AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060216

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060216.t1 MTR_2g075870 97.854 466 10 0 1 466 1 466 0.0 938
MS.gene060216.t1 MTR_2g069440 94.635 466 25 0 1 466 1 466 0.0 913
MS.gene060216.t1 MTR_2g069440 94.635 466 25 0 1 466 178 643 0.0 912
MS.gene060216.t1 MTR_2g021300 25.613 367 195 15 33 377 51 361 9.16e-16 79.7
MS.gene060216.t1 MTR_7g094460 26.144 306 133 12 33 304 64 310 9.82e-15 76.6
MS.gene060216.t1 MTR_3g076660 26.690 281 151 10 29 288 89 335 6.67e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060216.t1 AT1G04170 89.677 465 47 1 1 464 1 465 0.0 864
MS.gene060216.t1 AT1G04170 89.677 465 47 1 1 464 1 465 0.0 864
MS.gene060216.t1 AT4G18330 81.128 461 87 0 4 464 11 471 0.0 778
MS.gene060216.t1 AT2G18720 75.966 466 109 2 1 465 6 469 0.0 741
MS.gene060216.t1 AT2G18720 75.966 466 109 2 1 465 6 469 0.0 741
MS.gene060216.t1 AT2G18720 73.333 375 100 0 91 465 4 378 0.0 584
MS.gene060216.t1 AT4G18330 83.942 274 44 0 4 277 11 284 7.80e-171 481
MS.gene060216.t1 AT4G20360 25.134 374 202 12 29 377 76 396 4.26e-16 80.9
MS.gene060216.t1 AT4G20360 25.134 374 202 12 29 377 76 396 4.26e-16 80.9
MS.gene060216.t1 AT4G02930 24.834 451 248 17 33 456 68 454 7.83e-16 80.1

Find 118 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTGCTTCGACGGCTTCT+TGG 0.227091 2.3:-21003991 MS.gene060216:CDS
ACAAAGTTCCTTTCAGGAAT+TGG 0.238376 2.3:+21005401 None:intergenic
TACTTCAATTGGGCAGAAAT+AGG 0.280759 2.3:+21005464 None:intergenic
TTTGAGGTTGATGAAATAAA+AGG 0.284513 2.3:-21005326 MS.gene060216:CDS
CATCAATATTATACTTCAAT+TGG 0.293082 2.3:+21005453 None:intergenic
GGGAAAACAAAGTTCCTTTC+AGG 0.294948 2.3:+21005395 None:intergenic
TAGCCACATTCTCTTGAATT+AGG 0.296529 2.3:+21005633 None:intergenic
CAAAGTTCCTTTCAGGAATT+GGG 0.301901 2.3:+21005402 None:intergenic
CAGGTCGAACTTCAATGAAT+TGG 0.308904 2.3:+21004741 None:intergenic
TTGATCCTATGTTCAACATT+AGG 0.313887 2.3:+21003908 None:intergenic
AACAGTTGTGAAAGCAATAT+CGG 0.323037 2.3:-21007142 MS.gene060216:CDS
GGGCATGTTCTTGGAGAGGT+TGG 0.336207 2.3:-21004551 MS.gene060216:CDS
AGAAGCATTGGCGTCTTATT+GGG 0.344993 2.3:-21003774 MS.gene060216:CDS
TAAATCCTGGCAGGCACTAT+TGG 0.345746 2.3:-21007186 MS.gene060216:intron
CGTCAGGCTACCATTAATAT+TGG 0.353177 2.3:-21007372 MS.gene060216:intron
TTGTTGTTCCGACACCAATT+AGG 0.355074 2.3:+21004609 None:intergenic
GAGAAGCATTGGCGTCTTAT+TGG 0.356109 2.3:-21003775 MS.gene060216:CDS
TGCTCAGAGGTTTGTGGTTG+TGG 0.359183 2.3:+21005716 None:intergenic
GACCGAATTACTATCATATT+AGG 0.365157 2.3:+21005371 None:intergenic
GAAAGCAATATCGGGTGTTC+AGG 0.391068 2.3:-21007133 MS.gene060216:intron
TCATCTTTAACAACTATTCC+AGG 0.391794 2.3:+21004722 None:intergenic
GGATATATTACCAATATTAA+TGG 0.393305 2.3:+21007362 None:intergenic
GCTGTGCCGGGAGGCCTAAT+TGG 0.393438 2.3:-21004623 MS.gene060216:CDS
AGGTTGGTGGGGCATGTTCT+TGG 0.401821 2.3:-21004560 MS.gene060216:CDS
GCCTGACGAGATATGACTTC+AGG 0.405495 2.3:+21007387 None:intergenic
AATGTCGCGGAAGGGTTTGA+TGG 0.406699 2.3:-21007457 MS.gene060216:CDS
CATCTCCTGTGTGCACTAGC+AGG 0.410476 2.3:-21003828 MS.gene060216:CDS
GAAACTATTCTAGAATATAT+AGG 0.435912 2.3:+21004677 None:intergenic
CTTCTTGGTGTCCGAACAAA+AGG 0.435986 2.3:-21003976 MS.gene060216:CDS
GGCATGTTCTTGGAGAGGTT+GGG 0.438180 2.3:-21004550 MS.gene060216:CDS
ATCAATATTATACTTCAATT+GGG 0.441253 2.3:+21005454 None:intergenic
TGAGCTTCAATTTGCTGTGC+CGG 0.441280 2.3:-21004636 MS.gene060216:CDS
TGCTACAGGGCTTATGGAAG+TGG 0.442307 2.3:-21006384 MS.gene060216:intron
CACCTAATATGATAGTAATT+CGG 0.442634 2.3:-21005373 MS.gene060216:CDS
TCCTGAAGTCATATCTCGTC+AGG 0.444041 2.3:-21007388 MS.gene060216:CDS
GTCTGTCTTCAATTCAAGAT+GGG 0.451192 2.3:+21003706 None:intergenic
TGTCTGTCTTCAATTCAAGA+TGG 0.453511 2.3:+21003705 None:intergenic
AACAAAAGGATCTGAGAGAC+AGG 0.456763 2.3:-21003962 MS.gene060216:CDS
ATCTCCTGTGTGCACTAGCA+GGG 0.458729 2.3:-21003827 MS.gene060216:CDS
GCTCAATGGAGCAGCTATCA+TGG 0.471696 2.3:-21005777 MS.gene060216:CDS
CACTTGTAGCTCATAGGCCT+TGG 0.472231 2.3:+21006483 None:intergenic
ACAGGGAAAGGTAGCTAAGC+TGG 0.474551 2.3:-21003944 MS.gene060216:CDS
CCACTTTGACGCGTGCCGAC+AGG 0.479952 2.3:-21004580 MS.gene060216:CDS
AACATAGGATCAATGTCAAC+TGG 0.480720 2.3:-21003898 MS.gene060216:CDS
CTCTGAGCATTTAGCTGCTG+TGG 0.483211 2.3:-21005702 MS.gene060216:CDS
CTCATGGCTACAATGCTCAA+TGG 0.488462 2.3:-21005791 MS.gene060216:CDS
GACGCGTGCCGACAGGTTGG+TGG 0.494213 2.3:-21004573 MS.gene060216:CDS
AATACCCACTTGTAGCTCAT+AGG 0.503100 2.3:+21006477 None:intergenic
GCTAAATGCTCAGAGGTTTG+TGG 0.504185 2.3:+21005710 None:intergenic
GCATTGGCGTCTTATTGGGT+GGG 0.505868 2.3:-21003770 MS.gene060216:CDS
TCCTTTGATGTCAATAAACC+TGG 0.505998 2.3:-21005350 MS.gene060216:CDS
GAAATAAAAGGAGGTGTAGC+TGG 0.506344 2.3:-21005314 MS.gene060216:CDS
TTAGGTCGACCTTGTTCTGA+AGG 0.508067 2.3:+21005651 None:intergenic
CAATTCATTGAAGTTCGACC+TGG 0.511871 2.3:-21004740 MS.gene060216:CDS
CTTCGAGAGTGATTCCAGCT+TGG 0.513972 2.3:+21003740 None:intergenic
CATTGGCGTCTTATTGGGTG+GGG 0.515237 2.3:-21003769 MS.gene060216:CDS
GGTGGGGCATGTTCTTGGAG+AGG 0.519711 2.3:-21004555 MS.gene060216:CDS
GAGCTTCAATTTGCTGTGCC+GGG 0.522076 2.3:-21004635 MS.gene060216:CDS
AGCATTGGCGTCTTATTGGG+TGG 0.522787 2.3:-21003771 MS.gene060216:CDS
CTTCAATTCAAGATGGGTGC+AGG 0.524219 2.3:+21003712 None:intergenic
ACGCGTGCCGACAGGTTGGT+GGG 0.526189 2.3:-21004572 MS.gene060216:CDS
AATCCTATGTGTGATGTGGC+AGG 0.530907 2.3:-21006351 MS.gene060216:CDS
CGAATTACTATCATATTAGG+TGG 0.532387 2.3:+21005374 None:intergenic
GAGGTTGATGAAATAAAAGG+AGG 0.539514 2.3:-21005323 MS.gene060216:CDS
GGAACAAGACTTGAGTAAGT+TGG 0.541032 2.3:-21007436 MS.gene060216:CDS
CGCGTGCCGACAGGTTGGTG+GGG 0.543652 2.3:-21004571 MS.gene060216:CDS
CCTGTCGGCACGCGTCAAAG+TGG 0.546417 2.3:+21004580 None:intergenic
CGTAACATTACAATCAAGCT+TGG 0.546849 2.3:-21006549 MS.gene060216:CDS
AGAGGTTGGGTCACTGCCTG+AGG 0.547845 2.3:-21004537 MS.gene060216:CDS
GATATGACTTCAGGAGAAAG+TGG 0.552960 2.3:+21007396 None:intergenic
ACAGTTGTGAAAGCAATATC+GGG 0.560499 2.3:-21007141 MS.gene060216:CDS
GAAATCCTAATGTTGAACAT+AGG 0.560575 2.3:-21003913 MS.gene060216:CDS
GGCAGGCACTATTGGTCATG+TGG 0.561562 2.3:-21007178 MS.gene060216:intron
GGAATAGTTGTTAAAGATGA+GGG 0.564225 2.3:-21004719 MS.gene060216:CDS
TGGGCAGAAATAGGTACCAC+TGG 0.566147 2.3:+21005473 None:intergenic
ACCAGGTTTATTGACATCAA+AGG 0.567010 2.3:+21005349 None:intergenic
GTCGACGTGTTGAGAAGCAT+TGG 0.567670 2.3:-21003786 MS.gene060216:CDS
CCGACACCAATTAGGCCTCC+CGG 0.569827 2.3:+21004617 None:intergenic
CCGGGAGGCCTAATTGGTGT+CGG 0.573037 2.3:-21004617 MS.gene060216:CDS
ATTTCATCAACCTCAAAACC+AGG 0.574232 2.3:+21005332 None:intergenic
TGGAATAGTTGTTAAAGATG+AGG 0.574258 2.3:-21004720 MS.gene060216:CDS
CAATTCAAGATGGGTGCAGG+AGG 0.575025 2.3:+21003715 None:intergenic
TCAAGCTCAACGAAAACCTC+AGG 0.582061 2.3:+21004521 None:intergenic
AATGGAGCAGCTATCATGGA+TGG 0.583493 2.3:-21005773 MS.gene060216:CDS
GGGTGGGGTCAAATCCAAGC+TGG 0.588972 2.3:-21003754 MS.gene060216:CDS
AGAAGCCAAAATGTCGCGGA+AGG 0.592195 2.3:-21007466 None:intergenic
TAGCTGGTGGAAGCATTCTG+AGG 0.592950 2.3:-21005298 MS.gene060216:CDS
TACCAGGGAACAGTCGCTGA+TGG 0.596510 2.3:-21005500 MS.gene060216:intron
CATCATAATCCTTCAGAACA+AGG 0.597678 2.3:-21005660 MS.gene060216:CDS
ACAGGGTCATGATATTCTCA+TGG 0.607529 2.3:-21005807 MS.gene060216:intron
CTGTCGGCACGCGTCAAAGT+GGG 0.607686 2.3:+21004581 None:intergenic
AATTGGTGTCGGAACAACAA+TGG 0.607943 2.3:-21004606 MS.gene060216:CDS
GTGAAGATGAACGATGTCCA+AGG 0.609977 2.3:-21006500 MS.gene060216:CDS
CGACCTAATTCAAGAGAATG+TGG 0.610865 2.3:-21005636 MS.gene060216:CDS
CTTCAATTTGCTGTGCCGGG+AGG 0.612045 2.3:-21004632 MS.gene060216:CDS
ACTATTGGTCATGTGGCACA+TGG 0.612937 2.3:-21007171 MS.gene060216:CDS
AAAAGATCCCAATTCCTGAA+AGG 0.613540 2.3:-21005409 MS.gene060216:CDS
AGGATCTGAGAGACAGGGAA+AGG 0.618070 2.3:-21003956 MS.gene060216:CDS
CACAGCAGCTAAATGCTCAG+AGG 0.622432 2.3:+21005703 None:intergenic
GAATTACTATCATATTAGGT+GGG 0.622613 2.3:+21005375 None:intergenic
ATCCTATGTGTGATGTGGCA+GGG 0.627653 2.3:-21006350 MS.gene060216:CDS
AACATGCCCCACCAACCTGT+CGG 0.630024 2.3:+21004565 None:intergenic
TCTCCTGTGTGCACTAGCAG+GGG 0.633045 2.3:-21003826 MS.gene060216:CDS
ATAGTTGTTAAAGATGAGGG+TGG 0.633133 2.3:-21004716 MS.gene060216:CDS
TTTGACGCGTGCCGACAGGT+TGG 0.635393 2.3:-21004576 MS.gene060216:CDS
AGTCGCTGATGGTGCACCAG+TGG 0.639003 2.3:-21005489 MS.gene060216:CDS
ATAAAAGGAGGTGTAGCTGG+TGG 0.641474 2.3:-21005311 MS.gene060216:CDS
AACTGCTGTGAGGAATGACT+TGG 0.643836 2.3:-21003866 MS.gene060216:CDS
AACCCTGCCACATCACACAT+AGG 0.646253 2.3:+21006348 None:intergenic
AATTCAAGATGGGTGCAGGA+GGG 0.649742 2.3:+21003716 None:intergenic
AGCTGGTGGAAGCATTCTGA+GGG 0.657390 2.3:-21005297 MS.gene060216:intron
TGGAAGAAGCCAAAATGTCG+CGG 0.666817 2.3:-21007470 None:intergenic
ACAAAAGGATCTGAGAGACA+GGG 0.668642 2.3:-21003961 MS.gene060216:CDS
GAAGCCAAAATGTCGCGGAA+GGG 0.668690 2.3:-21007465 None:intergenic
TCACCCCTGCTAGTGCACAC+AGG 0.674579 2.3:+21003823 None:intergenic
ACTGCAAGATGAAATTGCTG+AGG 0.683174 2.3:-21006320 MS.gene060216:CDS
AGATAATCCTATGTGTGATG+TGG 0.688242 2.3:-21006355 MS.gene060216:CDS
GTGCGAAAGTAACTGCTGTG+AGG 0.738351 2.3:-21003876 MS.gene060216:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATTTTTTCATAGATA+GGG - chr2.3:21004346-21004365 MS.gene060216:intron 10.0%
!!! TTAAATTTTAAATTTAATGC+AGG - chr2.3:21004950-21004969 MS.gene060216:intron 10.0%
!! ATCAATATTATACTTCAATT+GGG + chr2.3:21005719-21005738 None:intergenic 15.0%
!! ATGAATAAAAAATTAAATCC+TGG - chr2.3:21003971-21003990 MS.gene060216:CDS 15.0%
!! GCATAAAATTATAAATCATT+AGG + chr2.3:21006689-21006708 None:intergenic 15.0%
!! TATTGTATATATGTTATTCT+TGG - chr2.3:21004125-21004144 MS.gene060216:intron 15.0%
!! TTCCAAAATTCAAATTTATT+AGG + chr2.3:21005983-21006002 None:intergenic 15.0%
!!! GATTTTATTTTTTCATAGAT+AGG - chr2.3:21004345-21004364 MS.gene060216:intron 15.0%
!!! GTTTTGTTAATTTCAATATT+TGG - chr2.3:21004323-21004342 MS.gene060216:intron 15.0%
!!! TTCCTAATAAATTTGAATTT+TGG - chr2.3:21005978-21005997 MS.gene060216:intron 15.0%
!! ATTCAATTGATCTAAATGTT+AGG + chr2.3:21004430-21004449 None:intergenic 20.0%
!! CATCAATATTATACTTCAAT+TGG + chr2.3:21005720-21005739 None:intergenic 20.0%
!! GGATATATTACCAATATTAA+TGG + chr2.3:21003811-21003830 None:intergenic 20.0%
!! TCAGATATAGTAGATAATAT+AGG + chr2.3:21005153-21005172 None:intergenic 20.0%
!!! AGCATAGATTAAACATTTTA+AGG + chr2.3:21006068-21006087 None:intergenic 20.0%
!!! ATTTTTTGTTTTTTGCTACA+GGG - chr2.3:21004773-21004792 MS.gene060216:intron 20.0%
!!! GAAACTATTCTAGAATATAT+AGG + chr2.3:21006496-21006515 None:intergenic 20.0%
!!! GAACTTTCATTTTTTGTTTA+AGG - chr2.3:21004907-21004926 MS.gene060216:intron 20.0%
!!! GTAAATCTTTTTTTCAAAAC+TGG + chr2.3:21004475-21004494 None:intergenic 20.0%
!!! TATTTTTTGTTTTTTGCTAC+AGG - chr2.3:21004772-21004791 MS.gene060216:intron 20.0%
!!! TTTTGTTTAAGGTTGTTTTA+TGG - chr2.3:21004918-21004937 MS.gene060216:intron 20.0%
! AACAAAACTTCATAAGTCTA+TGG + chr2.3:21004311-21004330 None:intergenic 25.0%
! AAGAATATAATGTGGTACTA+TGG + chr2.3:21004504-21004523 None:intergenic 25.0%
! AATGCACAAAGAATATAATG+TGG + chr2.3:21004512-21004531 None:intergenic 25.0%
! ATAAAAAATTAAATCCTGGC+AGG - chr2.3:21003975-21003994 MS.gene060216:CDS 25.0%
! ATGAATATAAAAAAGCTCGA+GGG + chr2.3:21004536-21004555 None:intergenic 25.0%
! CACCTAATATGATAGTAATT+CGG - chr2.3:21005797-21005816 MS.gene060216:CDS 25.0%
! CTGATTGATGTTATATTATC+AGG - chr2.3:21004722-21004741 MS.gene060216:CDS 25.0%
! CTTAACGAACATACATATAT+AGG - chr2.3:21005104-21005123 MS.gene060216:intron 25.0%
! GAATTACTATCATATTAGGT+GGG + chr2.3:21005798-21005817 None:intergenic 25.0%
! GAGAGAAAATAAAATTTGGA+TGG + chr2.3:21005018-21005037 None:intergenic 25.0%
! TAGGGAGAGAAAATAAAATT+TGG + chr2.3:21005022-21005041 None:intergenic 25.0%
! TTATGGAATCCATAAAAAAG+TGG - chr2.3:21004395-21004414 MS.gene060216:intron 25.0%
!! AATAAAGATTTTGAGCATTC+CGG + chr2.3:21007122-21007141 None:intergenic 25.0%
!! ATTTACATGAGTTTTGCATT+TGG - chr2.3:21007139-21007158 MS.gene060216:CDS 25.0%
!! TATCAGGTTATTTCAACTAT+TGG - chr2.3:21004738-21004757 MS.gene060216:CDS 25.0%
!!! AAGTAAACTATGGTTTGTTA+TGG + chr2.3:21007048-21007067 None:intergenic 25.0%
!!! ACACTTGTATATTTTAGCAT+TGG + chr2.3:21004652-21004671 None:intergenic 25.0%
!!! ACTGCTTTTAGATAAAAACA+CGG + chr2.3:21006266-21006285 None:intergenic 25.0%
!!! AGAAGATAACCACTTTTTTA+TGG + chr2.3:21004407-21004426 None:intergenic 25.0%
!!! CATTGCAACTTTTTTGTTTT+TGG - chr2.3:21006159-21006178 MS.gene060216:intron 25.0%
!!! GTTATTTTGGAAAATTGCAA+AGG + chr2.3:21006192-21006211 None:intergenic 25.0%
!!! GTTCTAGTTTGGAAATAAAA+TGG + chr2.3:21006225-21006244 None:intergenic 25.0%
!!! TGGAGTTTTTCAAGTTATTT+TGG + chr2.3:21006205-21006224 None:intergenic 25.0%
!!! TTTGAGGTTGATGAAATAAA+AGG - chr2.3:21005844-21005863 MS.gene060216:intron 25.0%
AAACCAAGCATATTAATGGT+AGG + chr2.3:21006727-21006746 None:intergenic 30.0%
AAATTGGATGGTATAATTGC+AGG + chr2.3:21007000-21007019 None:intergenic 30.0%
AACAGTTGTGAAAGCAATAT+CGG - chr2.3:21004028-21004047 MS.gene060216:intron 30.0%
AATACCAACCTGAGATTTAA+TGG + chr2.3:21006850-21006869 None:intergenic 30.0%
ACAAATCACCTACATCTAAA+TGG + chr2.3:21004186-21004205 None:intergenic 30.0%
AGAATTGGGAGATAATGTAA+TGG + chr2.3:21005045-21005064 None:intergenic 30.0%
ATATGATTGAACCCCAAAAA+GGG + chr2.3:21003835-21003854 None:intergenic 30.0%
CATGAATATAAAAAAGCTCG+AGG + chr2.3:21004537-21004556 None:intergenic 30.0%
CGAATTACTATCATATTAGG+TGG + chr2.3:21005799-21005818 None:intergenic 30.0%
CTAACAATAACAGTCATCAA+TGG + chr2.3:21003944-21003963 None:intergenic 30.0%
GAAATCCTAATGTTGAACAT+AGG - chr2.3:21007257-21007276 MS.gene060216:intron 30.0%
GACCGAATTACTATCATATT+AGG + chr2.3:21005802-21005821 None:intergenic 30.0%
GGAAAGAGTAAAGTAAACTA+TGG + chr2.3:21007058-21007077 None:intergenic 30.0%
GGAATAGTTGTTAAAGATGA+GGG - chr2.3:21006451-21006470 MS.gene060216:intron 30.0%
TATAGCTACGTTCATTTGAT+TGG - chr2.3:21004371-21004390 MS.gene060216:intron 30.0%
TATATGTTATTCTTGGCACA+TGG - chr2.3:21004132-21004151 MS.gene060216:intron 30.0%
TATTTCCAAACTAGAACGAA+GGG - chr2.3:21006228-21006247 MS.gene060216:intron 30.0%
TCATCTTTAACAACTATTCC+AGG + chr2.3:21006451-21006470 None:intergenic 30.0%
TCTGACTAAGATTAACTCAT+AGG - chr2.3:21005168-21005187 MS.gene060216:intron 30.0%
TGCAATGTTTCTCATATGTT+GGG + chr2.3:21006146-21006165 None:intergenic 30.0%
TGGAATAGTTGTTAAAGATG+AGG - chr2.3:21006450-21006469 MS.gene060216:intron 30.0%
TTATTTCCAAACTAGAACGA+AGG - chr2.3:21006227-21006246 MS.gene060216:intron 30.0%
TTGATCCTATGTTCAACATT+AGG + chr2.3:21007265-21007284 None:intergenic 30.0%
TTGCAATGTTTCTCATATGT+TGG + chr2.3:21006147-21006166 None:intergenic 30.0%
TTTATCAGCCATTAAATCTC+AGG - chr2.3:21006839-21006858 MS.gene060216:intron 30.0%
! AACTCATAGGATAAGTTTTG+CGG - chr2.3:21005181-21005200 MS.gene060216:intron 30.0%
! AATCTTTGAAAATATTGCCG+AGG - chr2.3:21006097-21006116 MS.gene060216:intron 30.0%
! ATAAAGATTTTGAGCATTCC+GGG + chr2.3:21007121-21007140 None:intergenic 30.0%
! ATCTTTGAAAATATTGCCGA+GGG - chr2.3:21006098-21006117 MS.gene060216:intron 30.0%
! ATGAAAGTTCAGAGTTTTAC+CGG + chr2.3:21004897-21004916 None:intergenic 30.0%
! GTAATATATCCTCCCTTTTT+GGG - chr2.3:21003820-21003839 MS.gene060216:CDS 30.0%
! TAATATATCCTCCCTTTTTG+GGG - chr2.3:21003821-21003840 MS.gene060216:CDS 30.0%
!! ACGTTCATTTGATTGGTTTA+TGG - chr2.3:21004378-21004397 MS.gene060216:intron 30.0%
!! GATTTGACTATTCTAAAGTG+AGG + chr2.3:21007079-21007098 None:intergenic 30.0%
!! GTGATTTGTTTCAAGTAGAA+AGG - chr2.3:21004197-21004216 MS.gene060216:intron 30.0%
!! TAAACTTTTTCTTGCTTCGA+CGG - chr2.3:21007171-21007190 MS.gene060216:CDS 30.0%
AAAACTGGAGATGCAAAAAC+AGG + chr2.3:21004460-21004479 None:intergenic 35.0%
AAAAGATCCCAATTCCTGAA+AGG - chr2.3:21005761-21005780 MS.gene060216:CDS 35.0%
AAACTGGAGATGCAAAAACA+GGG + chr2.3:21004459-21004478 None:intergenic 35.0%
AACATAGGATCAATGTCAAC+TGG - chr2.3:21007272-21007291 MS.gene060216:intron 35.0%
ACAAAGTTCCTTTCAGGAAT+TGG + chr2.3:21005772-21005791 None:intergenic 35.0%
ACAGTTGTGAAAGCAATATC+GGG - chr2.3:21004029-21004048 MS.gene060216:intron 35.0%
ACCAGGTTTATTGACATCAA+AGG + chr2.3:21005824-21005843 None:intergenic 35.0%
AGATAATCCTATGTGTGATG+TGG - chr2.3:21004815-21004834 MS.gene060216:intron 35.0%
ATAGTTGTTAAAGATGAGGG+TGG - chr2.3:21006454-21006473 MS.gene060216:intron 35.0%
ATTTCATCAACCTCAAAACC+AGG + chr2.3:21005841-21005860 None:intergenic 35.0%
CAAAGTTCCTTTCAGGAATT+GGG + chr2.3:21005771-21005790 None:intergenic 35.0%
CATATGACAACTTCTTTGCA+GGG - chr2.3:21006391-21006410 MS.gene060216:intron 35.0%
CATCATAATCCTTCAGAACA+AGG - chr2.3:21005510-21005529 MS.gene060216:intron 35.0%
CGTAACATTACAATCAAGCT+TGG - chr2.3:21004621-21004640 MS.gene060216:CDS 35.0%
CGTGAAACCAAGCATATTAA+TGG + chr2.3:21006731-21006750 None:intergenic 35.0%
GATATGATTGAACCCCAAAA+AGG + chr2.3:21003836-21003855 None:intergenic 35.0%
TACTTCAATTGGGCAGAAAT+AGG + chr2.3:21005709-21005728 None:intergenic 35.0%
TAGCCACATTCTCTTGAATT+AGG + chr2.3:21005540-21005559 None:intergenic 35.0%
TCCTTTGATGTCAATAAACC+TGG - chr2.3:21005820-21005839 MS.gene060216:intron 35.0%
TGATCGATCCATTTAGATGT+AGG - chr2.3:21004175-21004194 MS.gene060216:intron 35.0%
TGGGAGATAATGTAATGGTA+GGG + chr2.3:21005040-21005059 None:intergenic 35.0%
TGTGCGTTTCAAAAATGAGT+TGG - chr2.3:21004596-21004615 MS.gene060216:CDS 35.0%
TTACTGATACACCTACTTGT+TGG - chr2.3:21005645-21005664 MS.gene060216:CDS 35.0%
TTCCCGGGATTAAAAGAATT+GGG + chr2.3:21005059-21005078 None:intergenic 35.0%
TTGGGAGATAATGTAATGGT+AGG + chr2.3:21005041-21005060 None:intergenic 35.0%
! CATTAAGCAGTGTCGTTAAA+TGG + chr2.3:21005300-21005319 None:intergenic 35.0%
! GGTAATATATCCTCCCTTTT+TGG - chr2.3:21003819-21003838 MS.gene060216:CDS 35.0%
! TCTCCCAATTCTTTTAATCC+CGG - chr2.3:21005053-21005072 MS.gene060216:intron 35.0%
! TGAAAGTTCAGAGTTTTACC+GGG + chr2.3:21004896-21004915 None:intergenic 35.0%
! TTACCTTTTCAATTGCCACA+GGG - chr2.3:21005346-21005365 MS.gene060216:CDS 35.0%
! TTTACCTTTTCAATTGCCAC+AGG - chr2.3:21005345-21005364 MS.gene060216:CDS 35.0%
!! CTCTACATTTGTTGTGTGTA+GGG - chr2.3:21004083-21004102 MS.gene060216:intron 35.0%
!! GAGGTTGATGAAATAAAAGG+AGG - chr2.3:21005847-21005866 MS.gene060216:intron 35.0%
!! TCTACATTTGTTGTGTGTAG+GGG - chr2.3:21004084-21004103 MS.gene060216:intron 35.0%
!! TTCACTTTTACTTGCCAATC+TGG - chr2.3:21006771-21006790 MS.gene060216:intron 35.0%
!!! GAAGTAAGTTTTTTGCGAAG+AGG - chr2.3:21005592-21005611 MS.gene060216:intron 35.0%
!!! GATGAATTTTCAAGTGACAG+AGG - chr2.3:21006299-21006318 MS.gene060216:CDS 35.0%
!!! TGTCAATAAACCTGGTTTTG+AGG - chr2.3:21005828-21005847 MS.gene060216:intron 35.0%
AACAAAAGGATCTGAGAGAC+AGG - chr2.3:21007208-21007227 MS.gene060216:intron 40.0%
AATACCCACTTGTAGCTCAT+AGG + chr2.3:21004696-21004715 None:intergenic 40.0%
AATCGTGAGTCTATGCAAGT+TGG - chr2.3:21006897-21006916 MS.gene060216:intron 40.0%
ACAAAAGGATCTGAGAGACA+GGG - chr2.3:21007209-21007228 MS.gene060216:intron 40.0%
ACAGGGTCATGATATTCTCA+TGG - chr2.3:21005363-21005382 MS.gene060216:CDS 40.0%
ACGTTTGCAGTATCGCAAAT+TGG + chr2.3:21007016-21007035 None:intergenic 40.0%
ACTGCAAGATGAAATTGCTG+AGG - chr2.3:21004850-21004869 MS.gene060216:intron 40.0%
ATCGTGAGTCTATGCAAGTT+GGG - chr2.3:21006898-21006917 MS.gene060216:intron 40.0%
ATGAGAATATCATGACCCTG+TGG + chr2.3:21005364-21005383 None:intergenic 40.0%
CAAGCATATTAATGGTAGGC+AGG + chr2.3:21006723-21006742 None:intergenic 40.0%
CAATTCATTGAAGTTCGACC+TGG - chr2.3:21006430-21006449 MS.gene060216:intron 40.0%
CAGGTCGAACTTCAATGAAT+TGG + chr2.3:21006432-21006451 None:intergenic 40.0%
CCATACCATGATACCTCTTA+TGG - chr2.3:21005271-21005290 MS.gene060216:intron 40.0%
CCTACACACAACAAATGTAG+AGG + chr2.3:21004085-21004104 None:intergenic 40.0%
CGACCTAATTCAAGAGAATG+TGG - chr2.3:21005534-21005553 MS.gene060216:intron 40.0%
CGTCAGGCTACCATTAATAT+TGG - chr2.3:21003798-21003817 MS.gene060216:CDS 40.0%
CTGCCTACCATTAATATGCT+TGG - chr2.3:21006721-21006740 MS.gene060216:intron 40.0%
CTTCCCGGGATTAAAAGAAT+TGG + chr2.3:21005060-21005079 None:intergenic 40.0%
GATATGACTTCAGGAGAAAG+TGG + chr2.3:21003777-21003796 None:intergenic 40.0%
GCATATGACAACTTCTTTGC+AGG - chr2.3:21006390-21006409 MS.gene060216:intron 40.0%
GGAACAAGACTTGAGTAAGT+TGG - chr2.3:21003734-21003753 MS.gene060216:CDS 40.0%
GGGAAAACAAAGTTCCTTTC+AGG + chr2.3:21005778-21005797 None:intergenic 40.0%
TCAGAAGCTTCATAACTCAC+AGG + chr2.3:21004277-21004296 None:intergenic 40.0%
TCAGCCATTAAATCTCAGGT+TGG - chr2.3:21006843-21006862 MS.gene060216:intron 40.0%
TCTTTCTTGTGCGAGATCAT+TGG + chr2.3:21006959-21006978 None:intergenic 40.0%
TTCATAACTCACAGGCTGTT+TGG + chr2.3:21004269-21004288 None:intergenic 40.0%
TTGCAGTATCGCAAATTGGA+TGG + chr2.3:21007012-21007031 None:intergenic 40.0%
TTTACATTCACTCAGCTTCC+CGG - chr2.3:21007100-21007119 MS.gene060216:intron 40.0%
! ATTCTTGGCACATGGTGTTT+TGG - chr2.3:21004140-21004159 MS.gene060216:intron 40.0%
! CTCCCAATTCTTTTAATCCC+GGG - chr2.3:21005054-21005073 MS.gene060216:intron 40.0%
! CTCGAACATGGTCTAAGATA+TGG + chr2.3:21005243-21005262 None:intergenic 40.0%
! GAAATAAAAGGAGGTGTAGC+TGG - chr2.3:21005856-21005875 MS.gene060216:intron 40.0%
! GTCTCTCAGATCCTTTTGTT+CGG + chr2.3:21007208-21007227 None:intergenic 40.0%
! TAAGCAGTGTCGTTAAATGG+TGG + chr2.3:21005297-21005316 None:intergenic 40.0%
! TAGGATAAGTTTTGCGGTCT+TGG - chr2.3:21005187-21005206 MS.gene060216:intron 40.0%
! TTCATCCCTTCGTTCTAGTT+TGG + chr2.3:21006236-21006255 None:intergenic 40.0%
! TTGTTGTTCCGACACCAATT+AGG + chr2.3:21006564-21006583 None:intergenic 40.0%
!! AATTGGTGTCGGAACAACAA+TGG - chr2.3:21006564-21006583 MS.gene060216:CDS 40.0%
!! AGAAGCATTGGCGTCTTATT+GGG - chr2.3:21007396-21007415 MS.gene060216:CDS 40.0%
!! CATTCTGAGGGTAAGTCTTT+TGG - chr2.3:21005885-21005904 MS.gene060216:intron 40.0%
!! CCATAAGAGGTATCATGGTA+TGG + chr2.3:21005274-21005293 None:intergenic 40.0%
!! CCTCTACATTTGTTGTGTGT+AGG - chr2.3:21004082-21004101 MS.gene060216:intron 40.0%
!! TGTTTCTTTTGTCGATTGCC+CGG - chr2.3:21004875-21004894 MS.gene060216:intron 40.0%
!! TTCTTTGCAGGGTGTTTTGA+AGG - chr2.3:21006402-21006421 MS.gene060216:intron 40.0%
!!! AGTTTTGCATTTGGTCTTGC+AGG - chr2.3:21007148-21007167 MS.gene060216:CDS 40.0%
!!! GTTTTTTGCTACAGGGCTTA+TGG - chr2.3:21004780-21004799 MS.gene060216:intron 40.0%
AACTGCTGTGAGGAATGACT+TGG - chr2.3:21007304-21007323 MS.gene060216:intron 45.0%
AAGACTCAGCCCAGAATAAC+TGG + chr2.3:21006333-21006352 None:intergenic 45.0%
AAGGCCTATGAGCTACAAGT+GGG - chr2.3:21004689-21004708 MS.gene060216:CDS 45.0%
AATCCTATGTGTGATGTGGC+AGG - chr2.3:21004819-21004838 MS.gene060216:intron 45.0%
AATGGAGCAGCTATCATGGA+TGG - chr2.3:21005397-21005416 MS.gene060216:CDS 45.0%
AATTCAAGATGGGTGCAGGA+GGG + chr2.3:21007457-21007476 None:intergenic 45.0%
ACAGTCTGCACGACATTCAT+GGG + chr2.3:21004579-21004598 None:intergenic 45.0%
ACATTCATGGGAAACCACAG+AGG + chr2.3:21004567-21004586 None:intergenic 45.0%
ACTATTGGTCATGTGGCACA+TGG - chr2.3:21003999-21004018 MS.gene060216:CDS 45.0%
ATCCTATGTGTGATGTGGCA+GGG - chr2.3:21004820-21004839 MS.gene060216:intron 45.0%
ATTCATGCTGTTGACCTCTG+TGG - chr2.3:21004550-21004569 MS.gene060216:CDS 45.0%
CCAATCTGGTGAGATTAGGT+GGG - chr2.3:21006785-21006804 MS.gene060216:intron 45.0%
CGTTAAATGGTGGCCATAAG+AGG + chr2.3:21005287-21005306 None:intergenic 45.0%
CTCATGGCTACAATGCTCAA+TGG - chr2.3:21005379-21005398 MS.gene060216:CDS 45.0%
CTCGCACAAGAAAGAAACAG+AGG - chr2.3:21006964-21006983 MS.gene060216:intron 45.0%
CTGCAGTATACATCTCTTCC+CGG + chr2.3:21005075-21005094 None:intergenic 45.0%
CTTGCCAATCTGGTGAGATT+AGG - chr2.3:21006781-21006800 MS.gene060216:intron 45.0%
GAAAGCAATATCGGGTGTTC+AGG - chr2.3:21004037-21004056 MS.gene060216:intron 45.0%
GCCATGGATCCAGTTATTCT+GGG - chr2.3:21006321-21006340 MS.gene060216:CDS 45.0%
GCTAAATGCTCAGAGGTTTG+TGG + chr2.3:21005463-21005482 None:intergenic 45.0%
GGGAAGCTGAGTGAATGTAA+AGG + chr2.3:21007101-21007120 None:intergenic 45.0%
GTGAAGATGAACGATGTCCA+AGG - chr2.3:21004670-21004689 MS.gene060216:CDS 45.0%
TAAATCCTGGCAGGCACTAT+TGG - chr2.3:21003984-21004003 MS.gene060216:CDS 45.0%
TCAAGCTCAACGAAAACCTC+AGG + chr2.3:21006652-21006671 None:intergenic 45.0%
TCCTGAAGTCATATCTCGTC+AGG - chr2.3:21003782-21003801 MS.gene060216:CDS 45.0%
TGACCCTGTGGCAATTGAAA+AGG + chr2.3:21005352-21005371 None:intergenic 45.0%
TGATTGAACCCCAAAAAGGG+AGG + chr2.3:21003832-21003851 None:intergenic 45.0%
TGCAGTATACATCTCTTCCC+GGG + chr2.3:21005074-21005093 None:intergenic 45.0%
TTAGGTCGACCTTGTTCTGA+AGG + chr2.3:21005522-21005541 None:intergenic 45.0%
TTCGTTGAGCTTGAGGTATG+TGG - chr2.3:21006658-21006677 MS.gene060216:intron 45.0%
! ATAAAAGGAGGTGTAGCTGG+TGG - chr2.3:21005859-21005878 MS.gene060216:intron 45.0%
! TGAGGTTTTCGTTGAGCTTG+AGG - chr2.3:21006651-21006670 MS.gene060216:intron 45.0%
! TGAGTCTATGCAAGTTGGGA+GGG - chr2.3:21006902-21006921 MS.gene060216:intron 45.0%
!! ACCTACTTGTTGGCTTACCA+GGG - chr2.3:21005655-21005674 MS.gene060216:CDS 45.0%
!! ATTTGTTGTGTGTAGGGGTG+AGG - chr2.3:21004089-21004108 MS.gene060216:intron 45.0%
!! CTTCTTGGTGTCCGAACAAA+AGG - chr2.3:21007194-21007213 MS.gene060216:intron 45.0%
!! GAGAAGCATTGGCGTCTTAT+TGG - chr2.3:21007395-21007414 MS.gene060216:CDS 45.0%
!! TGAGCTTCAATTTGCTGTGC+CGG - chr2.3:21006534-21006553 MS.gene060216:CDS 45.0%
!!! TTTTCAAGTGACAGAGGCCA+TGG - chr2.3:21006305-21006324 MS.gene060216:CDS 45.0%
AACCCTGCCACATCACACAT+AGG + chr2.3:21004825-21004844 None:intergenic 50.0%
ACAGGGAAAGGTAGCTAAGC+TGG - chr2.3:21007226-21007245 MS.gene060216:intron 50.0%
AGGATCTGAGAGACAGGGAA+AGG - chr2.3:21007214-21007233 MS.gene060216:intron 50.0%
ATCTCCTGTGTGCACTAGCA+GGG - chr2.3:21007343-21007362 MS.gene060216:intron 50.0%
ATGGCATGTCAGCTCGAACA+TGG + chr2.3:21005255-21005274 None:intergenic 50.0%
CAAGGCCTATGAGCTACAAG+TGG - chr2.3:21004688-21004707 MS.gene060216:CDS 50.0%
CAATTCAAGATGGGTGCAGG+AGG + chr2.3:21007458-21007477 None:intergenic 50.0%
CACAGCAGCTAAATGCTCAG+AGG + chr2.3:21005470-21005489 None:intergenic 50.0%
CACAGTCTGCACGACATTCA+TGG + chr2.3:21004580-21004599 None:intergenic 50.0%
CACTTGTAGCTCATAGGCCT+TGG + chr2.3:21004690-21004709 None:intergenic 50.0%
CCCACCTAATCTCACCAGAT+TGG + chr2.3:21006788-21006807 None:intergenic 50.0%
CTCTGAGCATTTAGCTGCTG+TGG - chr2.3:21005468-21005487 MS.gene060216:CDS 50.0%
CTTCGAGAGTGATTCCAGCT+TGG + chr2.3:21007433-21007452 None:intergenic 50.0%
GCATGTGCTGCAGACAAAGT+CGG + chr2.3:21005947-21005966 None:intergenic 50.0%
GCCAATCTGGTGAGATTAGG+TGG - chr2.3:21006784-21006803 MS.gene060216:intron 50.0%
GCCCAGAATAACTGGATCCA+TGG + chr2.3:21006325-21006344 None:intergenic 50.0%
GCCTGACGAGATATGACTTC+AGG + chr2.3:21003786-21003805 None:intergenic 50.0%
GCTCAATGGAGCAGCTATCA+TGG - chr2.3:21005393-21005412 MS.gene060216:CDS 50.0%
GGCATGTTCTTGGAGAGGTT+GGG - chr2.3:21006620-21006639 MS.gene060216:intron 50.0%
GGCCATGGATCCAGTTATTC+TGG - chr2.3:21006320-21006339 MS.gene060216:CDS 50.0%
GTGCGAAAGTAACTGCTGTG+AGG - chr2.3:21007294-21007313 MS.gene060216:intron 50.0%
TCCCTGGTAAGCCAACAAGT+AGG + chr2.3:21005659-21005678 None:intergenic 50.0%
TGCTACAGGGCTTATGGAAG+TGG - chr2.3:21004786-21004805 MS.gene060216:intron 50.0%
TGCTCAGAGGTTTGTGGTTG+TGG + chr2.3:21005457-21005476 None:intergenic 50.0%
TGGGCAGAAATAGGTACCAC+TGG + chr2.3:21005700-21005719 None:intergenic 50.0%
TTCTTGCTTCGACGGCTTCT+TGG - chr2.3:21007179-21007198 MS.gene060216:intron 50.0%
! AGTCTATGCAAGTTGGGAGG+GGG - chr2.3:21006904-21006923 MS.gene060216:intron 50.0%
! CATTGGCGTCTTATTGGGTG+GGG - chr2.3:21007401-21007420 MS.gene060216:CDS 50.0%
! GAGTCTATGCAAGTTGGGAG+GGG - chr2.3:21006903-21006922 MS.gene060216:intron 50.0%
! GCATTGGCGTCTTATTGGGT+GGG - chr2.3:21007400-21007419 MS.gene060216:CDS 50.0%
! GTCGACGTGTTGAGAAGCAT+TGG - chr2.3:21007384-21007403 MS.gene060216:CDS 50.0%
! GTGAGTCTATGCAAGTTGGG+AGG - chr2.3:21006901-21006920 MS.gene060216:intron 50.0%
!! AGCATTGGCGTCTTATTGGG+TGG - chr2.3:21007399-21007418 MS.gene060216:CDS 50.0%
!! AGCTGGTGGAAGCATTCTGA+GGG - chr2.3:21005873-21005892 MS.gene060216:intron 50.0%
!! CACCTACTTGTTGGCTTACC+AGG - chr2.3:21005654-21005673 MS.gene060216:CDS 50.0%
!! GAGCTTCAATTTGCTGTGCC+GGG - chr2.3:21006535-21006554 MS.gene060216:CDS 50.0%
!! GGTGGCCATAAGAGGTATCA+TGG + chr2.3:21005279-21005298 None:intergenic 50.0%
!! TAGCTGGTGGAAGCATTCTG+AGG - chr2.3:21005872-21005891 MS.gene060216:intron 50.0%
AACATGCCCCACCAACCTGT+CGG + chr2.3:21006608-21006627 None:intergenic 55.0%
CATCTCCTGTGTGCACTAGC+AGG - chr2.3:21007342-21007361 MS.gene060216:intron 55.0%
CATGACCAATAGTGCCTGCC+AGG + chr2.3:21003992-21004011 None:intergenic 55.0%
GGCAGGCACTATTGGTCATG+TGG - chr2.3:21003992-21004011 MS.gene060216:CDS 55.0%
GGGCATGTTCTTGGAGAGGT+TGG - chr2.3:21006619-21006638 MS.gene060216:intron 55.0%
GTTGTGTGTAGGGGTGAGGA+TGG - chr2.3:21004093-21004112 MS.gene060216:intron 55.0%
TACCAGGGAACAGTCGCTGA+TGG - chr2.3:21005670-21005689 MS.gene060216:CDS 55.0%
TCTCCTGTGTGCACTAGCAG+GGG - chr2.3:21007344-21007363 MS.gene060216:intron 55.0%
TGTTTCAGCGTGCTTGCCCT+CGG + chr2.3:21006117-21006136 None:intergenic 55.0%
!! AGGTTGGTGGGGCATGTTCT+TGG - chr2.3:21006610-21006629 MS.gene060216:intron 55.0%
!! CTTCAATTTGCTGTGCCGGG+AGG - chr2.3:21006538-21006557 MS.gene060216:CDS 55.0%
AGAGGTTGGGTCACTGCCTG+AGG - chr2.3:21006633-21006652 MS.gene060216:intron 60.0%
CACCATCAGCGACTGTTCCC+TGG + chr2.3:21005675-21005694 None:intergenic 60.0%
CCGACACCAATTAGGCCTCC+CGG + chr2.3:21006556-21006575 None:intergenic 60.0%
CCGGGAGGCCTAATTGGTGT+CGG - chr2.3:21006553-21006572 MS.gene060216:CDS 60.0%
CTGTCGGCACGCGTCAAAGT+GGG + chr2.3:21006592-21006611 None:intergenic 60.0%
GGGTGGGGTCAAATCCAAGC+TGG - chr2.3:21007416-21007435 MS.gene060216:CDS 60.0%
GGTGGGGCATGTTCTTGGAG+AGG - chr2.3:21006615-21006634 MS.gene060216:intron 60.0%
TCACCCCTGCTAGTGCACAC+AGG + chr2.3:21007350-21007369 None:intergenic 60.0%
! AGTCGCTGATGGTGCACCAG+TGG - chr2.3:21005681-21005700 MS.gene060216:CDS 60.0%
! TTTGACGCGTGCCGACAGGT+TGG - chr2.3:21006594-21006613 MS.gene060216:intron 60.0%
CCTGTCGGCACGCGTCAAAG+TGG + chr2.3:21006593-21006612 None:intergenic 65.0%
GCTGTGCCGGGAGGCCTAAT+TGG - chr2.3:21006547-21006566 MS.gene060216:CDS 65.0%
! CCACTTTGACGCGTGCCGAC+AGG - chr2.3:21006590-21006609 MS.gene060216:intron 65.0%
!! ACGCGTGCCGACAGGTTGGT+GGG - chr2.3:21006598-21006617 MS.gene060216:intron 65.0%
! GACGCGTGCCGACAGGTTGG+TGG - chr2.3:21006597-21006616 MS.gene060216:intron 70.0%
!! CGCGTGCCGACAGGTTGGTG+GGG - chr2.3:21006599-21006618 MS.gene060216:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 21003714 21007478 21003714 ID=MS.gene060216
chr2.3 mRNA 21003714 21007478 21003714 ID=MS.gene060216.t1;Parent=MS.gene060216
chr2.3 exon 21007373 21007478 21007373 ID=MS.gene060216.t1.exon1;Parent=MS.gene060216.t1
chr2.3 CDS 21007373 21007478 21007373 ID=cds.MS.gene060216.t1;Parent=MS.gene060216.t1
chr2.3 exon 21007134 21007195 21007134 ID=MS.gene060216.t1.exon2;Parent=MS.gene060216.t1
chr2.3 CDS 21007134 21007195 21007134 ID=cds.MS.gene060216.t1;Parent=MS.gene060216.t1
chr2.3 exon 21006486 21006598 21006486 ID=MS.gene060216.t1.exon3;Parent=MS.gene060216.t1
chr2.3 CDS 21006486 21006598 21006486 ID=cds.MS.gene060216.t1;Parent=MS.gene060216.t1
chr2.3 exon 21006296 21006398 21006296 ID=MS.gene060216.t1.exon4;Parent=MS.gene060216.t1
chr2.3 CDS 21006296 21006398 21006296 ID=cds.MS.gene060216.t1;Parent=MS.gene060216.t1
chr2.3 exon 21005598 21005825 21005598 ID=MS.gene060216.t1.exon5;Parent=MS.gene060216.t1
chr2.3 CDS 21005598 21005825 21005598 ID=cds.MS.gene060216.t1;Parent=MS.gene060216.t1
chr2.3 exon 21005298 21005516 21005298 ID=MS.gene060216.t1.exon6;Parent=MS.gene060216.t1
chr2.3 CDS 21005298 21005516 21005298 ID=cds.MS.gene060216.t1;Parent=MS.gene060216.t1
chr2.3 exon 21004520 21004780 21004520 ID=MS.gene060216.t1.exon7;Parent=MS.gene060216.t1
chr2.3 CDS 21004520 21004780 21004520 ID=cds.MS.gene060216.t1;Parent=MS.gene060216.t1
chr2.3 exon 21003714 21004022 21003714 ID=MS.gene060216.t1.exon8;Parent=MS.gene060216.t1
chr2.3 CDS 21003714 21004022 21003714 ID=cds.MS.gene060216.t1;Parent=MS.gene060216.t1
Gene Sequence

>MS.gene060216

ATGTCGCGGAAGGGTTTGATGGAACAAGACTTGAGTAAGTTGGATGTGACAAAATTGCATCCACTTTCTCCTGAAGTCATATCTCGTCAGGCTACCATTAATATTGGTAATATATCCTCCCTTTTTGGGGTTCAATCATATCACTTATTGATATCACTTATTGAATTGTTACAGTAATACTAGAACATGAACAAATTTCTTGTTAAATAATTATGTAAACTTCTTTTCCATTGATGACTGTTATTGTTAGATGATTGATGAATAAAAAATTAAATCCTGGCAGGCACTATTGGTCATGTGGCACATGGCAAATCAACAGTTGTGAAAGCAATATCGGGTGTTCAGGTATTTCTTTGTCTAATTTTTTTCCTCTACATTTGTTGTGTGTAGGGGTGAGGATGGCTGTGTTTATATTGTATATATGTTATTCTTGGCACATGGTGTTTTGGAATTCTTCTTTGTGATCGATCCATTTAGATGTAGGTGATTTGTTTCAAGTAGAAAGGAAGTATTTACTCATTGACGTACTCAAAATGCTATATTTTATTTAATCCAAACAGCCTGTGAGTTATGAAGCTTCTGAAATCTGAATTACCATAGACTTATGAAGTTTTGTTAATTTCAATATTTGGATTTTATTTTTTCATAGATAGGGTTTATAGCTACGTTCATTTGATTGGTTTATGGAATCCATAAAAAAGTGGTTATCTTCTCCTAACATTTAGATCAATTGAATTTGCTACCCTGTTTTTGCATCTCCAGTTTTGAAAAAAAGATTTACATAACGCCATAGTACCACATTATATTCTTTGTGCATTTCCCTCGAGCTTTTTTATATTCATGCTGTTGACCTCTGTGGTTTCCCATGAATGTCGTGCAGACTGTGCGTTTCAAAAATGAGTTGGAGCGTAACATTACAATCAAGCTTGGCTATGCCAATGCTAAAATATACAAGTGTGAAGATGAACGATGTCCAAGGCCTATGAGCTACAAGTGGGTATTTATTTTCTGATTGATGTTATATTATCAGGTTATTTCAACTATTGGTAATGTGATCATATTTTTTGTTTTTTGCTACAGGGCTTATGGAAGTGGAAAAGAAGATAATCCTATGTGTGATGTGGCAGGGTTTGAAAACTGCAAGATGAAATTGCTGAGGCATGTTTCTTTTGTCGATTGCCCGGTAAAACTCTGAACTTTCATTTTTTGTTTAAGGTTGTTTTATGGATAACTTCATTAAATTTTAAATTTAATGCAGGATTATTTTCATAAATGTGCACATTTGATTTTACATTTTTTATCCATCCAAATTTTATTTTCTCTCCCTACCATTACATTATCTCCCAATTCTTTTAATCCCGGGAAGAGATGTATACTGCAGTGTCTATGTCTTAACGAACATACATATATAGGTATGTGAGAAGATATGAACATGTCCTATATTATCTACTATATCTGACTAAGATTAACTCATAGGATAAGTTTTGCGGTCTTGGAGTTTCTTAGACTCTCTTGAAGAATAGTTTCCATATCTTAGACCATGTTCGAGCTGACATGCCATACCATGATACCTCTTATGGCCACCATTTAACGACACTGCTTAATGCTTATACATCTACGTGATATTTATTTTTACCTTTTCAATTGCCACAGGGTCATGATATTCTCATGGCTACAATGCTCAATGGAGCAGCTATCATGGATGGAGCTTTGCTACTCATAGCTGCTAATGAAAGCTGTCCACAACCACAAACCTCTGAGCATTTAGCTGCTGTGGAAATTATGCGTCTTCAGCACATCATAATCCTTCAGAACAAGGTCGACCTAATTCAAGAGAATGTGGCTATCAATCAACATGAAGCAATTCAGAAGTTTATAGAAGTAAGTTTTTTGCGAAGAGGTTTCTGCTATGCAAGAGAATAACTTTTTGCTTACTGATACACCTACTTGTTGGCTTACCAGGGAACAGTCGCTGATGGTGCACCAGTGGTACCTATTTCTGCCCAATTGAAGTATAATATTGATGCTGTGTGCGAATATATCGTGAAAAAGATCCCAATTCCTGAAAGGAACTTTGTTTTCCCACCTAATATGATAGTAATTCGGTCCTTTGATGTCAATAAACCTGGTTTTGAGGTTGATGAAATAAAAGGAGGTGTAGCTGGTGGAAGCATTCTGAGGGTAAGTCTTTTGGTGAATATTCTAAGTATTTTTCTTGATTTGCACTTATCCGACTTTGTCTGCAGCACATGCAAATATTAGTTTTCCTAATAAATTTGAATTTTGGAATTATTATGTCTTAACATGTATACAATGAGTAATTCTAAAAATGTTTTTTTATTAATAAGTGTCCTTAAAATGTTTAATCTATGCTAGAATTTCAAATCTTTGAAAATATTGCCGAGGGCAAGCACGCTGAAACATGAACACCCAACATATGAGAAACATTGCAACTTTTTTGTTTTTGGATTTTGTCCTTTGCAATTTTCCAAAATAACTTGAAAAACTCCATTTTATTTCCAAACTAGAACGAAGGGATGAACTCAATACCGTGTTTTTATCTAAAAGCAGTTTGAGTTTGTTATGATGAATTTTCAAGTGACAGAGGCCATGGATCCAGTTATTCTGGGCTGAGTCTTGAATCAGACATATTGACATGACATGTTCTTCTGAAACGCATATGACAACTTCTTTGCAGGGTGTTTTGAAGGTCAACCAATTCATTGAAGTTCGACCTGGAATAGTTGTTAAAGATGAGGGTGGAAATATGAGATGCACACCTATATATTCTAGAATAGTTTCATTGTATGCTGAACAAAATGAGCTTCAATTTGCTGTGCCGGGAGGCCTAATTGGTGTCGGAACAACAATGGATCCCACTTTGACGCGTGCCGACAGGTTGGTGGGGCATGTTCTTGGAGAGGTTGGGTCACTGCCTGAGGTTTTCGTTGAGCTTGAGGTATGTGGCTATGCCTAATGATTTATAATTTTATGCATGCATGCGTGCCTGCCTACCATTAATATGCTTGGTTTCACGAAGTTTCACTATTCATATTATTCACTTTTACTTGCCAATCTGGTGAGATTAGGTGGGTAGTCAAAATTTAGTCTGTTTTGAAGTAAGATTTATCAGCCATTAAATCTCAGGTTGGTATTATAATATTATACATCTAATGTTTTAAAAATCGTGAGTCTATGCAAGTTGGGAGGGGGTTGAAAAATTGTAAATTACTACAGATGATCCAATGATCTCGCACAAGAAAGAAACAGAGGATCGTAGACTCCTGCAATTATACCATCCAATTTGCGATACTGCAAACGTTGCATACATCCATAACAAACCATAGTTTACTTTACTCTTTCCTCACTTTAGAATAGTCAAATCCTTTACATTCACTCAGCTTCCCGGAATGCTCAAAATCTTTATTTACATGAGTTTTGCATTTGGTCTTGCAGGTAAACTTTTTCTTGCTTCGACGGCTTCTTGGTGTCCGAACAAAAGGATCTGAGAGACAGGGAAAGGTAGCTAAGCTGGCTAAATCTGAAATCCTAATGTTGAACATAGGATCAATGTCAACTGGTGCGAAAGTAACTGCTGTGAGGAATGACTTGGCAAAATTGCAACTTACATCTCCTGTGTGCACTAGCAGGGGTGAGAAGATTGCACTCAGTCGACGTGTTGAGAAGCATTGGCGTCTTATTGGGTGGGGTCAAATCCAAGCTGGAATCACTCTCGAAGTCCCTCCTGCACCCATCTTGAATTGA
Protein sequence

>MS.gene060216.t1

MSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDNPMCDVAGFENCKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIEGTVADGAPVVPISAQLKYNIDAVCEYIVKKIPIPERNFVFPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDEGGNMRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGHVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVAKLAKSEILMLNIGSMSTGAKVTAVRNDLAKLQLTSPVCTSRGEKIALSRRVEKHWRLIGWGQIQAGITLEVPPAPILN