Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008760.t1 | XP_003624868.1 | 97.5 | 203 | 5 | 0 | 3 | 205 | 2 | 204 | 5.80E-108 | 400.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008760.t1 | Q9XI05 | 92.1 | 203 | 16 | 0 | 3 | 205 | 2 | 204 | 6.0e-106 | 384.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008760.t1 | G7L4S2 | 97.5 | 203 | 5 | 0 | 3 | 205 | 2 | 204 | 4.1e-108 | 400.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008760.t1 | MTR_7g088490 | 97.537 | 203 | 5 | 0 | 3 | 205 | 2 | 204 | 5.28e-149 | 412 |
| MS.gene008760.t1 | MTR_4g087680 | 96.059 | 203 | 8 | 0 | 3 | 205 | 2 | 204 | 2.09e-146 | 405 |
| MS.gene008760.t1 | MTR_2g098010 | 32.558 | 129 | 87 | 0 | 3 | 131 | 9 | 137 | 3.21e-16 | 74.3 |
| MS.gene008760.t1 | MTR_5g079740 | 32.558 | 129 | 87 | 0 | 3 | 131 | 9 | 137 | 3.52e-16 | 74.3 |
| MS.gene008760.t1 | MTR_3g089040 | 26.455 | 189 | 137 | 2 | 9 | 197 | 54 | 240 | 8.25e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008760.t1 | AT1G21720 | 92.118 | 203 | 16 | 0 | 3 | 205 | 2 | 204 | 9.67e-143 | 396 |
| MS.gene008760.t1 | AT1G77440 | 92.611 | 203 | 15 | 0 | 3 | 205 | 2 | 204 | 1.22e-141 | 393 |
| MS.gene008760.t1 | AT1G77440 | 92.611 | 203 | 15 | 0 | 3 | 205 | 2 | 204 | 1.22e-141 | 393 |
| MS.gene008760.t1 | AT3G60820 | 25.806 | 217 | 145 | 3 | 3 | 205 | 9 | 223 | 6.00e-17 | 76.6 |
| MS.gene008760.t1 | AT3G60820 | 25.806 | 217 | 145 | 3 | 3 | 205 | 9 | 223 | 6.00e-17 | 76.6 |
| MS.gene008760.t1 | AT3G60820 | 32.558 | 129 | 87 | 0 | 3 | 131 | 9 | 137 | 1.21e-16 | 75.5 |
Find 46 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTCTTCATCGGTCTTTC+TGG | 0.122403 | 4.4:-25780481 | MS.gene008760:CDS |
| ACAAACTATGTCGTCGATTT+TGG | 0.138710 | 4.4:-25780632 | None:intergenic |
| GAAGAGTTTATCATGAATTT+TGG | 0.140707 | 4.4:+25780495 | None:intergenic |
| CAGCCTGTAATTGCTGGATT+AGG | 0.273487 | 4.4:-25779214 | MS.gene008760:CDS |
| AGCCTGTAATTGCTGGATTA+GGG | 0.310212 | 4.4:-25779213 | MS.gene008760:CDS |
| GCAAAAGACTTCGTTGTTGC+TGG | 0.312434 | 4.4:-25777145 | MS.gene008760:CDS |
| ATCCTTTCCTTTACTTCTGT+TGG | 0.340096 | 4.4:+25775350 | None:intergenic |
| TCCCCTAATCCAGCAATTAC+AGG | 0.353996 | 4.4:+25779211 | None:intergenic |
| ACCGTGACTGTCTTAGTGGC+TGG | 0.366163 | 4.4:-25775964 | MS.gene008760:CDS |
| TCTTGCCAACCATGGCTACT+TGG | 0.368373 | 4.4:+25780593 | None:intergenic |
| ATTACAGGCTGGCAAAAGTA+TGG | 0.375854 | 4.4:+25779226 | None:intergenic |
| TTTGGAAATTCTTTGGAAAT+CGG | 0.398276 | 4.4:+25780513 | None:intergenic |
| GTAGACCGTGACTGTCTTAG+TGG | 0.447953 | 4.4:-25775968 | MS.gene008760:CDS |
| GCGTCCATTGTGCAAATGAA+TGG | 0.449188 | 4.4:+25779178 | None:intergenic |
| TAGTTACAGTGTTTGAGAAT+CGG | 0.451438 | 4.4:+25780450 | None:intergenic |
| CCGTGACTGTCTTAGTGGCT+GGG | 0.465306 | 4.4:-25775963 | MS.gene008760:CDS |
| ACTTTAGGACAAACCATGTC+AGG | 0.468461 | 4.4:+25777076 | None:intergenic |
| CTTGCCAACCATGGCTACTT+GGG | 0.468769 | 4.4:+25780594 | None:intergenic |
| ATTTGCACAATGGACGCGAT+TGG | 0.488319 | 4.4:-25779172 | MS.gene008760:CDS |
| TCTTTGGAAATCGGTAGCTA+TGG | 0.498667 | 4.4:+25780522 | None:intergenic |
| TACAGATGATAACAGTGCTT+GGG | 0.500678 | 4.4:+25775988 | None:intergenic |
| CAGCACTCCAACAGAAGTAA+AGG | 0.504233 | 4.4:-25775357 | MS.gene008760:CDS |
| TGAAGAACGTGATATGAAAC+CGG | 0.514373 | 4.4:-25780287 | MS.gene008760:CDS |
| CTGCTATGCAATACGAGAAA+CGG | 0.517535 | 4.4:-25780243 | MS.gene008760:intron |
| AACACCGAGTCTTCGATCGC+TGG | 0.522918 | 4.4:+25780555 | None:intergenic |
| CTACAGATGATAACAGTGCT+TGG | 0.527206 | 4.4:+25775987 | None:intergenic |
| ACTGCGTCCGAGTCTCTGTA+TGG | 0.530151 | 4.4:-25777121 | MS.gene008760:CDS |
| ATTCATGATAAACTCTTCAT+CGG | 0.530804 | 4.4:-25780490 | MS.gene008760:CDS |
| ACCAAACTAGCAAAAGTCTC+CGG | 0.563099 | 4.4:+25780268 | None:intergenic |
| CAAACCATTCATTTGCACAA+TGG | 0.566818 | 4.4:-25779182 | MS.gene008760:CDS |
| GTTTCTTATTCAGGAAGCTG+AGG | 0.568571 | 4.4:-25776029 | MS.gene008760:intron |
| GAGTCTTCGATCGCTGGCAA+TGG | 0.571455 | 4.4:+25780561 | None:intergenic |
| TGATAACAGTGCTTGGGAGA+TGG | 0.572635 | 4.4:+25775994 | None:intergenic |
| CGTGACTGTCTTAGTGGCTG+GGG | 0.572971 | 4.4:-25775962 | MS.gene008760:CDS |
| GACTGTCTTAGTGGCTGGGG+TGG | 0.577441 | 4.4:-25775959 | MS.gene008760:CDS |
| GCCTGTAATTGCTGGATTAG+GGG | 0.580864 | 4.4:-25779212 | MS.gene008760:CDS |
| CGGAAGTGCCCAAGTAGCCA+TGG | 0.591700 | 4.4:-25780602 | MS.gene008760:CDS |
| TTACAGTGTTTGAGAATCGG+TGG | 0.592428 | 4.4:+25780453 | None:intergenic |
| ATTGCCAGCGATCGAAGACT+CGG | 0.602697 | 4.4:-25780559 | MS.gene008760:CDS |
| CTAATCCAGCAATTACAGGC+TGG | 0.603284 | 4.4:+25779215 | None:intergenic |
| ATCGATGTTTAAGCCTGACA+TGG | 0.603428 | 4.4:-25777089 | MS.gene008760:intron |
| CTCCAACAGAAGTAAAGGAA+AGG | 0.604008 | 4.4:-25775352 | MS.gene008760:CDS |
| AGTGCCCAAGTAGCCATGGT+TGG | 0.621981 | 4.4:-25780598 | MS.gene008760:CDS |
| GAAGCAATTCTTGCCAACCA+TGG | 0.643972 | 4.4:+25780585 | None:intergenic |
| ACAAGCACCATACAGAGACT+CGG | 0.663819 | 4.4:+25777114 | None:intergenic |
| CCCAGCCACTAAGACAGTCA+CGG | 0.679067 | 4.4:+25775963 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTATTTTTATTAATT+AGG | - | chr4.4:25780368-25780387 | MS.gene008760:intron | 0.0% |
| !! | ATAAAAAATATTAATGTGTA+TGG | - | chr4.4:25780272-25780291 | MS.gene008760:CDS | 10.0% |
| !! | ATGTTTAAGTATATTATTTA+AGG | + | chr4.4:25777016-25777035 | None:intergenic | 10.0% |
| !! | ATTTACATTATTATTAATCA+AGG | + | chr4.4:25780506-25780525 | None:intergenic | 10.0% |
| !!! | CAAGTTTTTAAAAATTAAAT+TGG | - | chr4.4:25780466-25780485 | MS.gene008760:CDS | 10.0% |
| !!! | GTTAATTTAAAATAGTTATT+GGG | - | chr4.4:25779663-25779682 | MS.gene008760:intron | 10.0% |
| !!! | TTATTTTTATTAATTAGGAT+TGG | - | chr4.4:25780373-25780392 | MS.gene008760:intron | 10.0% |
| !! | AGTATAATGTTTAAGTATTA+TGG | + | chr4.4:25777051-25777070 | None:intergenic | 15.0% |
| !! | TTTCGATATTTATAACTTTA+AGG | + | chr4.4:25776868-25776887 | None:intergenic | 15.0% |
| !!! | GGTTAATTTAAAATAGTTAT+TGG | - | chr4.4:25779662-25779681 | MS.gene008760:intron | 15.0% |
| !!! | GTATTTTTTTTTTAGCATTA+TGG | + | chr4.4:25777080-25777099 | None:intergenic | 15.0% |
| !!! | TAGATTATTCTAAAAATTGA+GGG | + | chr4.4:25778572-25778591 | None:intergenic | 15.0% |
| !!! | TTAATTGTTAGATTTGTTTA+GGG | + | chr4.4:25777348-25777367 | None:intergenic | 15.0% |
| !!! | TTAGATTATTCTAAAAATTG+AGG | + | chr4.4:25778573-25778592 | None:intergenic | 15.0% |
| !!! | TTTTCATTGTATATTAGTTT+TGG | - | chr4.4:25775977-25775996 | MS.gene008760:CDS | 15.0% |
| !!! | TTTTTTTTTTTTGTGATTGA+AGG | - | chr4.4:25775602-25775621 | MS.gene008760:intron | 15.0% |
| !! | AAAATAAAAAATCCACAAAG+TGG | - | chr4.4:25777316-25777335 | MS.gene008760:intron | 20.0% |
| !! | AAGGAAAAATTACATAAAAC+TGG | - | chr4.4:25777243-25777262 | MS.gene008760:intron | 20.0% |
| !! | AGGAAAAATTACATAAAACT+GGG | - | chr4.4:25777244-25777263 | MS.gene008760:intron | 20.0% |
| !! | TATACAATGAAAATTATCGT+CGG | + | chr4.4:25775970-25775989 | None:intergenic | 20.0% |
| !! | TCATAAATTTGATCTAATCT+TGG | + | chr4.4:25775854-25775873 | None:intergenic | 20.0% |
| !! | TTTAAATTTCAACAAGTTAC+TGG | + | chr4.4:25776538-25776557 | None:intergenic | 20.0% |
| !!! | AAAAAAAAGTACGTTGTTTA+AGG | + | chr4.4:25777110-25777129 | None:intergenic | 20.0% |
| !!! | AGAATAACATGTCATTTATT+TGG | + | chr4.4:25779361-25779380 | None:intergenic | 20.0% |
| !!! | AGATTATTCTAAAAATTGAG+GGG | + | chr4.4:25778571-25778590 | None:intergenic | 20.0% |
| !!! | AGTACATTTTAGTTCAATTA+AGG | - | chr4.4:25776268-25776287 | MS.gene008760:intron | 20.0% |
| !!! | ATATTAGTTTTGGAAGTAAA+GGG | - | chr4.4:25775987-25776006 | MS.gene008760:CDS | 20.0% |
| !!! | ATCATATTTTTGATCTCTTA+AGG | - | chr4.4:25780443-25780462 | MS.gene008760:intron | 20.0% |
| !!! | CATTATTTTTCAAAGCTTAA+CGG | + | chr4.4:25778238-25778257 | None:intergenic | 20.0% |
| !!! | CTTAATTGTTAGATTTGTTT+AGG | + | chr4.4:25777349-25777368 | None:intergenic | 20.0% |
| !!! | GGAATAATATTTTGCATAAA+AGG | + | chr4.4:25778550-25778569 | None:intergenic | 20.0% |
| !!! | GTAAATCTCTTCTTTAATTT+AGG | + | chr4.4:25777803-25777822 | None:intergenic | 20.0% |
| !!! | TATATTAGTTTTGGAAGTAA+AGG | - | chr4.4:25775986-25776005 | MS.gene008760:CDS | 20.0% |
| !!! | TTCTTTAGTTGTTTGTTATT+GGG | - | chr4.4:25780053-25780072 | MS.gene008760:intron | 20.0% |
| !!! | TTTTAATGTCATTTTACTCT+TGG | + | chr4.4:25777145-25777164 | None:intergenic | 20.0% |
| ! | AAAATTTATGCAAAGAAGGA+AGG | + | chr4.4:25778053-25778072 | None:intergenic | 25.0% |
| ! | ATGTAAAGTAAACAACCAAA+AGG | + | chr4.4:25776584-25776603 | None:intergenic | 25.0% |
| ! | ATTCATGATAAACTCTTCAT+CGG | - | chr4.4:25775463-25775482 | MS.gene008760:intron | 25.0% |
| ! | CAGAAAAATTTATGCAAAGA+AGG | + | chr4.4:25778057-25778076 | None:intergenic | 25.0% |
| ! | CCTTTGATCTGAAAATATTT+GGG | - | chr4.4:25778502-25778521 | MS.gene008760:intron | 25.0% |
| ! | CTACTGTTCATATATTATCT+TGG | - | chr4.4:25776825-25776844 | MS.gene008760:intron | 25.0% |
| ! | GAAAAATTACATAAAACTGG+GGG | - | chr4.4:25777246-25777265 | MS.gene008760:intron | 25.0% |
| ! | GAAATTGTTATGATGTAATC+AGG | + | chr4.4:25776608-25776627 | None:intergenic | 25.0% |
| ! | GACAAAACAAGTTAAACTTT+AGG | + | chr4.4:25778895-25778914 | None:intergenic | 25.0% |
| ! | GGAAAAATTACATAAAACTG+GGG | - | chr4.4:25777245-25777264 | MS.gene008760:intron | 25.0% |
| ! | GTCATTTATTTGGAAATCTT+GGG | + | chr4.4:25779351-25779370 | None:intergenic | 25.0% |
| ! | TATAAACTACACATCTCAAA+CGG | + | chr4.4:25778146-25778165 | None:intergenic | 25.0% |
| ! | TCCTTTGATCTGAAAATATT+TGG | - | chr4.4:25778501-25778520 | MS.gene008760:intron | 25.0% |
| ! | TTCATATATTATCTTGGAGT+GGG | - | chr4.4:25776831-25776850 | MS.gene008760:intron | 25.0% |
| !! | AACCTAAACTTTTATCATAG+TGG | - | chr4.4:25780545-25780564 | MS.gene008760:CDS | 25.0% |
| !! | ATCTAAATCAGTGTTATTGA+TGG | - | chr4.4:25778587-25778606 | MS.gene008760:intron | 25.0% |
| !! | GAAGAGTTTATCATGAATTT+TGG | + | chr4.4:25775461-25775480 | None:intergenic | 25.0% |
| !! | TATGCTTTCCTTTTCTTTTT+AGG | - | chr4.4:25776698-25776717 | MS.gene008760:intron | 25.0% |
| !! | TGATTTGTGAATATTACAGA+TGG | - | chr4.4:25775827-25775846 | MS.gene008760:intron | 25.0% |
| !! | TGGATTGTATCTTCATTTTA+TGG | - | chr4.4:25779158-25779177 | MS.gene008760:intron | 25.0% |
| !! | TGTCATTTATTTGGAAATCT+TGG | + | chr4.4:25779352-25779371 | None:intergenic | 25.0% |
| !! | TTTGGAAATTCTTTGGAAAT+CGG | + | chr4.4:25775443-25775462 | None:intergenic | 25.0% |
| !!! | ACATTTTAGTTCAATTAAGG+AGG | - | chr4.4:25776271-25776290 | MS.gene008760:intron | 25.0% |
| !!! | CATGAATTTTGGAAATTCTT+TGG | + | chr4.4:25775450-25775469 | None:intergenic | 25.0% |
| !!! | CTTCTTTAGTTGTTTGTTAT+TGG | - | chr4.4:25780052-25780071 | MS.gene008760:intron | 25.0% |
| !!! | GTAGAGAAATTTGTTATACA+TGG | + | chr4.4:25779069-25779088 | None:intergenic | 25.0% |
| !!! | GTTTACGCTTCATATTTTTT+TGG | - | chr4.4:25778267-25778286 | MS.gene008760:intron | 25.0% |
| !!! | TATTTTATTTTTGCCCGTTA+GGG | + | chr4.4:25777297-25777316 | None:intergenic | 25.0% |
| !!! | TCTTCATTTTATGGTTTTGA+TGG | - | chr4.4:25779167-25779186 | MS.gene008760:CDS | 25.0% |
| !!! | TCTTTAGTTGTTTGTTATTG+GGG | - | chr4.4:25780054-25780073 | MS.gene008760:intron | 25.0% |
| !!! | TGAATGATTTGGTTGAATTA+GGG | - | chr4.4:25775792-25775811 | MS.gene008760:intron | 25.0% |
| !!! | TTAACCTCGTTTTTAAATCT+TGG | - | chr4.4:25776139-25776158 | MS.gene008760:intron | 25.0% |
| !!! | TTATTTTATTTTTGCCCGTT+AGG | + | chr4.4:25777298-25777317 | None:intergenic | 25.0% |
| !!! | TTGAATGATTTGGTTGAATT+AGG | - | chr4.4:25775791-25775810 | MS.gene008760:intron | 25.0% |
| !!! | TTGTTTTTCTTCTTTTGCTT+AGG | - | chr4.4:25778009-25778028 | MS.gene008760:intron | 25.0% |
| !!! | TTTAGATCTCGATTTTGTTT+AGG | - | chr4.4:25775749-25775768 | MS.gene008760:intron | 25.0% |
| !!! | TTTCCTTTTCTTTTTAGGTT+CGG | - | chr4.4:25776703-25776722 | MS.gene008760:intron | 25.0% |
| AAGAAACATAGCATTTCAGA+GGG | + | chr4.4:25776561-25776580 | None:intergenic | 30.0% | |
| ACAAATCTAACAATTAAGCG+CGG | - | chr4.4:25777351-25777370 | MS.gene008760:intron | 30.0% | |
| ACACTACTCTAATATGTTGT+CGG | - | chr4.4:25777189-25777208 | MS.gene008760:intron | 30.0% | |
| AGCCACTATGATAAAAGTTT+AGG | + | chr4.4:25780550-25780569 | None:intergenic | 30.0% | |
| AGTCCAAAACCTTTATAATG+TGG | + | chr4.4:25776037-25776056 | None:intergenic | 30.0% | |
| ATCAAGCTAAGCTAAATCAT+GGG | + | chr4.4:25779842-25779861 | None:intergenic | 30.0% | |
| CATCCTTAACAAATTAGACA+TGG | - | chr4.4:25778659-25778678 | MS.gene008760:intron | 30.0% | |
| GTAAAACAGAACTAGACATA+AGG | - | chr4.4:25776236-25776255 | MS.gene008760:intron | 30.0% | |
| GTGATGTGAATTGAATGATT+TGG | - | chr4.4:25775781-25775800 | MS.gene008760:intron | 30.0% | |
| GTTCATATATTATCTTGGAG+TGG | - | chr4.4:25776830-25776849 | MS.gene008760:intron | 30.0% | |
| TAGTTACAGTGTTTGAGAAT+CGG | + | chr4.4:25775506-25775525 | None:intergenic | 30.0% | |
| TATCAAGCTAAGCTAAATCA+TGG | + | chr4.4:25779843-25779862 | None:intergenic | 30.0% | |
| TATTCCTCATGACACTTTAT+TGG | - | chr4.4:25777903-25777922 | MS.gene008760:intron | 30.0% | |
| ! | AAAATCATAAGCTTCCCTTT+TGG | + | chr4.4:25779896-25779915 | None:intergenic | 30.0% |
| ! | AAGCTTATGATTTTTGTGCT+TGG | - | chr4.4:25779902-25779921 | MS.gene008760:intron | 30.0% |
| ! | AATGCTATGTTTCTTCCTTT+TGG | - | chr4.4:25776566-25776585 | MS.gene008760:intron | 30.0% |
| ! | ACCTCTTCCTATTTAGTTTA+GGG | + | chr4.4:25777840-25777859 | None:intergenic | 30.0% |
| ! | AGTAAAGGAAAGGATTTTGA+AGG | - | chr4.4:25780611-25780630 | MS.gene008760:CDS | 30.0% |
| ! | CAACCACATTATAAAGGTTT+TGG | - | chr4.4:25776031-25776050 | MS.gene008760:intron | 30.0% |
| ! | CCCAAATATTTTCAGATCAA+AGG | + | chr4.4:25778505-25778524 | None:intergenic | 30.0% |
| ! | CTTTTATCATAGTGGCTTAT+TGG | - | chr4.4:25780553-25780572 | MS.gene008760:CDS | 30.0% |
| ! | GGCAGAAAAATAGTACATTT+TGG | - | chr4.4:25776257-25776276 | MS.gene008760:intron | 30.0% |
| ! | GTAAAGGAAAGGATTTTGAA+GGG | - | chr4.4:25780612-25780631 | MS.gene008760:CDS | 30.0% |
| ! | TAAATCAGTGTTATTGATGG+CGG | - | chr4.4:25778590-25778609 | MS.gene008760:intron | 30.0% |
| ! | TAAGAAGCATGTAGTGTTAA+AGG | + | chr4.4:25779028-25779047 | None:intergenic | 30.0% |
| ! | TCTGAATCGTTTTCTGTTTT+GGG | - | chr4.4:25775549-25775568 | MS.gene008760:intron | 30.0% |
| ! | TTCTGAATCGTTTTCTGTTT+TGG | - | chr4.4:25775548-25775567 | MS.gene008760:intron | 30.0% |
| ! | TTCTTTAATTTAGGCGATTG+AGG | + | chr4.4:25777794-25777813 | None:intergenic | 30.0% |
| ! | TTGTTAGATTTGTTTAGGGT+TGG | + | chr4.4:25777344-25777363 | None:intergenic | 30.0% |
| !! | CATGTCTAATTTGTTAAGGA+TGG | + | chr4.4:25778661-25778680 | None:intergenic | 30.0% |
| !! | TATTTTTCAAAGCTTAACGG+AGG | + | chr4.4:25778235-25778254 | None:intergenic | 30.0% |
| !! | TGTCTGTTTTTCACTTGTTT+TGG | - | chr4.4:25778960-25778979 | MS.gene008760:intron | 30.0% |
| !! | TTATTCTGCTTTTACTGTTC+AGG | - | chr4.4:25779374-25779393 | MS.gene008760:intron | 30.0% |
| !!! | GTACATTTTGGTTCCAATTA+AGG | - | chr4.4:25776333-25776352 | MS.gene008760:intron | 30.0% |
| !!! | TTTTAGTTCAATTAAGGAGG+TGG | - | chr4.4:25776274-25776293 | MS.gene008760:intron | 30.0% |
| AACAAATTTCTCTACACCCT+TGG | - | chr4.4:25779074-25779093 | MS.gene008760:intron | 35.0% | |
| AAGAGTTTGAGCTACATTCT+AGG | - | chr4.4:25779567-25779586 | MS.gene008760:intron | 35.0% | |
| AAGTGTCATGAGGAATATCA+TGG | + | chr4.4:25777900-25777919 | None:intergenic | 35.0% | |
| ACCACATTGAAAATTGTCGA+GGG | - | chr4.4:25779274-25779293 | MS.gene008760:intron | 35.0% | |
| ACTACAAATCTCAACCACTA+AGG | - | chr4.4:25779501-25779520 | MS.gene008760:intron | 35.0% | |
| AGAATAGTGTCCAACTAAGT+TGG | - | chr4.4:25777165-25777184 | MS.gene008760:intron | 35.0% | |
| AGAGTTTGAGCTACATTCTA+GGG | - | chr4.4:25779568-25779587 | MS.gene008760:intron | 35.0% | |
| AGGTTGCAACCACATTATAA+AGG | - | chr4.4:25776025-25776044 | MS.gene008760:intron | 35.0% | |
| ATATATTATCTTGGAGTGGG+AGG | - | chr4.4:25776834-25776853 | MS.gene008760:intron | 35.0% | |
| ATCCTTTCCTTTACTTCTGT+TGG | + | chr4.4:25780606-25780625 | None:intergenic | 35.0% | |
| ATCGATCGTCAACACAAAAT+CGG | - | chr4.4:25777394-25777413 | MS.gene008760:intron | 35.0% | |
| ATTGAAAATTGTCGAGGGAA+AGG | - | chr4.4:25779279-25779298 | MS.gene008760:intron | 35.0% | |
| CAAACCATTCATTTGCACAA+TGG | - | chr4.4:25776771-25776790 | MS.gene008760:intron | 35.0% | |
| CAAATCTAACAATTAAGCGC+GGG | - | chr4.4:25777352-25777371 | MS.gene008760:intron | 35.0% | |
| CAGATCAAAGGATTAACATG+AGG | + | chr4.4:25778493-25778512 | None:intergenic | 35.0% | |
| CATCACACCAAGTTCTATTA+GGG | + | chr4.4:25775947-25775966 | None:intergenic | 35.0% | |
| CCTTAACAAATTAGACATGG+TGG | - | chr4.4:25778662-25778681 | MS.gene008760:intron | 35.0% | |
| GAAATTAAACCAGCACCATA+GGG | + | chr4.4:25779325-25779344 | None:intergenic | 35.0% | |
| GAAGAAACATAGCATTTCAG+AGG | + | chr4.4:25776562-25776581 | None:intergenic | 35.0% | |
| GAAGATCCCCTAAACTAAAT+AGG | - | chr4.4:25777830-25777849 | MS.gene008760:intron | 35.0% | |
| TAAACTGCTCGAATGAGATA+GGG | + | chr4.4:25779548-25779567 | None:intergenic | 35.0% | |
| TACAGATGATAACAGTGCTT+GGG | + | chr4.4:25779968-25779987 | None:intergenic | 35.0% | |
| TCAAGCTAAGCTAAATCATG+GGG | + | chr4.4:25779841-25779860 | None:intergenic | 35.0% | |
| TCCTCGTTATATGATCTTAC+AGG | + | chr4.4:25779195-25779214 | None:intergenic | 35.0% | |
| TGAAGAACGTGATATGAAAC+CGG | - | chr4.4:25775666-25775685 | MS.gene008760:intron | 35.0% | |
| TTAAACTGCTCGAATGAGAT+AGG | + | chr4.4:25779549-25779568 | None:intergenic | 35.0% | |
| TTCGCCAAGATTTAAAAACG+AGG | + | chr4.4:25776146-25776165 | None:intergenic | 35.0% | |
| TTGAAGAAACAACCGCAAAA+TGG | + | chr4.4:25779793-25779812 | None:intergenic | 35.0% | |
| TTGTGCTTGGTTTCTTATTC+AGG | - | chr4.4:25779915-25779934 | MS.gene008760:intron | 35.0% | |
| TTTATTTGGAAATCTTGGGC+TGG | + | chr4.4:25779347-25779366 | None:intergenic | 35.0% | |
| TTTCTCCATGTTTGCCAAAA+GGG | - | chr4.4:25779879-25779898 | MS.gene008760:intron | 35.0% | |
| ! | AAATGATTTTCCACATGCCA+AGG | + | chr4.4:25780187-25780206 | None:intergenic | 35.0% |
| ! | AAGAGGTGTACTTCACAAAA+AGG | - | chr4.4:25777853-25777872 | MS.gene008760:intron | 35.0% |
| ! | AGAGGTGTACTTCACAAAAA+GGG | - | chr4.4:25777854-25777873 | MS.gene008760:intron | 35.0% |
| ! | CACCTCTTCCTATTTAGTTT+AGG | + | chr4.4:25777841-25777860 | None:intergenic | 35.0% |
| ! | CCTCTTCCTATTTAGTTTAG+GGG | + | chr4.4:25777839-25777858 | None:intergenic | 35.0% |
| ! | GCGGCTTTATCTACAATTTA+AGG | - | chr4.4:25776085-25776104 | MS.gene008760:intron | 35.0% |
| ! | GGAATCTGAGATTCAAATAG+AGG | - | chr4.4:25779756-25779775 | MS.gene008760:intron | 35.0% |
| ! | TCTTCTTTTGCTTAGGAGAT+GGG | - | chr4.4:25778016-25778035 | MS.gene008760:intron | 35.0% |
| ! | TTCTTCTTTTGCTTAGGAGA+TGG | - | chr4.4:25778015-25778034 | MS.gene008760:intron | 35.0% |
| !! | AAGGATTTTGAAGGGAAGAA+TGG | - | chr4.4:25780620-25780639 | MS.gene008760:CDS | 35.0% |
| !! | CCACCATGTCTAATTTGTTA+AGG | + | chr4.4:25778665-25778684 | None:intergenic | 35.0% |
| !! | CTGTTGGTGGCAAATATATT+GGG | - | chr4.4:25777750-25777769 | MS.gene008760:intron | 35.0% |
| !! | GTCTAATTTGTTAAGGATGG+CGG | + | chr4.4:25778658-25778677 | None:intergenic | 35.0% |
| !!! | AGTTTTGGAAGTAAAGGGAT+TGG | - | chr4.4:25775992-25776011 | MS.gene008760:CDS | 35.0% |
| !!! | CATTTTGGTTCCAATTAAGG+AGG | - | chr4.4:25776336-25776355 | MS.gene008760:intron | 35.0% |
| !!! | CCAAGTTGCTATTTTAACTG+CGG | - | chr4.4:25776066-25776085 | MS.gene008760:intron | 35.0% |
| !!! | GGTCATTTTTTTTGCTTGCT+TGG | + | chr4.4:25778437-25778456 | None:intergenic | 35.0% |
| !!! | GTTTTGGAAGTAAAGGGATT+GGG | - | chr4.4:25775993-25776012 | MS.gene008760:CDS | 35.0% |
| AAACTCTTCATCGGTCTTTC+TGG | - | chr4.4:25775472-25775491 | MS.gene008760:intron | 40.0% | |
| AAATAGCAACTTGGTTGCAG+AGG | + | chr4.4:25776060-25776079 | None:intergenic | 40.0% | |
| AACAGAGCTTCGAATAGTTG+TGG | - | chr4.4:25777703-25777722 | MS.gene008760:intron | 40.0% | |
| AAGATCATATAACGAGGAGC+TGG | - | chr4.4:25779197-25779216 | MS.gene008760:CDS | 40.0% | |
| AAGTGCATCAGGGTAGTATA+TGG | - | chr4.4:25776164-25776183 | MS.gene008760:intron | 40.0% | |
| ACAGAGCTTCGAATAGTTGT+GGG | - | chr4.4:25777704-25777723 | MS.gene008760:intron | 40.0% | |
| ACCAAACTAGCAAAAGTCTC+CGG | + | chr4.4:25775688-25775707 | None:intergenic | 40.0% | |
| ACCTCCAAAACACCAAAACT+TGG | - | chr4.4:25777573-25777592 | MS.gene008760:intron | 40.0% | |
| AGCCTGTAATTGCTGGATTA+GGG | - | chr4.4:25776740-25776759 | MS.gene008760:intron | 40.0% | |
| AGTTCATCTTACAAGCCACT+AGG | - | chr4.4:25780143-25780162 | MS.gene008760:intron | 40.0% | |
| ATAAATGTGTGTGTGTGTGG+TGG | + | chr4.4:25778469-25778488 | None:intergenic | 40.0% | |
| ATCGATGTTTAAGCCTGACA+TGG | - | chr4.4:25778864-25778883 | MS.gene008760:intron | 40.0% | |
| ATTACAGGCTGGCAAAAGTA+TGG | + | chr4.4:25776730-25776749 | None:intergenic | 40.0% | |
| CACCACATTGAAAATTGTCG+AGG | - | chr4.4:25779273-25779292 | MS.gene008760:intron | 40.0% | |
| CCAATATATTTGCCACCAAC+AGG | + | chr4.4:25777752-25777771 | None:intergenic | 40.0% | |
| CCCCTAAACTAAATAGGAAG+AGG | - | chr4.4:25777836-25777855 | MS.gene008760:intron | 40.0% | |
| CCGCAGTTAAAATAGCAACT+TGG | + | chr4.4:25776069-25776088 | None:intergenic | 40.0% | |
| CGATACACTACACAGTTGTT+TGG | + | chr4.4:25776439-25776458 | None:intergenic | 40.0% | |
| CTACAGATGATAACAGTGCT+TGG | + | chr4.4:25779969-25779988 | None:intergenic | 40.0% | |
| CTCCAACAGAAGTAAAGGAA+AGG | - | chr4.4:25780601-25780620 | MS.gene008760:CDS | 40.0% | |
| CTGCTATGCAATACGAGAAA+CGG | - | chr4.4:25775710-25775729 | MS.gene008760:intron | 40.0% | |
| CTTCCTATAGAACTTGCATG+TGG | + | chr4.4:25779594-25779613 | None:intergenic | 40.0% | |
| GACACAACCCTAATAGAACT+TGG | - | chr4.4:25775937-25775956 | MS.gene008760:intron | 40.0% | |
| GAGGTGTACTTCACAAAAAG+GGG | - | chr4.4:25777855-25777874 | MS.gene008760:intron | 40.0% | |
| GAGTAGTGTTCCAACTTAGT+TGG | + | chr4.4:25777178-25777197 | None:intergenic | 40.0% | |
| GCAACAAGCAGAAAAGATCA+AGG | - | chr4.4:25779641-25779660 | MS.gene008760:intron | 40.0% | |
| GCATCACACCAAGTTCTATT+AGG | + | chr4.4:25775948-25775967 | None:intergenic | 40.0% | |
| GCCTGTAAGATCATATAACG+AGG | - | chr4.4:25779191-25779210 | MS.gene008760:CDS | 40.0% | |
| GCTGCAGCAAACAAAATTTG+AGG | + | chr4.4:25780580-25780599 | None:intergenic | 40.0% | |
| GGAAATTAAACCAGCACCAT+AGG | + | chr4.4:25779326-25779345 | None:intergenic | 40.0% | |
| GGACCGAACCTAAAAAGAAA+AGG | + | chr4.4:25776709-25776728 | None:intergenic | 40.0% | |
| GGCAATATTAAGAGTTGCTG+CGG | - | chr4.4:25776106-25776125 | MS.gene008760:intron | 40.0% | |
| GGTATAAATGTGTGTGTGTG+TGG | + | chr4.4:25778472-25778491 | None:intergenic | 40.0% | |
| GTGCTATCTCAATAACAGCT+TGG | + | chr4.4:25778195-25778214 | None:intergenic | 40.0% | |
| GTGGGGGATATTTCTTAAAC+AGG | - | chr4.4:25779440-25779459 | MS.gene008760:intron | 40.0% | |
| GTTTCTCCATGTTTGCCAAA+AGG | - | chr4.4:25779878-25779897 | MS.gene008760:intron | 40.0% | |
| GTTTCTTATTCAGGAAGCTG+AGG | - | chr4.4:25779924-25779943 | MS.gene008760:intron | 40.0% | |
| TAAATGTGTGTGTGTGTGGT+GGG | + | chr4.4:25778468-25778487 | None:intergenic | 40.0% | |
| TCATGAGGAATATCATGGTC+AGG | + | chr4.4:25777895-25777914 | None:intergenic | 40.0% | |
| TGAGGTGGTTTCCAAGAAAT+CGG | - | chr4.4:25779129-25779148 | MS.gene008760:intron | 40.0% | |
| TGGAAGTGAGACGTTCTTTA+GGG | - | chr4.4:25779728-25779747 | MS.gene008760:intron | 40.0% | |
| TTACAGTGTTTGAGAATCGG+TGG | + | chr4.4:25775503-25775522 | None:intergenic | 40.0% | |
| TTCCAATTAAGGAGGTGGAA+TGG | - | chr4.4:25776344-25776363 | MS.gene008760:intron | 40.0% | |
| TTCCATTCCACCTCCTTAAT+TGG | + | chr4.4:25776349-25776368 | None:intergenic | 40.0% | |
| ! | AAGGGATTGGGTTGTTAGTT+AGG | - | chr4.4:25776005-25776024 | MS.gene008760:CDS | 40.0% |
| ! | ACTGTGTAGTGTATCGACAT+TGG | - | chr4.4:25776443-25776462 | MS.gene008760:intron | 40.0% |
| ! | CTCGACAATTTTCAATGTGG+TGG | + | chr4.4:25779275-25779294 | None:intergenic | 40.0% |
| ! | GCGGCTTGAAATGACATTTT+TGG | + | chr4.4:25778620-25778639 | None:intergenic | 40.0% |
| ! | TCCCTCGACAATTTTCAATG+TGG | + | chr4.4:25779278-25779297 | None:intergenic | 40.0% |
| ! | TCTTTGGAAATCGGTAGCTA+TGG | + | chr4.4:25775434-25775453 | None:intergenic | 40.0% |
| ! | TTTGGTTCCAATTAAGGAGG+TGG | - | chr4.4:25776339-25776358 | MS.gene008760:intron | 40.0% |
| !! | ACTTTAGGACAAACCATGTC+AGG | + | chr4.4:25778880-25778899 | None:intergenic | 40.0% |
| !! | CCTGTTGGTGGCAAATATAT+TGG | - | chr4.4:25777749-25777768 | MS.gene008760:intron | 40.0% |
| !! | GAGACGTTCTTTAGGGTAAA+GGG | - | chr4.4:25779735-25779754 | MS.gene008760:intron | 40.0% |
| !! | TGAGACGTTCTTTAGGGTAA+AGG | - | chr4.4:25779734-25779753 | MS.gene008760:intron | 40.0% |
| !!! | GGTTCCAAGTTTTGGTGTTT+TGG | + | chr4.4:25777580-25777599 | None:intergenic | 40.0% |
| !!! | TCCAAGTTTTGGTGTTTTGG+AGG | + | chr4.4:25777577-25777596 | None:intergenic | 40.0% |
| !!! | TCGTCGATTTTGGACTACAA+CGG | - | chr4.4:25775331-25775350 | MS.gene008760:CDS | 40.0% |
| AAAGCTGTCCTTTGTCGTTG+GGG | + | chr4.4:25777978-25777997 | None:intergenic | 45.0% | |
| AAATCTTGGCGAAGTGCATC+AGG | - | chr4.4:25776153-25776172 | MS.gene008760:intron | 45.0% | |
| AAGTCGTTTGTCCAACCTAG+TGG | + | chr4.4:25780161-25780180 | None:intergenic | 45.0% | |
| AATCTTGGCGAAGTGCATCA+GGG | - | chr4.4:25776154-25776173 | MS.gene008760:intron | 45.0% | |
| ACAACCGCAAAATGGTCGAA+TGG | + | chr4.4:25779785-25779804 | None:intergenic | 45.0% | |
| ACAAGCACCATACAGAGACT+CGG | + | chr4.4:25778842-25778861 | None:intergenic | 45.0% | |
| AGGTGGTTTCCAAGAAATCG+GGG | - | chr4.4:25779131-25779150 | MS.gene008760:intron | 45.0% | |
| ATCAAGCCTTCATCATGAGG+TGG | - | chr4.4:25779114-25779133 | MS.gene008760:intron | 45.0% | |
| ATCCAGAATCCCCGATTTCT+TGG | + | chr4.4:25779143-25779162 | None:intergenic | 45.0% | |
| ATGAGGATTTGATGCAGGTG+TGG | - | chr4.4:25779421-25779440 | MS.gene008760:intron | 45.0% | |
| ATGGTCAGGAGCAAAGTCAT+TGG | + | chr4.4:25777881-25777900 | None:intergenic | 45.0% | |
| ATTTGCACAATGGACGCGAT+TGG | - | chr4.4:25776781-25776800 | MS.gene008760:intron | 45.0% | |
| CAAAGCTGTCCTTTGTCGTT+GGG | + | chr4.4:25777979-25777998 | None:intergenic | 45.0% | |
| CAAGCATGAGGATTTGATGC+AGG | - | chr4.4:25779416-25779435 | MS.gene008760:intron | 45.0% | |
| CAGCACTCCAACAGAAGTAA+AGG | - | chr4.4:25780596-25780615 | MS.gene008760:CDS | 45.0% | |
| CAGCCTGTAATTGCTGGATT+AGG | - | chr4.4:25776739-25776758 | MS.gene008760:intron | 45.0% | |
| CATCTTACAAGCCACTAGGT+TGG | - | chr4.4:25780147-25780166 | MS.gene008760:intron | 45.0% | |
| CTAATCCAGCAATTACAGGC+TGG | + | chr4.4:25776741-25776760 | None:intergenic | 45.0% | |
| CTGCATCAAATCCTCATGCT+TGG | + | chr4.4:25779418-25779437 | None:intergenic | 45.0% | |
| GAAGCAATTCTTGCCAACCA+TGG | + | chr4.4:25775371-25775390 | None:intergenic | 45.0% | |
| GAGGTGGTTTCCAAGAAATC+GGG | - | chr4.4:25779130-25779149 | MS.gene008760:intron | 45.0% | |
| GCAAAAGACTTCGTTGTTGC+TGG | - | chr4.4:25778808-25778827 | MS.gene008760:intron | 45.0% | |
| GCATCAGGGTAGTATATGGT+AGG | - | chr4.4:25776168-25776187 | MS.gene008760:intron | 45.0% | |
| GCGTCCATTGTGCAAATGAA+TGG | + | chr4.4:25776778-25776797 | None:intergenic | 45.0% | |
| GTGGAAGTGAGACGTTCTTT+AGG | - | chr4.4:25779727-25779746 | MS.gene008760:intron | 45.0% | |
| GTTGTCAAAGATCAGTGCCA+TGG | + | chr4.4:25778702-25778721 | None:intergenic | 45.0% | |
| TAGGCGATTGAGGTGAGAAA+TGG | + | chr4.4:25777784-25777803 | None:intergenic | 45.0% | |
| TATAACGAGGAGCTGGTTGT+AGG | - | chr4.4:25779204-25779223 | MS.gene008760:CDS | 45.0% | |
| TATCGACATTGGCGCATTTG+AGG | - | chr4.4:25776454-25776473 | MS.gene008760:intron | 45.0% | |
| TCCCCTAATCCAGCAATTAC+AGG | + | chr4.4:25776745-25776764 | None:intergenic | 45.0% | |
| TCGAAAACACCAAAACTCGC+CGG | - | chr4.4:25777545-25777564 | MS.gene008760:intron | 45.0% | |
| TCTACACCCTTGGTATCTGT+GGG | - | chr4.4:25779084-25779103 | MS.gene008760:intron | 45.0% | |
| TGAGGATTTGATGCAGGTGT+GGG | - | chr4.4:25779422-25779441 | MS.gene008760:intron | 45.0% | |
| TGATAACAGTGCTTGGGAGA+TGG | + | chr4.4:25779962-25779981 | None:intergenic | 45.0% | |
| TGGAAACCACCTCATGATGA+AGG | + | chr4.4:25779123-25779142 | None:intergenic | 45.0% | |
| TTAGGGTTGGATCCACTTTG+TGG | + | chr4.4:25777331-25777350 | None:intergenic | 45.0% | |
| TTCCAAGAAATCGGGGATTC+TGG | - | chr4.4:25779138-25779157 | MS.gene008760:intron | 45.0% | |
| ! | ACCGGAGACTTTTGCTAGTT+TGG | - | chr4.4:25775684-25775703 | MS.gene008760:intron | 45.0% |
| ! | AGCGCCAATAAAGTGTCATG+AGG | + | chr4.4:25777910-25777929 | None:intergenic | 45.0% |
| ! | AGCTTCCCTTTTGGCAAACA+TGG | + | chr4.4:25779887-25779906 | None:intergenic | 45.0% |
| ! | ATGGCGGCATCACAGTTTTA+CGG | + | chr4.4:25778642-25778661 | None:intergenic | 45.0% |
| ! | CGATAGCAGGTTCCAAGTTT+TGG | + | chr4.4:25777588-25777607 | None:intergenic | 45.0% |
| ! | GAAGCCATTCGACCATTTTG+CGG | - | chr4.4:25779778-25779797 | MS.gene008760:intron | 45.0% |
| ! | GCCTGTAATTGCTGGATTAG+GGG | - | chr4.4:25776741-25776760 | MS.gene008760:intron | 45.0% |
| ! | TGGACAAACGACTTTTGCCT+TGG | - | chr4.4:25780167-25780186 | MS.gene008760:intron | 45.0% |
| ! | TTTTGCCAGCCTGTAATTGC+TGG | - | chr4.4:25776733-25776752 | MS.gene008760:intron | 45.0% |
| !! | CTGCTTTTACTGTTCAGGCT+TGG | - | chr4.4:25779379-25779398 | MS.gene008760:intron | 45.0% |
| !! | TCTCACTTCCACTCTGAAGT+CGG | + | chr4.4:25779719-25779738 | None:intergenic | 45.0% |
| !! | TTGGGAAAAGGCTCTAGAAG+CGG | + | chr4.4:25777946-25777965 | None:intergenic | 45.0% |
| !!! | GGTGTTTTGGAGGTTGTTTC+CGG | + | chr4.4:25777567-25777586 | None:intergenic | 45.0% |
| !! | ATATTATTAAAAAAAAAAGA+AGG | - | chr4.4:25777224-25777243 | MS.gene008760:intron | 5.0% |
| !! | TTTATTAAAAAAAGAAATAA+TGG | - | chr4.4:25778098-25778117 | MS.gene008760:intron | 5.0% |
| ACATTGGCGCATTTGAGGAC+TGG | - | chr4.4:25776459-25776478 | MS.gene008760:intron | 50.0% | |
| ACCCAGTCAACAACCCTAAC+GGG | - | chr4.4:25777281-25777300 | MS.gene008760:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAAGG+AGG | + | chr4.4:25777490-25777509 | None:intergenic | 50.0% | |
| AGGATTTGATGCAGGTGTGG+GGG | - | chr4.4:25779424-25779443 | MS.gene008760:intron | 50.0% | |
| ATTGCCAGCGATCGAAGACT+CGG | - | chr4.4:25775394-25775413 | MS.gene008760:intron | 50.0% | |
| CAGGGTAGTATATGGTAGGC+TGG | - | chr4.4:25776172-25776191 | MS.gene008760:intron | 50.0% | |
| CCTTCACCCACAGATACCAA+GGG | + | chr4.4:25779093-25779112 | None:intergenic | 50.0% | |
| CGAAGCTCTGTTGTCAAACG+TGG | + | chr4.4:25777695-25777714 | None:intergenic | 50.0% | |
| CTCTACACCCTTGGTATCTG+TGG | - | chr4.4:25779083-25779102 | MS.gene008760:intron | 50.0% | |
| CTTCGTTCCAGGGCATATCT+CGG | - | chr4.4:25779472-25779491 | MS.gene008760:intron | 50.0% | |
| CTTGCCAACCATGGCTACTT+GGG | + | chr4.4:25775362-25775381 | None:intergenic | 50.0% | |
| GACCCAGTCAACAACCCTAA+CGG | - | chr4.4:25777280-25777299 | MS.gene008760:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+AGG | + | chr4.4:25777493-25777512 | None:intergenic | 50.0% | |
| GAGGATTTGATGCAGGTGTG+GGG | - | chr4.4:25779423-25779442 | MS.gene008760:intron | 50.0% | |
| GCAAAGCTGTCCTTTGTCGT+TGG | + | chr4.4:25777980-25777999 | None:intergenic | 50.0% | |
| GGCATCAAGCCTTCATCATG+AGG | - | chr4.4:25779111-25779130 | MS.gene008760:intron | 50.0% | |
| GGGCCACATGCAAGTTCTAT+AGG | - | chr4.4:25779588-25779607 | MS.gene008760:intron | 50.0% | |
| GGGCTCTGTGAATTGGGAAA+AGG | + | chr4.4:25777958-25777977 | None:intergenic | 50.0% | |
| GTAGACCGTGACTGTCTTAG+TGG | - | chr4.4:25779985-25780004 | MS.gene008760:intron | 50.0% | |
| GTCAAAGATCAGTGCCATGG+TGG | + | chr4.4:25778699-25778718 | None:intergenic | 50.0% | |
| TACTCACAGTCACAGCCTGT+TGG | - | chr4.4:25777734-25777753 | MS.gene008760:intron | 50.0% | |
| TATTGGCGCTTCGTTACCAG+TGG | - | chr4.4:25777920-25777939 | MS.gene008760:intron | 50.0% | |
| TCGTTGGGGCTCTGTGAATT+GGG | + | chr4.4:25777964-25777983 | None:intergenic | 50.0% | |
| TCTTGCCAACCATGGCTACT+TGG | + | chr4.4:25775363-25775382 | None:intergenic | 50.0% | |
| TGCAATGTCCGACTTCAGAG+TGG | - | chr4.4:25779708-25779727 | MS.gene008760:intron | 50.0% | |
| TGGTTGTCAATCTGCCACCA+TGG | - | chr4.4:25778682-25778701 | MS.gene008760:intron | 50.0% | |
| ! | ACGACTTTTGCCTTGGCATG+TGG | - | chr4.4:25780174-25780193 | MS.gene008760:intron | 50.0% |
| ! | GAAGAGCACACTTCGTTCCA+GGG | - | chr4.4:25779462-25779481 | MS.gene008760:intron | 50.0% |
| ! | GGTTGTTTCCAACGAGTTGC+AGG | + | chr4.4:25777525-25777544 | None:intergenic | 50.0% |
| !! | AGGTTGTTTCCGGCGAGTTT+TGG | + | chr4.4:25777557-25777576 | None:intergenic | 50.0% |
| !! | ATTGTCGAGGGAAAGGCACT+TGG | - | chr4.4:25779286-25779305 | MS.gene008760:intron | 50.0% |
| !! | GAGGGAAAGGCACTTGGTTA+TGG | - | chr4.4:25779292-25779311 | MS.gene008760:intron | 50.0% |
| !!! | GGCGAGTTTTGGTGTTTTCG+AGG | + | chr4.4:25777546-25777565 | None:intergenic | 50.0% |
| AAACCAGCACCATAGGGTGC+AGG | + | chr4.4:25779319-25779338 | None:intergenic | 55.0% | |
| AACACCGAGTCTTCGATCGC+TGG | + | chr4.4:25775401-25775420 | None:intergenic | 55.0% | |
| AACCCCTTCCATCCATGTGG+TGG | + | chr4.4:25779252-25779271 | None:intergenic | 55.0% | |
| ACCCCACCACATGGATGGAA+GGG | - | chr4.4:25779246-25779265 | MS.gene008760:intron | 55.0% | |
| ACCCCTTCCATCCATGTGGT+GGG | + | chr4.4:25779251-25779270 | None:intergenic | 55.0% | |
| ACCGTGACTGTCTTAGTGGC+TGG | - | chr4.4:25779989-25780008 | MS.gene008760:intron | 55.0% | |
| ACTGCGTCCGAGTCTCTGTA+TGG | - | chr4.4:25778832-25778851 | MS.gene008760:intron | 55.0% | |
| AGTGCCCAAGTAGCCATGGT+TGG | - | chr4.4:25775355-25775374 | MS.gene008760:CDS | 55.0% | |
| CATTCTCCAAATGCGCTGCG+CGG | - | chr4.4:25777618-25777637 | MS.gene008760:intron | 55.0% | |
| CCCAGCCACTAAGACAGTCA+CGG | + | chr4.4:25779993-25780012 | None:intergenic | 55.0% | |
| CCCTTGGTATCTGTGGGTGA+AGG | - | chr4.4:25779090-25779109 | MS.gene008760:intron | 55.0% | |
| CCGTGACTGTCTTAGTGGCT+GGG | - | chr4.4:25779990-25780009 | MS.gene008760:intron | 55.0% | |
| CGCAGCGCATTTGGAGAATG+CGG | + | chr4.4:25777618-25777637 | None:intergenic | 55.0% | |
| CGCATTTGGAGAATGCGGAG+CGG | + | chr4.4:25777613-25777632 | None:intergenic | 55.0% | |
| CGTGACTGTCTTAGTGGCTG+GGG | - | chr4.4:25779991-25780010 | MS.gene008760:intron | 55.0% | |
| CTCTCTCTCCTGCAACTCGT+TGG | - | chr4.4:25777514-25777533 | MS.gene008760:intron | 55.0% | |
| GAGAGAGAGAGAGAAGGAGG+AGG | + | chr4.4:25777487-25777506 | None:intergenic | 55.0% | |
| GAGTCTTCGATCGCTGGCAA+TGG | + | chr4.4:25775395-25775414 | None:intergenic | 55.0% | |
| GCATTTGGAGAATGCGGAGC+GGG | + | chr4.4:25777612-25777631 | None:intergenic | 55.0% | |
| GCCTTCACCCACAGATACCA+AGG | + | chr4.4:25779094-25779113 | None:intergenic | 55.0% | |
| GGTTATGGACCTGCACCCTA+TGG | - | chr4.4:25779307-25779326 | MS.gene008760:intron | 55.0% | |
| GTCGTTGGGGCTCTGTGAAT+TGG | + | chr4.4:25777965-25777984 | None:intergenic | 55.0% | |
| GTGCCATCAACTCCCTGCAA+CGG | - | chr4.4:25777422-25777441 | MS.gene008760:intron | 55.0% | |
| GTTCAGGCTTGGACACAAGC+TGG | - | chr4.4:25779390-25779409 | MS.gene008760:intron | 55.0% | |
| GTTCCAGGGCATATCTCGGT+GGG | - | chr4.4:25779476-25779495 | MS.gene008760:intron | 55.0% | |
| TCACAGAGCCCCAACGACAA+AGG | - | chr4.4:25777967-25777986 | MS.gene008760:intron | 55.0% | |
| TCACAGTCACAGCCTGTTGG+TGG | - | chr4.4:25777737-25777756 | MS.gene008760:intron | 55.0% | |
| TGCCCGTTAGGGTTGTTGAC+TGG | + | chr4.4:25777286-25777305 | None:intergenic | 55.0% | |
| TGGAACCCCTTCCATCCATG+TGG | + | chr4.4:25779255-25779274 | None:intergenic | 55.0% | |
| TTACCCACCGAGATATGCCC+TGG | + | chr4.4:25779482-25779501 | None:intergenic | 55.0% | |
| ! | ACAAGCTGGCTCCAAGCATG+AGG | - | chr4.4:25779404-25779423 | MS.gene008760:intron | 55.0% |
| ! | ATGTGTGTGTGTGTGGTGGG+CGG | + | chr4.4:25778465-25778484 | None:intergenic | 55.0% |
| ! | CAATGCTTGCTGCCGTTGCA+GGG | + | chr4.4:25777437-25777456 | None:intergenic | 55.0% |
| ! | CAGCACTTGCTGGTCCTTAG+TGG | + | chr4.4:25779518-25779537 | None:intergenic | 55.0% |
| ! | GCCCGTTAGGGTTGTTGACT+GGG | + | chr4.4:25777285-25777304 | None:intergenic | 55.0% |
| ! | GCGGCATCACAGTTTTACGG+CGG | + | chr4.4:25778639-25778658 | None:intergenic | 55.0% |
| ! | GGAAGAGCACACTTCGTTCC+AGG | - | chr4.4:25779461-25779480 | MS.gene008760:intron | 55.0% |
| ! | TCAATGCTTGCTGCCGTTGC+AGG | + | chr4.4:25777438-25777457 | None:intergenic | 55.0% |
| ! | TTCCATCCATGTGGTGGGGT+GGG | + | chr4.4:25779246-25779265 | None:intergenic | 55.0% |
| !! | GCAACGGCAGCAAGCATTGA+CGG | - | chr4.4:25777438-25777457 | MS.gene008760:intron | 55.0% |
| AGCGCTATCGCGGCCAAAAC+TGG | + | chr4.4:25777664-25777683 | None:intergenic | 60.0% | |
| CACCCCACCACATGGATGGA+AGG | - | chr4.4:25779245-25779264 | MS.gene008760:intron | 60.0% | |
| CCCCACCACATGGATGGAAG+GGG | - | chr4.4:25779247-25779266 | MS.gene008760:intron | 60.0% | |
| CCCCTTCCATCCATGTGGTG+GGG | + | chr4.4:25779250-25779269 | None:intergenic | 60.0% | |
| CGAGGAGCTGGTTGTAGGAG+AGG | - | chr4.4:25779209-25779228 | MS.gene008760:CDS | 60.0% | |
| CGTTCCAGGGCATATCTCGG+TGG | - | chr4.4:25779475-25779494 | MS.gene008760:intron | 60.0% | |
| CTGCCGTTGCAGGGAGTTGA+TGG | + | chr4.4:25777428-25777447 | None:intergenic | 60.0% | |
| GACTGTCTTAGTGGCTGGGG+TGG | - | chr4.4:25779994-25780013 | MS.gene008760:intron | 60.0% | |
| GGGCAGAACTCAGCACTTGC+TGG | + | chr4.4:25779528-25779547 | None:intergenic | 60.0% | |
| ! | CTTCCATCCATGTGGTGGGG+TGG | + | chr4.4:25779247-25779266 | None:intergenic | 60.0% |
| ! | GTGACGCGGCAGTCCAGTTT+TGG | - | chr4.4:25777648-25777667 | MS.gene008760:intron | 60.0% |
| ! | TCCATCCATGTGGTGGGGTG+GGG | + | chr4.4:25779245-25779264 | None:intergenic | 60.0% |
| !! | AAGGCTCTAGAAGCGGCCAC+TGG | + | chr4.4:25777939-25777958 | None:intergenic | 60.0% |
| !! | AGTTTTGGCCGCGATAGCGC+TGG | - | chr4.4:25777663-25777682 | MS.gene008760:intron | 60.0% |
| !! | CGGAAGTGCCCAAGTAGCCA+TGG | - | chr4.4:25775351-25775370 | MS.gene008760:CDS | 60.0% |
| !! | GTTTTGGCCGCGATAGCGCT+GGG | - | chr4.4:25777664-25777683 | MS.gene008760:intron | 60.0% |
| !! | TGTGTGTGTGTGTGGTGGGC+GGG | + | chr4.4:25778464-25778483 | None:intergenic | 60.0% |
| ATGCGGAGCGGGTCGATAGC+AGG | + | chr4.4:25777601-25777620 | None:intergenic | 65.0% | |
| GGACCTGCACCCTATGGTGC+TGG | - | chr4.4:25779313-25779332 | MS.gene008760:intron | 65.0% | |
| TCTCCAAATGCGCTGCGCGG+TGG | - | chr4.4:25777621-25777640 | MS.gene008760:intron | 65.0% | |
| ! | CATCCATGTGGTGGGGTGGG+GGG | + | chr4.4:25779243-25779262 | None:intergenic | 65.0% |
| ! | CCATCCATGTGGTGGGGTGG+GGG | + | chr4.4:25779244-25779263 | None:intergenic | 65.0% |
| !! | GTGTGTGTGTGTGGTGGGCG+GGG | + | chr4.4:25778463-25778482 | None:intergenic | 65.0% |
| ACGCCACCGCGCAGCGCATT+TGG | + | chr4.4:25777627-25777646 | None:intergenic | 70.0% | |
| CCCCCACCCCACCACATGGA+TGG | - | chr4.4:25779241-25779260 | MS.gene008760:intron | 70.0% | |
| TGCGCGGTGGCGTTGTGACG+CGG | - | chr4.4:25777634-25777653 | MS.gene008760:intron | 70.0% | |
| !! | TGTGTGTGGTGGGCGGGGCA+GGG | + | chr4.4:25778458-25778477 | None:intergenic | 70.0% |
| GCACCCCCCACCCCACCACA+TGG | - | chr4.4:25779237-25779256 | MS.gene008760:intron | 75.0% | |
| GGCCGCTCCCAGCGCTATCG+CGG | + | chr4.4:25777674-25777693 | None:intergenic | 75.0% | |
| ! | GGCCGCGATAGCGCTGGGAG+CGG | - | chr4.4:25777669-25777688 | MS.gene008760:intron | 75.0% |
| !! | GTGTGTGTGGTGGGCGGGGC+AGG | + | chr4.4:25778459-25778478 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 25775328 | 25780647 | 25775328 | ID=MS.gene008760 |
| chr4.4 | mRNA | 25775328 | 25780647 | 25775328 | ID=MS.gene008760.t1;Parent=MS.gene008760 |
| chr4.4 | exon | 25780457 | 25780647 | 25780457 | ID=MS.gene008760.t1.exon1;Parent=MS.gene008760.t1 |
| chr4.4 | CDS | 25780457 | 25780647 | 25780457 | ID=cds.MS.gene008760.t1;Parent=MS.gene008760.t1 |
| chr4.4 | exon | 25780244 | 25780351 | 25780244 | ID=MS.gene008760.t1.exon2;Parent=MS.gene008760.t1 |
| chr4.4 | CDS | 25780244 | 25780351 | 25780244 | ID=cds.MS.gene008760.t1;Parent=MS.gene008760.t1 |
| chr4.4 | exon | 25779166 | 25779255 | 25779166 | ID=MS.gene008760.t1.exon3;Parent=MS.gene008760.t1 |
| chr4.4 | CDS | 25779166 | 25779255 | 25779166 | ID=cds.MS.gene008760.t1;Parent=MS.gene008760.t1 |
| chr4.4 | exon | 25777090 | 25777174 | 25777090 | ID=MS.gene008760.t1.exon4;Parent=MS.gene008760.t1 |
| chr4.4 | CDS | 25777090 | 25777174 | 25777090 | ID=cds.MS.gene008760.t1;Parent=MS.gene008760.t1 |
| chr4.4 | exon | 25775944 | 25776038 | 25775944 | ID=MS.gene008760.t1.exon5;Parent=MS.gene008760.t1 |
| chr4.4 | CDS | 25775944 | 25776038 | 25775944 | ID=cds.MS.gene008760.t1;Parent=MS.gene008760.t1 |
| chr4.4 | exon | 25775328 | 25775376 | 25775328 | ID=MS.gene008760.t1.exon6;Parent=MS.gene008760.t1 |
| chr4.4 | CDS | 25775328 | 25775376 | 25775328 | ID=cds.MS.gene008760.t1;Parent=MS.gene008760.t1 |
| Gene Sequence |
| Protein sequence |
