Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037898.t1 | QCW63932.1 | 100 | 843 | 0 | 0 | 1 | 843 | 1 | 843 | 0.00E+00 | 1704.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037898.t1 | Q9ASR1 | 93.8 | 843 | 52 | 0 | 1 | 843 | 1 | 843 | 0.0e+00 | 1615.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037898.t1 | A0A4Y5P838 | 100.0 | 843 | 0 | 0 | 1 | 843 | 1 | 843 | 0.0e+00 | 1704.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene063366 | MS.gene037898 | PPI |
MS.gene060216 | MS.gene037898 | PPI |
MS.gene59979 | MS.gene037898 | PPI |
MS.gene066163 | MS.gene037898 | PPI |
MS.gene040581 | MS.gene037898 | PPI |
MS.gene037898 | MS.gene26537 | PPI |
MS.gene040156 | MS.gene037898 | PPI |
MS.gene058595 | MS.gene037898 | PPI |
MS.gene036653 | MS.gene037898 | PPI |
MS.gene037898 | MS.gene41890 | PPI |
MS.gene41888 | MS.gene037898 | PPI |
MS.gene037898 | MS.gene008760 | PPI |
MS.gene055714 | MS.gene037898 | PPI |
MS.gene037898 | MS.gene63721 | PPI |
MS.gene015588 | MS.gene037898 | PPI |
MS.gene58774 | MS.gene037898 | PPI |
MS.gene62623 | MS.gene037898 | PPI |
MS.gene068078 | MS.gene037898 | PPI |
MS.gene068080 | MS.gene037898 | PPI |
MS.gene041404 | MS.gene037898 | PPI |
MS.gene039110 | MS.gene037898 | PPI |
MS.gene037898 | MS.gene81858 | PPI |
MS.gene037898 | MS.gene39618 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037898.t1 | MTR_1g048000 | 98.814 | 843 | 10 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1744 |
MS.gene037898.t1 | MTR_2g069310 | 97.272 | 843 | 23 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1721 |
MS.gene037898.t1 | MTR_2g069050 | 97.272 | 843 | 23 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1720 |
MS.gene037898.t1 | MTR_2g069320 | 86.002 | 843 | 118 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1523 |
MS.gene037898.t1 | MTR_4g116430 | 39.141 | 838 | 473 | 10 | 20 | 834 | 140 | 963 | 0.0 | 622 |
MS.gene037898.t1 | MTR_4g119340 | 29.921 | 1016 | 490 | 26 | 16 | 829 | 11 | 1006 | 1.10e-135 | 429 |
MS.gene037898.t1 | MTR_7g009740 | 40.972 | 144 | 83 | 2 | 19 | 162 | 67 | 208 | 1.21e-23 | 107 |
MS.gene037898.t1 | MTR_3g097250 | 41.667 | 144 | 71 | 2 | 18 | 161 | 82 | 212 | 1.60e-22 | 103 |
MS.gene037898.t1 | MTR_1g052535 | 37.580 | 157 | 81 | 2 | 6 | 162 | 70 | 209 | 1.90e-21 | 99.0 |
MS.gene037898.t1 | MTR_1g052535 | 37.580 | 157 | 81 | 2 | 6 | 162 | 70 | 209 | 4.73e-21 | 99.0 |
MS.gene037898.t1 | MTR_4g079360 | 40.816 | 147 | 65 | 4 | 17 | 162 | 55 | 180 | 1.69e-20 | 97.4 |
MS.gene037898.t1 | MTR_4g101750 | 26.202 | 416 | 219 | 14 | 393 | 793 | 408 | 750 | 1.94e-20 | 97.4 |
MS.gene037898.t1 | MTR_4g101750 | 38.125 | 160 | 80 | 3 | 5 | 162 | 79 | 221 | 7.77e-17 | 85.9 |
MS.gene037898.t1 | MTR_3g101820 | 93.617 | 47 | 3 | 0 | 472 | 518 | 19 | 65 | 2.22e-20 | 86.7 |
MS.gene037898.t1 | MTR_7g044770 | 39.333 | 150 | 68 | 4 | 19 | 162 | 62 | 194 | 3.98e-17 | 86.7 |
MS.gene037898.t1 | MTR_4g101750 | 38.125 | 160 | 80 | 3 | 5 | 162 | 79 | 221 | 6.32e-17 | 85.9 |
MS.gene037898.t1 | MTR_4g101750 | 25.648 | 386 | 200 | 13 | 393 | 763 | 408 | 721 | 1.92e-16 | 84.3 |
MS.gene037898.t1 | MTR_2g020660 | 35.099 | 151 | 73 | 4 | 19 | 162 | 55 | 187 | 1.05e-13 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene037898.t1 | AT1G56070 | 93.832 | 843 | 52 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1666 |
MS.gene037898.t1 | AT1G56070 | 93.832 | 843 | 52 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1666 |
MS.gene037898.t1 | AT1G56070 | 93.832 | 843 | 52 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1666 |
MS.gene037898.t1 | AT3G12915 | 83.511 | 843 | 84 | 4 | 1 | 843 | 1 | 788 | 0.0 | 1444 |
MS.gene037898.t1 | AT1G06220 | 37.618 | 848 | 492 | 10 | 19 | 843 | 138 | 971 | 0.0 | 607 |
MS.gene037898.t1 | AT1G06220 | 37.618 | 848 | 492 | 10 | 19 | 843 | 138 | 971 | 0.0 | 607 |
MS.gene037898.t1 | AT1G06220 | 37.618 | 848 | 492 | 10 | 19 | 843 | 138 | 971 | 0.0 | 607 |
MS.gene037898.t1 | AT5G25230 | 37.190 | 847 | 497 | 8 | 19 | 843 | 124 | 957 | 0.0 | 599 |
MS.gene037898.t1 | AT5G25230 | 37.190 | 847 | 497 | 8 | 19 | 843 | 124 | 957 | 0.0 | 599 |
MS.gene037898.t1 | AT3G22980 | 30.396 | 1010 | 481 | 27 | 19 | 829 | 9 | 995 | 2.60e-139 | 439 |
MS.gene037898.t1 | AT3G22980 | 30.396 | 1010 | 481 | 27 | 19 | 829 | 9 | 995 | 2.60e-139 | 439 |
MS.gene037898.t1 | AT3G22980 | 30.396 | 1010 | 481 | 27 | 19 | 829 | 9 | 995 | 2.60e-139 | 439 |
MS.gene037898.t1 | AT5G13650 | 39.869 | 153 | 76 | 1 | 10 | 162 | 74 | 210 | 5.19e-24 | 108 |
MS.gene037898.t1 | AT5G13650 | 39.869 | 153 | 76 | 1 | 10 | 162 | 73 | 209 | 5.22e-24 | 108 |
MS.gene037898.t1 | AT5G39900 | 42.361 | 144 | 75 | 2 | 19 | 162 | 66 | 201 | 6.31e-24 | 108 |
MS.gene037898.t1 | AT1G62750 | 25.806 | 465 | 275 | 15 | 332 | 793 | 357 | 754 | 3.57e-21 | 99.8 |
MS.gene037898.t1 | AT1G62750 | 38.095 | 147 | 73 | 2 | 18 | 162 | 95 | 225 | 7.83e-16 | 82.4 |
MS.gene037898.t1 | AT5G08650 | 40.972 | 144 | 72 | 2 | 18 | 161 | 85 | 215 | 6.44e-21 | 98.6 |
MS.gene037898.t1 | AT5G08650 | 40.972 | 144 | 72 | 2 | 18 | 161 | 85 | 215 | 7.57e-21 | 98.6 |
MS.gene037898.t1 | AT2G31060 | 40.816 | 147 | 65 | 4 | 17 | 162 | 57 | 182 | 8.72e-21 | 98.2 |
MS.gene037898.t1 | AT2G31060 | 39.735 | 151 | 65 | 5 | 17 | 162 | 57 | 186 | 5.62e-19 | 92.4 |
MS.gene037898.t1 | AT1G45332 | 23.701 | 481 | 263 | 18 | 332 | 793 | 328 | 723 | 6.51e-18 | 89.4 |
MS.gene037898.t1 | AT1G45332 | 37.333 | 150 | 71 | 4 | 19 | 162 | 65 | 197 | 2.95e-16 | 84.0 |
MS.gene037898.t1 | AT1G45332 | 23.701 | 481 | 263 | 18 | 332 | 793 | 148 | 543 | 7.27e-18 | 88.6 |
MS.gene037898.t1 | AT2G45030 | 23.701 | 481 | 263 | 18 | 332 | 793 | 328 | 723 | 7.67e-18 | 89.0 |
MS.gene037898.t1 | AT2G45030 | 37.333 | 150 | 71 | 4 | 19 | 162 | 65 | 197 | 3.22e-16 | 84.0 |
Find 262 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTCCAGGGACAAAATT+TGG | 0.202718 | 1.1:+31326528 | None:intergenic |
AGGTTTGAAGGTCAGAATTA+TGG | 0.233507 | 1.1:-31326553 | MS.gene037898:CDS |
CCCAGTGTGTCTTTGATCAT+TGG | 0.233983 | 1.1:-31325384 | MS.gene037898:CDS |
AAAATGTATGCCTCAAAATT+TGG | 0.234564 | 1.1:-31327089 | MS.gene037898:CDS |
AGGATCTTGCCAAGAAAATT+TGG | 0.236195 | 1.1:-31325885 | MS.gene037898:CDS |
CACTGTTGCTTTGGTTGGTT+TGG | 0.249758 | 1.1:-31326418 | MS.gene037898:CDS |
GCCAAGAAAATTTGGTGTTT+TGG | 0.256520 | 1.1:-31325877 | MS.gene037898:CDS |
CTGACCCTGTTGTGTCATTC+AGG | 0.257068 | 1.1:-31326095 | MS.gene037898:CDS |
CTCCCTGTCATTGAGTCCTT+TGG | 0.264856 | 1.1:-31325451 | MS.gene037898:CDS |
GTTTGTACTATTGAGGAGTC+TGG | 0.274916 | 1.1:-31326213 | MS.gene037898:CDS |
GTGTCCAGAGAACTGTTATT+TGG | 0.279555 | 1.1:-31326485 | MS.gene037898:CDS |
TTCTGCTGGTTTGCATGGTT+GGG | 0.288108 | 1.1:-31327135 | MS.gene037898:CDS |
ATGTTGGGCCCGGTGGTCTC+AGG | 0.291091 | 1.1:+31325853 | None:intergenic |
CACAGCCAAACCCAGGCTTC+TGG | 0.302051 | 1.1:-31325611 | MS.gene037898:CDS |
TTTCTGCTGGTTTGCATGGT+TGG | 0.318008 | 1.1:-31327136 | MS.gene037898:CDS |
CAAGATCTTAGAACGATTCT+TGG | 0.325192 | 1.1:+31325930 | None:intergenic |
TGAGAATGCTAATGTGATTA+TGG | 0.328876 | 1.1:-31327222 | MS.gene037898:CDS |
CAAACCTGTGGAAACCTTAC+CGG | 0.346294 | 1.1:+31326569 | None:intergenic |
GGACATCACCTGCAACTTCC+TGG | 0.349353 | 1.1:+31327627 | None:intergenic |
AAAGCAACTGTTCCTTTCTC+TGG | 0.351057 | 1.1:+31327158 | None:intergenic |
CAGTTGAGAGCTGCAACATC+TGG | 0.351506 | 1.1:-31325418 | MS.gene037898:CDS |
GTCCTTCTCATCAGACTTCA+TGG | 0.358364 | 1.1:+31326857 | None:intergenic |
TGATGAGTTACGTCGTATTA+TGG | 0.359602 | 1.1:-31328373 | MS.gene037898:CDS |
GATCTGTTTGAAAGATTTGC+AGG | 0.360046 | 1.1:-31326151 | MS.gene037898:CDS |
CAGGTGCTTCCTTGAGCTCC+AGG | 0.361865 | 1.1:-31327285 | MS.gene037898:CDS |
TGAACAGCAACACGCACAAC+AGG | 0.361874 | 1.1:+31326309 | None:intergenic |
GGTTTGAAGGTCAGAATTAT+GGG | 0.372517 | 1.1:-31326552 | MS.gene037898:CDS |
TCTAGTAGGGCAGTACTTGC+TGG | 0.374826 | 1.1:+31326789 | None:intergenic |
TTCCTTGAGCTCCAGGTTGA+TGG | 0.376003 | 1.1:-31327278 | MS.gene037898:CDS |
CACCATGACCTCAGATCCTT+TGG | 0.379275 | 1.1:-31325359 | MS.gene037898:CDS |
CCAGTGTGTCTTTGATCATT+GGG | 0.381895 | 1.1:-31325383 | MS.gene037898:CDS |
CGAAGCTGAACCAGTATTCT+TGG | 0.382723 | 1.1:+31326992 | None:intergenic |
GTCCTTCAGGATCACAGTTT+CGG | 0.383346 | 1.1:+31326667 | None:intergenic |
TCATCAATGGCTTACCCATC+AGG | 0.390366 | 1.1:+31326835 | None:intergenic |
CCAAGATGATGGAGAGGCTC+TGG | 0.394619 | 1.1:-31327055 | MS.gene037898:CDS |
GATCTTCCCAAGCTTGTTGA+AGG | 0.394760 | 1.1:-31326270 | MS.gene037898:CDS |
ATGATTCCAGCATCTGATAA+AGG | 0.394970 | 1.1:-31326621 | MS.gene037898:CDS |
GCTTCTGGAGCCTGTTTACA+TGG | 0.395432 | 1.1:-31325596 | MS.gene037898:CDS |
AATTCTCAACACGGTACCTC+TGG | 0.395681 | 1.1:+31326730 | None:intergenic |
ATCAAGGATTCCGTGGTTGC+TGG | 0.395800 | 1.1:-31325790 | MS.gene037898:CDS |
TCCACTTCTTGGTGATGTTA+TGG | 0.395915 | 1.1:-31327186 | MS.gene037898:CDS |
TAAAGCATCAGAGGTCCTTC+AGG | 0.397098 | 1.1:+31326654 | None:intergenic |
TGGATTTCCACCATGTAAAC+AGG | 0.399272 | 1.1:+31325586 | None:intergenic |
ATTATTGCCCAGGAAGTTGC+AGG | 0.399303 | 1.1:-31327635 | MS.gene037898:CDS |
AAGATCTTGTCCGAACAGTA+TGG | 0.399948 | 1.1:-31325916 | MS.gene037898:CDS |
GAAAGATCATCATTTCTAGT+AGG | 0.402914 | 1.1:+31326775 | None:intergenic |
TGGCCGTGTGTTTGCCGGTA+AGG | 0.405219 | 1.1:-31326583 | MS.gene037898:CDS |
ACATATGAAGATCCACTTCT+TGG | 0.405824 | 1.1:-31327197 | MS.gene037898:CDS |
GTACAGCCGGTTGTGCTTGT+TGG | 0.411197 | 1.1:+31326026 | None:intergenic |
TTGTGGTAACACTGTTGCTT+TGG | 0.416139 | 1.1:-31326427 | MS.gene037898:CDS |
TGCATAACACGTTTCATCAA+TGG | 0.416590 | 1.1:+31326822 | None:intergenic |
CAAGAGCTTGCTCAGGAGCT+TGG | 0.418120 | 1.1:+31325566 | None:intergenic |
TGTTGAAGGTCTCAAACGTT+TGG | 0.418443 | 1.1:-31326256 | MS.gene037898:CDS |
TCAGTATTTGAATGAAATCA+AGG | 0.419099 | 1.1:-31325806 | MS.gene037898:CDS |
TCCTATTGTGCCCTCATCAA+TGG | 0.419375 | 1.1:+31325966 | None:intergenic |
GTCGCAGCACAGTTTCAGTT+TGG | 0.422669 | 1.1:+31327357 | None:intergenic |
AAATGGACCACCAAGAATAC+TGG | 0.423352 | 1.1:-31327002 | MS.gene037898:CDS |
AGGCTCCAGAAGCCTGGGTT+TGG | 0.428478 | 1.1:+31325606 | None:intergenic |
AACCTTCCTTTATCAGATGC+TGG | 0.429298 | 1.1:+31326615 | None:intergenic |
TATGGTTGTTTGTACTATTG+AGG | 0.430770 | 1.1:-31326220 | MS.gene037898:CDS |
GCCATTGATGAGGGCACAAT+AGG | 0.431150 | 1.1:-31325967 | MS.gene037898:CDS |
CACATATCAACCACCATGTT+GGG | 0.432084 | 1.1:+31325838 | None:intergenic |
ACAAGCTGCACAGCTTGTTA+TGG | 0.432329 | 1.1:-31325326 | MS.gene037898:CDS |
CCATCCAAATAACAGTTCTC+TGG | 0.434711 | 1.1:+31326481 | None:intergenic |
GATGTTGTAAAGTGGGGTAC+CGG | 0.435287 | 1.1:+31325483 | None:intergenic |
CAATTACCCTTGAAAAGGTC+TGG | 0.435410 | 1.1:+31327243 | None:intergenic |
CCGTGTTGAGAATTTGTATG+AGG | 0.437541 | 1.1:-31326721 | MS.gene037898:CDS |
ACTGTGCTGCGACAAGCTCT+TGG | 0.438603 | 1.1:-31327347 | MS.gene037898:CDS |
AGATTTGCAGGATGATTTCA+TGG | 0.438730 | 1.1:-31326139 | MS.gene037898:CDS |
AAGCTCTTGGAGAAAGGATT+AGG | 0.440249 | 1.1:-31327334 | MS.gene037898:CDS |
TACAGATCTTTCTTCTCTCC+AGG | 0.440377 | 1.1:+31326516 | None:intergenic |
ACCTCAGATCCTTTGGAGGC+TGG | 0.443218 | 1.1:-31325352 | MS.gene037898:CDS |
GTCTCCCTGAATGACACAAC+AGG | 0.444642 | 1.1:+31326090 | None:intergenic |
TGGCCCATGCTCACAAAGCT+AGG | 0.445722 | 1.1:-31326885 | MS.gene037898:CDS |
GTAAACAGGCTCCAGAAGCC+TGG | 0.449558 | 1.1:+31325600 | None:intergenic |
ATTAATCTCATTGATTCCCC+TGG | 0.450134 | 1.1:-31327470 | MS.gene037898:CDS |
CCTTGAGTCCCTTCCTCTTG+CGG | 0.451681 | 1.1:+31325299 | None:intergenic |
CCAGAGCCTCTCCATCATCT+TGG | 0.458486 | 1.1:+31327055 | None:intergenic |
TTTGAGACCTTCAACAAGCT+TGG | 0.459038 | 1.1:+31326263 | None:intergenic |
TAAGGTTTCCACAGGTTTGA+AGG | 0.460784 | 1.1:-31326565 | MS.gene037898:CDS |
TGAATCTCTCAAGAGGTTCA+AGG | 0.462319 | 1.1:-31327519 | MS.gene037898:CDS |
AATCACCCAACAAGCACAAC+CGG | 0.462761 | 1.1:-31326032 | MS.gene037898:CDS |
TTGAGACCTTCAACAAGCTT+GGG | 0.463364 | 1.1:+31326264 | None:intergenic |
ATTCTCAATTACCCTTGAAA+AGG | 0.463532 | 1.1:+31327238 | None:intergenic |
TACAGCCGGTTGTGCTTGTT+GGG | 0.463966 | 1.1:+31326027 | None:intergenic |
GATGAGAAGTCGACGTGCCC+AGG | 0.465265 | 1.1:+31327452 | None:intergenic |
GTGTTGATGATCTGCTTGAT+AGG | 0.466476 | 1.1:+31326936 | None:intergenic |
TCTGGGGAACACATTGTTGC+TGG | 0.466745 | 1.1:-31326195 | MS.gene037898:CDS |
GACCCCTAGCTTTGTGAGCA+TGG | 0.466896 | 1.1:+31326881 | None:intergenic |
TTTGTACTATTGAGGAGTCT+GGG | 0.468088 | 1.1:-31326212 | MS.gene037898:CDS |
ATCTTATTAACTGTAAGAAC+AGG | 0.471492 | 1.1:+31327311 | None:intergenic |
GCTTGTCTTCAAACTCAGAA+AGG | 0.471632 | 1.1:+31325263 | None:intergenic |
CTTGTCTTCAAACTCAGAAA+GGG | 0.475137 | 1.1:+31325264 | None:intergenic |
CAAGCTCCTGAGCAAGCTCT+TGG | 0.480687 | 1.1:-31325565 | MS.gene037898:CDS |
ACCCCTAGCTTTGTGAGCAT+GGG | 0.481514 | 1.1:+31326882 | None:intergenic |
CCAGAGAACTGTTATTTGGA+TGG | 0.484696 | 1.1:-31326481 | MS.gene037898:CDS |
CTCCATCAACCTGGAGCTCA+AGG | 0.484716 | 1.1:+31327276 | None:intergenic |
AAGATCTTAGAACGATTCTT+GGG | 0.487332 | 1.1:+31325931 | None:intergenic |
GGTAACACTGTTGCTTTGGT+TGG | 0.489497 | 1.1:-31326423 | MS.gene037898:CDS |
CAAGCACAACCGGCTGTACA+TGG | 0.494305 | 1.1:-31326022 | MS.gene037898:CDS |
TGTTCTTACAGTTAATAAGA+TGG | 0.496370 | 1.1:-31327309 | MS.gene037898:CDS |
TTTGGCTAAGTCAGATCCTA+TGG | 0.497431 | 1.1:-31326238 | MS.gene037898:CDS |
CAAGATGATGGAGAGGCTCT+GGG | 0.500748 | 1.1:-31327054 | MS.gene037898:CDS |
CGATTCTTGGGATCATCCCT+TGG | 0.503147 | 1.1:+31325943 | None:intergenic |
TATTTGGATGGGAAAGAGAC+AGG | 0.503305 | 1.1:-31326469 | MS.gene037898:CDS |
GACTCTCTAGTCGCTGCTGC+GGG | 0.503640 | 1.1:-31327659 | MS.gene037898:CDS |
AATCCAAAGGACTCAATGAC+AGG | 0.504729 | 1.1:+31325448 | None:intergenic |
CATGGTGGTTGATATGTGTA+AGG | 0.508997 | 1.1:-31325833 | MS.gene037898:CDS |
CAGAGAACTGTTATTTGGAT+GGG | 0.509130 | 1.1:-31326480 | MS.gene037898:CDS |
ATCAACCACCATGTTGGGCC+CGG | 0.509336 | 1.1:+31325843 | None:intergenic |
GGCAGTACTTGCTGGCAACC+AGG | 0.509546 | 1.1:+31326797 | None:intergenic |
GACATCACCTGCAACTTCCT+GGG | 0.511795 | 1.1:+31327628 | None:intergenic |
GAGAGCTGCAACATCTGGGC+AGG | 0.512622 | 1.1:-31325413 | MS.gene037898:CDS |
CGTTGACGAGTCCAAGATGA+TGG | 0.513608 | 1.1:-31327066 | MS.gene037898:CDS |
TGTGGATAGCATCAGTGTGC+AGG | 0.514904 | 1.1:+31325689 | None:intergenic |
GGTTCAGCTTCGTGCAAGCG+TGG | 0.519811 | 1.1:-31326981 | MS.gene037898:CDS |
CTTGTCCGAACAGTATGGTT+GGG | 0.522890 | 1.1:-31325911 | MS.gene037898:CDS |
TGCGACAAGCTCTTGGAGAA+AGG | 0.523403 | 1.1:-31327340 | MS.gene037898:CDS |
TGACCCTGTTGTGTCATTCA+GGG | 0.524905 | 1.1:-31326094 | MS.gene037898:CDS |
CAAGTGCTCCATCAGTAATA+CGG | 0.527408 | 1.1:+31327411 | None:intergenic |
CATGACCTCAGATCCTTTGG+AGG | 0.527781 | 1.1:-31325356 | MS.gene037898:CDS |
AAAGATCATCATTTCTAGTA+GGG | 0.528380 | 1.1:+31326776 | None:intergenic |
GTCTTGCTTCCATGTACAGC+CGG | 0.529578 | 1.1:+31326013 | None:intergenic |
TTACAGTTAATAAGATGGAC+AGG | 0.531864 | 1.1:-31327304 | MS.gene037898:CDS |
AAAACTTCATAGCTCGGATA+GGG | 0.533180 | 1.1:+31326340 | None:intergenic |
TTTGCCGGTAAGGTTTCCAC+AGG | 0.533577 | 1.1:-31326573 | MS.gene037898:CDS |
GCGTGTTGCTGTTCAGTGCA+AGG | 0.535855 | 1.1:-31326301 | MS.gene037898:CDS |
TGTTGGGCCCGGTGGTCTCA+GGG | 0.536122 | 1.1:+31325854 | None:intergenic |
GAATCTCTCAAGAGGTTCAA+GGG | 0.536243 | 1.1:-31327518 | MS.gene037898:CDS |
CTTGTCCCAACCATACTGTT+CGG | 0.536466 | 1.1:+31325906 | None:intergenic |
ATGCTTTGATGTTGTAAAGT+GGG | 0.537284 | 1.1:+31325476 | None:intergenic |
GGCCCATGCTCACAAAGCTA+GGG | 0.537808 | 1.1:-31326884 | MS.gene037898:CDS |
CGGTACCTCTGGGCAGTATG+TGG | 0.538154 | 1.1:+31326741 | None:intergenic |
TTCCAGTGGGCATCAAAAGA+AGG | 0.538881 | 1.1:-31325766 | MS.gene037898:CDS |
CACCATGAAGTCTGATGAGA+AGG | 0.539451 | 1.1:-31326859 | MS.gene037898:CDS |
GTTCAGCTTCGTGCAAGCGT+GGG | 0.540952 | 1.1:-31326980 | MS.gene037898:CDS |
TATGCTTTGATGTTGTAAAG+TGG | 0.540958 | 1.1:+31325475 | None:intergenic |
TTCATAGTAGAGTGAGATAC+CGG | 0.541444 | 1.1:+31327550 | None:intergenic |
CTCCAAAGGATCTGAGGTCA+TGG | 0.541737 | 1.1:+31325357 | None:intergenic |
GAACAGCAACACGCACAACA+GGG | 0.544909 | 1.1:+31326310 | None:intergenic |
GATGCTATCCACAGAGGAGG+TGG | 0.545132 | 1.1:-31325679 | MS.gene037898:CDS |
ACACATATCAACCACCATGT+TGG | 0.545736 | 1.1:+31325837 | None:intergenic |
ATGTTGTAAAGTGGGGTACC+GGG | 0.548869 | 1.1:+31325484 | None:intergenic |
GCTCCTGAGCAAGCTCTTGG+TGG | 0.549556 | 1.1:-31325562 | MS.gene037898:CDS |
AACACGCACAACAGGGGAGA+CGG | 0.549875 | 1.1:+31326317 | None:intergenic |
ATGCCTCCTCTCCATCAACC+TGG | 0.550361 | 1.1:+31327267 | None:intergenic |
CATGGAAGCAAGACCATTGG+AGG | 0.550888 | 1.1:-31326004 | MS.gene037898:CDS |
TCTGCAAGTCCATCCTCCAA+TGG | 0.551260 | 1.1:+31325991 | None:intergenic |
CCCAATGATCAAAGACACAC+TGG | 0.551429 | 1.1:+31325383 | None:intergenic |
CGACTCTCTAGTCGCTGCTG+CGG | 0.551465 | 1.1:-31327660 | MS.gene037898:CDS |
CCGTGGTTGCTGGATTCCAG+TGG | 0.552245 | 1.1:-31325780 | MS.gene037898:CDS |
GAAAACTTCATAGCTCGGAT+AGG | 0.554600 | 1.1:+31326339 | None:intergenic |
ATTTGCATATTGATCGTCAA+GGG | 0.554630 | 1.1:+31326695 | None:intergenic |
GTTATGGTGTATCCAGAGAA+AGG | 0.556062 | 1.1:-31327170 | MS.gene037898:CDS |
ACTTCATAGCTCGGATAGGG+TGG | 0.557461 | 1.1:+31326343 | None:intergenic |
ATGAGAAGTCGACGTGCCCA+GGG | 0.558070 | 1.1:+31327453 | None:intergenic |
TTAATCTCATTGATTCCCCT+GGG | 0.559398 | 1.1:-31327469 | MS.gene037898:CDS |
CTCTGGGCAGTATGTGGTGA+GGG | 0.561287 | 1.1:+31326747 | None:intergenic |
TTTGAAGAAATGCAGAGGCC+CGG | 0.562287 | 1.1:-31325502 | MS.gene037898:CDS |
TATGGACATCCGCAAGAGGA+AGG | 0.562365 | 1.1:-31325308 | MS.gene037898:CDS |
CACGCTCAGCTTCATCAGCA+CGG | 0.562494 | 1.1:+31327591 | None:intergenic |
ACCATAACATCACCAAGAAG+TGG | 0.563046 | 1.1:+31327185 | None:intergenic |
TAAACAGGCTCCAGAAGCCT+GGG | 0.563138 | 1.1:+31325601 | None:intergenic |
CACAGCTCACAGCCAAACCC+AGG | 0.564223 | 1.1:-31325618 | MS.gene037898:CDS |
GTCTGATGAGAAGGACCTGA+TGG | 0.565161 | 1.1:-31326850 | MS.gene037898:CDS |
TCTTGTCCGAACAGTATGGT+TGG | 0.569952 | 1.1:-31325912 | MS.gene037898:CDS |
AGACGGAAAACTTCATAGCT+CGG | 0.571073 | 1.1:+31326334 | None:intergenic |
CACTTGTATGAATGATCAGA+AGG | 0.573672 | 1.1:-31326916 | MS.gene037898:CDS |
TCAATAGTACAAACAACCAT+AGG | 0.573953 | 1.1:+31326222 | None:intergenic |
CCGCAAGAGGAAGGGACTCA+AGG | 0.574628 | 1.1:-31325299 | MS.gene037898:CDS |
CGTGGTTGCTGGATTCCAGT+GGG | 0.577990 | 1.1:-31325779 | MS.gene037898:CDS |
TATTACTGATGGAGCACTTG+TGG | 0.579807 | 1.1:-31327408 | MS.gene037898:CDS |
AGTTGAGAGCTGCAACATCT+GGG | 0.580420 | 1.1:-31325417 | MS.gene037898:CDS |
GGTATTACAATCAAGTCTAC+CGG | 0.580486 | 1.1:-31327569 | MS.gene037898:CDS |
ATACCACCAAGAGCTTGCTC+AGG | 0.582185 | 1.1:+31325559 | None:intergenic |
TGCTGCGGGAATTATTGCCC+AGG | 0.583228 | 1.1:-31327645 | MS.gene037898:CDS |
GAATGAAATCAAGGATTCCG+TGG | 0.583756 | 1.1:-31325797 | MS.gene037898:CDS |
TGCTACATTGACAAATGAGA+AGG | 0.584546 | 1.1:-31326376 | MS.gene037898:CDS |
GCTGCACTCCGTATTACTGA+TGG | 0.586477 | 1.1:-31327419 | MS.gene037898:CDS |
GAACACATTGTTGCTGGTGC+AGG | 0.586596 | 1.1:-31326189 | MS.gene037898:CDS |
ACGCTCAGCTTCATCAGCAC+GGG | 0.587287 | 1.1:+31327592 | None:intergenic |
TGACTGATGAATCTCTCAAG+AGG | 0.587306 | 1.1:-31327526 | MS.gene037898:CDS |
GTACATGGAAGCAAGACCAT+TGG | 0.587944 | 1.1:-31326007 | MS.gene037898:CDS |
ATTCTCAACACGGTACCTCT+GGG | 0.589098 | 1.1:+31326731 | None:intergenic |
ATGGACATCCGCAAGAGGAA+GGG | 0.589685 | 1.1:-31325307 | MS.gene037898:CDS |
GTGGTAGTTGACTGTGTGGA+AGG | 0.592397 | 1.1:-31327389 | MS.gene037898:CDS |
AAACCTTACCGGCAAACACA+CGG | 0.592803 | 1.1:+31326580 | None:intergenic |
TTCCAGCATCTGATAAAGGA+AGG | 0.593214 | 1.1:-31326617 | MS.gene037898:CDS |
CGAACAGTATGGTTGGGACA+AGG | 0.595072 | 1.1:-31325905 | MS.gene037898:CDS |
CTTGCAGAGGCCATTGATGA+GGG | 0.595208 | 1.1:-31325976 | MS.gene037898:CDS |
CATTTGCATATTGATCGTCA+AGG | 0.595538 | 1.1:+31326694 | None:intergenic |
CCAATGATCAAAGACACACT+GGG | 0.598032 | 1.1:+31325384 | None:intergenic |
GATCATTCCTACTGCTAGGA+GGG | 0.598674 | 1.1:-31325653 | MS.gene037898:CDS |
ACTTGCAGAGGCCATTGATG+AGG | 0.601617 | 1.1:-31325977 | MS.gene037898:CDS |
CAGCACGGGTGTCAGTCATA+CGG | 0.601634 | 1.1:+31327606 | None:intergenic |
TGAGCTCCAGGTTGATGGAG+AGG | 0.602836 | 1.1:-31327273 | MS.gene037898:CDS |
AGATCATTCCTACTGCTAGG+AGG | 0.604531 | 1.1:-31325654 | MS.gene037898:CDS |
GAAGCAAGACCATTGGAGGA+TGG | 0.605318 | 1.1:-31326000 | MS.gene037898:CDS |
AATTCTGACCTTCAAACCTG+TGG | 0.606212 | 1.1:+31326557 | None:intergenic |
GCTTGTGATCCAGCCTCCAA+AGG | 0.607119 | 1.1:+31325343 | None:intergenic |
CGTGTTGAGAATTTGTATGA+GGG | 0.607857 | 1.1:-31326720 | MS.gene037898:CDS |
TAGAAGACCCTCCTAGCAGT+AGG | 0.610227 | 1.1:+31325646 | None:intergenic |
GATTTGCAGGATGATTTCAT+GGG | 0.610409 | 1.1:-31326138 | MS.gene037898:CDS |
TCTGATGAGAAGGACCTGAT+GGG | 0.610458 | 1.1:-31326849 | MS.gene037898:CDS |
TTGTACTATTGAGGAGTCTG+GGG | 0.612431 | 1.1:-31326211 | MS.gene037898:CDS |
TGAGACCACCGGGCCCAACA+TGG | 0.612498 | 1.1:-31325851 | MS.gene037898:CDS |
TGCTTTGATGTTGTAAAGTG+GGG | 0.620305 | 1.1:+31325477 | None:intergenic |
TTGCAGGATGATTTCATGGG+TGG | 0.623664 | 1.1:-31326135 | MS.gene037898:CDS |
ACAGATCTTTCTTCTCTCCA+GGG | 0.623667 | 1.1:+31326517 | None:intergenic |
AGCTGAACCAGTATTCTTGG+TGG | 0.623967 | 1.1:+31326995 | None:intergenic |
TTGTCTTCAAACTCAGAAAG+GGG | 0.624318 | 1.1:+31325265 | None:intergenic |
CTTCATAGCTCGGATAGGGT+GGG | 0.626126 | 1.1:+31326344 | None:intergenic |
AACCACCATGTTGGGCCCGG+TGG | 0.628249 | 1.1:+31325846 | None:intergenic |
TTTGACACATAAAGCATCAG+AGG | 0.628659 | 1.1:+31326645 | None:intergenic |
AAAGAGACAGGAGACTGTTG+AGG | 0.631254 | 1.1:-31326457 | MS.gene037898:CDS |
GGGTTTGGCTGTGAGCTGTG+AGG | 0.632899 | 1.1:+31325621 | None:intergenic |
ACGAGTCCAAGATGATGGAG+AGG | 0.633430 | 1.1:-31327061 | MS.gene037898:CDS |
TCCAGCCTCCAAAGGATCTG+AGG | 0.633775 | 1.1:+31325351 | None:intergenic |
CCACTGGAATCCAGCAACCA+CGG | 0.634741 | 1.1:+31325780 | None:intergenic |
GTCAGATCATTCCTACTGCT+AGG | 0.635280 | 1.1:-31325657 | MS.gene037898:CDS |
TGAAACGTGTTATGCAAACC+TGG | 0.637256 | 1.1:-31326815 | MS.gene037898:CDS |
CGCAGCAGCGACTAGAGAGT+CGG | 0.639168 | 1.1:+31327661 | None:intergenic |
ATCCGAAACTGTGATCCTGA+AGG | 0.640545 | 1.1:-31326669 | MS.gene037898:CDS |
CCTCTGGGCAGTATGTGGTG+AGG | 0.643172 | 1.1:+31326746 | None:intergenic |
GTCATTGCTCATGTTGACCA+CGG | 0.643542 | 1.1:-31328321 | MS.gene037898:intron |
TGATCTGACCACCTCCTCTG+TGG | 0.643725 | 1.1:+31325671 | None:intergenic |
TTGTCGGAAGAAAACATGAG+AGG | 0.644061 | 1.1:-31325739 | MS.gene037898:CDS |
AATCTCTCAAGAGGTTCAAG+GGG | 0.649198 | 1.1:-31327517 | MS.gene037898:CDS |
ATGAGGGCACAATAGGACCA+AGG | 0.652106 | 1.1:-31325960 | MS.gene037898:CDS |
GCTCCAGGTTGATGGAGAGG+AGG | 0.655928 | 1.1:-31327270 | MS.gene037898:CDS |
TTGTTATGGACATCCGCAAG+AGG | 0.656029 | 1.1:-31325312 | MS.gene037898:CDS |
ATTGGAGGATGGACTTGCAG+AGG | 0.656657 | 1.1:-31325989 | MS.gene037898:CDS |
GCACGTCGACTTCTCATCTG+AGG | 0.657062 | 1.1:-31327447 | MS.gene037898:CDS |
TGAGGGCACAATAGGACCAA+GGG | 0.659043 | 1.1:-31325959 | MS.gene037898:CDS |
TTTGCATATTGATCGTCAAG+GGG | 0.659239 | 1.1:+31326696 | None:intergenic |
TCTGGAGCCTGTTTACATGG+TGG | 0.659247 | 1.1:-31325593 | MS.gene037898:CDS |
GTGATTTACTCATCACTGTG+CGG | 0.663418 | 1.1:+31326049 | None:intergenic |
ATCCAAAGGACTCAATGACA+GGG | 0.671225 | 1.1:+31325449 | None:intergenic |
CCTCATACAAATTCTCAACA+CGG | 0.672730 | 1.1:+31326721 | None:intergenic |
GACCACCGGGCCCAACATGG+TGG | 0.678120 | 1.1:-31325848 | MS.gene037898:CDS |
ATGATCAGAAGGATAAGTTG+TGG | 0.678564 | 1.1:-31326905 | MS.gene037898:CDS |
AACAGCAACACGCACAACAG+GGG | 0.681174 | 1.1:+31326311 | None:intergenic |
GTGTTCTGAATCAGAAACGT+GGG | 0.682918 | 1.1:-31325531 | MS.gene037898:CDS |
CAACTGACTAGAAAATCCAA+AGG | 0.684599 | 1.1:+31325435 | None:intergenic |
GCCCATGCTCACAAAGCTAG+GGG | 0.687210 | 1.1:-31326883 | MS.gene037898:CDS |
TTGCATATTGATCGTCAAGG+GGG | 0.688894 | 1.1:+31326697 | None:intergenic |
ACTGATGCTATCCACAGAGG+AGG | 0.690896 | 1.1:-31325682 | MS.gene037898:CDS |
AAGATGATGGAGAGGCTCTG+GGG | 0.692051 | 1.1:-31327053 | MS.gene037898:CDS |
AGTGTTCTGAATCAGAAACG+TGG | 0.702524 | 1.1:-31325532 | MS.gene037898:CDS |
ATGGTGGTTGATATGTGTAA+GGG | 0.703374 | 1.1:-31325832 | MS.gene037898:CDS |
TCTCCCTGAATGACACAACA+GGG | 0.710578 | 1.1:+31326091 | None:intergenic |
CGTGCTGATGAAGCTGAGCG+TGG | 0.710870 | 1.1:-31327590 | MS.gene037898:CDS |
AAAGCAACAGTGTTACCACA+AGG | 0.719194 | 1.1:+31326429 | None:intergenic |
CAAAGGACTCAATGACAGGG+AGG | 0.725112 | 1.1:+31325452 | None:intergenic |
CAATGATCAAAGACACACTG+GGG | 0.733022 | 1.1:+31325385 | None:intergenic |
AATGATCAAAGACACACTGG+GGG | 0.734815 | 1.1:+31325386 | None:intergenic |
TGAGAAGTCGACGTGCCCAG+GGG | 0.741729 | 1.1:+31327454 | None:intergenic |
ACTTGTGGTAGTTGACTGTG+TGG | 0.751182 | 1.1:-31327393 | MS.gene037898:CDS |
ATCTCTCAAGAGGTTCAAGG+GGG | 0.752307 | 1.1:-31327516 | MS.gene037898:CDS |
CACACTGATGCTATCCACAG+AGG | 0.760707 | 1.1:-31325685 | MS.gene037898:CDS |
CCTCACCACATACTGCCCAG+AGG | 0.760799 | 1.1:-31326746 | MS.gene037898:CDS |
ACTGTTGAGGATGTGCCTTG+TGG | 0.764160 | 1.1:-31326444 | MS.gene037898:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTTCTAAATTTGATTAT+AGG | - | chr1.1:31325705-31325724 | MS.gene037898:CDS | 10.0% |
!! | TAAAACCAATTATAATAAAA+TGG | - | chr1.1:31325620-31325639 | MS.gene037898:CDS | 10.0% |
!!! | ATTATAAGAAAAAATGATTT+TGG | - | chr1.1:31325506-31325525 | MS.gene037898:CDS | 10.0% |
!!! | TTATAATTGGTTTTATATAA+AGG | + | chr1.1:31325615-31325634 | None:intergenic | 10.0% |
!! | TTAGTACTTAAAAAATCATG+CGG | + | chr1.1:31325885-31325904 | None:intergenic | 20.0% |
!!! | GCAATCCATTTTATTATAAT+TGG | + | chr1.1:31325628-31325647 | None:intergenic | 20.0% |
! | AAAATGTATGCCTCAAAATT+TGG | - | chr1.1:31326652-31326671 | MS.gene037898:CDS | 25.0% |
! | AAAGAAAAAATTGTTCAGAC+CGG | + | chr1.1:31326031-31326050 | None:intergenic | 25.0% |
! | ATCTTATTAACTGTAAGAAC+AGG | + | chr1.1:31326433-31326452 | None:intergenic | 25.0% |
! | GTATATGTACTATAGTTTAC+CGG | - | chr1.1:31326009-31326028 | MS.gene037898:CDS | 25.0% |
! | TCAGTATTTGAATGAAATCA+AGG | - | chr1.1:31327935-31327954 | MS.gene037898:intron | 25.0% |
! | TGTTCTTACAGTTAATAAGA+TGG | - | chr1.1:31326432-31326451 | MS.gene037898:CDS | 25.0% |
!! | TTTTTCCACAAAAAATCTGT+AGG | - | chr1.1:31325741-31325760 | MS.gene037898:CDS | 25.0% |
!!! | AAAGATCATCATTTCTAGTA+GGG | + | chr1.1:31326968-31326987 | None:intergenic | 25.0% |
!!! | TTTTCTTTGTTTCTATATGC+AGG | - | chr1.1:31326043-31326062 | MS.gene037898:CDS | 25.0% |
AAGATCTTAGAACGATTCTT+GGG | + | chr1.1:31327813-31327832 | None:intergenic | 30.0% | |
ACAAAAAATCTGTAGGAAAC+AGG | - | chr1.1:31325748-31325767 | MS.gene037898:CDS | 30.0% | |
ATGCTTTGATGTTGTAAAGT+GGG | + | chr1.1:31328268-31328287 | None:intergenic | 30.0% | |
ATTCTCAATTACCCTTGAAA+AGG | + | chr1.1:31326506-31326525 | None:intergenic | 30.0% | |
ATTTGCATATTGATCGTCAA+GGG | + | chr1.1:31327049-31327068 | None:intergenic | 30.0% | |
TATGCTTTGATGTTGTAAAG+TGG | + | chr1.1:31328269-31328288 | None:intergenic | 30.0% | |
TATGGTTGTTTGTACTATTG+AGG | - | chr1.1:31327521-31327540 | MS.gene037898:CDS | 30.0% | |
TCAATAGTACAAACAACCAT+AGG | + | chr1.1:31327522-31327541 | None:intergenic | 30.0% | |
TGAGAATGCTAATGTGATTA+TGG | - | chr1.1:31326519-31326538 | MS.gene037898:CDS | 30.0% | |
TTACAGTTAATAAGATGGAC+AGG | - | chr1.1:31326437-31326456 | MS.gene037898:CDS | 30.0% | |
!! | GAAAGATCATCATTTCTAGT+AGG | + | chr1.1:31326969-31326988 | None:intergenic | 30.0% |
!!! | AAAGGAAGGTTTTTTGCTTT+TGG | - | chr1.1:31327138-31327157 | MS.gene037898:CDS | 30.0% |
!!! | ATCAAAAGAAGGTGTTTTGT+CGG | - | chr1.1:31327986-31328005 | MS.gene037898:intron | 30.0% |
!!! | TGTTTCCTACAGATTTTTTG+TGG | + | chr1.1:31325749-31325768 | None:intergenic | 30.0% |
AAAACTTCATAGCTCGGATA+GGG | + | chr1.1:31327404-31327423 | None:intergenic | 35.0% | |
ACATATGAAGATCCACTTCT+TGG | - | chr1.1:31326544-31326563 | MS.gene037898:CDS | 35.0% | |
AGATTTGCAGGATGATTTCA+TGG | - | chr1.1:31327602-31327621 | MS.gene037898:CDS | 35.0% | |
AGGATCTTGCCAAGAAAATT+TGG | - | chr1.1:31327856-31327875 | MS.gene037898:intron | 35.0% | |
AGGTTTGAAGGTCAGAATTA+TGG | - | chr1.1:31327188-31327207 | MS.gene037898:CDS | 35.0% | |
AGTTCACAGCAATCAAGAAA+GGG | + | chr1.1:31325459-31325478 | None:intergenic | 35.0% | |
ATGATCAGAAGGATAAGTTG+TGG | - | chr1.1:31326836-31326855 | MS.gene037898:CDS | 35.0% | |
ATGATTCCAGCATCTGATAA+AGG | - | chr1.1:31327120-31327139 | MS.gene037898:CDS | 35.0% | |
CAACTGACTAGAAAATCCAA+AGG | + | chr1.1:31328309-31328328 | None:intergenic | 35.0% | |
CAAGATCTTAGAACGATTCT+TGG | + | chr1.1:31327814-31327833 | None:intergenic | 35.0% | |
CACTTGTATGAATGATCAGA+AGG | - | chr1.1:31326825-31326844 | MS.gene037898:CDS | 35.0% | |
CATTTGCATATTGATCGTCA+AGG | + | chr1.1:31327050-31327069 | None:intergenic | 35.0% | |
CCTCATACAAATTCTCAACA+CGG | + | chr1.1:31327023-31327042 | None:intergenic | 35.0% | |
CGTGTTGAGAATTTGTATGA+GGG | - | chr1.1:31327021-31327040 | MS.gene037898:CDS | 35.0% | |
CTTGTCTTCAAACTCAGAAA+GGG | + | chr1.1:31328480-31328499 | None:intergenic | 35.0% | |
GATCTGTTTGAAAGATTTGC+AGG | - | chr1.1:31327590-31327609 | MS.gene037898:CDS | 35.0% | |
GATTTGCAGGATGATTTCAT+GGG | - | chr1.1:31327603-31327622 | MS.gene037898:CDS | 35.0% | |
GGTATTACAATCAAGTCTAC+CGG | - | chr1.1:31326172-31326191 | MS.gene037898:CDS | 35.0% | |
GGTTTGAAGGTCAGAATTAT+GGG | - | chr1.1:31327189-31327208 | MS.gene037898:CDS | 35.0% | |
TAGTTCACAGCAATCAAGAA+AGG | + | chr1.1:31325460-31325479 | None:intergenic | 35.0% | |
TGATGAGTTACGTCGTATTA+TGG | - | chr1.1:31325368-31325387 | MS.gene037898:CDS | 35.0% | |
TGCATAACACGTTTCATCAA+TGG | + | chr1.1:31326922-31326941 | None:intergenic | 35.0% | |
TGCTACATTGACAAATGAGA+AGG | - | chr1.1:31327365-31327384 | MS.gene037898:CDS | 35.0% | |
TGCTTTGATGTTGTAAAGTG+GGG | + | chr1.1:31328267-31328286 | None:intergenic | 35.0% | |
TTCATAGTAGAGTGAGATAC+CGG | + | chr1.1:31326194-31326213 | None:intergenic | 35.0% | |
TTGATCCTGCCACAAAAAAA+TGG | - | chr1.1:31326722-31326741 | MS.gene037898:CDS | 35.0% | |
TTGTCTTCAAACTCAGAAAG+GGG | + | chr1.1:31328479-31328498 | None:intergenic | 35.0% | |
TTTGCATATTGATCGTCAAG+GGG | + | chr1.1:31327048-31327067 | None:intergenic | 35.0% | |
TTTGTACTATTGAGGAGTCT+GGG | - | chr1.1:31327529-31327548 | MS.gene037898:CDS | 35.0% | |
! | AGATTTGTGTTACTGTCAAC+AGG | - | chr1.1:31325332-31325351 | MS.gene037898:CDS | 35.0% |
! | ATGGTGGTTGATATGTGTAA+GGG | - | chr1.1:31327909-31327928 | MS.gene037898:intron | 35.0% |
! | CAGAGAACTGTTATTTGGAT+GGG | - | chr1.1:31327261-31327280 | MS.gene037898:CDS | 35.0% |
! | GCCAAAACACCAAATTTTCT+TGG | + | chr1.1:31327868-31327887 | None:intergenic | 35.0% |
! | GGCATACATTTTTGCAAAGT+TGG | + | chr1.1:31326644-31326663 | None:intergenic | 35.0% |
! | TAGAATACACTCTGATTTGC+AGG | + | chr1.1:31325973-31325992 | None:intergenic | 35.0% |
! | TTTGACACATAAAGCATCAG+AGG | + | chr1.1:31327099-31327118 | None:intergenic | 35.0% |
!! | ACGTTTTTGAAGAAATGCAG+AGG | - | chr1.1:31328234-31328253 | MS.gene037898:intron | 35.0% |
!! | ATTAATCTCATTGATTCCCC+TGG | - | chr1.1:31326271-31326290 | MS.gene037898:CDS | 35.0% |
!! | TTAATCTCATTGATTCCCCT+GGG | - | chr1.1:31326272-31326291 | MS.gene037898:CDS | 35.0% |
!!! | GCCAAGAAAATTTGGTGTTT+TGG | - | chr1.1:31327864-31327883 | MS.gene037898:intron | 35.0% |
AAAGCAACAGTGTTACCACA+AGG | + | chr1.1:31327315-31327334 | None:intergenic | 40.0% | |
AAAGCAACTGTTCCTTTCTC+TGG | + | chr1.1:31326586-31326605 | None:intergenic | 40.0% | |
AAATGGACCACCAAGAATAC+TGG | - | chr1.1:31326739-31326758 | MS.gene037898:CDS | 40.0% | |
AACCTTCCTTTATCAGATGC+TGG | + | chr1.1:31327129-31327148 | None:intergenic | 40.0% | |
AAGATCTTGTCCGAACAGTA+TGG | - | chr1.1:31327825-31327844 | MS.gene037898:intron | 40.0% | |
AAGCTCTTGGAGAAAGGATT+AGG | - | chr1.1:31326407-31326426 | MS.gene037898:CDS | 40.0% | |
AATCCAAAGGACTCAATGAC+AGG | + | chr1.1:31328296-31328315 | None:intergenic | 40.0% | |
AATCTCTCAAGAGGTTCAAG+GGG | - | chr1.1:31326224-31326243 | MS.gene037898:CDS | 40.0% | |
AATGATCAAAGACACACTGG+GGG | + | chr1.1:31328358-31328377 | None:intergenic | 40.0% | |
AATTCTGACCTTCAAACCTG+TGG | + | chr1.1:31327187-31327206 | None:intergenic | 40.0% | |
ACACATATCAACCACCATGT+TGG | + | chr1.1:31327907-31327926 | None:intergenic | 40.0% | |
ACAGATCTTTCTTCTCTCCA+GGG | + | chr1.1:31327227-31327246 | None:intergenic | 40.0% | |
ACCATAACATCACCAAGAAG+TGG | + | chr1.1:31326559-31326578 | None:intergenic | 40.0% | |
AGACGGAAAACTTCATAGCT+CGG | + | chr1.1:31327410-31327429 | None:intergenic | 40.0% | |
ATCCAAAGGACTCAATGACA+GGG | + | chr1.1:31328295-31328314 | None:intergenic | 40.0% | |
CAAGTGCTCCATCAGTAATA+CGG | + | chr1.1:31326333-31326352 | None:intergenic | 40.0% | |
CAATGATCAAAGACACACTG+GGG | + | chr1.1:31328359-31328378 | None:intergenic | 40.0% | |
CAATTACCCTTGAAAAGGTC+TGG | + | chr1.1:31326501-31326520 | None:intergenic | 40.0% | |
CACATATCAACCACCATGTT+GGG | + | chr1.1:31327906-31327925 | None:intergenic | 40.0% | |
CCAATGATCAAAGACACACT+GGG | + | chr1.1:31328360-31328379 | None:intergenic | 40.0% | |
CCAGTGTGTCTTTGATCATT+GGG | - | chr1.1:31328358-31328377 | MS.gene037898:CDS | 40.0% | |
CCATCCAAATAACAGTTCTC+TGG | + | chr1.1:31327263-31327282 | None:intergenic | 40.0% | |
CCGTGTTGAGAATTTGTATG+AGG | - | chr1.1:31327020-31327039 | MS.gene037898:CDS | 40.0% | |
GAAAACTTCATAGCTCGGAT+AGG | + | chr1.1:31327405-31327424 | None:intergenic | 40.0% | |
GAATCTCTCAAGAGGTTCAA+GGG | - | chr1.1:31326223-31326242 | MS.gene037898:CDS | 40.0% | |
GAATGAAATCAAGGATTCCG+TGG | - | chr1.1:31327944-31327963 | MS.gene037898:intron | 40.0% | |
GCTTGTCTTCAAACTCAGAA+AGG | + | chr1.1:31328481-31328500 | None:intergenic | 40.0% | |
GTGATTTACTCATCACTGTG+CGG | + | chr1.1:31327695-31327714 | None:intergenic | 40.0% | |
GTGTCCAGAGAACTGTTATT+TGG | - | chr1.1:31327256-31327275 | MS.gene037898:CDS | 40.0% | |
GTTATGGTGTATCCAGAGAA+AGG | - | chr1.1:31326571-31326590 | MS.gene037898:CDS | 40.0% | |
GTTTGTACTATTGAGGAGTC+TGG | - | chr1.1:31327528-31327547 | MS.gene037898:CDS | 40.0% | |
TAAGGTTTCCACAGGTTTGA+AGG | - | chr1.1:31327176-31327195 | MS.gene037898:CDS | 40.0% | |
TACAGATCTTTCTTCTCTCC+AGG | + | chr1.1:31327228-31327247 | None:intergenic | 40.0% | |
TATTTGGATGGGAAAGAGAC+AGG | - | chr1.1:31327272-31327291 | MS.gene037898:CDS | 40.0% | |
TGAAACGTGTTATGCAAACC+TGG | - | chr1.1:31326926-31326945 | MS.gene037898:CDS | 40.0% | |
TGAATCTCTCAAGAGGTTCA+AGG | - | chr1.1:31326222-31326241 | MS.gene037898:CDS | 40.0% | |
TGACTGATGAATCTCTCAAG+AGG | - | chr1.1:31326215-31326234 | MS.gene037898:CDS | 40.0% | |
TGGATTTCCACCATGTAAAC+AGG | + | chr1.1:31328158-31328177 | None:intergenic | 40.0% | |
TGTTGAAGGTCTCAAACGTT+TGG | - | chr1.1:31327485-31327504 | MS.gene037898:CDS | 40.0% | |
TTCCAGCATCTGATAAAGGA+AGG | - | chr1.1:31327124-31327143 | MS.gene037898:CDS | 40.0% | |
TTCTCTCCAGGGACAAAATT+TGG | + | chr1.1:31327216-31327235 | None:intergenic | 40.0% | |
TTGAGACCTTCAACAAGCTT+GGG | + | chr1.1:31327480-31327499 | None:intergenic | 40.0% | |
TTGCATATTGATCGTCAAGG+GGG | + | chr1.1:31327047-31327066 | None:intergenic | 40.0% | |
TTGTACTATTGAGGAGTCTG+GGG | - | chr1.1:31327530-31327549 | MS.gene037898:CDS | 40.0% | |
TTGTCGGAAGAAAACATGAG+AGG | - | chr1.1:31328002-31328021 | MS.gene037898:intron | 40.0% | |
TTTGGCTAAGTCAGATCCTA+TGG | - | chr1.1:31327503-31327522 | MS.gene037898:CDS | 40.0% | |
! | AGTGTTCTGAATCAGAAACG+TGG | - | chr1.1:31328209-31328228 | MS.gene037898:intron | 40.0% |
! | CATGGTGGTTGATATGTGTA+AGG | - | chr1.1:31327908-31327927 | MS.gene037898:intron | 40.0% |
! | CCAGAGAACTGTTATTTGGA+TGG | - | chr1.1:31327260-31327279 | MS.gene037898:CDS | 40.0% |
! | GTGTTCTGAATCAGAAACGT+GGG | - | chr1.1:31328210-31328229 | MS.gene037898:intron | 40.0% |
! | TATTACTGATGGAGCACTTG+TGG | - | chr1.1:31326333-31326352 | MS.gene037898:CDS | 40.0% |
! | TTGTGGTAACACTGTTGCTT+TGG | - | chr1.1:31327314-31327333 | MS.gene037898:CDS | 40.0% |
! | TTTGAGACCTTCAACAAGCT+TGG | + | chr1.1:31327481-31327500 | None:intergenic | 40.0% |
!! | GTGTTGATGATCTGCTTGAT+AGG | + | chr1.1:31326808-31326827 | None:intergenic | 40.0% |
!! | TCCACTTCTTGGTGATGTTA+TGG | - | chr1.1:31326555-31326574 | MS.gene037898:CDS | 40.0% |
!!! | CTTGGTGGTCCATTTTTTTG+TGG | + | chr1.1:31326734-31326753 | None:intergenic | 40.0% |
AAACCTTACCGGCAAACACA+CGG | + | chr1.1:31327164-31327183 | None:intergenic | 45.0% | |
AAAGAGACAGGAGACTGTTG+AGG | - | chr1.1:31327284-31327303 | MS.gene037898:CDS | 45.0% | |
AATCACCCAACAAGCACAAC+CGG | - | chr1.1:31327709-31327728 | MS.gene037898:intron | 45.0% | |
AATTCTCAACACGGTACCTC+TGG | + | chr1.1:31327014-31327033 | None:intergenic | 45.0% | |
ACTTGTGGTAGTTGACTGTG+TGG | - | chr1.1:31326348-31326367 | MS.gene037898:CDS | 45.0% | |
AGATCATTCCTACTGCTAGG+AGG | - | chr1.1:31328087-31328106 | MS.gene037898:intron | 45.0% | |
AGCTGAACCAGTATTCTTGG+TGG | + | chr1.1:31326749-31326768 | None:intergenic | 45.0% | |
AGTTGAGAGCTGCAACATCT+GGG | - | chr1.1:31328324-31328343 | MS.gene037898:CDS | 45.0% | |
ATCCGAAACTGTGATCCTGA+AGG | - | chr1.1:31327072-31327091 | MS.gene037898:CDS | 45.0% | |
ATCTCTCAAGAGGTTCAAGG+GGG | - | chr1.1:31326225-31326244 | MS.gene037898:CDS | 45.0% | |
ATTATTGCCCAGGAAGTTGC+AGG | - | chr1.1:31326106-31326125 | MS.gene037898:CDS | 45.0% | |
ATTCTCAACACGGTACCTCT+GGG | + | chr1.1:31327013-31327032 | None:intergenic | 45.0% | |
CAAACCTGTGGAAACCTTAC+CGG | + | chr1.1:31327175-31327194 | None:intergenic | 45.0% | |
CACCATGAAGTCTGATGAGA+AGG | - | chr1.1:31326882-31326901 | MS.gene037898:CDS | 45.0% | |
CCCAATGATCAAAGACACAC+TGG | + | chr1.1:31328361-31328380 | None:intergenic | 45.0% | |
CCCAGTGTGTCTTTGATCAT+TGG | - | chr1.1:31328357-31328376 | MS.gene037898:CDS | 45.0% | |
CGAAGCTGAACCAGTATTCT+TGG | + | chr1.1:31326752-31326771 | None:intergenic | 45.0% | |
CTTGTCCCAACCATACTGTT+CGG | + | chr1.1:31327838-31327857 | None:intergenic | 45.0% | |
CTTGTCCGAACAGTATGGTT+GGG | - | chr1.1:31327830-31327849 | MS.gene037898:intron | 45.0% | |
GATCATTCCTACTGCTAGGA+GGG | - | chr1.1:31328088-31328107 | MS.gene037898:intron | 45.0% | |
GATGTTGTAAAGTGGGGTAC+CGG | + | chr1.1:31328261-31328280 | None:intergenic | 45.0% | |
GTACATGGAAGCAAGACCAT+TGG | - | chr1.1:31327734-31327753 | MS.gene037898:intron | 45.0% | |
GTCAGATCATTCCTACTGCT+AGG | - | chr1.1:31328084-31328103 | MS.gene037898:intron | 45.0% | |
GTCATTGCTCATGTTGACCA+CGG | - | chr1.1:31325420-31325439 | MS.gene037898:CDS | 45.0% | |
GTCCTTCAGGATCACAGTTT+CGG | + | chr1.1:31327077-31327096 | None:intergenic | 45.0% | |
GTCCTTCTCATCAGACTTCA+TGG | + | chr1.1:31326887-31326906 | None:intergenic | 45.0% | |
TCATCAATGGCTTACCCATC+AGG | + | chr1.1:31326909-31326928 | None:intergenic | 45.0% | |
TCCTATTGTGCCCTCATCAA+TGG | + | chr1.1:31327778-31327797 | None:intergenic | 45.0% | |
TCTCCCTGAATGACACAACA+GGG | + | chr1.1:31327653-31327672 | None:intergenic | 45.0% | |
TCTGATGAGAAGGACCTGAT+GGG | - | chr1.1:31326892-31326911 | MS.gene037898:CDS | 45.0% | |
TCTTGTCCGAACAGTATGGT+TGG | - | chr1.1:31327829-31327848 | MS.gene037898:intron | 45.0% | |
TTCCAGTGGGCATCAAAAGA+AGG | - | chr1.1:31327975-31327994 | MS.gene037898:intron | 45.0% | |
TTGCAGGATGATTTCATGGG+TGG | - | chr1.1:31327606-31327625 | MS.gene037898:CDS | 45.0% | |
TTGTTATGGACATCCGCAAG+AGG | - | chr1.1:31328429-31328448 | MS.gene037898:intron | 45.0% | |
TTTGAAGAAATGCAGAGGCC+CGG | - | chr1.1:31328239-31328258 | MS.gene037898:intron | 45.0% | |
! | AGGCATACCAGACCTTTTCA+AGG | - | chr1.1:31326491-31326510 | MS.gene037898:CDS | 45.0% |
! | ATGGGACCAAATTTTGTCCC+TGG | - | chr1.1:31327207-31327226 | MS.gene037898:CDS | 45.0% |
! | ATGTTGTAAAGTGGGGTACC+GGG | + | chr1.1:31328260-31328279 | None:intergenic | 45.0% |
! | CTCGTCAACGCCAAATTTTG+AGG | + | chr1.1:31326665-31326684 | None:intergenic | 45.0% |
! | GGCATACCAGACCTTTTCAA+GGG | - | chr1.1:31326492-31326511 | MS.gene037898:CDS | 45.0% |
! | TAAAGCATCAGAGGTCCTTC+AGG | + | chr1.1:31327090-31327109 | None:intergenic | 45.0% |
! | TGACCCTGTTGTGTCATTCA+GGG | - | chr1.1:31327647-31327666 | MS.gene037898:CDS | 45.0% |
!! | ACAAGCTGCACAGCTTGTTA+TGG | - | chr1.1:31328415-31328434 | MS.gene037898:intron | 45.0% |
!! | CACTGTTGCTTTGGTTGGTT+TGG | - | chr1.1:31327323-31327342 | MS.gene037898:CDS | 45.0% |
!! | GATCTTCCCAAGCTTGTTGA+AGG | - | chr1.1:31327471-31327490 | MS.gene037898:CDS | 45.0% |
!! | GGTAACACTGTTGCTTTGGT+TGG | - | chr1.1:31327318-31327337 | MS.gene037898:CDS | 45.0% |
!! | TTCTGCTGGTTTGCATGGTT+GGG | - | chr1.1:31326606-31326625 | MS.gene037898:CDS | 45.0% |
!! | TTTCTGCTGGTTTGCATGGT+TGG | - | chr1.1:31326605-31326624 | MS.gene037898:CDS | 45.0% |
!!! | GCTTTTTCTGCTGGTTTGCA+TGG | - | chr1.1:31326601-31326620 | MS.gene037898:CDS | 45.0% |
!!! | GGAACAGTTGCTTTTTCTGC+TGG | - | chr1.1:31326592-31326611 | MS.gene037898:CDS | 45.0% |
!!! | GTGGTCCATTTTTTTGTGGC+AGG | + | chr1.1:31326730-31326749 | None:intergenic | 45.0% |
AACAGCAACACGCACAACAG+GGG | + | chr1.1:31327433-31327452 | None:intergenic | 50.0% | |
ACTGATGCTATCCACAGAGG+AGG | - | chr1.1:31328059-31328078 | MS.gene037898:intron | 50.0% | |
ACTGTTGAGGATGTGCCTTG+TGG | - | chr1.1:31327297-31327316 | MS.gene037898:CDS | 50.0% | |
ACTTCATAGCTCGGATAGGG+TGG | + | chr1.1:31327401-31327420 | None:intergenic | 50.0% | |
ACTTGCAGAGGCCATTGATG+AGG | - | chr1.1:31327764-31327783 | MS.gene037898:intron | 50.0% | |
ATCAAGGATTCCGTGGTTGC+TGG | - | chr1.1:31327951-31327970 | MS.gene037898:intron | 50.0% | |
ATGGACATCCGCAAGAGGAA+GGG | - | chr1.1:31328434-31328453 | MS.gene037898:intron | 50.0% | |
CAAAGGACTCAATGACAGGG+AGG | + | chr1.1:31328292-31328311 | None:intergenic | 50.0% | |
CACACTGATGCTATCCACAG+AGG | - | chr1.1:31328056-31328075 | MS.gene037898:intron | 50.0% | |
CACCATGACCTCAGATCCTT+TGG | - | chr1.1:31328382-31328401 | MS.gene037898:CDS | 50.0% | |
CAGTTGAGAGCTGCAACATC+TGG | - | chr1.1:31328323-31328342 | MS.gene037898:CDS | 50.0% | |
CATGACCTCAGATCCTTTGG+AGG | - | chr1.1:31328385-31328404 | MS.gene037898:CDS | 50.0% | |
CATGGAAGCAAGACCATTGG+AGG | - | chr1.1:31327737-31327756 | MS.gene037898:intron | 50.0% | |
CGAACAGTATGGTTGGGACA+AGG | - | chr1.1:31327836-31327855 | MS.gene037898:intron | 50.0% | |
CGATTCTTGGGATCATCCCT+TGG | + | chr1.1:31327801-31327820 | None:intergenic | 50.0% | |
CGTTGACGAGTCCAAGATGA+TGG | - | chr1.1:31326675-31326694 | MS.gene037898:CDS | 50.0% | |
CTCCCTGTCATTGAGTCCTT+TGG | - | chr1.1:31328290-31328309 | MS.gene037898:intron | 50.0% | |
CTTCATAGCTCGGATAGGGT+GGG | + | chr1.1:31327400-31327419 | None:intergenic | 50.0% | |
CTTGCAGAGGCCATTGATGA+GGG | - | chr1.1:31327765-31327784 | MS.gene037898:intron | 50.0% | |
GAACACATTGTTGCTGGTGC+AGG | - | chr1.1:31327552-31327571 | MS.gene037898:CDS | 50.0% | |
GAACAGCAACACGCACAACA+GGG | + | chr1.1:31327434-31327453 | None:intergenic | 50.0% | |
GAAGCAAGACCATTGGAGGA+TGG | - | chr1.1:31327741-31327760 | MS.gene037898:intron | 50.0% | |
GACATCACCTGCAACTTCCT+GGG | + | chr1.1:31326116-31326135 | None:intergenic | 50.0% | |
GCTGCACTCCGTATTACTGA+TGG | - | chr1.1:31326322-31326341 | MS.gene037898:CDS | 50.0% | |
GTCGCAGCACAGTTTCAGTT+TGG | + | chr1.1:31326387-31326406 | None:intergenic | 50.0% | |
GTCTCCCTGAATGACACAAC+AGG | + | chr1.1:31327654-31327673 | None:intergenic | 50.0% | |
GTCTGATGAGAAGGACCTGA+TGG | - | chr1.1:31326891-31326910 | MS.gene037898:CDS | 50.0% | |
GTCTTGCTTCCATGTACAGC+CGG | + | chr1.1:31327731-31327750 | None:intergenic | 50.0% | |
GTGGTAGTTGACTGTGTGGA+AGG | - | chr1.1:31326352-31326371 | MS.gene037898:CDS | 50.0% | |
TAAACAGGCTCCAGAAGCCT+GGG | + | chr1.1:31328143-31328162 | None:intergenic | 50.0% | |
TACAGCCGGTTGTGCTTGTT+GGG | + | chr1.1:31327717-31327736 | None:intergenic | 50.0% | |
TAGAAGACCCTCCTAGCAGT+AGG | + | chr1.1:31328098-31328117 | None:intergenic | 50.0% | |
TATGGACATCCGCAAGAGGA+AGG | - | chr1.1:31328433-31328452 | MS.gene037898:intron | 50.0% | |
TCTAGTAGGGCAGTACTTGC+TGG | + | chr1.1:31326955-31326974 | None:intergenic | 50.0% | |
TCTGCAAGTCCATCCTCCAA+TGG | + | chr1.1:31327753-31327772 | None:intergenic | 50.0% | |
TCTGGGGAACACATTGTTGC+TGG | - | chr1.1:31327546-31327565 | MS.gene037898:CDS | 50.0% | |
TGAACAGCAACACGCACAAC+AGG | + | chr1.1:31327435-31327454 | None:intergenic | 50.0% | |
TGCGACAAGCTCTTGGAGAA+AGG | - | chr1.1:31326401-31326420 | MS.gene037898:CDS | 50.0% | |
TGCTCATGTTGACCACGGTA+TGG | - | chr1.1:31325425-31325444 | MS.gene037898:CDS | 50.0% | |
TGTGGATAGCATCAGTGTGC+AGG | + | chr1.1:31328055-31328074 | None:intergenic | 50.0% | |
TTTGCCGGTAAGGTTTCCAC+AGG | - | chr1.1:31327168-31327187 | MS.gene037898:CDS | 50.0% | |
! | ATACCACCAAGAGCTTGCTC+AGG | + | chr1.1:31328185-31328204 | None:intergenic | 50.0% |
! | ATGAGGGCACAATAGGACCA+AGG | - | chr1.1:31327781-31327800 | MS.gene037898:intron | 50.0% |
! | ATTGGAGGATGGACTTGCAG+AGG | - | chr1.1:31327752-31327771 | MS.gene037898:intron | 50.0% |
! | CACCTTCTTTTGATGCCCAC+TGG | + | chr1.1:31327980-31327999 | None:intergenic | 50.0% |
! | CTCCAAAGGATCTGAGGTCA+TGG | + | chr1.1:31328387-31328406 | None:intergenic | 50.0% |
! | CTGACCCTGTTGTGTCATTC+AGG | - | chr1.1:31327646-31327665 | MS.gene037898:CDS | 50.0% |
! | GCCATTGATGAGGGCACAAT+AGG | - | chr1.1:31327774-31327793 | MS.gene037898:intron | 50.0% |
! | TCTGGAGCCTGTTTACATGG+TGG | - | chr1.1:31328148-31328167 | MS.gene037898:intron | 50.0% |
! | TGAGGGCACAATAGGACCAA+GGG | - | chr1.1:31327782-31327801 | MS.gene037898:intron | 50.0% |
! | TTCCTTGAGCTCCAGGTTGA+TGG | - | chr1.1:31326463-31326482 | MS.gene037898:CDS | 50.0% |
!! | AAGATGATGGAGAGGCTCTG+GGG | - | chr1.1:31326688-31326707 | MS.gene037898:CDS | 50.0% |
!! | ACCCCTAGCTTTGTGAGCAT+GGG | + | chr1.1:31326862-31326881 | None:intergenic | 50.0% |
!! | ACGAGTCCAAGATGATGGAG+AGG | - | chr1.1:31326680-31326699 | MS.gene037898:CDS | 50.0% |
!! | CAAGATGATGGAGAGGCTCT+GGG | - | chr1.1:31326687-31326706 | MS.gene037898:CDS | 50.0% |
!! | GCTTCTGGAGCCTGTTTACA+TGG | - | chr1.1:31328145-31328164 | MS.gene037898:intron | 50.0% |
AACACGCACAACAGGGGAGA+CGG | + | chr1.1:31327427-31327446 | None:intergenic | 55.0% | |
ACGCTCAGCTTCATCAGCAC+GGG | + | chr1.1:31326152-31326171 | None:intergenic | 55.0% | |
ACTGTGCTGCGACAAGCTCT+TGG | - | chr1.1:31326394-31326413 | MS.gene037898:CDS | 55.0% | |
AGGGCTTGAAGTCCATACCG+TGG | + | chr1.1:31325440-31325459 | None:intergenic | 55.0% | |
ATCAACCACCATGTTGGGCC+CGG | + | chr1.1:31327901-31327920 | None:intergenic | 55.0% | |
ATGAGAAGTCGACGTGCCCA+GGG | + | chr1.1:31326291-31326310 | None:intergenic | 55.0% | |
ATGCCTCCTCTCCATCAACC+TGG | + | chr1.1:31326477-31326496 | None:intergenic | 55.0% | |
CAAGCACAACCGGCTGTACA+TGG | - | chr1.1:31327719-31327738 | MS.gene037898:intron | 55.0% | |
CAAGCTCCTGAGCAAGCTCT+TGG | - | chr1.1:31328176-31328195 | MS.gene037898:intron | 55.0% | |
CACGCTCAGCTTCATCAGCA+CGG | + | chr1.1:31326153-31326172 | None:intergenic | 55.0% | |
CAGCACGGGTGTCAGTCATA+CGG | + | chr1.1:31326138-31326157 | None:intergenic | 55.0% | |
CCACTGGAATCCAGCAACCA+CGG | + | chr1.1:31327964-31327983 | None:intergenic | 55.0% | |
CCAGAGCCTCTCCATCATCT+TGG | + | chr1.1:31326689-31326708 | None:intergenic | 55.0% | |
CCTTGAGTCCCTTCCTCTTG+CGG | + | chr1.1:31328445-31328464 | None:intergenic | 55.0% | |
CGTGGTTGCTGGATTCCAGT+GGG | - | chr1.1:31327962-31327981 | MS.gene037898:intron | 55.0% | |
CTCCATCAACCTGGAGCTCA+AGG | + | chr1.1:31326468-31326487 | None:intergenic | 55.0% | |
CTCTGGGCAGTATGTGGTGA+GGG | + | chr1.1:31326997-31327016 | None:intergenic | 55.0% | |
GATGCTATCCACAGAGGAGG+TGG | - | chr1.1:31328062-31328081 | MS.gene037898:intron | 55.0% | |
GCCCATGCTCACAAAGCTAG+GGG | - | chr1.1:31326858-31326877 | MS.gene037898:CDS | 55.0% | |
GCTTGTGATCCAGCCTCCAA+AGG | + | chr1.1:31328401-31328420 | None:intergenic | 55.0% | |
GGACATCACCTGCAACTTCC+TGG | + | chr1.1:31326117-31326136 | None:intergenic | 55.0% | |
GGCCCATGCTCACAAAGCTA+GGG | - | chr1.1:31326857-31326876 | MS.gene037898:CDS | 55.0% | |
GTAAACAGGCTCCAGAAGCC+TGG | + | chr1.1:31328144-31328163 | None:intergenic | 55.0% | |
GTACAGCCGGTTGTGCTTGT+TGG | + | chr1.1:31327718-31327737 | None:intergenic | 55.0% | |
GTTCAGCTTCGTGCAAGCGT+GGG | - | chr1.1:31326761-31326780 | MS.gene037898:CDS | 55.0% | |
TCCAGCCTCCAAAGGATCTG+AGG | + | chr1.1:31328393-31328412 | None:intergenic | 55.0% | |
TGATCTGACCACCTCCTCTG+TGG | + | chr1.1:31328073-31328092 | None:intergenic | 55.0% | |
TGCTGCGGGAATTATTGCCC+AGG | - | chr1.1:31326096-31326115 | MS.gene037898:CDS | 55.0% | |
TGGCCCATGCTCACAAAGCT+AGG | - | chr1.1:31326856-31326875 | MS.gene037898:CDS | 55.0% | |
! | ACCTCAGATCCTTTGGAGGC+TGG | - | chr1.1:31328389-31328408 | MS.gene037898:CDS | 55.0% |
! | AGGTTCAAGGGGGAGCGTAA+TGG | - | chr1.1:31326235-31326254 | MS.gene037898:CDS | 55.0% |
! | CAAGAGCTTGCTCAGGAGCT+TGG | + | chr1.1:31328178-31328197 | None:intergenic | 55.0% |
! | GCGTGTTGCTGTTCAGTGCA+AGG | - | chr1.1:31327440-31327459 | MS.gene037898:CDS | 55.0% |
! | GCTTTTGGCCGTGTGTTTGC+CGG | - | chr1.1:31327153-31327172 | MS.gene037898:CDS | 55.0% |
!! | CCAAGATGATGGAGAGGCTC+TGG | - | chr1.1:31326686-31326705 | MS.gene037898:CDS | 55.0% |
!! | GACCCCTAGCTTTGTGAGCA+TGG | + | chr1.1:31326863-31326882 | None:intergenic | 55.0% |
!! | GCACGTCGACTTCTCATCTG+AGG | - | chr1.1:31326294-31326313 | MS.gene037898:CDS | 55.0% |
!! | TGAGCTCCAGGTTGATGGAG+AGG | - | chr1.1:31326468-31326487 | MS.gene037898:CDS | 55.0% |
!!! | TGTTTTGGCCCTGAGACCAC+CGG | - | chr1.1:31327879-31327898 | MS.gene037898:intron | 55.0% |
AGGCTCCAGAAGCCTGGGTT+TGG | + | chr1.1:31328138-31328157 | None:intergenic | 60.0% | |
CACAGCCAAACCCAGGCTTC+TGG | - | chr1.1:31328130-31328149 | MS.gene037898:intron | 60.0% | |
CACAGCTCACAGCCAAACCC+AGG | - | chr1.1:31328123-31328142 | MS.gene037898:intron | 60.0% | |
CAGGTGCTTCCTTGAGCTCC+AGG | - | chr1.1:31326456-31326475 | MS.gene037898:CDS | 60.0% | |
CCGCAAGAGGAAGGGACTCA+AGG | - | chr1.1:31328442-31328461 | MS.gene037898:intron | 60.0% | |
CCGTGGTTGCTGGATTCCAG+TGG | - | chr1.1:31327961-31327980 | MS.gene037898:intron | 60.0% | |
CCTCACCACATACTGCCCAG+AGG | - | chr1.1:31326995-31327014 | MS.gene037898:CDS | 60.0% | |
CCTCTGGGCAGTATGTGGTG+AGG | + | chr1.1:31326998-31327017 | None:intergenic | 60.0% | |
CGACTCTCTAGTCGCTGCTG+CGG | - | chr1.1:31326081-31326100 | MS.gene037898:CDS | 60.0% | |
CGCAGCAGCGACTAGAGAGT+CGG | + | chr1.1:31326083-31326102 | None:intergenic | 60.0% | |
CGGTACCTCTGGGCAGTATG+TGG | + | chr1.1:31327003-31327022 | None:intergenic | 60.0% | |
GACTCTCTAGTCGCTGCTGC+GGG | - | chr1.1:31326082-31326101 | MS.gene037898:CDS | 60.0% | |
GAGAGCTGCAACATCTGGGC+AGG | - | chr1.1:31328328-31328347 | MS.gene037898:CDS | 60.0% | |
GATGAGAAGTCGACGTGCCC+AGG | + | chr1.1:31326292-31326311 | None:intergenic | 60.0% | |
GCTCCTGAGCAAGCTCTTGG+TGG | - | chr1.1:31328179-31328198 | MS.gene037898:intron | 60.0% | |
GGGTTTGGCTGTGAGCTGTG+AGG | + | chr1.1:31328123-31328142 | None:intergenic | 60.0% | |
GGTTCAGCTTCGTGCAAGCG+TGG | - | chr1.1:31326760-31326779 | MS.gene037898:CDS | 60.0% | |
TGAGAAGTCGACGTGCCCAG+GGG | + | chr1.1:31326290-31326309 | None:intergenic | 60.0% | |
TGGCCGTGTGTTTGCCGGTA+AGG | - | chr1.1:31327158-31327177 | MS.gene037898:CDS | 60.0% | |
! | CGTGCTGATGAAGCTGAGCG+TGG | - | chr1.1:31326151-31326170 | MS.gene037898:CDS | 60.0% |
! | GGCAGTACTTGCTGGCAACC+AGG | + | chr1.1:31326947-31326966 | None:intergenic | 60.0% |
!! | GCTCCAGGTTGATGGAGAGG+AGG | - | chr1.1:31326471-31326490 | MS.gene037898:CDS | 60.0% |
!! | GTTTTGGCCCTGAGACCACC+GGG | - | chr1.1:31327880-31327899 | MS.gene037898:intron | 60.0% |
AACCACCATGTTGGGCCCGG+TGG | + | chr1.1:31327898-31327917 | None:intergenic | 65.0% | |
ATGTTGGGCCCGGTGGTCTC+AGG | + | chr1.1:31327891-31327910 | None:intergenic | 65.0% | |
TGAGACCACCGGGCCCAACA+TGG | - | chr1.1:31327890-31327909 | MS.gene037898:intron | 65.0% | |
TGTTGGGCCCGGTGGTCTCA+GGG | + | chr1.1:31327890-31327909 | None:intergenic | 65.0% | |
GACCACCGGGCCCAACATGG+TGG | - | chr1.1:31327893-31327912 | MS.gene037898:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 31325258 | 31328505 | 31325258 | ID=MS.gene037898 |
chr1.1 | mRNA | 31325258 | 31328505 | 31325258 | ID=MS.gene037898.t1;Parent=MS.gene037898 |
chr1.1 | exon | 31328503 | 31328505 | 31328503 | ID=MS.gene037898.t1.exon1;Parent=MS.gene037898.t1 |
chr1.1 | CDS | 31328503 | 31328505 | 31328503 | ID=cds.MS.gene037898.t1;Parent=MS.gene037898.t1 |
chr1.1 | exon | 31328322 | 31328409 | 31328322 | ID=MS.gene037898.t1.exon2;Parent=MS.gene037898.t1 |
chr1.1 | CDS | 31328322 | 31328409 | 31328322 | ID=cds.MS.gene037898.t1;Parent=MS.gene037898.t1 |
chr1.1 | exon | 31325258 | 31327698 | 31325258 | ID=MS.gene037898.t1.exon3;Parent=MS.gene037898.t1 |
chr1.1 | CDS | 31325258 | 31327698 | 31325258 | ID=cds.MS.gene037898.t1;Parent=MS.gene037898.t1 |
Gene Sequence |
Protein sequence |