1 | MTR_4g017200 | 98.517 | 607 | 9 | 0 | 1 | 607 | 1 | 607 | 0.0 | 1244 |
| MS.gene037523.t1 | MTR_5g046610 | 98.353 | 607 | 10 | 0 | 1 | 607 | 1 | 607 | 0.0 | 1241 |
| MS.gene037523.t1 | MTR_7g069540 | 85.033 | 608 | 87 | 3 | 1 | 607 | 1 | 605 | 0.0 | 1058 |
| MS.gene037523.t1 | MTR_7g069500 | 82.043 | 607 | 77 | 5 | 1 | 607 | 1 | 575 | 0.0 | 1003 |
| MS.gene037523.t1 | MTR_2g015560 | 79.094 | 574 | 120 | 0 | 34 | 607 | 9 | 582 | 0.0 | 960 |
| MS.gene037523.t1 | MTR_2g009330 | 69.258 | 566 | 173 | 1 | 40 | 604 | 44 | 609 | 0.0 | 863 |
| MS.gene037523.t1 | MTR_5g046620 | 54.545 | 242 | 31 | 4 | 237 | 476 | 1 | 165 | 3.28e-73 | 232 |
| MS.gene037523.t1 | MTR_3g099190 | 24.310 | 580 | 371 | 20 | 22 | 563 | 58 | 607 | 2.25e-22 | 102 |
| MS.gene037523.t1 | MTR_1g011530 | 68.421 | 57 | 15 | 1 | 353 | 409 | 31 | 84 | 4.50e-21 | 89.0 |
| MS.gene037523.t1 | MTR_2g027220 | 23.063 | 555 | 378 | 16 | 40 | 563 | 55 | 591 | 1.98e-18 | 89.7 |
| MS.gene037523.t1 | MTR_2g013120 | 22.530 | 506 | 352 | 15 | 51 | 535 | 88 | 574 | 3.18e-17 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene037523.t1 | AT5G01320 | 83.031 | 607 | 99 | 2 | 1 | 607 | 1 | 603 | 0.0 | 1060 |
| MS.gene037523.t1 | AT4G33070 | 82.266 | 609 | 104 | 4 | 1 | 607 | 1 | 607 | 0.0 | 1052 |
| MS.gene037523.t1 | AT5G54960 | 81.773 | 609 | 107 | 2 | 1 | 607 | 1 | 607 | 0.0 | 1044 |
| MS.gene037523.t1 | AT5G01330 | 82.968 | 593 | 97 | 3 | 17 | 607 | 2 | 592 | 0.0 | 1021 |
| MS.gene037523.t1 | AT3G48560 | 21.875 | 512 | 348 | 14 | 51 | 535 | 103 | 589 | 1.88e-15 | 80.5 |
Find 152 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATTTCATTGGAACATTT+TGG | 0.082189 | 4.3:-82403771 | MS.gene037523:CDS |
| GGGCCTAATTCTAATGATTT+TGG | 0.114847 | 4.3:-82405145 | MS.gene037523:CDS |
| TACTTTGGAGTCAAGGAAAA+TGG | 0.233278 | 4.3:+82404088 | None:intergenic |
| CTGCTTATGAGAATTATTTC+AGG | 0.247181 | 4.3:-82403513 | MS.gene037523:CDS |
| CTATTATTGTTCAGCCTGAT+AGG | 0.293661 | 4.3:-82403624 | MS.gene037523:CDS |
| TCTGAAGTTCACTGAGGATT+AGG | 0.294008 | 4.3:+82402279 | None:intergenic |
| AGAATTCTTCATCATACTAT+TGG | 0.294152 | 4.3:-82405115 | MS.gene037523:CDS |
| GTCCCAAAATCATTAGAATT+AGG | 0.303299 | 4.3:+82405142 | None:intergenic |
| AAGCATAAGCAATCCTTCTT+TGG | 0.307183 | 4.3:+82402387 | None:intergenic |
| CAATTGAACCATATTGCATT+TGG | 0.324923 | 4.3:+82403043 | None:intergenic |
| CGGATATGCTCAAGCTGTTC+CGG | 0.328908 | 4.3:-82402998 | MS.gene037523:CDS |
| AAGAAGATTAATTACCTTAG+TGG | 0.336330 | 4.3:+82402604 | None:intergenic |
| TGAAAATAGGTCCAGCAAAT+AGG | 0.336734 | 4.3:+82403695 | None:intergenic |
| ATTACTTACCCACATCCTTT+TGG | 0.345387 | 4.3:+82403334 | None:intergenic |
| CAAATGCAATATGGTTCAAT+TGG | 0.347964 | 4.3:-82403042 | MS.gene037523:CDS |
| TATGAGTTCCAAATGCAATA+TGG | 0.354912 | 4.3:-82403051 | MS.gene037523:CDS |
| CAGCTTATGCTTATGTAAAC+AGG | 0.355575 | 4.3:+82404157 | None:intergenic |
| GATTTCAAAGGCAAACCTTC+AGG | 0.356531 | 4.3:+82403481 | None:intergenic |
| TCTCCAATCACAACCCTATC+AGG | 0.360164 | 4.3:+82403610 | None:intergenic |
| GAACTGTAATCATTGAAAAT+AGG | 0.370893 | 4.3:+82403682 | None:intergenic |
| GAGGATCACAAACATTTCAT+TGG | 0.372783 | 4.3:-82403781 | MS.gene037523:CDS |
| AAGCAGTATTGTTCCTCTTA+AGG | 0.376245 | 4.3:+82403530 | None:intergenic |
| CAGTTCTTAATCACATTGTA+TGG | 0.381671 | 4.3:+82402680 | None:intergenic |
| CGCTCGCGAAGCGCCTTAAG+AGG | 0.395552 | 4.3:-82403543 | MS.gene037523:CDS |
| GCTGATGCATACCTATTTGC+TGG | 0.395610 | 4.3:-82403706 | MS.gene037523:CDS |
| GAAGCTAGGGATTGGGTTGA+AGG | 0.395680 | 4.3:+82405466 | None:intergenic |
| ATTGGAGATGGTCCTACATT+TGG | 0.399314 | 4.3:-82403595 | MS.gene037523:CDS |
| CTGAACCTAGAGAGCCTTTG+AGG | 0.417588 | 4.3:-82403459 | MS.gene037523:CDS |
| TCAGCTTCGGTTCAGCGATC+AGG | 0.418349 | 4.3:+82405338 | None:intergenic |
| TCTGGAAACACCTAAGTTCC+TGG | 0.424227 | 4.3:+82405077 | None:intergenic |
| TTGCCAGTGATTTGTATTGT+TGG | 0.427170 | 4.3:-82405169 | MS.gene037523:CDS |
| CAAGCAATCACTCGCTTCTC+CGG | 0.431538 | 4.3:+82402979 | None:intergenic |
| ATCATGGATTTCAACTTCAA+TGG | 0.433034 | 4.3:+82402706 | None:intergenic |
| TAGCAAAGAGTTGCTTGAAT+GGG | 0.434683 | 4.3:-82402334 | MS.gene037523:CDS |
| CTGATGGATATGCAAGGTCT+AGG | 0.436168 | 4.3:-82405273 | MS.gene037523:CDS |
| GAAGCAATTCAGACAGCAAC+AGG | 0.436338 | 4.3:-82402411 | MS.gene037523:CDS |
| TTCAGATGAAGCTAGGGATT+GGG | 0.437372 | 4.3:+82405459 | None:intergenic |
| AGTTGCTTGAATGGGGATCA+AGG | 0.443953 | 4.3:-82402326 | MS.gene037523:CDS |
| CTGAAATTGCCAAAAGGATG+TGG | 0.445246 | 4.3:-82403343 | MS.gene037523:CDS |
| AGCGTGATTAATGCAATTGC+TGG | 0.447921 | 4.3:-82405208 | MS.gene037523:CDS |
| CTAGCAAAGAGTTGCTTGAA+TGG | 0.452164 | 4.3:-82402335 | MS.gene037523:CDS |
| GGAGTCAAGGAAAATGGAAC+AGG | 0.453218 | 4.3:+82404094 | None:intergenic |
| TTGTGCCGAGATTGTGGAAT+CGG | 0.455522 | 4.3:-82403728 | MS.gene037523:CDS |
| TTTGGACCGGCTACGAGTAC+TGG | 0.455841 | 4.3:+82403901 | None:intergenic |
| CTAAGTTCCTGGCTAAAATC+AGG | 0.456762 | 4.3:+82405088 | None:intergenic |
| ATTCAGATGAAGCTAGGGAT+TGG | 0.458364 | 4.3:+82405458 | None:intergenic |
| ACCGGGGACGGTGAAAATAT+CGG | 0.459953 | 4.3:+82405387 | None:intergenic |
| GGCAGCAGTGGAAGCAGCTG+CGG | 0.462599 | 4.3:-82403947 | MS.gene037523:CDS |
| GTCGGGCTAGGTGACTTCCT+AGG | 0.464075 | 4.3:+82405431 | None:intergenic |
| CCAGACTGTTACTTGCTACC+AGG | 0.464384 | 4.3:-82405059 | MS.gene037523:intron |
| GAACTGGAATTACACTGGCT+TGG | 0.471453 | 4.3:-82402663 | MS.gene037523:CDS |
| CATTGAGGTGATTGTTCACA+AGG | 0.471803 | 4.3:-82402364 | MS.gene037523:CDS |
| ATGAAATGTTTGTGATCCTC+AGG | 0.472515 | 4.3:+82403784 | None:intergenic |
| ATTGTTAATCAAGAAGATTA+TGG | 0.473966 | 4.3:+82402739 | None:intergenic |
| CAGTGATTTGTATTGTTGGT+GGG | 0.474712 | 4.3:-82405165 | MS.gene037523:CDS |
| TGCTGTAACGAACTGAATGC+TGG | 0.480708 | 4.3:-82405304 | MS.gene037523:CDS |
| CATACAATGTGATTAAGAAC+TGG | 0.481258 | 4.3:-82402679 | MS.gene037523:CDS |
| CAACGTCAGGTTGAAGTCAC+CGG | 0.481721 | 4.3:+82405369 | None:intergenic |
| ATATGCAAGGTCTAGGGGTG+TGG | 0.482988 | 4.3:-82405266 | MS.gene037523:CDS |
| GTTGTTACATTTACTGTTGG+TGG | 0.484847 | 4.3:-82405235 | MS.gene037523:CDS |
| TTAACCCTCAAAGGCTCTCT+AGG | 0.484853 | 4.3:+82403454 | None:intergenic |
| TTGTTACATTTACTGTTGGT+GGG | 0.485744 | 4.3:-82405234 | MS.gene037523:CDS |
| ATTGAGTAATCCAATGGGAT+TGG | 0.486444 | 4.3:-82403971 | MS.gene037523:CDS |
| TGCAATATGGTTCAATTGGA+TGG | 0.486831 | 4.3:-82403038 | MS.gene037523:CDS |
| ACTGCTGCCTCCAATCCCAT+TGG | 0.487915 | 4.3:+82403961 | None:intergenic |
| CCTGGTAGCAAGTAACAGTC+TGG | 0.488780 | 4.3:+82405059 | None:intergenic |
| CTTCCACTAGTCGTCGGGCT+AGG | 0.488846 | 4.3:+82405419 | None:intergenic |
| AAGCTAGGGATTGGGTTGAA+GGG | 0.497192 | 4.3:+82405467 | None:intergenic |
| TTCAATGATTACAGTTCCGT+TGG | 0.497624 | 4.3:-82403676 | MS.gene037523:CDS |
| TCACATTGTATGGTCCATCA+TGG | 0.497871 | 4.3:+82402690 | None:intergenic |
| ACAATGGTCAAGGAAATTGC+TGG | 0.500572 | 4.3:-82402628 | MS.gene037523:CDS |
| CCAGTGATTTGTATTGTTGG+TGG | 0.502339 | 4.3:-82405166 | MS.gene037523:CDS |
| TGATGGATATGCAAGGTCTA+GGG | 0.503579 | 4.3:-82405272 | MS.gene037523:CDS |
| AAAATCTTACTTTGGAGTCA+AGG | 0.503703 | 4.3:+82404081 | None:intergenic |
| CAGCCTGATAGGGTTGTGAT+TGG | 0.505425 | 4.3:-82403613 | MS.gene037523:CDS |
| TCAGGTGGTCGAGCAACGTC+AGG | 0.506171 | 4.3:+82405356 | None:intergenic |
| GCAGATGGCATGACTGAATA+CGG | 0.507160 | 4.3:+82403820 | None:intergenic |
| AGCAATTTCCTTGACCATTG+TGG | 0.508734 | 4.3:+82402630 | None:intergenic |
| GGGTTGATTCAGATGAAGCT+AGG | 0.509627 | 4.3:+82405452 | None:intergenic |
| TGCATGATTCGAGGGATCCT+AGG | 0.513172 | 4.3:+82405557 | None:intergenic |
| GGTTCAATTGGATGGTCTGT+TGG | 0.514958 | 4.3:-82403030 | MS.gene037523:CDS |
| TATTATTGTTCAGCCTGATA+GGG | 0.516594 | 4.3:-82403623 | MS.gene037523:CDS |
| TCAGTCATGCCATCTGCTAA+AGG | 0.517086 | 4.3:-82403814 | MS.gene037523:CDS |
| TATGCAAGGTCTAGGGGTGT+GGG | 0.518468 | 4.3:-82405265 | MS.gene037523:CDS |
| ACAGGTTCGCGACTGAAAGT+AGG | 0.519422 | 4.3:+82404112 | None:intergenic |
| ACCGACTTCCACTAGTCGTC+GGG | 0.522284 | 4.3:+82405414 | None:intergenic |
| TGAACCTAGAGAGCCTTTGA+GGG | 0.523049 | 4.3:-82403458 | MS.gene037523:CDS |
| TCACCTAGCCCGACGACTAG+TGG | 0.525242 | 4.3:-82405422 | MS.gene037523:CDS |
| TGACAGATTGAGTAATCCAA+TGG | 0.525959 | 4.3:-82403977 | MS.gene037523:intron |
| GACAGCAACAGGACCAAAGA+AGG | 0.527928 | 4.3:-82402400 | MS.gene037523:CDS |
| GACAGATTGAGTAATCCAAT+GGG | 0.528687 | 4.3:-82403976 | MS.gene037523:intron |
| ACTGCAGTTATTGCTGAGAC+GGG | 0.528822 | 4.3:-82403391 | MS.gene037523:CDS |
| ATAACAACACCTTCATCAAA+CGG | 0.529906 | 4.3:-82405514 | MS.gene037523:CDS |
| GGCTACGAGTACTGGTTTCA+CGG | 0.530380 | 4.3:+82403909 | None:intergenic |
| TGTGTTGTTACATTTACTGT+TGG | 0.530399 | 4.3:-82405238 | MS.gene037523:CDS |
| AGCTAGGGATTGGGTTGAAG+GGG | 0.531081 | 4.3:+82405468 | None:intergenic |
| TCGGGCTAGGTGACTTCCTA+GGG | 0.531520 | 4.3:+82405432 | None:intergenic |
| AGGAAATTGCTGGACCACTA+AGG | 0.533010 | 4.3:-82402618 | MS.gene037523:intron |
| ATAGGCTGTGGTCAACAACT+TGG | 0.534954 | 4.3:-82404236 | MS.gene037523:intron |
| TGGTCTGTTGGTGCAACTCT+CGG | 0.535873 | 4.3:-82403018 | MS.gene037523:CDS |
| GAGTAATCCAATGGGATTGG+AGG | 0.536971 | 4.3:-82403968 | MS.gene037523:CDS |
| CAAAAGCTGAAATTGCCAAA+AGG | 0.537401 | 4.3:-82403349 | MS.gene037523:CDS |
| GGAATTAGTCCTTTAGCAGA+TGG | 0.539613 | 4.3:+82403805 | None:intergenic |
| CAGGTTCGCGACTGAAAGTA+GGG | 0.539662 | 4.3:+82404113 | None:intergenic |
| AACTGCAGTTATTGCTGAGA+CGG | 0.541604 | 4.3:-82403392 | MS.gene037523:CDS |
| ATCTTCTTGATTAACAATGG+TGG | 0.543934 | 4.3:-82402734 | MS.gene037523:CDS |
| ATCAGCCGATTCCACAATCT+CGG | 0.548115 | 4.3:+82403723 | None:intergenic |
| GTGATTGCTTGCATTGGTGA+TGG | 0.552907 | 4.3:-82402967 | MS.gene037523:CDS |
| AAAAGAACATTAACCCTCAA+AGG | 0.553752 | 4.3:+82403445 | None:intergenic |
| AACGTCAGGTTGAAGTCACC+GGG | 0.554630 | 4.3:+82405370 | None:intergenic |
| AATGGGATTGGAGGCAGCAG+TGG | 0.555789 | 4.3:-82403959 | MS.gene037523:CDS |
| GTTGCTTGAATGGGGATCAA+GGG | 0.556008 | 4.3:-82402325 | MS.gene037523:CDS |
| GGTTGATTCAGATGAAGCTA+GGG | 0.561038 | 4.3:+82405453 | None:intergenic |
| GATAGGGTTGTGATTGGAGA+TGG | 0.564456 | 4.3:-82403607 | MS.gene037523:CDS |
| ATGGTGATTTGCATGATTCG+AGG | 0.568880 | 4.3:+82405548 | None:intergenic |
| ATTGAAGTTGAAATCCATGA+TGG | 0.569661 | 4.3:-82402704 | MS.gene037523:CDS |
| ATCAAAACACATCCAAATGT+AGG | 0.572453 | 4.3:+82403583 | None:intergenic |
| AAGCGAGTGATTGCTTGCAT+TGG | 0.574293 | 4.3:-82402973 | MS.gene037523:CDS |
| GGATTGCTTATGCTTCATTG+AGG | 0.577157 | 4.3:-82402379 | MS.gene037523:CDS |
| GATGCTATCCACAATGGTCA+AGG | 0.577985 | 4.3:-82402638 | MS.gene037523:CDS |
| GAAACAGTGCCGTTTGATGA+AGG | 0.578220 | 4.3:+82405505 | None:intergenic |
| ATAATCTTCTTGATTAACAA+TGG | 0.579911 | 4.3:-82402737 | MS.gene037523:CDS |
| GTTGTTATTATGTCGTTGCA+TGG | 0.581178 | 4.3:+82405529 | None:intergenic |
| CCACCAACAATACAAATCAC+TGG | 0.581447 | 4.3:+82405166 | None:intergenic |
| TGCAGTTATTGCTGAGACGG+GGG | 0.584886 | 4.3:-82403389 | MS.gene037523:CDS |
| GCTTCATCTGAATCAACCCT+AGG | 0.588476 | 4.3:-82405448 | MS.gene037523:CDS |
| ATTAAGAACTGGAATTACAC+TGG | 0.592024 | 4.3:-82402668 | MS.gene037523:CDS |
| GAAGTTCACTGAGGATTAGG+AGG | 0.592723 | 4.3:+82402282 | None:intergenic |
| TACCGACTTCCACTAGTCGT+CGG | 0.594116 | 4.3:+82405413 | None:intergenic |
| CTGTCCACATCTCAGCATTG+TGG | 0.594204 | 4.3:+82402766 | None:intergenic |
| TGGTGATTTGCATGATTCGA+GGG | 0.596910 | 4.3:+82405549 | None:intergenic |
| AATGCTGGATATGCTGCTGA+TGG | 0.598505 | 4.3:-82405289 | MS.gene037523:CDS |
| CAGGTTGAAGTCACCGGGGA+CGG | 0.598846 | 4.3:+82405375 | None:intergenic |
| ACTGAAAGTAGGGTGAGGAA+TGG | 0.602836 | 4.3:+82404123 | None:intergenic |
| TCTCTAGGTTCAGATTTCAA+AGG | 0.609595 | 4.3:+82403469 | None:intergenic |
| GCTTCGGTTCAGCGATCAGG+TGG | 0.616013 | 4.3:+82405341 | None:intergenic |
| TTCAACATGGACACAAACCT+AGG | 0.622509 | 4.3:-82405574 | None:intergenic |
| AGCAAAGAGTTGCTTGAATG+GGG | 0.623231 | 4.3:-82402333 | MS.gene037523:CDS |
| TCGCGACTGAAAGTAGGGTG+AGG | 0.630951 | 4.3:+82404118 | None:intergenic |
| CTGCAGTTATTGCTGAGACG+GGG | 0.631097 | 4.3:-82403390 | MS.gene037523:CDS |
| TGAAATTGCCAAAAGGATGT+GGG | 0.632720 | 4.3:-82403342 | MS.gene037523:intron |
| GTGAAACCAGTACTCGTAGC+CGG | 0.635638 | 4.3:-82403907 | MS.gene037523:CDS |
| TTATATGTAGGTGACAGCAC+AGG | 0.638117 | 4.3:-82402795 | MS.gene037523:intron |
| CAAAAGAAGCGAGTAACCAA+CGG | 0.647448 | 4.3:+82403660 | None:intergenic |
| GTTTCCACAATGCTGAGATG+TGG | 0.650310 | 4.3:-82402770 | MS.gene037523:CDS |
| TGCTAAAGGACTAATTCCTG+AGG | 0.659904 | 4.3:-82403800 | MS.gene037523:CDS |
| GATGGATATGCAAGGTCTAG+GGG | 0.660780 | 4.3:-82405271 | MS.gene037523:CDS |
| GCCCGACGACTAGTGGAAGT+CGG | 0.688394 | 4.3:-82405415 | MS.gene037523:CDS |
| TAAATTTCTGAAGTTCACTG+AGG | 0.695310 | 4.3:+82402273 | None:intergenic |
| TTGGTTGATGCTATCCACAA+TGG | 0.702445 | 4.3:-82402644 | MS.gene037523:CDS |
| ATGCTGCTGATGGATATGCA+AGG | 0.712084 | 4.3:-82405279 | MS.gene037523:CDS |
| ACGTCAGGTTGAAGTCACCG+GGG | 0.796174 | 4.3:+82405371 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAAAATAAAAAT+AGG | + | chr4.3:82402848-82402867 | None:intergenic | 0.0% |
| !!! | TTTTTTTATTTTTTATTTTT+AGG | - | chr4.3:82402855-82402874 | MS.gene037523:intron | 0.0% |
| !! | TTATAAAACTATTATTATCA+GGG | + | chr4.3:82402976-82402995 | None:intergenic | 10.0% |
| !! | TTTATAAAACTATTATTATC+AGG | + | chr4.3:82402977-82402996 | None:intergenic | 10.0% |
| !! | AAAAATGTAATAGCAAAATT+TGG | + | chr4.3:82404980-82404999 | None:intergenic | 15.0% |
| !! | AAATTATAATAAGACAGATT+TGG | + | chr4.3:82403338-82403357 | None:intergenic | 15.0% |
| !! | ATGGTTATTAAATTATATGT+AGG | - | chr4.3:82405048-82405067 | MS.gene037523:intron | 15.0% |
| !! | CAAAAAAAAATAACATAACA+AGG | + | chr4.3:82404750-82404769 | None:intergenic | 15.0% |
| !! | TTGTAATATTATAATATGGT+TGG | - | chr4.3:82403280-82403299 | MS.gene037523:intron | 15.0% |
| !! | TTTATATATTTGATTATGGT+AGG | - | chr4.3:82405398-82405417 | MS.gene037523:CDS | 15.0% |
| !! | TTTCAAATCTTATAAGTAAA+AGG | + | chr4.3:82402927-82402946 | None:intergenic | 15.0% |
| !!! | AAATCTGTCTTATTATAATT+TGG | - | chr4.3:82403337-82403356 | MS.gene037523:intron | 15.0% |
| !!! | AAGTAAAATCAATATTTTCA+AGG | - | chr4.3:82403380-82403399 | MS.gene037523:CDS | 15.0% |
| !!! | TATAAAAAGTTTTCAAGTAT+AGG | - | chr4.3:82403111-82403130 | MS.gene037523:intron | 15.0% |
| !!! | TGTAGCATATTTTAATAAAA+AGG | - | chr4.3:82404768-82404787 | MS.gene037523:intron | 15.0% |
| !! | AATCTGTCAAAAGTTATTAT+TGG | + | chr4.3:82403867-82403886 | None:intergenic | 20.0% |
| !! | ATAATCTTCTTGATTAACAA+TGG | - | chr4.3:82405118-82405137 | MS.gene037523:CDS | 20.0% |
| !! | ATTATTAAGTAAAAGCTTAG+AGG | + | chr4.3:82405004-82405023 | None:intergenic | 20.0% |
| !! | ATTGTTAATCAAGAAGATTA+TGG | + | chr4.3:82405119-82405138 | None:intergenic | 20.0% |
| !! | TTATGAGTAAAATCTTACTT+TGG | + | chr4.3:82403785-82403804 | None:intergenic | 20.0% |
| !!! | AACTGATTAAACTGTTTTTA+TGG | - | chr4.3:82405029-82405048 | MS.gene037523:intron | 20.0% |
| !!! | AGCTTATAGAATTTGATTTT+TGG | - | chr4.3:82404544-82404563 | MS.gene037523:intron | 20.0% |
| !!! | ATAAGATTTGGTTTACTATT+TGG | - | chr4.3:82403475-82403494 | MS.gene037523:CDS | 20.0% |
| !!! | TAGAATTTGATTTTTGGTAT+TGG | - | chr4.3:82404550-82404569 | MS.gene037523:intron | 20.0% |
| !!! | TCTTAATTTCATTTTTGACT+TGG | - | chr4.3:82403827-82403846 | MS.gene037523:CDS | 20.0% |
| ! | AAACCAAATCTTATCGAATA+TGG | + | chr4.3:82403469-82403488 | None:intergenic | 25.0% |
| ! | AAGAAGATTAATTACCTTAG+TGG | + | chr4.3:82405254-82405273 | None:intergenic | 25.0% |
| ! | AGAATTCTTCATCATACTAT+TGG | - | chr4.3:82402740-82402759 | MS.gene037523:CDS | 25.0% |
| ! | ATATGATTGCTCAATTTGAA+TGG | - | chr4.3:82403440-82403459 | MS.gene037523:CDS | 25.0% |
| ! | ATGTATTATTGTTGTGTTGT+TGG | - | chr4.3:82403026-82403045 | MS.gene037523:CDS | 25.0% |
| ! | ATTGATTGACTGTGTTAAAA+TGG | - | chr4.3:82403574-82403593 | MS.gene037523:CDS | 25.0% |
| ! | GAACTGTAATCATTGAAAAT+AGG | + | chr4.3:82404176-82404195 | None:intergenic | 25.0% |
| ! | TAAAATGGCTTATATGTACT+TGG | - | chr4.3:82403589-82403608 | MS.gene037523:CDS | 25.0% |
| ! | TTTGAAAAAAATAGTGACAC+TGG | - | chr4.3:82402940-82402959 | MS.gene037523:intron | 25.0% |
| !! | AACATTTCATTGGAACATTT+TGG | - | chr4.3:82404084-82404103 | MS.gene037523:intron | 25.0% |
| !! | ACATTTCATTGGAACATTTT+GGG | - | chr4.3:82404085-82404104 | MS.gene037523:intron | 25.0% |
| !! | TATGTACTTGGTTTGATTAT+AGG | - | chr4.3:82403601-82403620 | MS.gene037523:CDS | 25.0% |
| !!! | AAAGTTTTCAAGTATAGGTT+CGG | - | chr4.3:82403116-82403135 | MS.gene037523:intron | 25.0% |
| !!! | CTCATAAATCTGCATTTTTT+TGG | - | chr4.3:82403531-82403550 | MS.gene037523:CDS | 25.0% |
| AAAAGAACATTAACCCTCAA+AGG | + | chr4.3:82404413-82404432 | None:intergenic | 30.0% | |
| ATAACAACACCTTCATCAAA+CGG | - | chr4.3:82402341-82402360 | MS.gene037523:CDS | 30.0% | |
| ATCAAAACACATCCAAATGT+AGG | + | chr4.3:82404275-82404294 | None:intergenic | 30.0% | |
| ATCATGGATTTCAACTTCAA+TGG | + | chr4.3:82405152-82405171 | None:intergenic | 30.0% | |
| ATCTTCTTGATTAACAATGG+TGG | - | chr4.3:82405121-82405140 | MS.gene037523:CDS | 30.0% | |
| ATGCAGATTTATGAGAAGAA+AGG | + | chr4.3:82403526-82403545 | None:intergenic | 30.0% | |
| ATGTTTCCAATATGAAGTGT+CGG | - | chr4.3:82405349-82405368 | MS.gene037523:CDS | 30.0% | |
| ATTAAGAACTGGAATTACAC+TGG | - | chr4.3:82405187-82405206 | MS.gene037523:CDS | 30.0% | |
| ATTGAAGTTGAAATCCATGA+TGG | - | chr4.3:82405151-82405170 | MS.gene037523:CDS | 30.0% | |
| CAAATGCAATATGGTTCAAT+TGG | - | chr4.3:82404813-82404832 | MS.gene037523:intron | 30.0% | |
| CAATTGAACCATATTGCATT+TGG | + | chr4.3:82404815-82404834 | None:intergenic | 30.0% | |
| CAGTTCTTAATCACATTGTA+TGG | + | chr4.3:82405178-82405197 | None:intergenic | 30.0% | |
| CATACAATGTGATTAAGAAC+TGG | - | chr4.3:82405176-82405195 | MS.gene037523:CDS | 30.0% | |
| CTGCTTATGAGAATTATTTC+AGG | - | chr4.3:82404342-82404361 | MS.gene037523:intron | 30.0% | |
| GTCCCAAAATCATTAGAATT+AGG | + | chr4.3:82402716-82402735 | None:intergenic | 30.0% | |
| TATGAGTTCCAAATGCAATA+TGG | - | chr4.3:82404804-82404823 | MS.gene037523:intron | 30.0% | |
| TATTATTGTTCAGCCTGATA+GGG | - | chr4.3:82404232-82404251 | MS.gene037523:CDS | 30.0% | |
| TGCATTTAACTACAATTCTC+TGG | + | chr4.3:82404621-82404640 | None:intergenic | 30.0% | |
| TGTCCATATTCGATAAGATT+TGG | - | chr4.3:82403463-82403482 | MS.gene037523:CDS | 30.0% | |
| TTGTTACATTTACTGTTGGT+GGG | - | chr4.3:82402621-82402640 | MS.gene037523:CDS | 30.0% | |
| TTTCATACCTATACTAGCTA+AGG | + | chr4.3:82402881-82402900 | None:intergenic | 30.0% | |
| ! | ATTTTACCGACACTTCATAT+TGG | + | chr4.3:82405358-82405377 | None:intergenic | 30.0% |
| ! | CATTTCATTGGAACATTTTG+GGG | - | chr4.3:82404086-82404105 | MS.gene037523:intron | 30.0% |
| ! | GGCCTAATTCTAATGATTTT+GGG | - | chr4.3:82402711-82402730 | MS.gene037523:CDS | 30.0% |
| ! | TGTGTTGTTACATTTACTGT+TGG | - | chr4.3:82402617-82402636 | MS.gene037523:intron | 30.0% |
| !! | AAAATCTTACTTTGGAGTCA+AGG | + | chr4.3:82403777-82403796 | None:intergenic | 30.0% |
| !!! | ATTTGGATGTGTTTTGATGA+AGG | - | chr4.3:82404277-82404296 | MS.gene037523:intron | 30.0% |
| AAAAATAGTGACACTGGCAT+AGG | - | chr4.3:82402946-82402965 | MS.gene037523:intron | 35.0% | |
| AAGCAGTATTGTTCCTCTTA+AGG | + | chr4.3:82404328-82404347 | None:intergenic | 35.0% | |
| AAGCATAAGCAATCCTTCTT+TGG | + | chr4.3:82405471-82405490 | None:intergenic | 35.0% | |
| ATGAAATGTTTGTGATCCTC+AGG | + | chr4.3:82404074-82404093 | None:intergenic | 35.0% | |
| ATTGAGTAATCCAATGGGAT+TGG | - | chr4.3:82403884-82403903 | MS.gene037523:CDS | 35.0% | |
| CAAAAGCTGAAATTGCCAAA+AGG | - | chr4.3:82404506-82404525 | MS.gene037523:intron | 35.0% | |
| CAGCTTATGCTTATGTAAAC+AGG | + | chr4.3:82403701-82403720 | None:intergenic | 35.0% | |
| CTATTATTGTTCAGCCTGAT+AGG | - | chr4.3:82404231-82404250 | MS.gene037523:CDS | 35.0% | |
| GACAGATTGAGTAATCCAAT+GGG | - | chr4.3:82403879-82403898 | MS.gene037523:CDS | 35.0% | |
| GAGGATCACAAACATTTCAT+TGG | - | chr4.3:82404074-82404093 | MS.gene037523:intron | 35.0% | |
| GTTGTTACATTTACTGTTGG+TGG | - | chr4.3:82402620-82402639 | MS.gene037523:CDS | 35.0% | |
| TAGCAAAGAGTTGCTTGAAT+GGG | - | chr4.3:82405521-82405540 | MS.gene037523:CDS | 35.0% | |
| TCTCTAGGTTCAGATTTCAA+AGG | + | chr4.3:82404389-82404408 | None:intergenic | 35.0% | |
| TGAAAATAGGTCCAGCAAAT+AGG | + | chr4.3:82404163-82404182 | None:intergenic | 35.0% | |
| TGAAATTGCCAAAAGGATGT+GGG | - | chr4.3:82404513-82404532 | MS.gene037523:intron | 35.0% | |
| TGACAGATTGAGTAATCCAA+TGG | - | chr4.3:82403878-82403897 | MS.gene037523:CDS | 35.0% | |
| TGCAATATGGTTCAATTGGA+TGG | - | chr4.3:82404817-82404836 | MS.gene037523:intron | 35.0% | |
| TTCAATGATTACAGTTCCGT+TGG | - | chr4.3:82404179-82404198 | MS.gene037523:CDS | 35.0% | |
| ! | ATTACTTACCCACATCCTTT+TGG | + | chr4.3:82404524-82404543 | None:intergenic | 35.0% |
| ! | CAGTGATTTGTATTGTTGGT+GGG | - | chr4.3:82402690-82402709 | MS.gene037523:CDS | 35.0% |
| ! | CTTTTGGCAATTTCAGCTTT+TGG | + | chr4.3:82404508-82404527 | None:intergenic | 35.0% |
| ! | GGGCCTAATTCTAATGATTT+TGG | - | chr4.3:82402710-82402729 | MS.gene037523:CDS | 35.0% |
| ! | GTTGTTATTATGTCGTTGCA+TGG | + | chr4.3:82402329-82402348 | None:intergenic | 35.0% |
| ! | TTCAGGATTTTTGTTCCTGA+AGG | - | chr4.3:82404359-82404378 | MS.gene037523:intron | 35.0% |
| ! | TTGCCAGTGATTTGTATTGT+TGG | - | chr4.3:82402686-82402705 | MS.gene037523:CDS | 35.0% |
| ! | TTTTAGGCCTTAGCTAGTAT+AGG | - | chr4.3:82402871-82402890 | MS.gene037523:intron | 35.0% |
| !! | AGAGAGATTGAGTTGAGATT+TGG | + | chr4.3:82402823-82402842 | None:intergenic | 35.0% |
| !! | TACTTTGGAGTCAAGGAAAA+TGG | + | chr4.3:82403770-82403789 | None:intergenic | 35.0% |
| !! | TTACTCGCTTCTTTTGAAGA+AGG | - | chr4.3:82404202-82404221 | MS.gene037523:CDS | 35.0% |
| AACTGCAGTTATTGCTGAGA+CGG | - | chr4.3:82404463-82404482 | MS.gene037523:intron | 40.0% | |
| ACAATGGTCAAGGAAATTGC+TGG | - | chr4.3:82405227-82405246 | MS.gene037523:CDS | 40.0% | |
| AGCAAAGAGTTGCTTGAATG+GGG | - | chr4.3:82405522-82405541 | MS.gene037523:CDS | 40.0% | |
| AGCAATTTCCTTGACCATTG+TGG | + | chr4.3:82405228-82405247 | None:intergenic | 40.0% | |
| AGCGTGATTAATGCAATTGC+TGG | - | chr4.3:82402647-82402666 | MS.gene037523:CDS | 40.0% | |
| AGCTTATGTGACCTTAATCG+CGG | - | chr4.3:82404647-82404666 | MS.gene037523:intron | 40.0% | |
| ATTCAGATGAAGCTAGGGAT+TGG | + | chr4.3:82402400-82402419 | None:intergenic | 40.0% | |
| ATTGGAGATGGTCCTACATT+TGG | - | chr4.3:82404260-82404279 | MS.gene037523:intron | 40.0% | |
| CAAAAGAAGCGAGTAACCAA+CGG | + | chr4.3:82404198-82404217 | None:intergenic | 40.0% | |
| CATTGAGGTGATTGTTCACA+AGG | - | chr4.3:82405491-82405510 | MS.gene037523:CDS | 40.0% | |
| CCACCAACAATACAAATCAC+TGG | + | chr4.3:82402692-82402711 | None:intergenic | 40.0% | |
| CTAAGTTCCTGGCTAAAATC+AGG | + | chr4.3:82402770-82402789 | None:intergenic | 40.0% | |
| CTAGCAAAGAGTTGCTTGAA+TGG | - | chr4.3:82405520-82405539 | MS.gene037523:CDS | 40.0% | |
| CTGAAATTGCCAAAAGGATG+TGG | - | chr4.3:82404512-82404531 | MS.gene037523:intron | 40.0% | |
| GATTTCAAAGGCAAACCTTC+AGG | + | chr4.3:82404377-82404396 | None:intergenic | 40.0% | |
| GGAATTAGTCCTTTAGCAGA+TGG | + | chr4.3:82404053-82404072 | None:intergenic | 40.0% | |
| GGATTGCTTATGCTTCATTG+AGG | - | chr4.3:82405476-82405495 | MS.gene037523:CDS | 40.0% | |
| TCACATTGTATGGTCCATCA+TGG | + | chr4.3:82405168-82405187 | None:intergenic | 40.0% | |
| TGCTAAAGGACTAATTCCTG+AGG | - | chr4.3:82404055-82404074 | MS.gene037523:intron | 40.0% | |
| TTATATGTAGGTGACAGCAC+AGG | - | chr4.3:82405060-82405079 | MS.gene037523:CDS | 40.0% | |
| TTCAGATGAAGCTAGGGATT+GGG | + | chr4.3:82402399-82402418 | None:intergenic | 40.0% | |
| ! | ATGGTAGGTCTTTTGTGAAG+AGG | - | chr4.3:82405413-82405432 | MS.gene037523:CDS | 40.0% |
| ! | ATGGTGATTTGCATGATTCG+AGG | + | chr4.3:82402310-82402329 | None:intergenic | 40.0% |
| ! | CCAGTGATTTGTATTGTTGG+TGG | - | chr4.3:82402689-82402708 | MS.gene037523:CDS | 40.0% |
| ! | CTTGGTTTGATTATAGGCTG+TGG | - | chr4.3:82403607-82403626 | MS.gene037523:CDS | 40.0% |
| ! | GCTTTTGCTACTCGTAGTTT+TGG | + | chr4.3:82403975-82403994 | None:intergenic | 40.0% |
| ! | GGTTGATTCAGATGAAGCTA+GGG | + | chr4.3:82402405-82402424 | None:intergenic | 40.0% |
| ! | TGATGGATATGCAAGGTCTA+GGG | - | chr4.3:82402583-82402602 | MS.gene037523:intron | 40.0% |
| ! | TGGTGATTTGCATGATTCGA+GGG | + | chr4.3:82402309-82402328 | None:intergenic | 40.0% |
| ! | TTGGTTGATGCTATCCACAA+TGG | - | chr4.3:82405211-82405230 | MS.gene037523:CDS | 40.0% |
| !! | ATTGAGTTGAGATTTGGACC+TGG | + | chr4.3:82402817-82402836 | None:intergenic | 40.0% |
| !! | CAACCAACGTTTTTCAGCTT+CGG | + | chr4.3:82402533-82402552 | None:intergenic | 40.0% |
| !! | CTGATTTTAGCCAGGAACTT+AGG | - | chr4.3:82402768-82402787 | MS.gene037523:CDS | 40.0% |
| !! | TGAAGGGGATTTTTGGATTG+TGG | + | chr4.3:82402375-82402394 | None:intergenic | 40.0% |
| !!! | ATTGGGTTGAAGGGGATTTT+TGG | + | chr4.3:82402382-82402401 | None:intergenic | 40.0% |
| !!! | CATTGGTGATGGAAGTTTTC+AGG | - | chr4.3:82404899-82404918 | MS.gene037523:intron | 40.0% |
| AAGCGAGTGATTGCTTGCAT+TGG | - | chr4.3:82404882-82404901 | MS.gene037523:intron | 45.0% | |
| AATAGTGACACTGGCATAGG+TGG | - | chr4.3:82402949-82402968 | MS.gene037523:intron | 45.0% | |
| AATGCTGGATATGCTGCTGA+TGG | - | chr4.3:82402566-82402585 | MS.gene037523:intron | 45.0% | |
| ACTGAAAGTAGGGTGAGGAA+TGG | + | chr4.3:82403735-82403754 | None:intergenic | 45.0% | |
| ACTGCAGTTATTGCTGAGAC+GGG | - | chr4.3:82404464-82404483 | MS.gene037523:intron | 45.0% | |
| AGGAAATTGCTGGACCACTA+AGG | - | chr4.3:82405237-82405256 | MS.gene037523:CDS | 45.0% | |
| AGTTGCTTGAATGGGGATCA+AGG | - | chr4.3:82405529-82405548 | MS.gene037523:CDS | 45.0% | |
| ATAGGCTGTGGTCAACAACT+TGG | - | chr4.3:82403619-82403638 | MS.gene037523:CDS | 45.0% | |
| CATGTTTGATCTCACGTGTC+AGG | - | chr4.3:82403066-82403085 | MS.gene037523:intron | 45.0% | |
| GAACCGAAGCTGAAAAACGT+TGG | - | chr4.3:82402527-82402546 | MS.gene037523:intron | 45.0% | |
| GAAGCAATTCAGACAGCAAC+AGG | - | chr4.3:82405444-82405463 | MS.gene037523:CDS | 45.0% | |
| GAGTAATCCAATGGGATTGG+AGG | - | chr4.3:82403887-82403906 | MS.gene037523:CDS | 45.0% | |
| GATAGGGTTGTGATTGGAGA+TGG | - | chr4.3:82404248-82404267 | MS.gene037523:intron | 45.0% | |
| GATGCTATCCACAATGGTCA+AGG | - | chr4.3:82405217-82405236 | MS.gene037523:CDS | 45.0% | |
| GATGGATATGCAAGGTCTAG+GGG | - | chr4.3:82402584-82402603 | MS.gene037523:intron | 45.0% | |
| GCAGATGGCATGACTGAATA+CGG | + | chr4.3:82404038-82404057 | None:intergenic | 45.0% | |
| GCTGATGCATACCTATTTGC+TGG | - | chr4.3:82404149-82404168 | MS.gene037523:CDS | 45.0% | |
| GCTTCATCTGAATCAACCCT+AGG | - | chr4.3:82402407-82402426 | MS.gene037523:CDS | 45.0% | |
| GGAGTCAAGGAAAATGGAAC+AGG | + | chr4.3:82403764-82403783 | None:intergenic | 45.0% | |
| GGTTCAATTGGATGGTCTGT+TGG | - | chr4.3:82404825-82404844 | MS.gene037523:intron | 45.0% | |
| GTTGCTTGAATGGGGATCAA+GGG | - | chr4.3:82405530-82405549 | MS.gene037523:CDS | 45.0% | |
| GTTTCCACAATGCTGAGATG+TGG | - | chr4.3:82405085-82405104 | MS.gene037523:CDS | 45.0% | |
| TCAGTCATGCCATCTGCTAA+AGG | - | chr4.3:82404041-82404060 | MS.gene037523:intron | 45.0% | |
| TCTCCAATCACAACCCTATC+AGG | + | chr4.3:82404248-82404267 | None:intergenic | 45.0% | |
| TCTGGAAACACCTAAGTTCC+TGG | + | chr4.3:82402781-82402800 | None:intergenic | 45.0% | |
| TGAACCTAGAGAGCCTTTGA+GGG | - | chr4.3:82404397-82404416 | MS.gene037523:intron | 45.0% | |
| TGCTGTAACGAACTGAATGC+TGG | - | chr4.3:82402551-82402570 | MS.gene037523:intron | 45.0% | |
| TTAACCCTCAAAGGCTCTCT+AGG | + | chr4.3:82404404-82404423 | None:intergenic | 45.0% | |
| TTGTGCCGAGATTGTGGAAT+CGG | - | chr4.3:82404127-82404146 | MS.gene037523:CDS | 45.0% | |
| ! | ATCAGCCGATTCCACAATCT+CGG | + | chr4.3:82404135-82404154 | None:intergenic | 45.0% |
| ! | ATGCTGCTGATGGATATGCA+AGG | - | chr4.3:82402576-82402595 | MS.gene037523:intron | 45.0% |
| ! | CTGATGGATATGCAAGGTCT+AGG | - | chr4.3:82402582-82402601 | MS.gene037523:intron | 45.0% |
| ! | GAACTGGAATTACACTGGCT+TGG | - | chr4.3:82405192-82405211 | MS.gene037523:CDS | 45.0% |
| ! | GGGTTGATTCAGATGAAGCT+AGG | + | chr4.3:82402406-82402425 | None:intergenic | 45.0% |
| ! | GTGATTGCTTGCATTGGTGA+TGG | - | chr4.3:82404888-82404907 | MS.gene037523:intron | 45.0% |
| ! | TGAAGCACTAACACAGACTC+TGG | - | chr4.3:82405319-82405338 | MS.gene037523:CDS | 45.0% |
| ! | TGCATTTTGTGCCGAGATTG+TGG | - | chr4.3:82404121-82404140 | MS.gene037523:CDS | 45.0% |
| !! | AAGCTAGGGATTGGGTTGAA+GGG | + | chr4.3:82402391-82402410 | None:intergenic | 45.0% |
| !! | GAAACAGTGCCGTTTGATGA+AGG | + | chr4.3:82402353-82402372 | None:intergenic | 45.0% |
| !! | TGGTTTGCCTGATTTTAGCC+AGG | - | chr4.3:82402760-82402779 | MS.gene037523:CDS | 45.0% |
| !!! | TGCTACTCGTAGTTTTGGAC+CGG | + | chr4.3:82403970-82403989 | None:intergenic | 45.0% |
| !! | ATTATTGTAATATTATAATA+TGG | - | chr4.3:82403276-82403295 | MS.gene037523:intron | 5.0% |
| !! | TTAATTTATATATTTGATTA+TGG | - | chr4.3:82405394-82405413 | MS.gene037523:CDS | 5.0% |
| ACAGGTTCGCGACTGAAAGT+AGG | + | chr4.3:82403746-82403765 | None:intergenic | 50.0% | |
| ACCGGGGACGGTGAAAATAT+CGG | + | chr4.3:82402471-82402490 | None:intergenic | 50.0% | |
| ATATGCAAGGTCTAGGGGTG+TGG | - | chr4.3:82402589-82402608 | MS.gene037523:intron | 50.0% | |
| CAAGCAATCACTCGCTTCTC+CGG | + | chr4.3:82404879-82404898 | None:intergenic | 50.0% | |
| CAGCCTGATAGGGTTGTGAT+TGG | - | chr4.3:82404242-82404261 | MS.gene037523:intron | 50.0% | |
| CAGGTTCGCGACTGAAAGTA+GGG | + | chr4.3:82403745-82403764 | None:intergenic | 50.0% | |
| CCTCAATGCAACCGCGATTA+AGG | + | chr4.3:82404661-82404680 | None:intergenic | 50.0% | |
| CCTGGTAGCAAGTAACAGTC+TGG | + | chr4.3:82402799-82402818 | None:intergenic | 50.0% | |
| CCTTAATCGCGGTTGCATTG+AGG | - | chr4.3:82404658-82404677 | MS.gene037523:intron | 50.0% | |
| CGGATATGCTCAAGCTGTTC+CGG | - | chr4.3:82404857-82404876 | MS.gene037523:intron | 50.0% | |
| CGGTTGCATTGAGGTCACAT+AGG | - | chr4.3:82404667-82404686 | MS.gene037523:intron | 50.0% | |
| CTGAACCTAGAGAGCCTTTG+AGG | - | chr4.3:82404396-82404415 | MS.gene037523:intron | 50.0% | |
| CTGCAGTTATTGCTGAGACG+GGG | - | chr4.3:82404465-82404484 | MS.gene037523:intron | 50.0% | |
| CTGTCCACATCTCAGCATTG+TGG | + | chr4.3:82405092-82405111 | None:intergenic | 50.0% | |
| GACAGCAACAGGACCAAAGA+AGG | - | chr4.3:82405455-82405474 | MS.gene037523:CDS | 50.0% | |
| GTGAAACCAGTACTCGTAGC+CGG | - | chr4.3:82403948-82403967 | MS.gene037523:CDS | 50.0% | |
| TGCAGTTATTGCTGAGACGG+GGG | - | chr4.3:82404466-82404485 | MS.gene037523:intron | 50.0% | |
| TGCATGATTCGAGGGATCCT+AGG | + | chr4.3:82402301-82402320 | None:intergenic | 50.0% | |
| TGGTCTGTTGGTGCAACTCT+CGG | - | chr4.3:82404837-82404856 | MS.gene037523:intron | 50.0% | |
| ! | ACCGATATTTTCACCGTCCC+CGG | - | chr4.3:82402467-82402486 | MS.gene037523:intron | 50.0% |
| ! | CCAGACTGTTACTTGCTACC+AGG | - | chr4.3:82402796-82402815 | MS.gene037523:intron | 50.0% |
| ! | TATGCAAGGTCTAGGGGTGT+GGG | - | chr4.3:82402590-82402609 | MS.gene037523:intron | 50.0% |
| !! | AACGTCAGGTTGAAGTCACC+GGG | + | chr4.3:82402488-82402507 | None:intergenic | 50.0% |
| !! | AGCTAGGGATTGGGTTGAAG+GGG | + | chr4.3:82402390-82402409 | None:intergenic | 50.0% |
| !! | CAACGTCAGGTTGAAGTCAC+CGG | + | chr4.3:82402489-82402508 | None:intergenic | 50.0% |
| !! | GAAGCTAGGGATTGGGTTGA+AGG | + | chr4.3:82402392-82402411 | None:intergenic | 50.0% |
| !! | GGCTACGAGTACTGGTTTCA+CGG | + | chr4.3:82403949-82403968 | None:intergenic | 50.0% |
| !! | TACCGACTTCCACTAGTCGT+CGG | + | chr4.3:82402445-82402464 | None:intergenic | 50.0% |
| AATGGGATTGGAGGCAGCAG+TGG | - | chr4.3:82403896-82403915 | MS.gene037523:CDS | 55.0% | |
| ACTGCTGCCTCCAATCCCAT+TGG | + | chr4.3:82403897-82403916 | None:intergenic | 55.0% | |
| TCAGCTTCGGTTCAGCGATC+AGG | + | chr4.3:82402520-82402539 | None:intergenic | 55.0% | |
| TCGCGACTGAAAGTAGGGTG+AGG | + | chr4.3:82403740-82403759 | None:intergenic | 55.0% | |
| TTTGGACCGGCTACGAGTAC+TGG | + | chr4.3:82403957-82403976 | None:intergenic | 55.0% | |
| ! | ACCGACTTCCACTAGTCGTC+GGG | + | chr4.3:82402444-82402463 | None:intergenic | 55.0% |
| ! | TCGGGCTAGGTGACTTCCTA+GGG | + | chr4.3:82402426-82402445 | None:intergenic | 55.0% |
| !! | ACGTCAGGTTGAAGTCACCG+GGG | + | chr4.3:82402487-82402506 | None:intergenic | 55.0% |
| CTTCCACTAGTCGTCGGGCT+AGG | + | chr4.3:82402439-82402458 | None:intergenic | 60.0% | |
| GCCCGACGACTAGTGGAAGT+CGG | - | chr4.3:82402440-82402459 | MS.gene037523:intron | 60.0% | |
| GCTTCGGTTCAGCGATCAGG+TGG | + | chr4.3:82402517-82402536 | None:intergenic | 60.0% | |
| TCACCTAGCCCGACGACTAG+TGG | - | chr4.3:82402433-82402452 | MS.gene037523:CDS | 60.0% | |
| TCAGGTGGTCGAGCAACGTC+AGG | + | chr4.3:82402502-82402521 | None:intergenic | 60.0% | |
| TTGCTGAGACGGGGGACTCT+TGG | - | chr4.3:82404474-82404493 | MS.gene037523:intron | 60.0% | |
| ! | CAGGTTGAAGTCACCGGGGA+CGG | + | chr4.3:82402483-82402502 | None:intergenic | 60.0% |
| ! | GTCGGGCTAGGTGACTTCCT+AGG | + | chr4.3:82402427-82402446 | None:intergenic | 60.0% |
| GGCAGCAGTGGAAGCAGCTG+CGG | - | chr4.3:82403908-82403927 | MS.gene037523:CDS | 65.0% | |
| ! | CGCTCGCGAAGCGCCTTAAG+AGG | - | chr4.3:82404312-82404331 | MS.gene037523:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 82402287 | 82405590 | 82402287 | ID=MS.gene037523 |
| chr4.3 | mRNA | 82402287 | 82405590 | 82402287 | ID=MS.gene037523.t1;Parent=MS.gene037523 |
| chr4.3 | exon | 82405060 | 82405590 | 82405060 | ID=MS.gene037523.t1.exon1;Parent=MS.gene037523.t1 |
| chr4.3 | CDS | 82405060 | 82405590 | 82405060 | ID=cds.MS.gene037523.t1;Parent=MS.gene037523.t1 |
| chr4.3 | exon | 82404091 | 82404254 | 82404091 | ID=MS.gene037523.t1.exon2;Parent=MS.gene037523.t1 |
| chr4.3 | CDS | 82404091 | 82404254 | 82404091 | ID=cds.MS.gene037523.t1;Parent=MS.gene037523.t1 |
| chr4.3 | exon | 82403343 | 82403993 | 82403343 | ID=MS.gene037523.t1.exon3;Parent=MS.gene037523.t1 |
| chr4.3 | CDS | 82403343 | 82403993 | 82403343 | ID=cds.MS.gene037523.t1;Parent=MS.gene037523.t1 |
| chr4.3 | exon | 82402957 | 82403074 | 82402957 | ID=MS.gene037523.t1.exon4;Parent=MS.gene037523.t1 |
| chr4.3 | CDS | 82402957 | 82403074 | 82402957 | ID=cds.MS.gene037523.t1;Parent=MS.gene037523.t1 |
| chr4.3 | exon | 82402619 | 82402807 | 82402619 | ID=MS.gene037523.t1.exon5;Parent=MS.gene037523.t1 |
| chr4.3 | CDS | 82402619 | 82402807 | 82402619 | ID=cds.MS.gene037523.t1;Parent=MS.gene037523.t1 |
| chr4.3 | exon | 82402287 | 82402457 | 82402287 | ID=MS.gene037523.t1.exon6;Parent=MS.gene037523.t1 |
| chr4.3 | CDS | 82402287 | 82402457 | 82402287 | ID=cds.MS.gene037523.t1;Parent=MS.gene037523.t1 |
| Gene Sequence |
| Protein sequence |
