AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene039110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039110.t1 MTR_2g069440 99.142 466 4 0 1 466 1 466 0.0 949
MS.gene039110.t1 MTR_2g069440 99.142 466 4 0 1 466 178 643 0.0 948
MS.gene039110.t1 MTR_2g075870 93.562 466 30 0 1 466 1 466 0.0 907
MS.gene039110.t1 MTR_2g021300 25.068 367 197 15 33 377 51 361 1.93e-15 78.6
MS.gene039110.t1 MTR_7g094460 26.207 290 125 11 33 288 64 298 1.05e-14 76.3
MS.gene039110.t1 MTR_3g076660 26.335 281 152 10 29 288 89 335 2.83e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039110.t1 AT1G04170 90.323 465 44 1 1 464 1 465 0.0 878
MS.gene039110.t1 AT1G04170 90.323 465 44 1 1 464 1 465 0.0 878
MS.gene039110.t1 AT4G18330 81.128 461 87 0 4 464 11 471 0.0 783
MS.gene039110.t1 AT2G18720 75.810 463 110 1 4 466 10 470 0.0 742
MS.gene039110.t1 AT2G18720 75.810 463 110 1 4 466 10 470 0.0 742
MS.gene039110.t1 AT2G18720 73.404 376 100 0 91 466 4 379 0.0 587
MS.gene039110.t1 AT4G18330 82.847 274 47 0 4 277 11 284 6.29e-170 479
MS.gene039110.t1 AT4G20360 25.067 375 201 14 29 377 76 396 9.09e-15 76.6
MS.gene039110.t1 AT4G20360 25.067 375 201 14 29 377 76 396 9.09e-15 76.6
MS.gene039110.t1 AT4G02930 25.874 286 131 10 33 288 68 302 2.09e-14 75.5

Find 117 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTGCTTCGACGGCTTCT+TGG 0.227091 2.2:+23015483 MS.gene039110:CDS
GCTTAACGGAGCAGCAATTA+TGG 0.274741 2.2:+23013773 MS.gene039110:CDS
TACTTCAATTGTGCTGAAAT+AGG 0.283478 2.2:-23014095 None:intergenic
GCCGTTCCTGGAGGCCTTAT+AGG 0.296184 2.2:+23015112 MS.gene039110:CDS
GAGCTTCAATTTGCCGTTCC+TGG 0.298396 2.2:+23015100 MS.gene039110:CDS
CAGGTCGAACTTCAATGAAT+TGG 0.308904 2.2:-23014994 None:intergenic
TATGAAGTTGATGAAATAAA+AGG 0.313474 2.2:+23014233 MS.gene039110:CDS
AGCAATCTTCTCTCCCTTGC+TGG 0.335178 2.2:-23015661 None:intergenic
CGTCAGGCTACTATCAATAT+TGG 0.341601 2.2:+23012100 MS.gene039110:CDS
GACCGAATTACTATCATATT+AGG 0.345637 2.2:-23014188 None:intergenic
AGCATTGGCGTCTCATCGGC+TGG 0.345658 2.2:+23015703 MS.gene039110:CDS
AGCAAATAGTGAAACTATTC+TGG 0.352600 2.2:-23015068 None:intergenic
TTGTGGTTCCAACACCTATA+AGG 0.370270 2.2:-23015126 None:intergenic
CTCCCTTGCTGGTGCACACA+GGG 0.382466 2.2:-23015650 None:intergenic
GGAGAAATGAAGTTCCGTTC+AGG 0.383960 2.2:-23014164 None:intergenic
GGGTGATACCAGCTTGGATT+TGG 0.387569 2.2:-23015728 None:intergenic
TGAAGTTCCGTTCAGGGATT+GGG 0.389548 2.2:-23014157 None:intergenic
TCATCTTTAACAACTATTCC+AGG 0.391794 2.2:-23015013 None:intergenic
ATGAAGTTCCGTTCAGGGAT+TGG 0.395711 2.2:-23014158 None:intergenic
GAAAGCAATATCAGGTGTTC+AGG 0.396358 2.2:+23012299 MS.gene039110:CDS
TGCTCAGAAGTTTGTGGTTG+AGG 0.402531 2.2:-23013834 None:intergenic
CTCATGGCTACTATGCTTAA+CGG 0.410989 2.2:+23013759 MS.gene039110:CDS
GCCTGACGGGATATGACTTC+AGG 0.416566 2.2:-23012085 None:intergenic
CTTCTTGGTGTCCGGACAAA+AGG 0.426909 2.2:+23015498 MS.gene039110:CDS
TCCCCTTCCTGTAGGGCCTA+TGG 0.427172 2.2:+23013147 MS.gene039110:intron
TCCATGTGCCACATGACCTA+TGG 0.440110 2.2:-23012262 None:intergenic
CACCTAATATGATAGTAATT+CGG 0.440151 2.2:+23014186 MS.gene039110:CDS
AGGTTGGTAGGGCAAGTTCT+TGG 0.441170 2.2:+23015175 MS.gene039110:CDS
GAAATAAAAGGAGGCGTAGC+TGG 0.445432 2.2:+23014245 MS.gene039110:CDS
GCTCAGAAGTTTGTGGTTGA+GGG 0.446551 2.2:-23013833 None:intergenic
TCCTGTAGGGCCTATGGAAG+TGG 0.453457 2.2:+23013153 MS.gene039110:intron
TTCGACGGCTTCTTGGTGTC+CGG 0.461865 2.2:+23015490 MS.gene039110:CDS
GTCTTTCCTTTAACTCAGAA+GGG 0.463331 2.2:-23015769 None:intergenic
AACATAGGATCAATGTCAAC+AGG 0.470116 2.2:+23015576 MS.gene039110:CDS
TGTCTTTCCTTTAACTCAGA+AGG 0.473904 2.2:-23015770 None:intergenic
TCCTGAAGTCATATCCCGTC+AGG 0.474745 2.2:+23012084 MS.gene039110:CDS
TGAGACCTTTCCTTGTCTCT+CGG 0.480522 2.2:-23015523 None:intergenic
GGGCAAGTTCTTGGAGAGGT+TGG 0.481136 2.2:+23015184 MS.gene039110:CDS
TTCTGAGCATTTAGCTGCTG+TGG 0.485419 2.2:+23013848 MS.gene039110:CDS
CACTTGTAGGACATAGGCCT+TGG 0.485758 2.2:-23013058 None:intergenic
CCTGGAGGCCTTATAGGTGT+TGG 0.486957 2.2:+23015118 MS.gene039110:CDS
ATCTTCCTTTCCACTTCCAT+AGG 0.488869 2.2:-23013163 None:intergenic
GAGAAATGAAGTTCCGTTCA+GGG 0.489099 2.2:-23014163 None:intergenic
TCTCCCTTGCTGGTGCACAC+AGG 0.489960 2.2:-23015651 None:intergenic
GCTAAATGCTCAGAAGTTTG+TGG 0.490501 2.2:-23013840 None:intergenic
ATGTCTCAGCAATTTCATCT+TGG 0.491832 2.2:-23013220 None:intergenic
GCATTGGCGTCTCATCGGCT+GGG 0.503049 2.2:+23015704 MS.gene039110:CDS
CCACTTTGACACGTGCTGAC+AGG 0.507411 2.2:+23015155 MS.gene039110:CDS
ACCTATAAGGCCTCCAGGAA+CGG 0.507955 2.2:-23015113 None:intergenic
CAATTCATTGAAGTTCGACC+TGG 0.511871 2.2:+23014995 MS.gene039110:CDS
TGTGCTGAAATAGGTACTAC+TGG 0.513854 2.2:-23014086 None:intergenic
ACACGTGCTGACAGGTTGGT+AGG 0.514970 2.2:+23015163 MS.gene039110:CDS
TCCCCTGTGTGCACCAGCAA+GGG 0.516017 2.2:+23015648 MS.gene039110:CDS
TTTATCTTGGCAGGTACCAT+AGG 0.522033 2.2:+23012246 MS.gene039110:intron
TCAAGTCTACCTTGTTCTGA+AGG 0.522796 2.2:-23013899 None:intergenic
ACTTCTGAATTGCTTCATGC+TGG 0.523695 2.2:-23013944 None:intergenic
ACGGTTGTGAAAGCAATATC+AGG 0.539247 2.2:+23012291 MS.gene039110:CDS
CATTGGCGTCTCATCGGCTG+GGG 0.540158 2.2:+23015705 MS.gene039110:CDS
TGTTGACATCCAACGTACTC+AGG 0.540642 2.2:-23012045 None:intergenic
TCATTTGATGTCAATAAACC+TGG 0.544265 2.2:+23014209 MS.gene039110:CDS
AGCAGTCAAAATGGCTCGGA+GGG 0.548091 2.2:+23012006 None:intergenic
GAGAAGCATTGGCGTCTCAT+CGG 0.548873 2.2:+23015699 MS.gene039110:CDS
ATTTCATCAACTTCATAACC+AGG 0.552290 2.2:-23014227 None:intergenic
CATAATAATCCTTCAGAACA+AGG 0.553381 2.2:+23013890 MS.gene039110:CDS
TTCCCCTGTGTGCACCAGCA+AGG 0.554733 2.2:+23015647 MS.gene039110:CDS
AATATTGATAGTAGCCTGAC+GGG 0.558072 2.2:-23012098 None:intergenic
CACGTGCTGACAGGTTGGTA+GGG 0.559747 2.2:+23015164 MS.gene039110:CDS
TCTTTCCTTTAACTCAGAAG+GGG 0.561822 2.2:-23015768 None:intergenic
CAGTCAAAATGGCTCGGAGG+GGG 0.565362 2.2:+23012008 None:intergenic
GAAATGCTAATGTTGAACAT+AGG 0.565740 2.2:+23015561 MS.gene039110:CDS
AGTCCTATGTGTGATGTACC+TGG 0.567843 2.2:+23013186 MS.gene039110:CDS
GGTAGGGCAAGTTCTTGGAG+AGG 0.568050 2.2:+23015180 MS.gene039110:CDS
ACCATAGGTCATGTGGCACA+TGG 0.568672 2.2:+23012261 MS.gene039110:CDS
ATAGTTGTTAAAGATGAGAG+TGG 0.568851 2.2:+23015019 MS.gene039110:CDS
CCAACACCTATAAGGCCTCC+AGG 0.574378 2.2:-23015118 None:intergenic
GTGAAGATGAACGGTGTCCA+AGG 0.574468 2.2:+23013041 MS.gene039110:CDS
GGCTGGGGCCAAATCCAAGC+TGG 0.576495 2.2:+23015720 MS.gene039110:CDS
CGAATTACTATCATATTAGG+TGG 0.577597 2.2:-23014185 None:intergenic
AACGGAGCAGCAATTATGGA+TGG 0.578784 2.2:+23013777 MS.gene039110:CDS
GTAGACGTGTTGAGAAGCAT+TGG 0.583914 2.2:+23015688 MS.gene039110:CDS
GTAGGGACATGATATTCTCA+TGG 0.584619 2.2:+23013743 MS.gene039110:intron
CCTGTCAGCACGTGTCAAAG+TGG 0.586026 2.2:-23015155 None:intergenic
GAAGTTGATGAAATAAAAGG+AGG 0.590625 2.2:+23014236 MS.gene039110:CDS
AGACTTGATTCAAGAAAATG+TGG 0.590713 2.2:+23013914 MS.gene039110:CDS
TGGAGTAGATCGGTGTGCAT+CGG 0.591503 2.2:-23015048 None:intergenic
CGTAACATTACAATCAAGCT+CGG 0.595254 2.2:+23012992 MS.gene039110:CDS
CATCAAGGGTGATACCAGCT+TGG 0.595808 2.2:-23015734 None:intergenic
CTTCAATTTGCCGTTCCTGG+AGG 0.596296 2.2:+23015103 MS.gene039110:CDS
GAAACTATTCTGGAGTAGAT+CGG 0.596707 2.2:-23015058 None:intergenic
CTTTCCTTTAACTCAGAAGG+GGG 0.604026 2.2:-23015767 None:intergenic
CAATATTGATAGTAGCCTGA+CGG 0.605239 2.2:-23012099 None:intergenic
GGCAGGTACCATAGGTCATG+TGG 0.612626 2.2:+23012254 MS.gene039110:intron
ATTCTTCACAGCTACCACTC+TGG 0.613369 2.2:-23015601 None:intergenic
TTTGACACGTGCTGACAGGT+TGG 0.616502 2.2:+23015159 MS.gene039110:CDS
TAGCTGGTGGAAGTATTCTG+AGG 0.616596 2.2:+23014261 MS.gene039110:CDS
AATACCCACTTGTAGGACAT+AGG 0.621972 2.2:-23013064 None:intergenic
TCCCTTGCTGGTGCACACAG+GGG 0.623304 2.2:-23015649 None:intergenic
TATACAAGTGTGAAGATGAA+CGG 0.627460 2.2:+23013032 MS.gene039110:CDS
AAGAAGCAGTCAAAATGGCT+CGG 0.627647 2.2:+23012002 None:intergenic
TAGGGCCTATGGAAGTGGAA+AGG 0.630198 2.2:+23013158 MS.gene039110:intron
TGTCAAAGTGGGATCCATTG+TGG 0.634276 2.2:-23015143 None:intergenic
CTGTCAGCACGTGTCAAAGT+GGG 0.638696 2.2:-23015154 None:intergenic
TATAGGTGTTGGAACCACAA+TGG 0.639191 2.2:+23015129 MS.gene039110:CDS
GCAGTCAAAATGGCTCGGAG+GGG 0.639861 2.2:+23012007 None:intergenic
AAAAGATCCCAATCCCTGAA+CGG 0.642212 2.2:+23014150 MS.gene039110:CDS
AGCTGGTGGAAGTATTCTGA+GGG 0.646565 2.2:+23014262 MS.gene039110:CDS
ACAAAAGGTTCCGAGAGACA+AGG 0.646997 2.2:+23015513 MS.gene039110:CDS
AGGTTCCGAGAGACAAGGAA+AGG 0.647286 2.2:+23015518 MS.gene039110:CDS
TGTGGCACATGGAAAGTCAA+CGG 0.652230 2.2:+23012272 MS.gene039110:CDS
AATCCAGGTACATCACACAT+AGG 0.655757 2.2:-23013189 None:intergenic
ATAAAAGGAGGCGTAGCTGG+TGG 0.662482 2.2:+23014248 MS.gene039110:CDS
AATGTCAACAGGTGCCAGAG+TGG 0.677771 2.2:+23015587 MS.gene039110:CDS
TTTCCTTTAACTCAGAAGGG+GGG 0.683950 2.2:-23015766 None:intergenic
GGTAGCTGTGAAGAATGACT+TGG 0.690795 2.2:+23015608 MS.gene039110:CDS
AAGCAGTCAAAATGGCTCGG+AGG 0.693793 2.2:+23012005 None:intergenic
GGAACAAGACCTGAGTACGT+TGG 0.708584 2.2:+23012036 MS.gene039110:CDS
GATATGACTTCAGGAGACAG+CGG 0.729324 2.2:-23012076 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAATGTTATAAATCA+AGG - chr2.2:23014608-23014627 None:intergenic 10.0%
!! AAAAAAAATAATAGCTAAAG+AGG - chr2.2:23013680-23013699 None:intergenic 15.0%
!! AAAATTCATATATTGAAACA+AGG - chr2.2:23012669-23012688 None:intergenic 15.0%
!! AATTTAATAGTACATATACA+TGG - chr2.2:23013467-23013486 None:intergenic 15.0%
!! TTGAGAAAAATATAAATTCA+AGG - chr2.2:23012576-23012595 None:intergenic 15.0%
!! TTGCATAAAAAAATTAACTT+CGG - chr2.2:23013537-23013556 None:intergenic 15.0%
!! TTTCGAAAATTATAAATTGT+AGG - chr2.2:23012533-23012552 None:intergenic 15.0%
!!! ATAAGATTTTAGTATGATAT+AGG + chr2.2:23013316-23013335 MS.gene039110:intron 15.0%
!!! ATTTTTTTATGCAATTAAAG+TGG + chr2.2:23013543-23013562 MS.gene039110:intron 15.0%
!!! TAAGATTTTAGTATGATATA+GGG + chr2.2:23013317-23013336 MS.gene039110:intron 15.0%
!!! TATCAAGTTATTCTAAAAAT+TGG - chr2.2:23014755-23014774 None:intergenic 15.0%
!!! TTAGTTTTGAATTTTGATAA+AGG + chr2.2:23012840-23012859 MS.gene039110:intron 15.0%
!! AAGATACAAAATGAAAACAA+AGG - chr2.2:23014419-23014438 None:intergenic 20.0%
!! AATTGAGAGATAATATGATA+AGG - chr2.2:23013412-23013431 None:intergenic 20.0%
!! AATTTATGGTATATAGTATG+TGG + chr2.2:23012415-23012434 MS.gene039110:intron 20.0%
!! AGATACAAAATGAAAACAAA+GGG - chr2.2:23014418-23014437 None:intergenic 20.0%
!! ATCATTTATGTTGTTCAAAA+GGG - chr2.2:23014017-23014036 None:intergenic 20.0%
!! ATCTGTAAATGTGTAATTTA+TGG + chr2.2:23012401-23012420 MS.gene039110:intron 20.0%
!! ATTCAATAATATAGCATAGA+TGG - chr2.2:23013656-23013675 None:intergenic 20.0%
!! GAAAGATGTAAAAAATTACA+AGG - chr2.2:23014708-23014727 None:intergenic 20.0%
!! GAACTAAAATACATATATCA+TGG - chr2.2:23012877-23012896 None:intergenic 20.0%
!! TATCATTTATGTTGTTCAAA+AGG - chr2.2:23014018-23014037 None:intergenic 20.0%
!! TTTGCAATTTAAATGAAAAG+TGG + chr2.2:23014493-23014512 MS.gene039110:intron 20.0%
!!! AAGATTTTAGTATGATATAG+GGG + chr2.2:23013318-23013337 MS.gene039110:intron 20.0%
!!! AGATTTGTCATTTTAGTATT+AGG + chr2.2:23013092-23013111 MS.gene039110:intron 20.0%
!!! CAATTGGTTTTATTTTACAT+TGG + chr2.2:23013363-23013382 MS.gene039110:intron 20.0%
!!! TATGAAGTTGATGAAATAAA+AGG + chr2.2:23014233-23014252 MS.gene039110:CDS 20.0%
!!! TTTTAGAATAACTTGATAGA+AGG + chr2.2:23014757-23014776 MS.gene039110:intron 20.0%
! AAAAAAATTAACTTCGGTGA+GGG - chr2.2:23013531-23013550 None:intergenic 25.0%
! AATGTTATAAATCAAGGCAT+TGG - chr2.2:23014602-23014621 None:intergenic 25.0%
! ATCAATTCATAAGACAAATC+AGG + chr2.2:23015282-23015301 MS.gene039110:intron 25.0%
! ATCGGTAATGAAATTTATCT+TGG + chr2.2:23012233-23012252 MS.gene039110:intron 25.0%
! CACCTAATATGATAGTAATT+CGG + chr2.2:23014186-23014205 MS.gene039110:CDS 25.0%
! CGTACAATTTATTATTTGCA+GGG + chr2.2:23014956-23014975 MS.gene039110:intron 25.0%
! CTATTTCCAAACAAGAAAAT+GGG + chr2.2:23014794-23014813 MS.gene039110:intron 25.0%
! GATACAAAATGAAAACAAAG+GGG - chr2.2:23014417-23014436 None:intergenic 25.0%
! TAAAAAAATTAACTTCGGTG+AGG - chr2.2:23013532-23013551 None:intergenic 25.0%
! TAGAGAATGACATAATACAA+GGG - chr2.2:23012329-23012348 None:intergenic 25.0%
! TATATAACAAATGATGGTTC+AGG - chr2.2:23013274-23013293 None:intergenic 25.0%
! TCGTACAATTTATTATTTGC+AGG + chr2.2:23014955-23014974 MS.gene039110:intron 25.0%
! TCTATTTCCAAACAAGAAAA+TGG + chr2.2:23014793-23014812 MS.gene039110:intron 25.0%
! TTAAAAATGATAGCAGCAAA+TGG - chr2.2:23014383-23014402 None:intergenic 25.0%
!! ATACAAGTAAGTTTTCTATG+AGG + chr2.2:23013969-23013988 MS.gene039110:intron 25.0%
!! TATATTTTCTCAAACCAAAC+AGG + chr2.2:23014527-23014546 MS.gene039110:intron 25.0%
!! TGCAAATTAAACATGCTTTT+TGG - chr2.2:23014311-23014330 None:intergenic 25.0%
!! TTCTAAAAATTGGATGCATA+AGG - chr2.2:23014745-23014764 None:intergenic 25.0%
!! TTTCTTGTTTGGAAATAGAA+TGG - chr2.2:23014792-23014811 None:intergenic 25.0%
!! TTTTTAATGAACTATGCACA+TGG + chr2.2:23015443-23015462 MS.gene039110:intron 25.0%
!!! AGATTTTAGTATGATATAGG+GGG + chr2.2:23013319-23013338 MS.gene039110:intron 25.0%
!!! ATGTCATTCTCTACTTTTTT+TGG + chr2.2:23012336-23012355 MS.gene039110:intron 25.0%
!!! GAACCATCATTTGTTATATA+GGG + chr2.2:23013274-23013293 MS.gene039110:intron 25.0%
!!! TGAACCATCATTTGTTATAT+AGG + chr2.2:23013273-23013292 MS.gene039110:intron 25.0%
!!! TGTCATTCTCTACTTTTTTT+GGG + chr2.2:23012337-23012356 MS.gene039110:intron 25.0%
!!! TGTTGATCTTTTTTCTGTTA+TGG + chr2.2:23015377-23015396 MS.gene039110:intron 25.0%
!!! TTGTTATATAGGGTTGTTTT+AGG + chr2.2:23013284-23013303 MS.gene039110:intron 25.0%
ACAGTCTGTAAAACATTCAT+GGG - chr2.2:23012950-23012969 None:intergenic 30.0%
AGACTTGATTCAAGAAAATG+TGG + chr2.2:23013914-23013933 MS.gene039110:CDS 30.0%
AGCAAATAGTGAAACTATTC+TGG - chr2.2:23015071-23015090 None:intergenic 30.0%
ATAGTTGTTAAAGATGAGAG+TGG + chr2.2:23015019-23015038 MS.gene039110:CDS 30.0%
ATCTAAAGACTTCAGAGAAA+TGG - chr2.2:23015324-23015343 None:intergenic 30.0%
ATTCCAAACAGCAATAGAAT+TGG - chr2.2:23014565-23014584 None:intergenic 30.0%
ATTTCATCAACTTCATAACC+AGG - chr2.2:23014230-23014249 None:intergenic 30.0%
CAACCCTATATAACAAATGA+TGG - chr2.2:23013280-23013299 None:intergenic 30.0%
CATAATAATCCTTCAGAACA+AGG + chr2.2:23013890-23013909 MS.gene039110:CDS 30.0%
CGAATTACTATCATATTAGG+TGG - chr2.2:23014188-23014207 None:intergenic 30.0%
CTAAAATAATACCCACTTGT+AGG - chr2.2:23013074-23013093 None:intergenic 30.0%
CTATACATTATCAAAGCTCA+AGG - chr2.2:23012905-23012924 None:intergenic 30.0%
CTTTCATATTCTTGCACAAT+TGG + chr2.2:23013347-23013366 MS.gene039110:intron 30.0%
GAAATGCTAATGTTGAACAT+AGG + chr2.2:23015561-23015580 MS.gene039110:CDS 30.0%
GACCGAATTACTATCATATT+AGG - chr2.2:23014191-23014210 None:intergenic 30.0%
GATCAATTTCCATTTCCAAT+TGG + chr2.2:23014861-23014880 MS.gene039110:intron 30.0%
GTAATGAAATTTATCTTGGC+AGG + chr2.2:23012237-23012256 MS.gene039110:intron 30.0%
GTACGGAGTTAAAAGAATTA+TGG + chr2.2:23013579-23013598 MS.gene039110:intron 30.0%
GTAGAGAATGACATAATACA+AGG - chr2.2:23012330-23012349 None:intergenic 30.0%
GTCTTTAGATGATTTACACT+TGG + chr2.2:23015334-23015353 MS.gene039110:intron 30.0%
TAAAACACACATATCTTCCA+GGG - chr2.2:23013442-23013461 None:intergenic 30.0%
TACTTCAATTGTGCTGAAAT+AGG - chr2.2:23014098-23014117 None:intergenic 30.0%
TATACAAGTGTGAAGATGAA+CGG + chr2.2:23013032-23013051 MS.gene039110:CDS 30.0%
TCATCTTTAACAACTATTCC+AGG - chr2.2:23015016-23015035 None:intergenic 30.0%
TCATTTGATGTCAATAAACC+TGG + chr2.2:23014209-23014228 MS.gene039110:CDS 30.0%
TGTGCGATTTAAAAATGAGT+TGG + chr2.2:23012967-23012986 MS.gene039110:CDS 30.0%
TGTGGAAATATTCTGAATGA+TGG + chr2.2:23012433-23012452 MS.gene039110:intron 30.0%
TTACTGTTCCAATTTCTGTA+GGG + chr2.2:23013726-23013745 MS.gene039110:intron 30.0%
TTCTCAATCCAATTACTAAG+CGG + chr2.2:23012589-23012608 MS.gene039110:intron 30.0%
TTTACTGTTCCAATTTCTGT+AGG + chr2.2:23013725-23013744 MS.gene039110:intron 30.0%
TTTGGAAATAGAATGGCATA+TGG - chr2.2:23014785-23014804 None:intergenic 30.0%
! AACCACTAGGAATCAATTTT+TGG - chr2.2:23012762-23012781 None:intergenic 30.0%
! ATCTTGGAATTTTCAAATCC+AGG - chr2.2:23013207-23013226 None:intergenic 30.0%
! ATTGGATGCATAAGGTTTTA+TGG - chr2.2:23014737-23014756 None:intergenic 30.0%
! GTATTAGGTCATTCATCTTT+TGG + chr2.2:23013107-23013126 MS.gene039110:intron 30.0%
! TGTGGGGTTTTTCATATAAT+GGG + chr2.2:23013617-23013636 MS.gene039110:intron 30.0%
! TTAAAGTGGTTTGCATTCAA+TGG + chr2.2:23013557-23013576 MS.gene039110:intron 30.0%
! TTAAGTCCCATTTTCTTGTT+TGG - chr2.2:23014803-23014822 None:intergenic 30.0%
! TTTCCAATTCTATTGCTGTT+TGG + chr2.2:23014559-23014578 MS.gene039110:intron 30.0%
!! ATAAATCAAGGCATTGGTAA+AGG - chr2.2:23014596-23014615 None:intergenic 30.0%
!! GAAGTTGATGAAATAAAAGG+AGG + chr2.2:23014236-23014255 MS.gene039110:CDS 30.0%
!! TAAACTTTTTCTTGCTTCGA+CGG + chr2.2:23015475-23015494 MS.gene039110:CDS 30.0%
!! TTATTTGCAGGGTGTTTTAA+AGG + chr2.2:23014967-23014986 MS.gene039110:intron 30.0%
!!! AATTATGGTGCTTTTTCGTA+TGG + chr2.2:23013594-23013613 MS.gene039110:intron 30.0%
!!! GTCATTCTCTACTTTTTTTG+GGG + chr2.2:23012338-23012357 MS.gene039110:intron 30.0%
!!! TCATTCTCTACTTTTTTTGG+GGG + chr2.2:23012339-23012358 MS.gene039110:intron 30.0%
AAACATTCATGGGAGAACAT+AGG - chr2.2:23012940-23012959 None:intergenic 35.0%
AAATACCTTTCCAGCACAAT+AGG - chr2.2:23015416-23015435 None:intergenic 35.0%
AAATTAAACGTATACCCCCA+AGG + chr2.2:23013482-23013501 MS.gene039110:intron 35.0%
AACATAGGATCAATGTCAAC+AGG + chr2.2:23015576-23015595 MS.gene039110:CDS 35.0%
AAGACAACAGAGTGAAAACA+AGG + chr2.2:23014463-23014482 MS.gene039110:intron 35.0%
AATACCTTTCCAGCACAATA+GGG - chr2.2:23015415-23015434 None:intergenic 35.0%
AGAACGTGCAATATGATACA+TGG + chr2.2:23014659-23014678 MS.gene039110:intron 35.0%
AGACAACAGAGTGAAAACAA+GGG + chr2.2:23014464-23014483 MS.gene039110:intron 35.0%
ATGTCTCAGCAATTTCATCT+TGG - chr2.2:23013223-23013242 None:intergenic 35.0%
CAATCAACTATGTAACCACT+AGG - chr2.2:23012775-23012794 None:intergenic 35.0%
CACAGTCTGTAAAACATTCA+TGG - chr2.2:23012951-23012970 None:intergenic 35.0%
CGTAACATTACAATCAAGCT+CGG + chr2.2:23012992-23013011 MS.gene039110:CDS 35.0%
CTAAAACACACATATCTTCC+AGG - chr2.2:23013443-23013462 None:intergenic 35.0%
CTGTGTAACTATCTGCTTTA+TGG + chr2.2:23012723-23012742 MS.gene039110:intron 35.0%
TATCATGTCCCTACAGAAAT+TGG - chr2.2:23013737-23013756 None:intergenic 35.0%
TCAAGTTCCACAAAAACATC+AGG - chr2.2:23015217-23015236 None:intergenic 35.0%
TCTCAATCCAATTACTAAGC+GGG + chr2.2:23012590-23012609 MS.gene039110:intron 35.0%
TCTCTCAATTCTTTAATCCC+TGG + chr2.2:23013422-23013441 MS.gene039110:intron 35.0%
TTTCGAAATCCAAGTAGTGT+TGG + chr2.2:23012545-23012564 MS.gene039110:intron 35.0%
! AATATTGATAGTAGCCTGAC+GGG - chr2.2:23012101-23012120 None:intergenic 35.0%
! CAAGTAAGTTTTCTATGAGG+AGG + chr2.2:23013972-23013991 MS.gene039110:intron 35.0%
! CAATATTGATAGTAGCCTGA+CGG - chr2.2:23012102-23012121 None:intergenic 35.0%
! CAGTTTGAAACAATTCACCT+TGG - chr2.2:23012470-23012489 None:intergenic 35.0%
! CTCCAAAAATTGATTCCTAG+TGG + chr2.2:23012757-23012776 MS.gene039110:intron 35.0%
! GTGGGGTTTTTCATATAATG+GGG + chr2.2:23013618-23013637 MS.gene039110:intron 35.0%
! GTGTGGGGTTTTTCATATAA+TGG + chr2.2:23013616-23013635 MS.gene039110:intron 35.0%
!! GAAACTATTCTGGAGTAGAT+CGG - chr2.2:23015061-23015080 None:intergenic 35.0%
!! GGAATCAATTTTTGGAGAGA+CGG - chr2.2:23012754-23012773 None:intergenic 35.0%
!! TGATGTTTTTGTGGAACTTG+AGG + chr2.2:23015216-23015235 MS.gene039110:CDS 35.0%
!! TGTTTCTTTTGTTGATTGCC+CGG + chr2.2:23013242-23013261 MS.gene039110:CDS 35.0%
!!! AATGATACTCTCCCCTTTTT+TGG + chr2.2:23014031-23014050 MS.gene039110:intron 35.0%
!!! AATTTTTTCCCCTTCCTGTA+GGG + chr2.2:23013140-23013159 MS.gene039110:intron 35.0%
AAAAGATCCCAATCCCTGAA+CGG + chr2.2:23014150-23014169 MS.gene039110:CDS 40.0%
AAACATGGCTCATGATCAAC+GGG - chr2.2:23014900-23014919 None:intergenic 40.0%
AAGGAGAGCAAACAATTACG+AGG - chr2.2:23013393-23013412 None:intergenic 40.0%
AATACCCACTTGTAGGACAT+AGG - chr2.2:23013067-23013086 None:intergenic 40.0%
AATCCAGGTACATCACACAT+AGG - chr2.2:23013192-23013211 None:intergenic 40.0%
ACGGTTGTGAAAGCAATATC+AGG + chr2.2:23012291-23012310 MS.gene039110:CDS 40.0%
ACTTCTGAATTGCTTCATGC+TGG - chr2.2:23013947-23013966 None:intergenic 40.0%
AGCAGATAGTTACACAGATG+AGG - chr2.2:23012720-23012739 None:intergenic 40.0%
AGGAGAGCAAACAATTACGA+GGG - chr2.2:23013392-23013411 None:intergenic 40.0%
ATACCTTTCCAGCACAATAG+GGG - chr2.2:23015414-23015433 None:intergenic 40.0%
ATCTTCCTTTCCACTTCCAT+AGG - chr2.2:23013166-23013185 None:intergenic 40.0%
CAAACATGGCTCATGATCAA+CGG - chr2.2:23014901-23014920 None:intergenic 40.0%
CAAATGTCTAACCCCAAACA+TGG - chr2.2:23014915-23014934 None:intergenic 40.0%
CAATTCATTGAAGTTCGACC+TGG + chr2.2:23014995-23015014 MS.gene039110:CDS 40.0%
CAGGTCGAACTTCAATGAAT+TGG - chr2.2:23014997-23015016 None:intergenic 40.0%
CCTGGGAAAACACCAAAAAA+GGG - chr2.2:23014046-23014065 None:intergenic 40.0%
CGTCAGGCTACTATCAATAT+TGG + chr2.2:23012100-23012119 MS.gene039110:CDS 40.0%
CTCATGGCTACTATGCTTAA+CGG + chr2.2:23013759-23013778 MS.gene039110:CDS 40.0%
CTGGGAAAACACCAAAAAAG+GGG - chr2.2:23014045-23014064 None:intergenic 40.0%
GAAAGCAATATCAGGTGTTC+AGG + chr2.2:23012299-23012318 MS.gene039110:CDS 40.0%
GACAACAGAGTGAAAACAAG+GGG + chr2.2:23014465-23014484 MS.gene039110:intron 40.0%
GAGAAATGAAGTTCCGTTCA+GGG - chr2.2:23014166-23014185 None:intergenic 40.0%
GCTAAATGCTCAGAAGTTTG+TGG - chr2.2:23013843-23013862 None:intergenic 40.0%
GTAGGGACATGATATTCTCA+TGG + chr2.2:23013743-23013762 MS.gene039110:intron 40.0%
GTTGATCATGAGCCATGTTT+GGG + chr2.2:23014900-23014919 MS.gene039110:intron 40.0%
TCAAGTCTACCTTGTTCTGA+AGG - chr2.2:23013902-23013921 None:intergenic 40.0%
TCATGTACCCGCTTAGTAAT+TGG - chr2.2:23012600-23012619 None:intergenic 40.0%
TCTGAGGGTAAGTCTTTCTT+TGG + chr2.2:23014277-23014296 MS.gene039110:intron 40.0%
TGTGCTGAAATAGGTACTAC+TGG - chr2.2:23014089-23014108 None:intergenic 40.0%
TTGATCATGAGCCATGTTTG+GGG + chr2.2:23014901-23014920 MS.gene039110:intron 40.0%
TTGTGGTTCCAACACCTATA+AGG - chr2.2:23015129-23015148 None:intergenic 40.0%
TTTATCTTGGCAGGTACCAT+AGG + chr2.2:23012246-23012265 MS.gene039110:intron 40.0%
! GTGGTTTGCATTCAATGGTA+CGG + chr2.2:23013562-23013581 MS.gene039110:intron 40.0%
! TGATGGATCTATTTACGCCA+AGG + chr2.2:23012450-23012469 MS.gene039110:intron 40.0%
!! AAAGCATTGGCGTACATAGT+AGG - chr2.2:23013508-23013527 None:intergenic 40.0%
!! ATCACTGCCTGATGTTTTTG+TGG + chr2.2:23015207-23015226 MS.gene039110:CDS 40.0%
!! TATAGGTGTTGGAACCACAA+TGG + chr2.2:23015129-23015148 MS.gene039110:CDS 40.0%
!! TTTTTGGGGGTGATTAGCTA+AGG + chr2.2:23012352-23012371 MS.gene039110:intron 40.0%
!!! CAATTTTTTCCCCTTCCTGT+AGG + chr2.2:23013139-23013158 MS.gene039110:intron 40.0%
!!! CCTTTTTTGGTGTTTTCCCA+GGG + chr2.2:23014044-23014063 MS.gene039110:intron 40.0%
!!! GTTGTGTGCTTTTTCGTCAA+TGG + chr2.2:23012198-23012217 MS.gene039110:intron 40.0%
AACGGAGCAGCAATTATGGA+TGG + chr2.2:23013777-23013796 MS.gene039110:CDS 45.0%
AAGGCAATGCCAACACTACT+TGG - chr2.2:23012557-23012576 None:intergenic 45.0%
AAGGCCTATGTCCTACAAGT+GGG + chr2.2:23013060-23013079 MS.gene039110:intron 45.0%
ACAAAAGGTTCCGAGAGACA+AGG + chr2.2:23015513-23015532 MS.gene039110:CDS 45.0%
AGTCCTATGTGTGATGTACC+TGG + chr2.2:23013186-23013205 MS.gene039110:CDS 45.0%
ATGAAGTTCCGTTCAGGGAT+TGG - chr2.2:23014161-23014180 None:intergenic 45.0%
ATGATGGTTCAGGACCTTAC+CGG - chr2.2:23013264-23013283 None:intergenic 45.0%
ATTCTTCACAGCTACCACTC+TGG - chr2.2:23015604-23015623 None:intergenic 45.0%
CAATGGCTGTTGATGCTGAT+CGG + chr2.2:23012215-23012234 MS.gene039110:intron 45.0%
CCCTGGGAAAACACCAAAAA+AGG - chr2.2:23014047-23014066 None:intergenic 45.0%
CGTTGATCATGAGCCATGTT+TGG + chr2.2:23014899-23014918 MS.gene039110:intron 45.0%
CTTGCAGATGTTAGGTTCTG+TGG + chr2.2:23014340-23014359 MS.gene039110:intron 45.0%
GAACCTAACATCTGCAAGTC+AGG - chr2.2:23014338-23014357 None:intergenic 45.0%
GATATGACTTCAGGAGACAG+CGG - chr2.2:23012079-23012098 None:intergenic 45.0%
GCTCAGAAGTTTGTGGTTGA+GGG - chr2.2:23013836-23013855 None:intergenic 45.0%
GCTTAACGGAGCAGCAATTA+TGG + chr2.2:23013773-23013792 MS.gene039110:CDS 45.0%
GGAAATGCTAAGAGCCTGTT+TGG - chr2.2:23014544-23014563 None:intergenic 45.0%
GGAGAAATGAAGTTCCGTTC+AGG - chr2.2:23014167-23014186 None:intergenic 45.0%
GGTAGCTGTGAAGAATGACT+TGG + chr2.2:23015608-23015627 MS.gene039110:CDS 45.0%
TACCTTTCCAGCACAATAGG+GGG - chr2.2:23015413-23015432 None:intergenic 45.0%
TGAAGTTCCGTTCAGGGATT+GGG - chr2.2:23014160-23014179 None:intergenic 45.0%
TGAGACCTTTCCTTGTCTCT+CGG - chr2.2:23015526-23015545 None:intergenic 45.0%
TGCTCAGAAGTTTGTGGTTG+AGG - chr2.2:23013837-23013856 None:intergenic 45.0%
TGGTCTCAGCCAATTGGAAA+TGG - chr2.2:23014873-23014892 None:intergenic 45.0%
TGTCAAAGTGGGATCCATTG+TGG - chr2.2:23015146-23015165 None:intergenic 45.0%
TGTGGCACATGGAAAGTCAA+CGG + chr2.2:23012272-23012291 MS.gene039110:CDS 45.0%
TGTTGACATCCAACGTACTC+AGG - chr2.2:23012048-23012067 None:intergenic 45.0%
TTCTGAGCATTTAGCTGCTG+TGG + chr2.2:23013848-23013867 MS.gene039110:CDS 45.0%
! AACTATGCACATGGTCTTGC+AGG + chr2.2:23015452-23015471 MS.gene039110:intron 45.0%
! GAAATAAAAGGAGGCGTAGC+TGG + chr2.2:23014245-23014264 MS.gene039110:CDS 45.0%
! GTAGACGTGTTGAGAAGCAT+TGG + chr2.2:23015688-23015707 MS.gene039110:CDS 45.0%
! TGACCTGACTTGCAGATGTT+AGG + chr2.2:23014332-23014351 MS.gene039110:intron 45.0%
!! AGCTGGTGGAAGTATTCTGA+GGG + chr2.2:23014262-23014281 MS.gene039110:CDS 45.0%
!! CTTTTGTTGATTGCCCGGTA+AGG + chr2.2:23013247-23013266 MS.gene039110:intron 45.0%
!! TAGCTGGTGGAAGTATTCTG+AGG + chr2.2:23014261-23014280 MS.gene039110:CDS 45.0%
!!! CCCTTTTTTGGTGTTTTCCC+AGG + chr2.2:23014043-23014062 MS.gene039110:intron 45.0%
!!! GGTGCTTTTTCGTATGGTGT+GGG + chr2.2:23013600-23013619 MS.gene039110:intron 45.0%
!!! GTGCTTTTTCGTATGGTGTG+GGG + chr2.2:23013601-23013620 MS.gene039110:intron 45.0%
!!! TGGTGCTTTTTCGTATGGTG+TGG + chr2.2:23013599-23013618 MS.gene039110:intron 45.0%
!!! TATATTTCAATATTTTTTAT+AGG + chr2.2:23012128-23012147 MS.gene039110:intron 5.0%
AATGTCAACAGGTGCCAGAG+TGG + chr2.2:23015587-23015606 MS.gene039110:CDS 50.0%
ACCATAGGTCATGTGGCACA+TGG + chr2.2:23012261-23012280 MS.gene039110:CDS 50.0%
ACCTATAAGGCCTCCAGGAA+CGG - chr2.2:23015116-23015135 None:intergenic 50.0%
ACCTTTCCAGCACAATAGGG+GGG - chr2.2:23015412-23015431 None:intergenic 50.0%
ACTATCAGCAACAGTGCCCT+GGG - chr2.2:23014063-23014082 None:intergenic 50.0%
AGCAATCTTCTCTCCCTTGC+TGG - chr2.2:23015664-23015683 None:intergenic 50.0%
AGGTTCCGAGAGACAAGGAA+AGG + chr2.2:23015518-23015537 MS.gene039110:CDS 50.0%
CAAGGCCTATGTCCTACAAG+TGG + chr2.2:23013059-23013078 MS.gene039110:intron 50.0%
CACTTGTAGGACATAGGCCT+TGG - chr2.2:23013061-23013080 None:intergenic 50.0%
CATCAAGGGTGATACCAGCT+TGG - chr2.2:23015737-23015756 None:intergenic 50.0%
CGAGACTGCAAGAGACAAGT+AGG - chr2.2:23015254-23015273 None:intergenic 50.0%
CTGTCAGCACGTGTCAAAGT+GGG - chr2.2:23015157-23015176 None:intergenic 50.0%
CTTCAATTTGCCGTTCCTGG+AGG + chr2.2:23015103-23015122 MS.gene039110:CDS 50.0%
GAGCTTCAATTTGCCGTTCC+TGG + chr2.2:23015100-23015119 MS.gene039110:CDS 50.0%
GGAACAAGACCTGAGTACGT+TGG + chr2.2:23012036-23012055 MS.gene039110:CDS 50.0%
GGGTGATACCAGCTTGGATT+TGG - chr2.2:23015731-23015750 None:intergenic 50.0%
GTGAAGATGAACGGTGTCCA+AGG + chr2.2:23013041-23013060 MS.gene039110:CDS 50.0%
TAGGGCCTATGGAAGTGGAA+AGG + chr2.2:23013158-23013177 MS.gene039110:intron 50.0%
TCCATGTGCCACATGACCTA+TGG - chr2.2:23012265-23012284 None:intergenic 50.0%
TCCTGAAGTCATATCCCGTC+AGG + chr2.2:23012084-23012103 MS.gene039110:CDS 50.0%
TGATGGTTCAGGACCTTACC+GGG - chr2.2:23013263-23013282 None:intergenic 50.0%
TGGAGTAGATCGGTGTGCAT+CGG - chr2.2:23015051-23015070 None:intergenic 50.0%
TGGCGTACATAGTAGGCCTT+GGG - chr2.2:23013501-23013520 None:intergenic 50.0%
TTCCATAGGCCCTACAGGAA+GGG - chr2.2:23013152-23013171 None:intergenic 50.0%
TTCTTGCTTCGACGGCTTCT+TGG + chr2.2:23015483-23015502 MS.gene039110:CDS 50.0%
TTGGCGTACATAGTAGGCCT+TGG - chr2.2:23013502-23013521 None:intergenic 50.0%
TTGTCTCTTGCAGTCTCGCT+TGG + chr2.2:23015256-23015275 MS.gene039110:intron 50.0%
! ACTTCGGTGAGGGAAAGCAT+TGG - chr2.2:23013521-23013540 None:intergenic 50.0%
! ATAAAAGGAGGCGTAGCTGG+TGG + chr2.2:23014248-23014267 MS.gene039110:CDS 50.0%
! GTCTCTCGGAACCTTTTGTC+CGG - chr2.2:23015512-23015531 None:intergenic 50.0%
! TTTGACACGTGCTGACAGGT+TGG + chr2.2:23015159-23015178 MS.gene039110:CDS 50.0%
!! AGGTTGGTAGGGCAAGTTCT+TGG + chr2.2:23015175-23015194 MS.gene039110:CDS 50.0%
!! CTTCTTGGTGTCCGGACAAA+AGG + chr2.2:23015498-23015517 MS.gene039110:CDS 50.0%
!! GAGAAGCATTGGCGTCTCAT+CGG + chr2.2:23015699-23015718 MS.gene039110:CDS 50.0%
CACTATCAGCAACAGTGCCC+TGG - chr2.2:23014064-23014083 None:intergenic 55.0%
CCAACACCTATAAGGCCTCC+AGG - chr2.2:23015121-23015140 None:intergenic 55.0%
CCTGTCAGCACGTGTCAAAG+TGG - chr2.2:23015158-23015177 None:intergenic 55.0%
CTTCCATAGGCCCTACAGGA+AGG - chr2.2:23013153-23013172 None:intergenic 55.0%
GCCTGACGGGATATGACTTC+AGG - chr2.2:23012088-23012107 None:intergenic 55.0%
GCGTACATAGTAGGCCTTGG+GGG - chr2.2:23013499-23013518 None:intergenic 55.0%
GCTCATGATCAACGGGCACA+TGG - chr2.2:23014893-23014912 None:intergenic 55.0%
GGCACATGGTCTCAGCCAAT+TGG - chr2.2:23014879-23014898 None:intergenic 55.0%
GGCAGGTACCATAGGTCATG+TGG + chr2.2:23012254-23012273 MS.gene039110:intron 55.0%
GGCGTACATAGTAGGCCTTG+GGG - chr2.2:23013500-23013519 None:intergenic 55.0%
GGGCAAGTTCTTGGAGAGGT+TGG + chr2.2:23015184-23015203 MS.gene039110:CDS 55.0%
GGTAGGGCAAGTTCTTGGAG+AGG + chr2.2:23015180-23015199 MS.gene039110:CDS 55.0%
TCAGTTCCCCCCTATTGTGC+TGG + chr2.2:23015403-23015422 MS.gene039110:intron 55.0%
TCCACTTCCATAGGCCCTAC+AGG - chr2.2:23013157-23013176 None:intergenic 55.0%
TCCATAGGCCCTACAGGAAG+GGG - chr2.2:23013151-23013170 None:intergenic 55.0%
TCCCCCCTATTGTGCTGGAA+AGG + chr2.2:23015408-23015427 MS.gene039110:intron 55.0%
TCCTGTAGGGCCTATGGAAG+TGG + chr2.2:23013153-23013172 MS.gene039110:intron 55.0%
! CCACTTTGACACGTGCTGAC+AGG + chr2.2:23015155-23015174 MS.gene039110:CDS 55.0%
! CCTGGAGGCCTTATAGGTGT+TGG + chr2.2:23015118-23015137 MS.gene039110:CDS 55.0%
!! ACACGTGCTGACAGGTTGGT+AGG + chr2.2:23015163-23015182 MS.gene039110:CDS 55.0%
!! CACGTGCTGACAGGTTGGTA+GGG + chr2.2:23015164-23015183 MS.gene039110:CDS 55.0%
!! TTCGACGGCTTCTTGGTGTC+CGG + chr2.2:23015490-23015509 MS.gene039110:CDS 55.0%
CTCCCTTGCTGGTGCACACA+GGG - chr2.2:23015653-23015672 None:intergenic 60.0%
GGGGGCAGGAGGAACATCAA+GGG - chr2.2:23015751-23015770 None:intergenic 60.0%
TAACTCAGAAGGGGGGCAGG+AGG - chr2.2:23015762-23015781 None:intergenic 60.0%
TCCCCTGTGTGCACCAGCAA+GGG + chr2.2:23015648-23015667 MS.gene039110:CDS 60.0%
TCCCCTTCCTGTAGGGCCTA+TGG + chr2.2:23013147-23013166 MS.gene039110:intron 60.0%
TCCCTTGCTGGTGCACACAG+GGG - chr2.2:23015652-23015671 None:intergenic 60.0%
TCTCCCTTGCTGGTGCACAC+AGG - chr2.2:23015654-23015673 None:intergenic 60.0%
TTCCCCTGTGTGCACCAGCA+AGG + chr2.2:23015647-23015666 MS.gene039110:CDS 60.0%
! CATTGGCGTCTCATCGGCTG+GGG + chr2.2:23015705-23015724 MS.gene039110:CDS 60.0%
! GCATTGGCGTCTCATCGGCT+GGG + chr2.2:23015704-23015723 MS.gene039110:CDS 60.0%
! GCCGTTCCTGGAGGCCTTAT+AGG + chr2.2:23015112-23015131 MS.gene039110:CDS 60.0%
!! AGCATTGGCGTCTCATCGGC+TGG + chr2.2:23015703-23015722 MS.gene039110:CDS 60.0%
GGCTGGGGCCAAATCCAAGC+TGG + chr2.2:23015720-23015739 MS.gene039110:CDS 65.0%
GGGGGGCAGGAGGAACATCA+AGG - chr2.2:23015752-23015771 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 23012016 23015782 23012016 ID=MS.gene039110
chr2.2 mRNA 23012016 23015782 23012016 ID=MS.gene039110.t1;Parent=MS.gene039110
chr2.2 exon 23012016 23012121 23012016 ID=MS.gene039110.t1.exon1;Parent=MS.gene039110.t1
chr2.2 CDS 23012016 23012121 23012016 ID=cds.MS.gene039110.t1;Parent=MS.gene039110.t1
chr2.2 exon 23012259 23012320 23012259 ID=MS.gene039110.t1.exon2;Parent=MS.gene039110.t1
chr2.2 CDS 23012259 23012320 23012259 ID=cds.MS.gene039110.t1;Parent=MS.gene039110.t1
chr2.2 exon 23012965 23013077 23012965 ID=MS.gene039110.t1.exon3;Parent=MS.gene039110.t1
chr2.2 CDS 23012965 23013077 23012965 ID=cds.MS.gene039110.t1;Parent=MS.gene039110.t1
chr2.2 exon 23013161 23013263 23013161 ID=MS.gene039110.t1.exon4;Parent=MS.gene039110.t1
chr2.2 CDS 23013161 23013263 23013161 ID=cds.MS.gene039110.t1;Parent=MS.gene039110.t1
chr2.2 exon 23013747 23013974 23013747 ID=MS.gene039110.t1.exon5;Parent=MS.gene039110.t1
chr2.2 CDS 23013747 23013974 23013747 ID=cds.MS.gene039110.t1;Parent=MS.gene039110.t1
chr2.2 exon 23014065 23014283 23014065 ID=MS.gene039110.t1.exon6;Parent=MS.gene039110.t1
chr2.2 CDS 23014065 23014283 23014065 ID=cds.MS.gene039110.t1;Parent=MS.gene039110.t1
chr2.2 exon 23014977 23015237 23014977 ID=MS.gene039110.t1.exon7;Parent=MS.gene039110.t1
chr2.2 CDS 23014977 23015237 23014977 ID=cds.MS.gene039110.t1;Parent=MS.gene039110.t1
chr2.2 exon 23015474 23015782 23015474 ID=MS.gene039110.t1.exon8;Parent=MS.gene039110.t1
chr2.2 CDS 23015474 23015782 23015474 ID=cds.MS.gene039110.t1;Parent=MS.gene039110.t1
Gene Sequence

>MS.gene039110

ATGGCTCGGAGGGGGTTGATGGAACAAGACCTGAGTACGTTGGATGTCAACAAATTGCATCCGCTGTCTCCTGAAGTCATATCCCGTCAGGCTACTATCAATATTGGTAATATATATTTCAATATTTTTTATAGGAACATGTTCAAATTTGCTGCAATTACATAACTAGAAATTCAAAAAAAGTTGTGTGCTTTTTCGTCAATGGCTGTTGATGCTGATCGGTAATGAAATTTATCTTGGCAGGTACCATAGGTCATGTGGCACATGGAAAGTCAACGGTTGTGAAAGCAATATCAGGTGTTCAGGTATGCCCTTGTATTATGTCATTCTCTACTTTTTTTGGGGGTGATTAGCTAAGGATAGTGCTGCTTAACTGTACATTATAATCTGTAAATGTGTAATTTATGGTATATAGTATGTGGAAATATTCTGAATGATGGATCTATTTACGCCAAGGTGAATTGTTTCAAACTGAAGAAAGTATATAGCATTTAATCATTGTCATAACTCATCGCCTACAATTTATAATTTTCGAAATCCAAGTAGTGTTGGCATTGCCTTGAATTTATATTTTTCTCAATCCAATTACTAAGCGGGTACATGAAATTTGTGAAATCTTAGTTGTCATAAAATCATGACATGTGCTTGTGCCTTGTTTCAATATATGAATTTTAGTGTGTCGTAGATCGTTGTGTAGTTAGCCTCATCTGTGTAACTATCTGCTTTATGGAAAAGCCGTCTCTCCAAAAATTGATTCCTAGTGGTTACATAGTTGATTGATAATATTTAGATCAATTGAATTTTCTACTTGTTTTTTTGCATTTTTAGTTTTGAATTTTGATAAAGGATTATAGATAACCATGATATATGTATTTTAGTTCATTTTCCTTGAGCTTTGATAATGTATAGTTAAACTGTTGACCTATGTTCTCCCATGAATGTTTTACAGACTGTGCGATTTAAAAATGAGTTGGAACGTAACATTACAATCAAGCTCGGTTATGCGAATGCAAAAATATACAAGTGTGAAGATGAACGGTGTCCAAGGCCTATGTCCTACAAGTGGGTATTATTTTAGATTTGTCATTTTAGTATTAGGTCATTCATCTTTTGGTAACATGATCAATTTTTTCCCCTTCCTGTAGGGCCTATGGAAGTGGAAAGGAAGATAGTCCTATGTGTGATGTACCTGGATTTGAAAATTCCAAGATGAAATTGCTGAGACATGTTTCTTTTGTTGATTGCCCGGTAAGGTCCTGAACCATCATTTGTTATATAGGGTTGTTTTAGGCATAATTTCATAAGATTTTAGTATGATATAGGGGGATATACTTTCATATTCTTGCACAATTGGTTTTATTTTACATTGGTTGCCCTCGTAATTGTTTGCTCTCCTTATCATATTATCTCTCAATTCTTTAATCCCTGGAAGATATGTGTGTTTTAGTCCATGTATATGTACTATTAAATTAAACGTATACCCCCAAGGCCTACTATGTACGCCAATGCTTTCCCTCACCGAAGTTAATTTTTTTATGCAATTAAAGTGGTTTGCATTCAATGGTACGGAGTTAAAAGAATTATGGTGCTTTTTCGTATGGTGTGGGGTTTTTCATATAATGGGGTATCATTTTTTGCCATCTATGCTATATTATTGAATACCTCTTTAGCTATTATTTTTTTTTTTTTTTTACATCTGTGATATTTGTTTTACTGTTCCAATTTCTGTAGGGACATGATATTCTCATGGCTACTATGCTTAACGGAGCAGCAATTATGGATGGAGCTTTGCTACTCATTGCAGCTAATGAAAGTTGCCCTCAACCACAAACTTCTGAGCATTTAGCTGCTGTGGAAATTATGCGTCTACAACACATAATAATCCTTCAGAACAAGGTAGACTTGATTCAAGAAAATGTGGCTATCAACCAGCATGAAGCAATTCAGAAGTTTATACAAGTAAGTTTTCTATGAGGAGGTATAATTATACAAGTGAATCCCTTTTGAACAACATAAATGATACTCTCCCCTTTTTTGGTGTTTTCCCAGGGCACTGTTGCTGATAGTGCACCAGTAGTACCTATTTCAGCACAATTGAAGTATAATATTGATGTTGTGTGTGAGTACATCGTGAAAAAGATCCCAATCCCTGAACGGAACTTCATTTCTCCACCTAATATGATAGTAATTCGGTCATTTGATGTCAATAAACCTGGTTATGAAGTTGATGAAATAAAAGGAGGCGTAGCTGGTGGAAGTATTCTGAGGGTAAGTCTTTCTTTGGTCAATATTCCAAAAAGCATGTTTAATTTGCACTGACCTGACTTGCAGATGTTAGGTTCTGTGGTTTGATTGAACAATTTTCCATTTGCTGCTATCATTTTTAATTGCAAGAATGCCCCTTTGTTTTCATTTTGTATCTTGTTTTCTGTACAAATATTTGAAAAAAGACAACAGAGTGAAAACAAGGGGAAGCTTTTGCAATTTAAATGAAAAGTGGAAATGAAAATATATATTTTCTCAAACCAAACAGGCTCTTAGCATTTCCAATTCTATTGCTGTTTGGAATGATTTTTGCCTTTACCAATGCCTTGATTTATAACATTTATTTTAGACTTTCAAAGTGTTGTGCAAATAATGTGAAGAACGTGCAATATGATACATGGATGCTCAATAAGTGAGAAAAATGCCTTGTAATTTTTTACATCTTTCTTTCTTCCATAAAACCTTATGCATCCAATTTTTAGAATAACTTGATAGAAGGCTCCATATGCCATTCTATTTCCAAACAAGAAAATGGGACTTAACTCTGATGTTTTTTGTCTAAATCAATTGAATATGTTATGATCAATTTCCATTTCCAATTGGCTGAGACCATGTGCCCGTTGATCATGAGCCATGTTTGGGGTTAGACATTTGACACATTCTTTTTAAGCACATCGTACAATTTATTATTTGCAGGGTGTTTTAAAGGTCAACCAATTCATTGAAGTTCGACCTGGAATAGTTGTTAAAGATGAGAGTGGAAATATCCGATGCACACCGATCTACTCCAGAATAGTTTCACTATTTGCTGAACAAAATGAGCTTCAATTTGCCGTTCCTGGAGGCCTTATAGGTGTTGGAACCACAATGGATCCCACTTTGACACGTGCTGACAGGTTGGTAGGGCAAGTTCTTGGAGAGGTTGGATCACTGCCTGATGTTTTTGTGGAACTTGAGGTAAGTGACTACACCTACTTGTCTCTTGCAGTCTCGCTTGGTTTATCAATTCATAAGACAAATCAGGATAAAGATTAACATGTCCATTTCTCTGAAGTCTTTAGATGATTTACACTTGGTACTAATTTAGTGTCAAGAGTGTTGATCTTTTTTCTGTTATGGCACTCAGTTCCCCCCTATTGTGCTGGAAAGGTATTTTTTATTTTTTTTAATGAACTATGCACATGGTCTTGCAGGTAAACTTTTTCTTGCTTCGACGGCTTCTTGGTGTCCGGACAAAAGGTTCCGAGAGACAAGGAAAGGTCTCAAAGCTGACGAAAACAGAAATGCTAATGTTGAACATAGGATCAATGTCAACAGGTGCCAGAGTGGTAGCTGTGAAGAATGACTTGGCAAAGTTGCAACTTACTTCCCCTGTGTGCACCAGCAAGGGAGAGAAGATTGCTCTAAGTAGACGTGTTGAGAAGCATTGGCGTCTCATCGGCTGGGGCCAAATCCAAGCTGGTATCACCCTTGATGTTCCTCCTGCCCCCCTTCTGAGTTAA
Protein sequence

>MS.gene039110.t1

MARRGLMEQDLSTLDVNKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADSAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIRCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPDVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLTKTEMLMLNIGSMSTGARVVAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGITLDVPPAPLLS