Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39618.t1 | XP_003624868.1 | 96.6 | 203 | 7 | 0 | 3 | 205 | 2 | 204 | 1.70E-107 | 398.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39618.t1 | Q9XI05 | 91.6 | 203 | 17 | 0 | 3 | 205 | 2 | 204 | 7.9e-106 | 384.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39618.t1 | G7L4S2 | 96.6 | 203 | 7 | 0 | 3 | 205 | 2 | 204 | 1.2e-107 | 398.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39618.t1 | MTR_7g088490 | 96.552 | 203 | 7 | 0 | 3 | 205 | 2 | 204 | 1.43e-148 | 411 |
| MS.gene39618.t1 | MTR_4g087680 | 96.552 | 203 | 7 | 0 | 3 | 205 | 2 | 204 | 3.94e-147 | 407 |
| MS.gene39618.t1 | MTR_5g079740 | 33.333 | 126 | 84 | 0 | 6 | 131 | 12 | 137 | 4.47e-17 | 76.6 |
| MS.gene39618.t1 | MTR_2g098010 | 33.333 | 126 | 84 | 0 | 6 | 131 | 12 | 137 | 4.61e-17 | 76.6 |
| MS.gene39618.t1 | MTR_3g089040 | 26.455 | 189 | 137 | 2 | 9 | 197 | 54 | 240 | 2.99e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39618.t1 | AT1G21720 | 91.626 | 203 | 17 | 0 | 3 | 205 | 2 | 204 | 1.18e-142 | 396 |
| MS.gene39618.t1 | AT1G77440 | 92.118 | 203 | 16 | 0 | 3 | 205 | 2 | 204 | 1.45e-141 | 393 |
| MS.gene39618.t1 | AT1G77440 | 92.118 | 203 | 16 | 0 | 3 | 205 | 2 | 204 | 1.45e-141 | 393 |
| MS.gene39618.t1 | AT3G60820 | 26.168 | 214 | 142 | 3 | 6 | 205 | 12 | 223 | 8.31e-18 | 78.6 |
| MS.gene39618.t1 | AT3G60820 | 26.168 | 214 | 142 | 3 | 6 | 205 | 12 | 223 | 8.31e-18 | 78.6 |
| MS.gene39618.t1 | AT3G60820 | 33.333 | 126 | 84 | 0 | 6 | 131 | 12 | 137 | 1.42e-17 | 78.2 |
Find 46 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTCTTCATCGGTCTTTC+TGG | 0.122403 | 4.2:-24410418 | MS.gene39618:CDS |
| GAAGAGTTTATCATGAATTT+TGG | 0.140707 | 4.2:+24410432 | None:intergenic |
| CAGCCTGTAATTGCTGGATT+AGG | 0.273487 | 4.2:-24409254 | MS.gene39618:CDS |
| AGCCTGTAATTGCTGGATTA+GGG | 0.310212 | 4.2:-24409253 | MS.gene39618:CDS |
| GCAAAAGACTTCGTTGTTGC+TGG | 0.312434 | 4.2:-24407182 | MS.gene39618:CDS |
| ATCCTTTCCTTTACTTCTGT+TGG | 0.340096 | 4.2:+24405395 | None:intergenic |
| TCCCCTAATCCAGCAATTAC+AGG | 0.353996 | 4.2:+24409251 | None:intergenic |
| ACCGTGACTGTCTTAGTGGC+TGG | 0.366163 | 4.2:-24406009 | MS.gene39618:CDS |
| ATTACAGGCTGGCAAAAGTA+TGG | 0.375854 | 4.2:+24409266 | None:intergenic |
| TTTGGAAATTCTTTGGAAAT+CGG | 0.398276 | 4.2:+24410450 | None:intergenic |
| GTAGACCGTGACTGTCTTAG+TGG | 0.447953 | 4.2:-24406013 | MS.gene39618:CDS |
| GCGTCCATTGTGCAAATGAA+TGG | 0.449188 | 4.2:+24409218 | None:intergenic |
| TAGTTACAGTGTTTGAGAAT+CGG | 0.451438 | 4.2:+24410387 | None:intergenic |
| CCGTGACTGTCTTAGTGGCT+GGG | 0.465306 | 4.2:-24406008 | MS.gene39618:CDS |
| ACTTTAGGACAAACCATGTC+AGG | 0.468461 | 4.2:+24407113 | None:intergenic |
| ATTTGCACAATGGACGCGAT+TGG | 0.488319 | 4.2:-24409212 | MS.gene39618:CDS |
| TCTTTGGAAATCGGTAGCTA+TGG | 0.498667 | 4.2:+24410459 | None:intergenic |
| TACAGATGATAACAGTGCTT+GGG | 0.500678 | 4.2:+24406033 | None:intergenic |
| CAGCACTCCAACAGAAGTAA+AGG | 0.504233 | 4.2:-24405402 | MS.gene39618:CDS |
| TGAAGAACGTGATATGAAAC+CGG | 0.514373 | 4.2:-24410244 | MS.gene39618:CDS |
| CTGCTATGCAATACGAGAAA+CGG | 0.517535 | 4.2:-24410200 | MS.gene39618:intron |
| AACACCGAGTCTTCGATCGC+TGG | 0.522918 | 4.2:+24410492 | None:intergenic |
| CTACAGATGATAACAGTGCT+TGG | 0.527206 | 4.2:+24406032 | None:intergenic |
| ACTGCGTCCGAGTCTCTGTA+TGG | 0.530151 | 4.2:-24407158 | MS.gene39618:CDS |
| ATTCATGATAAACTCTTCAT+CGG | 0.530804 | 4.2:-24410427 | MS.gene39618:CDS |
| CTTGCCAGCCATGGCTACTA+CGG | 0.541713 | 4.2:+24410531 | None:intergenic |
| AGTGCCGTAGTAGCCATGGC+TGG | 0.553904 | 4.2:-24410535 | MS.gene39618:CDS |
| ACCAAACTAGCAAAAGTCTC+CGG | 0.563099 | 4.2:+24410225 | None:intergenic |
| CAAACCATTCATTTGCACAA+TGG | 0.566818 | 4.2:-24409222 | MS.gene39618:CDS |
| GTTTCTTATTCAGGAAGCTG+AGG | 0.568571 | 4.2:-24406074 | MS.gene39618:intron |
| GAGTCTTCGATCGCTGGCAA+TGG | 0.571455 | 4.2:+24410498 | None:intergenic |
| TGATAACAGTGCTTGGGAGA+TGG | 0.572635 | 4.2:+24406039 | None:intergenic |
| CGTGACTGTCTTAGTGGCTG+GGG | 0.572971 | 4.2:-24406007 | MS.gene39618:CDS |
| CGGAAGTGCCGTAGTAGCCA+TGG | 0.574000 | 4.2:-24410539 | MS.gene39618:CDS |
| GACTGTCTTAGTGGCTGGGG+TGG | 0.577441 | 4.2:-24406004 | MS.gene39618:CDS |
| GCCTGTAATTGCTGGATTAG+GGG | 0.580864 | 4.2:-24409252 | MS.gene39618:CDS |
| TTACAGTGTTTGAGAATCGG+TGG | 0.592428 | 4.2:+24410390 | None:intergenic |
| GAAGCAATTCTTGCCAGCCA+TGG | 0.594949 | 4.2:+24410522 | None:intergenic |
| GTAATCTAAAATCGTCGACA+TGG | 0.602064 | 4.2:+24410564 | None:intergenic |
| ATTGCCAGCGATCGAAGACT+CGG | 0.602697 | 4.2:-24410496 | MS.gene39618:CDS |
| CTAATCCAGCAATTACAGGC+TGG | 0.603284 | 4.2:+24409255 | None:intergenic |
| ATCGATGTTTAAGCCTGACA+TGG | 0.603428 | 4.2:-24407126 | MS.gene39618:intron |
| CTCCAACAGAAGTAAAGGAA+AGG | 0.604008 | 4.2:-24405397 | MS.gene39618:CDS |
| TAATCTAAAATCGTCGACAT+GGG | 0.640528 | 4.2:+24410565 | None:intergenic |
| ACAAGCACCATACAGAGACT+CGG | 0.663819 | 4.2:+24407151 | None:intergenic |
| CCCAGCCACTAAGACAGTCA+CGG | 0.679067 | 4.2:+24406008 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTATTTTTATTAATT+AGG | - | chr4.2:24410305-24410324 | MS.gene39618:intron | 0.0% |
| !! | ATAAAAAATATTAATGTGTA+TGG | - | chr4.2:24410209-24410228 | MS.gene39618:CDS | 10.0% |
| !! | ATGTTTAAGTATATTATTTA+AGG | + | chr4.2:24406958-24406977 | None:intergenic | 10.0% |
| !! | ATTTACATTATTATTAATCA+AGG | + | chr4.2:24410443-24410462 | None:intergenic | 10.0% |
| !!! | CAAGTTTTTAAAAATTAAAT+TGG | - | chr4.2:24410403-24410422 | MS.gene39618:CDS | 10.0% |
| !!! | GTTAATTTAAAATAGTTATT+GGG | - | chr4.2:24409600-24409619 | MS.gene39618:intron | 10.0% |
| !!! | TATTTTTTTTTTTAGCATTA+TGG | + | chr4.2:24406993-24407012 | None:intergenic | 10.0% |
| !!! | TTATTTTTATTAATTAGGAT+TGG | - | chr4.2:24410310-24410329 | MS.gene39618:intron | 10.0% |
| !! | TTTCGATATTTATAACTTTA+AGG | + | chr4.2:24406810-24406829 | None:intergenic | 15.0% |
| !!! | GGTTAATTTAAAATAGTTAT+TGG | - | chr4.2:24409599-24409618 | MS.gene39618:intron | 15.0% |
| !!! | TAGATTATTCTAAAAATTGA+GGG | + | chr4.2:24408515-24408534 | None:intergenic | 15.0% |
| !!! | TTAATTGTTAGATTTGTTTA+GGG | + | chr4.2:24407263-24407282 | None:intergenic | 15.0% |
| !!! | TTAGATTATTCTAAAAATTG+AGG | + | chr4.2:24408516-24408535 | None:intergenic | 15.0% |
| !!! | TTTTCATTGTATATTAGTTT+TGG | - | chr4.2:24405989-24406008 | MS.gene39618:CDS | 15.0% |
| !!! | TTTTTTTTTTTTGTGATTGA+AGG | - | chr4.2:24405627-24405646 | MS.gene39618:intron | 15.0% |
| !! | AAAATAAAAAATCCACAAAG+TGG | - | chr4.2:24407231-24407250 | MS.gene39618:intron | 20.0% |
| !! | AGGAAAAATTACATAAAACT+AGG | - | chr4.2:24407159-24407178 | MS.gene39618:CDS | 20.0% |
| !! | GAAAAATTACATAAAACTAG+GGG | - | chr4.2:24407161-24407180 | MS.gene39618:CDS | 20.0% |
| !! | GGAAAAATTACATAAAACTA+GGG | - | chr4.2:24407160-24407179 | MS.gene39618:CDS | 20.0% |
| !! | TATACAATGAAAATTATCGT+CGG | + | chr4.2:24405982-24406001 | None:intergenic | 20.0% |
| !! | TCATAAATTTGATCTAATCT+TGG | + | chr4.2:24405868-24405887 | None:intergenic | 20.0% |
| !! | TTTAAATTTCAACAAGTTAC+TGG | + | chr4.2:24406482-24406501 | None:intergenic | 20.0% |
| !!! | AAAAAAAAGTACGTTGTTTA+AGG | + | chr4.2:24407024-24407043 | None:intergenic | 20.0% |
| !!! | AGAATAACATGTCTTTTATT+TGG | + | chr4.2:24409298-24409317 | None:intergenic | 20.0% |
| !!! | AGATTATTCTAAAAATTGAG+GGG | + | chr4.2:24408514-24408533 | None:intergenic | 20.0% |
| !!! | ATATTAGTTTTGGAAGTAAA+GGG | - | chr4.2:24405999-24406018 | MS.gene39618:CDS | 20.0% |
| !!! | ATCATATTTTTGATCTCTTA+AGG | - | chr4.2:24410380-24410399 | MS.gene39618:intron | 20.0% |
| !!! | CATTATTTTTCAAAGCTTAA+CGG | + | chr4.2:24408176-24408195 | None:intergenic | 20.0% |
| !!! | CTTAATTGTTAGATTTGTTT+AGG | + | chr4.2:24407264-24407283 | None:intergenic | 20.0% |
| !!! | GGAATAATATTTTGCATAAA+AGG | + | chr4.2:24408493-24408512 | None:intergenic | 20.0% |
| !!! | GTTTACGCTTAATATTTTTT+TGG | - | chr4.2:24408205-24408224 | MS.gene39618:intron | 20.0% |
| !!! | TATATTAGTTTTGGAAGTAA+AGG | - | chr4.2:24405998-24406017 | MS.gene39618:CDS | 20.0% |
| !!! | TTCTTTAGTTGTTTGTTATT+GGG | - | chr4.2:24409990-24410009 | MS.gene39618:intron | 20.0% |
| ! | AAAATTTATGCAAAGAAGGA+AGG | + | chr4.2:24407991-24408010 | None:intergenic | 25.0% |
| ! | AATTGCCTAAATTAAAGAAG+AGG | - | chr4.2:24407733-24407752 | MS.gene39618:intron | 25.0% |
| ! | ATTCATGATAAACTCTTCAT+CGG | - | chr4.2:24405508-24405527 | MS.gene39618:intron | 25.0% |
| ! | CAGAAAAATTTATGCAAAGA+AGG | + | chr4.2:24407995-24408014 | None:intergenic | 25.0% |
| ! | CCTTTGATCTGAAAATATTT+GGG | - | chr4.2:24408445-24408464 | MS.gene39618:intron | 25.0% |
| ! | CTACTGTTCATATATTATCT+TGG | - | chr4.2:24406767-24406786 | MS.gene39618:intron | 25.0% |
| ! | GAAATTGTTATGATGTAATC+AGG | + | chr4.2:24406547-24406566 | None:intergenic | 25.0% |
| ! | GACAAAACAAGTTAAACTTT+AGG | + | chr4.2:24408840-24408859 | None:intergenic | 25.0% |
| ! | TATAAACTACACATCTCAAA+CGG | + | chr4.2:24408084-24408103 | None:intergenic | 25.0% |
| ! | TCCTTTGATCTGAAAATATT+TGG | - | chr4.2:24408444-24408463 | MS.gene39618:intron | 25.0% |
| ! | TTCATATATTATCTTGGAGT+GGG | - | chr4.2:24406773-24406792 | MS.gene39618:intron | 25.0% |
| !! | AACCTAAACTTTTATCATAG+TGG | - | chr4.2:24410482-24410501 | MS.gene39618:CDS | 25.0% |
| !! | ATCTAAATCAGTGTTATTGA+TGG | - | chr4.2:24408530-24408549 | MS.gene39618:intron | 25.0% |
| !! | GAAGAGTTTATCATGAATTT+TGG | + | chr4.2:24405506-24405525 | None:intergenic | 25.0% |
| !! | GTAAACCTCTTCTTTAATTT+AGG | + | chr4.2:24407741-24407760 | None:intergenic | 25.0% |
| !! | TATGCTTTCCTTTTCTTTTT+AGG | - | chr4.2:24406640-24406659 | MS.gene39618:intron | 25.0% |
| !! | TGATTTGTGAATATTACAGA+TGG | - | chr4.2:24405841-24405860 | MS.gene39618:intron | 25.0% |
| !! | TGGATTGTATCTTCATTTTA+TGG | - | chr4.2:24409103-24409122 | MS.gene39618:intron | 25.0% |
| !! | TTCTTTAATTTAGGCAATTG+AGG | + | chr4.2:24407732-24407751 | None:intergenic | 25.0% |
| !! | TTTGGAAATTCTTTGGAAAT+CGG | + | chr4.2:24405488-24405507 | None:intergenic | 25.0% |
| !!! | AGTACATTTTGGTTCAATTA+AGG | - | chr4.2:24406278-24406297 | MS.gene39618:intron | 25.0% |
| !!! | CATGAATTTTGGAAATTCTT+TGG | + | chr4.2:24405495-24405514 | None:intergenic | 25.0% |
| !!! | CTTCTTTAGTTGTTTGTTAT+TGG | - | chr4.2:24409989-24410008 | MS.gene39618:intron | 25.0% |
| !!! | GTAGAGAAATTTGTTATACA+TGG | + | chr4.2:24409014-24409033 | None:intergenic | 25.0% |
| !!! | GTCTTTTATTTGGAAATCTT+GGG | + | chr4.2:24409288-24409307 | None:intergenic | 25.0% |
| !!! | TATTTTATTTTTGCCCGTTA+GGG | + | chr4.2:24407212-24407231 | None:intergenic | 25.0% |
| !!! | TCTGAATCGTTTTTTGTTTT+GGG | - | chr4.2:24405594-24405613 | MS.gene39618:intron | 25.0% |
| !!! | TCTTCATTTTATGGTTTTGA+TGG | - | chr4.2:24409112-24409131 | MS.gene39618:intron | 25.0% |
| !!! | TCTTTAGTTGTTTGTTATTG+GGG | - | chr4.2:24409991-24410010 | MS.gene39618:intron | 25.0% |
| !!! | TGAATGATTTGGTTGAATTA+GGG | - | chr4.2:24405806-24405825 | MS.gene39618:intron | 25.0% |
| !!! | TGTCTTTTATTTGGAAATCT+TGG | + | chr4.2:24409289-24409308 | None:intergenic | 25.0% |
| !!! | TTAACCTCGTTTTTAAATCT+TGG | - | chr4.2:24406149-24406168 | MS.gene39618:intron | 25.0% |
| !!! | TTATTTTATTTTTGCCCGTT+AGG | + | chr4.2:24407213-24407232 | None:intergenic | 25.0% |
| !!! | TTCTGAATCGTTTTTTGTTT+TGG | - | chr4.2:24405593-24405612 | MS.gene39618:intron | 25.0% |
| !!! | TTGAATGATTTGGTTGAATT+AGG | - | chr4.2:24405805-24405824 | MS.gene39618:intron | 25.0% |
| !!! | TTGTTTTTCTTCTTTTGCTT+AGG | - | chr4.2:24407947-24407966 | MS.gene39618:intron | 25.0% |
| !!! | TTTCCTTTTCTTTTTAGGTT+CGG | - | chr4.2:24406645-24406664 | MS.gene39618:intron | 25.0% |
| !!! | TTTTAATGTCATTTTGCTCT+TGG | + | chr4.2:24407059-24407078 | None:intergenic | 25.0% |
| AAGAAACATAGCATTTCAGA+GGG | + | chr4.2:24406505-24406524 | None:intergenic | 30.0% | |
| ACAAATCTAACAATTAAGCG+CGG | - | chr4.2:24407266-24407285 | MS.gene39618:intron | 30.0% | |
| ACACTACTCTAATATGTTGT+CGG | - | chr4.2:24407103-24407122 | MS.gene39618:intron | 30.0% | |
| AGCCACTATGATAAAAGTTT+AGG | + | chr4.2:24410487-24410506 | None:intergenic | 30.0% | |
| ATCAAGCTAAGCTAAATCAT+GGG | + | chr4.2:24409779-24409798 | None:intergenic | 30.0% | |
| GTAAAACAGAACTAGACATA+AGG | - | chr4.2:24406246-24406265 | MS.gene39618:intron | 30.0% | |
| GTTCATATATTATCTTGGAG+TGG | - | chr4.2:24406772-24406791 | MS.gene39618:intron | 30.0% | |
| GTTTGGATTTAGATAGCATT+TGG | + | chr4.2:24406367-24406386 | None:intergenic | 30.0% | |
| TAGTTACAGTGTTTGAGAAT+CGG | + | chr4.2:24405551-24405570 | None:intergenic | 30.0% | |
| TATCAAGCTAAGCTAAATCA+TGG | + | chr4.2:24409780-24409799 | None:intergenic | 30.0% | |
| TATTCCTCATGACACTTTAT+TGG | - | chr4.2:24407841-24407860 | MS.gene39618:intron | 30.0% | |
| ! | AAAATCATAAGCTTCCCTTT+TGG | + | chr4.2:24409833-24409852 | None:intergenic | 30.0% |
| ! | AAATGATTTTTCACATGCCA+AGG | + | chr4.2:24410124-24410143 | None:intergenic | 30.0% |
| ! | AAGCTTATGATTTTTGTGCT+TGG | - | chr4.2:24409839-24409858 | MS.gene39618:intron | 30.0% |
| ! | AATGCTATGTTTCTTCCTTT+TGG | - | chr4.2:24406510-24406529 | MS.gene39618:intron | 30.0% |
| ! | ACCTCTTCCTATTTAGTTTA+GGG | + | chr4.2:24407778-24407797 | None:intergenic | 30.0% |
| ! | AGTAAAGGAAAGGATTTTGA+AGG | - | chr4.2:24410548-24410567 | MS.gene39618:CDS | 30.0% |
| ! | CCCAAATATTTTCAGATCAA+AGG | + | chr4.2:24408448-24408467 | None:intergenic | 30.0% |
| ! | CTTTTATCATAGTGGCTTAT+TGG | - | chr4.2:24410490-24410509 | MS.gene39618:CDS | 30.0% |
| ! | GGCAGAAAAATAGTACATTT+TGG | - | chr4.2:24406267-24406286 | MS.gene39618:intron | 30.0% |
| ! | GTAAAGGAAAGGATTTTGAA+GGG | - | chr4.2:24410549-24410568 | MS.gene39618:CDS | 30.0% |
| ! | TAAATCAGTGTTATTGATGG+CGG | - | chr4.2:24408533-24408552 | MS.gene39618:intron | 30.0% |
| ! | TAAGAAGCATGTAGTGTTAA+AGG | + | chr4.2:24408973-24408992 | None:intergenic | 30.0% |
| ! | TCGACGATTTTAGATTACAA+CGG | - | chr4.2:24405376-24405395 | MS.gene39618:CDS | 30.0% |
| ! | TTGTTAGATTTGTTTAGGGT+TGG | + | chr4.2:24407259-24407278 | None:intergenic | 30.0% |
| !! | TATTTTTCAAAGCTTAACGG+AGG | + | chr4.2:24408173-24408192 | None:intergenic | 30.0% |
| !! | TGCTTTTCTGGATTTTGTTT+AGG | - | chr4.2:24405763-24405782 | MS.gene39618:intron | 30.0% |
| !! | TGTCTGTTTTTCACTTGTTT+TGG | - | chr4.2:24408905-24408924 | MS.gene39618:intron | 30.0% |
| !! | TTATTCTGCTTTTACTGTTC+AGG | - | chr4.2:24409311-24409330 | MS.gene39618:intron | 30.0% |
| !!! | ACATTTTGGTTCAATTAAGG+AGG | - | chr4.2:24406281-24406300 | MS.gene39618:intron | 30.0% |
| !!! | GGTCATTTTTTTTTCTTGCT+TGG | + | chr4.2:24408380-24408399 | None:intergenic | 30.0% |
| AACAAATTTCTCTACACCCT+TGG | - | chr4.2:24409019-24409038 | MS.gene39618:intron | 35.0% | |
| AAGAGTTTGAGCTACATTCT+AGG | - | chr4.2:24409504-24409523 | MS.gene39618:intron | 35.0% | |
| AAGTGTCATGAGGAATATCA+TGG | + | chr4.2:24407838-24407857 | None:intergenic | 35.0% | |
| ACCACATTGAAAATTGTCGA+GGG | - | chr4.2:24409211-24409230 | MS.gene39618:CDS | 35.0% | |
| AGAATAGTGTCCAACTAAGT+TGG | - | chr4.2:24407079-24407098 | MS.gene39618:intron | 35.0% | |
| AGAGTTTGAGCTACATTCTA+GGG | - | chr4.2:24409505-24409524 | MS.gene39618:intron | 35.0% | |
| ATATATTATCTTGGAGTGGG+AGG | - | chr4.2:24406776-24406795 | MS.gene39618:intron | 35.0% | |
| ATCCTTTCCTTTACTTCTGT+TGG | + | chr4.2:24410543-24410562 | None:intergenic | 35.0% | |
| ATCGATCGTCAACACAAAAT+CGG | - | chr4.2:24407309-24407328 | MS.gene39618:intron | 35.0% | |
| ATGGGGGATATTTCTTAAAC+AGG | - | chr4.2:24409377-24409396 | MS.gene39618:intron | 35.0% | |
| ATTGAAAATTGTCGAGGGAA+AGG | - | chr4.2:24409216-24409235 | MS.gene39618:CDS | 35.0% | |
| CAAACCATTCATTTGCACAA+TGG | - | chr4.2:24406713-24406732 | MS.gene39618:intron | 35.0% | |
| CAAATCTAACAATTAAGCGC+GGG | - | chr4.2:24407267-24407286 | MS.gene39618:intron | 35.0% | |
| CAGATCAAAGGATTAACATG+AGG | + | chr4.2:24408436-24408455 | None:intergenic | 35.0% | |
| CAGGTATGTAAACAACCAAA+AGG | + | chr4.2:24406528-24406547 | None:intergenic | 35.0% | |
| CATCACACCAAGTTCTATTA+GGG | + | chr4.2:24405959-24405978 | None:intergenic | 35.0% | |
| CATCCTTAACAAATTGGACA+TGG | - | chr4.2:24408604-24408623 | MS.gene39618:intron | 35.0% | |
| CTGAAGAAACAATCGCAAAA+TGG | + | chr4.2:24409730-24409749 | None:intergenic | 35.0% | |
| GAAGAAACATAGCATTTCAG+AGG | + | chr4.2:24406506-24406525 | None:intergenic | 35.0% | |
| GAAGATCCCCTAAACTAAAT+AGG | - | chr4.2:24407768-24407787 | MS.gene39618:intron | 35.0% | |
| GTATAAATGTGTGTGTGTGT+GGG | + | chr4.2:24408414-24408433 | None:intergenic | 35.0% | |
| GTGATGTGCATTGAATGATT+TGG | - | chr4.2:24405795-24405814 | MS.gene39618:intron | 35.0% | |
| TAAACTGCTCGAATGAGATA+GGG | + | chr4.2:24409485-24409504 | None:intergenic | 35.0% | |
| TACAGATGATAACAGTGCTT+GGG | + | chr4.2:24409905-24409924 | None:intergenic | 35.0% | |
| TATAAATGTGTGTGTGTGTG+GGG | + | chr4.2:24408413-24408432 | None:intergenic | 35.0% | |
| TCAAGCTAAGCTAAATCATG+GGG | + | chr4.2:24409778-24409797 | None:intergenic | 35.0% | |
| TCCTCGTTATATGATCTTAC+AGG | + | chr4.2:24409140-24409159 | None:intergenic | 35.0% | |
| TCGATACACTACAAGTTGTT+TGG | + | chr4.2:24406384-24406403 | None:intergenic | 35.0% | |
| TGAAGAACGTGATATGAAAC+CGG | - | chr4.2:24405691-24405710 | MS.gene39618:intron | 35.0% | |
| TTAAACTGCTCGAATGAGAT+AGG | + | chr4.2:24409486-24409505 | None:intergenic | 35.0% | |
| TTCGCCAAGATTTAAAAACG+AGG | + | chr4.2:24406156-24406175 | None:intergenic | 35.0% | |
| TTGTGCTTGGTTTCTTATTC+AGG | - | chr4.2:24409852-24409871 | MS.gene39618:intron | 35.0% | |
| TTTATTTGGAAATCTTGGGC+TGG | + | chr4.2:24409284-24409303 | None:intergenic | 35.0% | |
| ! | AACTTGTAGTGTATCGACAT+TGG | - | chr4.2:24406387-24406406 | MS.gene39618:intron | 35.0% |
| ! | AAGAGGTGTACTTCACAAAA+AGG | - | chr4.2:24407791-24407810 | MS.gene39618:intron | 35.0% |
| ! | AGAGGTGTACTTCACAAAAA+GGG | - | chr4.2:24407792-24407811 | MS.gene39618:intron | 35.0% |
| ! | CACCTCTTCCTATTTAGTTT+AGG | + | chr4.2:24407779-24407798 | None:intergenic | 35.0% |
| ! | CCTCTTCCTATTTAGTTTAG+GGG | + | chr4.2:24407777-24407796 | None:intergenic | 35.0% |
| ! | TCGACAATTTTCAATGTGGT+GGG | + | chr4.2:24409211-24409230 | None:intergenic | 35.0% |
| ! | TCTTCTTTTGCTTAGGAGAT+GGG | - | chr4.2:24407954-24407973 | MS.gene39618:intron | 35.0% |
| ! | TTCTTCTTTTGCTTAGGAGA+TGG | - | chr4.2:24407953-24407972 | MS.gene39618:intron | 35.0% |
| ! | TTTCTCCTTGTTTGCCAAAA+GGG | - | chr4.2:24409816-24409835 | MS.gene39618:intron | 35.0% |
| !! | AAGGATTTTGAAGGGAAGAA+TGG | - | chr4.2:24410557-24410576 | MS.gene39618:CDS | 35.0% |
| !! | CATGTCCAATTTGTTAAGGA+TGG | + | chr4.2:24408606-24408625 | None:intergenic | 35.0% |
| !! | CTGTTGGTGGCAAATATATT+GGG | - | chr4.2:24407688-24407707 | MS.gene39618:intron | 35.0% |
| !!! | AGTTTTGGAAGTAAAGGGAT+TGG | - | chr4.2:24406004-24406023 | MS.gene39618:CDS | 35.0% |
| !!! | GTTTTGGAAGTAAAGGGATT+GGG | - | chr4.2:24406005-24406024 | MS.gene39618:CDS | 35.0% |
| !!! | TTCTCCAAGTTTTGGTGTTT+TGG | + | chr4.2:24407507-24407526 | None:intergenic | 35.0% |
| !!! | TTTTGGTTCAATTAAGGAGG+TGG | - | chr4.2:24406284-24406303 | MS.gene39618:intron | 35.0% |
| AAACTCTTCATCGGTCTTTC+TGG | - | chr4.2:24405517-24405536 | MS.gene39618:intron | 40.0% | |
| AACAGAGCTTCGAATAGTTG+TGG | - | chr4.2:24407640-24407659 | MS.gene39618:intron | 40.0% | |
| AAGATCATATAACGAGGAGC+TGG | - | chr4.2:24409142-24409161 | MS.gene39618:intron | 40.0% | |
| AAGTGCATCAGGGTAGTATA+TGG | - | chr4.2:24406174-24406193 | MS.gene39618:intron | 40.0% | |
| ACAATCGCAAAATGGTCGAA+TGG | + | chr4.2:24409722-24409741 | None:intergenic | 40.0% | |
| ACACCAAAACTTGGAGAAAG+CGG | - | chr4.2:24407509-24407528 | MS.gene39618:intron | 40.0% | |
| ACAGAGCTTCGAATAGTTGT+GGG | - | chr4.2:24407641-24407660 | MS.gene39618:intron | 40.0% | |
| ACCAAACTAGCAAAAGTCTC+CGG | + | chr4.2:24405713-24405732 | None:intergenic | 40.0% | |
| ACCTCCAAAACACCAAAACT+TGG | - | chr4.2:24407500-24407519 | MS.gene39618:intron | 40.0% | |
| ACTACAAAGCTCAACCACTA+AGG | - | chr4.2:24409438-24409457 | MS.gene39618:intron | 40.0% | |
| AGCAACAAGCAGAAAAGATC+AGG | - | chr4.2:24409577-24409596 | MS.gene39618:intron | 40.0% | |
| AGCCTGTAATTGCTGGATTA+GGG | - | chr4.2:24406682-24406701 | MS.gene39618:intron | 40.0% | |
| ATAAATGTGTGTGTGTGTGG+GGG | + | chr4.2:24408412-24408431 | None:intergenic | 40.0% | |
| ATCGATGTTTAAGCCTGACA+TGG | - | chr4.2:24408809-24408828 | MS.gene39618:intron | 40.0% | |
| ATGAGGATTTGATGCAGGTA+TGG | - | chr4.2:24409358-24409377 | MS.gene39618:intron | 40.0% | |
| ATTACAGGCTGGCAAAAGTA+TGG | + | chr4.2:24406672-24406691 | None:intergenic | 40.0% | |
| CACCACATTGAAAATTGTCG+AGG | - | chr4.2:24409210-24409229 | MS.gene39618:CDS | 40.0% | |
| CCAATATATTTGCCACCAAC+AGG | + | chr4.2:24407690-24407709 | None:intergenic | 40.0% | |
| CCCCTAAACTAAATAGGAAG+AGG | - | chr4.2:24407774-24407793 | MS.gene39618:intron | 40.0% | |
| CCTTAACAAATTGGACATGG+TGG | - | chr4.2:24408607-24408626 | MS.gene39618:intron | 40.0% | |
| CTACAGATGATAACAGTGCT+TGG | + | chr4.2:24409906-24409925 | None:intergenic | 40.0% | |
| CTCCAACAGAAGTAAAGGAA+AGG | - | chr4.2:24410538-24410557 | MS.gene39618:CDS | 40.0% | |
| CTGCTATGCAATACGAGAAA+CGG | - | chr4.2:24405735-24405754 | MS.gene39618:intron | 40.0% | |
| CTTCCTATAGAACTTGCATG+TGG | + | chr4.2:24409531-24409550 | None:intergenic | 40.0% | |
| GAAATTAAACCAGCACCACA+GGG | + | chr4.2:24409262-24409281 | None:intergenic | 40.0% | |
| GACACAACCCTAATAGAACT+TGG | - | chr4.2:24405949-24405968 | MS.gene39618:intron | 40.0% | |
| GAGGTGTACTTCACAAAAAG+GGG | - | chr4.2:24407793-24407812 | MS.gene39618:intron | 40.0% | |
| GAGTAGTGTTCCAACTTAGT+TGG | + | chr4.2:24407092-24407111 | None:intergenic | 40.0% | |
| GCAACAAGCAGAAAAGATCA+GGG | - | chr4.2:24409578-24409597 | MS.gene39618:intron | 40.0% | |
| GCATCACACCAAGTTCTATT+AGG | + | chr4.2:24405960-24405979 | None:intergenic | 40.0% | |
| GCCTGTAAGATCATATAACG+AGG | - | chr4.2:24409136-24409155 | MS.gene39618:intron | 40.0% | |
| GCTGCAGCAAACAAAATTTG+AGG | + | chr4.2:24410517-24410536 | None:intergenic | 40.0% | |
| GGACCGAACCTAAAAAGAAA+AGG | + | chr4.2:24406651-24406670 | None:intergenic | 40.0% | |
| GGCAATATTAAGAGTTGCTG+CGG | - | chr4.2:24406116-24406135 | MS.gene39618:intron | 40.0% | |
| GGTATAAATGTGTGTGTGTG+TGG | + | chr4.2:24408415-24408434 | None:intergenic | 40.0% | |
| GTGCTATCTCAATAACAGCT+TGG | + | chr4.2:24408133-24408152 | None:intergenic | 40.0% | |
| GTTCAATTAAGGAGGTGGAA+TGG | - | chr4.2:24406289-24406308 | MS.gene39618:intron | 40.0% | |
| GTTTCTTATTCAGGAAGCTG+AGG | - | chr4.2:24409861-24409880 | MS.gene39618:intron | 40.0% | |
| TAGGCAATTGAGGTGAGAAA+TGG | + | chr4.2:24407722-24407741 | None:intergenic | 40.0% | |
| TATCGACATTGGTGCATTTG+AGG | - | chr4.2:24406398-24406417 | MS.gene39618:intron | 40.0% | |
| TCATGAGGAATATCATGGTC+AGG | + | chr4.2:24407833-24407852 | None:intergenic | 40.0% | |
| TGAGGATTTGATGCAGGTAT+GGG | - | chr4.2:24409359-24409378 | MS.gene39618:intron | 40.0% | |
| TGAGGTGGTTTCCAAGAAAT+CGG | - | chr4.2:24409074-24409093 | MS.gene39618:intron | 40.0% | |
| TGCAAAGTGCATGGTTAACT+TGG | - | chr4.2:24406041-24406060 | MS.gene39618:CDS | 40.0% | |
| TTACAGTGTTTGAGAATCGG+TGG | + | chr4.2:24405548-24405567 | None:intergenic | 40.0% | |
| ! | AAGGGATTGGGTTGTTAGTT+AGG | - | chr4.2:24406017-24406036 | MS.gene39618:CDS | 40.0% |
| ! | CGACAATTTTCAATGTGGTG+GGG | + | chr4.2:24409210-24409229 | None:intergenic | 40.0% |
| ! | CTCGACAATTTTCAATGTGG+TGG | + | chr4.2:24409212-24409231 | None:intergenic | 40.0% |
| ! | GAAACGGTATTGTGCTTTTC+TGG | - | chr4.2:24405751-24405770 | MS.gene39618:intron | 40.0% |
| ! | GCGGCTTGAAATGACATTTT+TGG | + | chr4.2:24408563-24408582 | None:intergenic | 40.0% |
| ! | GCGGCTTTATCTGCAATTTA+AGG | - | chr4.2:24406095-24406114 | MS.gene39618:intron | 40.0% |
| ! | GGAATCTGAGGTTCAAATAG+AGG | - | chr4.2:24409693-24409712 | MS.gene39618:intron | 40.0% |
| ! | GTTTCTCCTTGTTTGCCAAA+AGG | - | chr4.2:24409815-24409834 | MS.gene39618:intron | 40.0% |
| ! | TAGTTAGGTTGCAAAGTGCA+TGG | - | chr4.2:24406032-24406051 | MS.gene39618:CDS | 40.0% |
| ! | TCCCTCGACAATTTTCAATG+TGG | + | chr4.2:24409215-24409234 | None:intergenic | 40.0% |
| ! | TCTAAAACACCAAAACTCGC+CGG | - | chr4.2:24407472-24407491 | MS.gene39618:intron | 40.0% |
| ! | TCTTTGGAAATCGGTAGCTA+TGG | + | chr4.2:24405479-24405498 | None:intergenic | 40.0% |
| ! | TTTAGGGTAAAGGGAATCTG+AGG | - | chr4.2:24409681-24409700 | MS.gene39618:intron | 40.0% |
| !! | AATTTTCAATGTGGTGGGGT+GGG | + | chr4.2:24409206-24409225 | None:intergenic | 40.0% |
| !! | ACTTTAGGACAAACCATGTC+AGG | + | chr4.2:24408825-24408844 | None:intergenic | 40.0% |
| !! | CCACCATGTCCAATTTGTTA+AGG | + | chr4.2:24408610-24408629 | None:intergenic | 40.0% |
| !! | CCTGTTGGTGGCAAATATAT+TGG | - | chr4.2:24407687-24407706 | MS.gene39618:intron | 40.0% |
| !! | GTCCAATTTGTTAAGGATGG+CGG | + | chr4.2:24408603-24408622 | None:intergenic | 40.0% |
| !! | TTGGGAAAAGGCTTTAGAAG+CGG | + | chr4.2:24407884-24407903 | None:intergenic | 40.0% |
| !!! | CCAAGTTGCGATTTTAACTG+CGG | - | chr4.2:24406076-24406095 | MS.gene39618:intron | 40.0% |
| !!! | TCCAAGTTTTGGTGTTTTGG+AGG | + | chr4.2:24407504-24407523 | None:intergenic | 40.0% |
| AAATCGCAACTTGGTTGCAG+AGG | + | chr4.2:24406070-24406089 | None:intergenic | 45.0% | |
| AAATCTTGGCGAAGTGCATC+AGG | - | chr4.2:24406163-24406182 | MS.gene39618:intron | 45.0% | |
| AAGATCGACGATTGTACTGC+TGG | - | chr4.2:24409548-24409567 | MS.gene39618:intron | 45.0% | |
| AAGTCGTTTGTCCAACCTAG+TGG | + | chr4.2:24410098-24410117 | None:intergenic | 45.0% | |
| AATCTTGGCGAAGTGCATCA+GGG | - | chr4.2:24406164-24406183 | MS.gene39618:intron | 45.0% | |
| ACAAGCACCATACAGAGACT+CGG | + | chr4.2:24408787-24408806 | None:intergenic | 45.0% | |
| ACATTGGTGCATTTGAGGAC+TGG | - | chr4.2:24406403-24406422 | MS.gene39618:intron | 45.0% | |
| AGATCGACGATTGTACTGCT+GGG | - | chr4.2:24409549-24409568 | MS.gene39618:intron | 45.0% | |
| AGGATTTGATGCAGGTATGG+GGG | - | chr4.2:24409361-24409380 | MS.gene39618:intron | 45.0% | |
| AGGTGGTTTCCAAGAAATCG+GGG | - | chr4.2:24409076-24409095 | MS.gene39618:intron | 45.0% | |
| AGTTCAGCTTACAAGCCACT+AGG | - | chr4.2:24410080-24410099 | MS.gene39618:intron | 45.0% | |
| ATCAAGCCTTCATCATGAGG+TGG | - | chr4.2:24409059-24409078 | MS.gene39618:intron | 45.0% | |
| ATCCAGAATCCCCGATTTCT+TGG | + | chr4.2:24409088-24409107 | None:intergenic | 45.0% | |
| ATGGTCAGGAGCAAAGTCAT+TGG | + | chr4.2:24407819-24407838 | None:intergenic | 45.0% | |
| ATTTGCACAATGGACGCGAT+TGG | - | chr4.2:24406723-24406742 | MS.gene39618:intron | 45.0% | |
| CAAGCATGAGGATTTGATGC+AGG | - | chr4.2:24409353-24409372 | MS.gene39618:intron | 45.0% | |
| CACCAAAACTTGGAGAAAGC+GGG | - | chr4.2:24407510-24407529 | MS.gene39618:intron | 45.0% | |
| CAGAGCTTCGAATAGTTGTG+GGG | - | chr4.2:24407642-24407661 | MS.gene39618:intron | 45.0% | |
| CAGCACTCCAACAGAAGTAA+AGG | - | chr4.2:24410533-24410552 | MS.gene39618:CDS | 45.0% | |
| CAGCCTGTAATTGCTGGATT+AGG | - | chr4.2:24406681-24406700 | MS.gene39618:intron | 45.0% | |
| CCGCAGTTAAAATCGCAACT+TGG | + | chr4.2:24406079-24406098 | None:intergenic | 45.0% | |
| CTAATCCAGCAATTACAGGC+TGG | + | chr4.2:24406683-24406702 | None:intergenic | 45.0% | |
| CTGCATCAAATCCTCATGCT+TGG | + | chr4.2:24409355-24409374 | None:intergenic | 45.0% | |
| GAGGATTTGATGCAGGTATG+GGG | - | chr4.2:24409360-24409379 | MS.gene39618:intron | 45.0% | |
| GAGGTGGTTTCCAAGAAATC+GGG | - | chr4.2:24409075-24409094 | MS.gene39618:intron | 45.0% | |
| GCAAAAGACTTCGTTGTTGC+TGG | - | chr4.2:24408753-24408772 | MS.gene39618:intron | 45.0% | |
| GCATCAGGGTAGTATATGGT+AGG | - | chr4.2:24406178-24406197 | MS.gene39618:intron | 45.0% | |
| GCGTCCATTGTGCAAATGAA+TGG | + | chr4.2:24406720-24406739 | None:intergenic | 45.0% | |
| GGAAATTAAACCAGCACCAC+AGG | + | chr4.2:24409263-24409282 | None:intergenic | 45.0% | |
| GTTGTCAAAGATCAGTGCCA+TGG | + | chr4.2:24408647-24408666 | None:intergenic | 45.0% | |
| TAAATGTGTGTGTGTGTGGG+GGG | + | chr4.2:24408411-24408430 | None:intergenic | 45.0% | |
| TATAACGAGGAGCTGGTTGT+AGG | - | chr4.2:24409149-24409168 | MS.gene39618:intron | 45.0% | |
| TCCCCTAATCCAGCAATTAC+AGG | + | chr4.2:24406687-24406706 | None:intergenic | 45.0% | |
| TCTACACCCTTGGTATCTGT+GGG | - | chr4.2:24409029-24409048 | MS.gene39618:intron | 45.0% | |
| TGATAACAGTGCTTGGGAGA+TGG | + | chr4.2:24409899-24409918 | None:intergenic | 45.0% | |
| TGCCGCCATCCTTAACAAAT+TGG | - | chr4.2:24408598-24408617 | MS.gene39618:intron | 45.0% | |
| TGGAAACCACCTCATGATGA+AGG | + | chr4.2:24409068-24409087 | None:intergenic | 45.0% | |
| TTAGGGTTGGATCCACTTTG+TGG | + | chr4.2:24407246-24407265 | None:intergenic | 45.0% | |
| TTCCAAGAAATCGGGGATTC+TGG | - | chr4.2:24409083-24409102 | MS.gene39618:intron | 45.0% | |
| ! | ACCGGAGACTTTTGCTAGTT+TGG | - | chr4.2:24405709-24405728 | MS.gene39618:intron | 45.0% |
| ! | AGCGCCAATAAAGTGTCATG+AGG | + | chr4.2:24407848-24407867 | None:intergenic | 45.0% |
| ! | AGCTTCCCTTTTGGCAAACA+AGG | + | chr4.2:24409824-24409843 | None:intergenic | 45.0% |
| ! | GCCTGTAATTGCTGGATTAG+GGG | - | chr4.2:24406683-24406702 | MS.gene39618:intron | 45.0% |
| ! | TGGACAAACGACTTTTGCCT+TGG | - | chr4.2:24410104-24410123 | MS.gene39618:intron | 45.0% |
| ! | TTTTGCCAGCCTGTAATTGC+TGG | - | chr4.2:24406675-24406694 | MS.gene39618:intron | 45.0% |
| !! | ATTTTCAATGTGGTGGGGTG+GGG | + | chr4.2:24409205-24409224 | None:intergenic | 45.0% |
| !! | CAATTTTCAATGTGGTGGGG+TGG | + | chr4.2:24409207-24409226 | None:intergenic | 45.0% |
| !! | CTGCTTTTACTGTTCAGGCT+TGG | - | chr4.2:24409316-24409335 | MS.gene39618:intron | 45.0% |
| !!! | GGCGAGTTTTGGTGTTTTAG+AGG | + | chr4.2:24407473-24407492 | None:intergenic | 45.0% |
| !!! | GGTGTTTTGGAGGTTGTTTC+CGG | + | chr4.2:24407494-24407513 | None:intergenic | 45.0% |
| !! | TATTATTAAAAAAAAAAAGA+AGG | - | chr4.2:24407139-24407158 | MS.gene39618:CDS | 5.0% |
| !! | TTTATTAAAAAAAGAAATAA+TGG | - | chr4.2:24408036-24408055 | MS.gene39618:intron | 5.0% |
| AAAGCTGTCCTTCGTCGTTG+GGG | + | chr4.2:24407916-24407935 | None:intergenic | 50.0% | |
| ACCCAGTCAACAACCCTAAC+GGG | - | chr4.2:24407196-24407215 | MS.gene39618:intron | 50.0% | |
| AGAGAGAGAGAGAGACAAGG+AGG | + | chr4.2:24407405-24407424 | None:intergenic | 50.0% | |
| ATTGCCAGCGATCGAAGACT+CGG | - | chr4.2:24405439-24405458 | MS.gene39618:intron | 50.0% | |
| CAAAGCTGTCCTTCGTCGTT+GGG | + | chr4.2:24407917-24407936 | None:intergenic | 50.0% | |
| CAGCTTACAAGCCACTAGGT+TGG | - | chr4.2:24410084-24410103 | MS.gene39618:intron | 50.0% | |
| CAGGGTAGTATATGGTAGGC+TGG | - | chr4.2:24406182-24406201 | MS.gene39618:intron | 50.0% | |
| CCTTCACCCACAGATACCAA+GGG | + | chr4.2:24409038-24409057 | None:intergenic | 50.0% | |
| CGAAGCTCTGTTGTCAAACG+CGG | + | chr4.2:24407632-24407651 | None:intergenic | 50.0% | |
| CTCTACACCCTTGGTATCTG+TGG | - | chr4.2:24409028-24409047 | MS.gene39618:intron | 50.0% | |
| CTTCGTTCCAGGGCATATCT+CGG | - | chr4.2:24409409-24409428 | MS.gene39618:intron | 50.0% | |
| GAAGCAATTCTTGCCAGCCA+TGG | + | chr4.2:24405416-24405435 | None:intergenic | 50.0% | |
| GACCCAGTCAACAACCCTAA+CGG | - | chr4.2:24407195-24407214 | MS.gene39618:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGACA+AGG | + | chr4.2:24407408-24407427 | None:intergenic | 50.0% | |
| GCAACGGCAGCAAACATTGA+CGG | - | chr4.2:24407353-24407372 | MS.gene39618:intron | 50.0% | |
| GGCATCAAGCCTTCATCATG+AGG | - | chr4.2:24409056-24409075 | MS.gene39618:intron | 50.0% | |
| GGGCCACATGCAAGTTCTAT+AGG | - | chr4.2:24409525-24409544 | MS.gene39618:intron | 50.0% | |
| GGGCTCTGTGAATTGGGAAA+AGG | + | chr4.2:24407896-24407915 | None:intergenic | 50.0% | |
| GTAGACCGTGACTGTCTTAG+TGG | - | chr4.2:24409922-24409941 | MS.gene39618:intron | 50.0% | |
| GTCAAAGATCAGTGCCATGG+TGG | + | chr4.2:24408644-24408663 | None:intergenic | 50.0% | |
| GTTCAGGCTTGGACAAAAGC+TGG | - | chr4.2:24409327-24409346 | MS.gene39618:intron | 50.0% | |
| TACTCACAGTCACAGCCTGT+TGG | - | chr4.2:24407672-24407691 | MS.gene39618:intron | 50.0% | |
| TATTGGCGCTTCGTTACCAG+TGG | - | chr4.2:24407858-24407877 | MS.gene39618:intron | 50.0% | |
| TCGTTGGGGCTCTGTGAATT+GGG | + | chr4.2:24407902-24407921 | None:intergenic | 50.0% | |
| TGCAATGTCCGACTTCAGAG+TGG | - | chr4.2:24409645-24409664 | MS.gene39618:intron | 50.0% | |
| TGGTTGTCAATCTGCCACCA+TGG | - | chr4.2:24408627-24408646 | MS.gene39618:intron | 50.0% | |
| ! | AAAAGCTGGCTCCAAGCATG+AGG | - | chr4.2:24409341-24409360 | MS.gene39618:intron | 50.0% |
| ! | CAATGTTTGCTGCCGTTGCA+GGG | + | chr4.2:24407352-24407371 | None:intergenic | 50.0% |
| ! | GAAGAGCACACTTCGTTCCA+GGG | - | chr4.2:24409399-24409418 | MS.gene39618:intron | 50.0% |
| ! | GGCATCACAGAGTTTTACGG+CGG | + | chr4.2:24408582-24408601 | None:intergenic | 50.0% |
| ! | GGCGGCATCACAGAGTTTTA+CGG | + | chr4.2:24408585-24408604 | None:intergenic | 50.0% |
| ! | TCAATGTTTGCTGCCGTTGC+AGG | + | chr4.2:24407353-24407372 | None:intergenic | 50.0% |
| ! | TGCCCGCTTTCTCCAAGTTT+TGG | + | chr4.2:24407515-24407534 | None:intergenic | 50.0% |
| !! | AGGTTGTTTCCGGCGAGTTT+TGG | + | chr4.2:24407484-24407503 | None:intergenic | 50.0% |
| !! | ATTGTCGAGGGAAAGGCACT+TGG | - | chr4.2:24409223-24409242 | MS.gene39618:CDS | 50.0% |
| !! | GAGGGAAAGGCACTTGGTTA+TGG | - | chr4.2:24409229-24409248 | MS.gene39618:CDS | 50.0% |
| AACACCGAGTCTTCGATCGC+TGG | + | chr4.2:24405446-24405465 | None:intergenic | 55.0% | |
| ACCGTGACTGTCTTAGTGGC+TGG | - | chr4.2:24409926-24409945 | MS.gene39618:intron | 55.0% | |
| ACTGCGTCCGAGTCTCTGTA+TGG | - | chr4.2:24408777-24408796 | MS.gene39618:intron | 55.0% | |
| CATTCTCCAAATGCGCTGCG+CGG | - | chr4.2:24407561-24407580 | MS.gene39618:intron | 55.0% | |
| CCCAGCCACTAAGACAGTCA+CGG | + | chr4.2:24409930-24409949 | None:intergenic | 55.0% | |
| CCCTTGGTATCTGTGGGTGA+AGG | - | chr4.2:24409035-24409054 | MS.gene39618:intron | 55.0% | |
| CCGTGACTGTCTTAGTGGCT+GGG | - | chr4.2:24409927-24409946 | MS.gene39618:intron | 55.0% | |
| CGCAGCGCATTTGGAGAATG+CGG | + | chr4.2:24407561-24407580 | None:intergenic | 55.0% | |
| CGCATTTGGAGAATGCGGAG+CGG | + | chr4.2:24407556-24407575 | None:intergenic | 55.0% | |
| CGTGACTGTCTTAGTGGCTG+GGG | - | chr4.2:24409928-24409947 | MS.gene39618:intron | 55.0% | |
| CTCTCTCTCCTGCAACTCGT+CGG | - | chr4.2:24407441-24407460 | MS.gene39618:intron | 55.0% | |
| CTTGCCAGCCATGGCTACTA+CGG | + | chr4.2:24405407-24405426 | None:intergenic | 55.0% | |
| GAGAGAGAGAGACAAGGAGG+AGG | + | chr4.2:24407402-24407421 | None:intergenic | 55.0% | |
| GAGTCTTCGATCGCTGGCAA+TGG | + | chr4.2:24405440-24405459 | None:intergenic | 55.0% | |
| GCAAAGCTGTCCTTCGTCGT+TGG | + | chr4.2:24407918-24407937 | None:intergenic | 55.0% | |
| GCATTTGGAGAATGCGGAGC+GGG | + | chr4.2:24407555-24407574 | None:intergenic | 55.0% | |
| GCCTTCACCCACAGATACCA+AGG | + | chr4.2:24409039-24409058 | None:intergenic | 55.0% | |
| GTCGTTGGGGCTCTGTGAAT+TGG | + | chr4.2:24407903-24407922 | None:intergenic | 55.0% | |
| GTGCCATCAACTCCCTGCAA+CGG | - | chr4.2:24407337-24407356 | MS.gene39618:intron | 55.0% | |
| GTTCCAGGGCATATCTCGGT+GGG | - | chr4.2:24409413-24409432 | MS.gene39618:intron | 55.0% | |
| TCACAGTCACAGCCTGTTGG+TGG | - | chr4.2:24407675-24407694 | MS.gene39618:intron | 55.0% | |
| TGCCCGTTAGGGTTGTTGAC+TGG | + | chr4.2:24407201-24407220 | None:intergenic | 55.0% | |
| TTACCCACCGAGATATGCCC+TGG | + | chr4.2:24409419-24409438 | None:intergenic | 55.0% | |
| ! | CAGCACTTGCTGGTCCTTAG+TGG | + | chr4.2:24409455-24409474 | None:intergenic | 55.0% |
| ! | GCCCGTTAGGGTTGTTGACT+GGG | + | chr4.2:24407200-24407219 | None:intergenic | 55.0% |
| ! | GGAAGAGCACACTTCGTTCC+AGG | - | chr4.2:24409398-24409417 | MS.gene39618:intron | 55.0% |
| ! | GGTTGTTTCCGACGAGTTGC+AGG | + | chr4.2:24407452-24407471 | None:intergenic | 55.0% |
| !! | AAGGCTTTAGAAGCGGCCAC+TGG | + | chr4.2:24407877-24407896 | None:intergenic | 55.0% |
| AAACCAGCACCACAGGGTGC+AGG | + | chr4.2:24409256-24409275 | None:intergenic | 60.0% | |
| AATGCGGAGCGGGTCGTTAG+CGG | + | chr4.2:24407545-24407564 | None:intergenic | 60.0% | |
| AGTGCCGTAGTAGCCATGGC+TGG | - | chr4.2:24405400-24405419 | MS.gene39618:CDS | 60.0% | |
| ATGTGTGTGTGTGTGGGGGG+CGG | + | chr4.2:24408408-24408427 | None:intergenic | 60.0% | |
| CGAGGAGCTGGTTGTAGGAG+AGG | - | chr4.2:24409154-24409173 | MS.gene39618:intron | 60.0% | |
| CGTTCCAGGGCATATCTCGG+TGG | - | chr4.2:24409412-24409431 | MS.gene39618:intron | 60.0% | |
| CTGCCGTTGCAGGGAGTTGA+TGG | + | chr4.2:24407343-24407362 | None:intergenic | 60.0% | |
| GACTGTCTTAGTGGCTGGGG+TGG | - | chr4.2:24409931-24409950 | MS.gene39618:intron | 60.0% | |
| GGGCAGAACTCAGCACTTGC+TGG | + | chr4.2:24409465-24409484 | None:intergenic | 60.0% | |
| GGTTATGGACCTGCACCCTG+TGG | - | chr4.2:24409244-24409263 | MS.gene39618:CDS | 60.0% | |
| TCACAGAGCCCCAACGACGA+AGG | - | chr4.2:24407905-24407924 | MS.gene39618:intron | 60.0% | |
| ! | TCAATGTGGTGGGGTGGGGT+GGG | + | chr4.2:24409201-24409220 | None:intergenic | 60.0% |
| ! | TTCAATGTGGTGGGGTGGGG+TGG | + | chr4.2:24409202-24409221 | None:intergenic | 60.0% |
| !! | CGGAAGTGCCGTAGTAGCCA+TGG | - | chr4.2:24405396-24405415 | MS.gene39618:CDS | 60.0% |
| ATGCGGAGCGGGTCGTTAGC+GGG | + | chr4.2:24407544-24407563 | None:intergenic | 65.0% | |
| TCTCCAAATGCGCTGCGCGG+TGG | - | chr4.2:24407564-24407583 | MS.gene39618:intron | 65.0% | |
| TGTGTGTGTGTGTGGGGGGC+GGG | + | chr4.2:24408407-24408426 | None:intergenic | 65.0% | |
| ! | CAATGTGGTGGGGTGGGGTG+GGG | + | chr4.2:24409200-24409219 | None:intergenic | 65.0% |
| ! | GCTGCGCGGTGGCGTAGTTT+TGG | - | chr4.2:24407575-24407594 | MS.gene39618:intron | 65.0% |
| ACGCCACCGCGCAGCGCATT+TGG | + | chr4.2:24407570-24407589 | None:intergenic | 70.0% | |
| GGACCTGCACCCTGTGGTGC+TGG | - | chr4.2:24409250-24409269 | MS.gene39618:CDS | 70.0% | |
| GTGTGTGTGTGTGGGGGGCG+GGG | + | chr4.2:24408406-24408425 | None:intergenic | 70.0% | |
| AGCGCTATCGCGGCGCGGAG+CGG | + | chr4.2:24407601-24407620 | None:intergenic | 75.0% | |
| CTCCCAGCGCTATCGCGGCG+CGG | + | chr4.2:24407606-24407625 | None:intergenic | 75.0% | |
| CTCCGCGCCGCGATAGCGCT+GGG | - | chr4.2:24407601-24407620 | MS.gene39618:intron | 75.0% | |
| GGCCGCTCCCAGCGCTATCG+CGG | + | chr4.2:24407611-24407630 | None:intergenic | 75.0% | |
| GGGGTGGGGTGGGGTGGAGT+GGG | + | chr4.2:24409191-24409210 | None:intergenic | 75.0% | |
| GGGTGGGGTGGGGTGGAGTG+GGG | + | chr4.2:24409190-24409209 | None:intergenic | 75.0% | |
| GGTGGGGTGGGGTGGAGTGG+GGG | + | chr4.2:24409189-24409208 | None:intergenic | 75.0% | |
| GTGGGGTGGGGTGGAGTGGG+GGG | + | chr4.2:24409188-24409207 | None:intergenic | 75.0% | |
| TGGGGTGGGGTGGGGTGGAG+TGG | + | chr4.2:24409192-24409211 | None:intergenic | 75.0% | |
| TGTGTGTGGGGGGCGGGGCA+GGG | + | chr4.2:24408401-24408420 | None:intergenic | 75.0% | |
| ! | CGCCGCGATAGCGCTGGGAG+CGG | - | chr4.2:24407606-24407625 | MS.gene39618:intron | 75.0% |
| ! | TGTGGTGGGGTGGGGTGGGG+TGG | + | chr4.2:24409197-24409216 | None:intergenic | 75.0% |
| ! | GCTCCGCGCCGCGATAGCGC+TGG | - | chr4.2:24407600-24407619 | MS.gene39618:intron | 80.0% |
| ! | GTGTGTGTGGGGGGCGGGGC+AGG | + | chr4.2:24408402-24408421 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 24405373 | 24410584 | 24405373 | ID=MS.gene39618 |
| chr4.2 | mRNA | 24405373 | 24410584 | 24405373 | ID=MS.gene39618.t1;Parent=MS.gene39618 |
| chr4.2 | exon | 24410394 | 24410584 | 24410394 | ID=MS.gene39618.t1.exon1;Parent=MS.gene39618.t1 |
| chr4.2 | CDS | 24410394 | 24410584 | 24410394 | ID=cds.MS.gene39618.t1;Parent=MS.gene39618.t1 |
| chr4.2 | exon | 24410201 | 24410308 | 24410201 | ID=MS.gene39618.t1.exon2;Parent=MS.gene39618.t1 |
| chr4.2 | CDS | 24410201 | 24410308 | 24410201 | ID=cds.MS.gene39618.t1;Parent=MS.gene39618.t1 |
| chr4.2 | exon | 24409206 | 24409295 | 24409206 | ID=MS.gene39618.t1.exon3;Parent=MS.gene39618.t1 |
| chr4.2 | CDS | 24409206 | 24409295 | 24409206 | ID=cds.MS.gene39618.t1;Parent=MS.gene39618.t1 |
| chr4.2 | exon | 24407127 | 24407211 | 24407127 | ID=MS.gene39618.t1.exon4;Parent=MS.gene39618.t1 |
| chr4.2 | CDS | 24407127 | 24407211 | 24407127 | ID=cds.MS.gene39618.t1;Parent=MS.gene39618.t1 |
| chr4.2 | exon | 24405989 | 24406083 | 24405989 | ID=MS.gene39618.t1.exon5;Parent=MS.gene39618.t1 |
| chr4.2 | CDS | 24405989 | 24406083 | 24405989 | ID=cds.MS.gene39618.t1;Parent=MS.gene39618.t1 |
| chr4.2 | exon | 24405373 | 24405421 | 24405373 | ID=MS.gene39618.t1.exon6;Parent=MS.gene39618.t1 |
| chr4.2 | CDS | 24405373 | 24405421 | 24405373 | ID=cds.MS.gene39618.t1;Parent=MS.gene39618.t1 |
| Gene Sequence |
| Protein sequence |
