Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038047.t1 | XP_013468417.1 | 99.7 | 379 | 1 | 0 | 1 | 379 | 1 | 379 | 2.40E-221 | 777.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038047.t1 | A2XAZ3 | 91.2 | 375 | 33 | 0 | 2 | 376 | 4 | 378 | 3.3e-206 | 718.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038047.t1 | A0A072VKC1 | 99.7 | 379 | 1 | 0 | 1 | 379 | 1 | 379 | 1.8e-221 | 777.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene047628 | MS.gene038047 | PPI |
| MS.gene99200 | MS.gene038047 | PPI |
| MS.gene90510 | MS.gene038047 | PPI |
| MS.gene83309 | MS.gene038047 | PPI |
| MS.gene56778 | MS.gene038047 | PPI |
| MS.gene49741 | MS.gene038047 | PPI |
| MS.gene73688 | MS.gene038047 | PPI |
| MS.gene038047 | MS.gene70145 | PPI |
| MS.gene042841 | MS.gene038047 | PPI |
| MS.gene041083 | MS.gene038047 | PPI |
| MS.gene015154 | MS.gene038047 | PPI |
| MS.gene038047 | MS.gene79768 | PPI |
| MS.gene010354 | MS.gene038047 | PPI |
| MS.gene069804 | MS.gene038047 | PPI |
| MS.gene030545 | MS.gene038047 | PPI |
| MS.gene011817 | MS.gene038047 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038047.t1 | MTR_1g069430 | 99.736 | 379 | 1 | 0 | 1 | 379 | 1 | 379 | 0.0 | 778 |
| MS.gene038047.t1 | MTR_7g099040 | 91.512 | 377 | 32 | 0 | 2 | 378 | 4 | 380 | 0.0 | 721 |
| MS.gene038047.t1 | MTR_3g089940 | 57.447 | 376 | 160 | 0 | 2 | 377 | 3 | 378 | 4.41e-166 | 469 |
| MS.gene038047.t1 | MTR_3g089977 | 56.800 | 375 | 162 | 0 | 3 | 377 | 4 | 378 | 8.16e-165 | 466 |
| MS.gene038047.t1 | MTR_3g089940 | 57.067 | 375 | 161 | 0 | 3 | 377 | 4 | 378 | 3.53e-164 | 465 |
| MS.gene038047.t1 | MTR_3g089970 | 56.533 | 375 | 163 | 0 | 3 | 377 | 5 | 379 | 1.38e-161 | 458 |
| MS.gene038047.t1 | MTR_3g089940 | 59.763 | 338 | 136 | 0 | 2 | 339 | 3 | 340 | 8.46e-152 | 432 |
| MS.gene038047.t1 | MTR_3g089940 | 59.347 | 337 | 137 | 0 | 3 | 339 | 4 | 340 | 4.05e-150 | 428 |
| MS.gene038047.t1 | MTR_6g068930 | 52.957 | 372 | 171 | 2 | 6 | 377 | 8 | 375 | 5.68e-143 | 411 |
| MS.gene038047.t1 | MTR_5g087710 | 50.802 | 374 | 182 | 2 | 6 | 377 | 16 | 389 | 1.83e-132 | 385 |
| MS.gene038047.t1 | MTR_7g068320 | 51.436 | 383 | 174 | 6 | 3 | 377 | 15 | 393 | 8.62e-132 | 383 |
| MS.gene038047.t1 | MTR_7g068330 | 49.340 | 379 | 187 | 4 | 3 | 377 | 8 | 385 | 3.24e-128 | 374 |
| MS.gene038047.t1 | MTR_3g079180 | 48.276 | 377 | 191 | 4 | 4 | 377 | 9 | 384 | 1.33e-125 | 367 |
| MS.gene038047.t1 | MTR_3g099460 | 47.619 | 378 | 192 | 4 | 5 | 377 | 13 | 389 | 3.54e-115 | 340 |
| MS.gene038047.t1 | MTR_3g099460 | 47.090 | 378 | 187 | 5 | 5 | 377 | 13 | 382 | 1.69e-111 | 331 |
| MS.gene038047.t1 | MTR_5g045710 | 44.094 | 381 | 202 | 6 | 1 | 377 | 1 | 374 | 8.94e-104 | 311 |
| MS.gene038047.t1 | MTR_0001s0660 | 41.316 | 380 | 213 | 4 | 1 | 377 | 1 | 373 | 9.81e-99 | 301 |
| MS.gene038047.t1 | MTR_3g099460 | 48.137 | 322 | 163 | 3 | 59 | 377 | 6 | 326 | 4.53e-97 | 292 |
| MS.gene038047.t1 | MTR_3g099460 | 51.237 | 283 | 132 | 4 | 5 | 282 | 13 | 294 | 3.02e-83 | 257 |
| MS.gene038047.t1 | MTR_3g079170 | 46.350 | 274 | 125 | 4 | 100 | 368 | 25 | 281 | 2.87e-82 | 253 |
| MS.gene038047.t1 | MTR_3g099460 | 50.530 | 283 | 127 | 5 | 5 | 282 | 13 | 287 | 1.80e-79 | 247 |
| MS.gene038047.t1 | MTR_5g045710 | 42.761 | 297 | 160 | 5 | 85 | 377 | 1 | 291 | 2.32e-72 | 228 |
| MS.gene038047.t1 | MTR_8g095220 | 30.790 | 367 | 238 | 10 | 11 | 368 | 55 | 414 | 5.59e-45 | 160 |
| MS.gene038047.t1 | MTR_8g095220 | 33.333 | 255 | 160 | 5 | 11 | 258 | 55 | 306 | 6.30e-38 | 139 |
| MS.gene038047.t1 | MTR_1g025950 | 26.829 | 287 | 174 | 9 | 36 | 315 | 38 | 295 | 4.11e-11 | 64.3 |
| MS.gene038047.t1 | MTR_5g031180 | 25.234 | 321 | 208 | 9 | 1 | 315 | 1 | 295 | 8.60e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038047.t1 | AT5G43940 | 91.467 | 375 | 32 | 0 | 1 | 375 | 1 | 375 | 0.0 | 718 |
| MS.gene038047.t1 | AT5G43940 | 88.372 | 387 | 33 | 1 | 1 | 375 | 1 | 387 | 0.0 | 709 |
| MS.gene038047.t1 | AT1G77120 | 58.047 | 379 | 159 | 0 | 1 | 379 | 1 | 379 | 7.36e-169 | 476 |
| MS.gene038047.t1 | AT5G24760 | 53.209 | 374 | 171 | 2 | 4 | 377 | 10 | 379 | 5.18e-148 | 424 |
| MS.gene038047.t1 | AT1G64710 | 51.053 | 380 | 183 | 2 | 1 | 377 | 1 | 380 | 2.24e-144 | 414 |
| MS.gene038047.t1 | AT1G32780 | 51.169 | 385 | 178 | 2 | 3 | 377 | 4 | 388 | 8.26e-141 | 406 |
| MS.gene038047.t1 | AT5G24760 | 52.542 | 354 | 164 | 2 | 24 | 377 | 1 | 350 | 1.05e-137 | 397 |
| MS.gene038047.t1 | AT5G24760 | 52.542 | 354 | 164 | 2 | 24 | 377 | 1 | 350 | 1.05e-137 | 397 |
| MS.gene038047.t1 | AT1G64710 | 49.860 | 357 | 176 | 2 | 24 | 377 | 1 | 357 | 6.91e-132 | 382 |
| MS.gene038047.t1 | AT5G42250 | 48.525 | 373 | 189 | 3 | 8 | 377 | 17 | 389 | 1.33e-129 | 377 |
| MS.gene038047.t1 | AT1G22430 | 49.604 | 379 | 188 | 3 | 2 | 377 | 8 | 386 | 9.76e-123 | 360 |
| MS.gene038047.t1 | AT1G22430 | 49.604 | 379 | 188 | 3 | 2 | 377 | 8 | 386 | 9.76e-123 | 360 |
| MS.gene038047.t1 | AT1G22440 | 46.825 | 378 | 198 | 3 | 3 | 377 | 7 | 384 | 1.57e-116 | 344 |
| MS.gene038047.t1 | AT4G22110 | 46.825 | 378 | 198 | 3 | 4 | 378 | 11 | 388 | 1.07e-115 | 342 |
| MS.gene038047.t1 | AT4G22110 | 46.825 | 378 | 198 | 3 | 4 | 378 | 11 | 388 | 1.07e-115 | 342 |
| MS.gene038047.t1 | AT1G64710 | 48.366 | 306 | 156 | 1 | 74 | 377 | 6 | 311 | 1.02e-108 | 321 |
| MS.gene038047.t1 | AT5G24760 | 54.118 | 255 | 117 | 0 | 123 | 377 | 11 | 265 | 5.45e-101 | 300 |
| MS.gene038047.t1 | AT1G22430 | 51.761 | 284 | 134 | 3 | 2 | 282 | 8 | 291 | 2.96e-92 | 279 |
| MS.gene038047.t1 | AT1G22430 | 50.570 | 263 | 127 | 3 | 2 | 261 | 8 | 270 | 1.59e-80 | 249 |
| MS.gene038047.t1 | AT1G22430 | 50.570 | 263 | 127 | 3 | 2 | 261 | 8 | 270 | 1.59e-80 | 249 |
| MS.gene038047.t1 | AT4G22110 | 50.000 | 244 | 120 | 2 | 4 | 245 | 11 | 254 | 1.02e-76 | 238 |
| MS.gene038047.t1 | AT5G63620 | 28.261 | 368 | 246 | 11 | 11 | 368 | 57 | 416 | 3.13e-40 | 147 |
| MS.gene038047.t1 | AT5G63620 | 27.717 | 368 | 248 | 11 | 11 | 368 | 57 | 416 | 2.74e-38 | 142 |
| MS.gene038047.t1 | AT5G63620 | 29.020 | 255 | 171 | 5 | 11 | 258 | 57 | 308 | 2.11e-32 | 124 |
| MS.gene038047.t1 | AT1G72680 | 26.606 | 327 | 207 | 9 | 10 | 331 | 11 | 309 | 1.67e-12 | 68.6 |
Find 95 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGTTTCTCATGTTCTTT+TGG | 0.179096 | 1.2:-52434637 | None:intergenic |
| AGAGAGCAGTGAAGAGAATT+TGG | 0.184420 | 1.2:-52431945 | None:intergenic |
| TTGGACAAAGTTTGTCTCCT+TGG | 0.327696 | 1.2:+52432784 | MS.gene038047:CDS |
| CTCTGTAATGAGGGCTGCTT+TGG | 0.332806 | 1.2:+52434726 | MS.gene038047:CDS |
| CTCAATGATCAGTGGTTTGT+TGG | 0.333659 | 1.2:-52431881 | None:intergenic |
| TTTGTGTAGCTGCGGTGGCC+TGG | 0.334485 | 1.2:+52431854 | MS.gene038047:intron |
| ACTTTGTCCAAAGGAGCTAT+AGG | 0.341052 | 1.2:-52432772 | None:intergenic |
| GTCTGGAAAGGAACAGCTTT+TGG | 0.342084 | 1.2:+52434969 | MS.gene038047:CDS |
| ATTGTAGGTGTTGCAGCATC+AGG | 0.342934 | 1.2:+52434903 | MS.gene038047:CDS |
| CAGTGGTTTGTTGGGTTCCC+AGG | 0.344723 | 1.2:-52431872 | None:intergenic |
| GATTGACCCTATAGCTCCTT+TGG | 0.356764 | 1.2:+52432765 | MS.gene038047:CDS |
| GGCAAAGTTCGTTCTGCTAC+TGG | 0.357593 | 1.2:+52432619 | MS.gene038047:CDS |
| TCAACTATGACCTGCTGAAT+TGG | 0.361132 | 1.2:-52434655 | None:intergenic |
| GTTGCAAATTTGCAGGGGTG+GGG | 0.363853 | 1.2:+52434870 | MS.gene038047:intron |
| AGTTGGTAACCGGACGCGTC+TGG | 0.370613 | 1.2:+52434952 | MS.gene038047:CDS |
| ACGAACTTTGCCACAAAGAT+TGG | 0.373506 | 1.2:-52432608 | None:intergenic |
| GCAGGTGCATCAAGGATTAT+TGG | 0.375328 | 1.2:+52434413 | MS.gene038047:CDS |
| CGTTCAAGTGGCTCCGCCTC+AGG | 0.390424 | 1.2:+52431906 | MS.gene038047:CDS |
| GAAAGAGAGAAAACCTTTGC+AGG | 0.400826 | 1.2:-52431751 | None:intergenic |
| TTTCAGGCCTTGGAGCTGTC+TGG | 0.400980 | 1.2:+52434214 | MS.gene038047:intron |
| TCAATGATCAGTGGTTTGTT+GGG | 0.417853 | 1.2:-52431880 | None:intergenic |
| TACTTTGCAGCGAAGAACTT+TGG | 0.420217 | 1.2:+52434595 | MS.gene038047:intron |
| ATACATGGGAAAAGACCTTC+AGG | 0.420413 | 1.2:-52432111 | None:intergenic |
| CTTGGATGTGGTGTTCCAAC+TGG | 0.434603 | 1.2:+52432802 | MS.gene038047:CDS |
| TTGCAAATTTGCAGGGGTGG+GGG | 0.444650 | 1.2:+52434871 | MS.gene038047:intron |
| TTGTGTAGCTGCGGTGGCCT+GGG | 0.445755 | 1.2:+52431855 | MS.gene038047:intron |
| GATAGTAATAAGTTTGAAAG+AGG | 0.451239 | 1.2:+52434446 | MS.gene038047:CDS |
| AACACTGCAAAGGTGGAAGC+AGG | 0.460157 | 1.2:+52434237 | MS.gene038047:CDS |
| TCTCATATTGCAGGAAATCA+AGG | 0.460977 | 1.2:+52435434 | MS.gene038047:intron |
| GTTCCCATAAAATGATAGAT+AGG | 0.462299 | 1.2:-52432694 | None:intergenic |
| CATTGACAGAAAAGCGACTC+TGG | 0.475509 | 1.2:-52432666 | None:intergenic |
| CTTTGTCCAAAGGAGCTATA+GGG | 0.481126 | 1.2:-52432771 | None:intergenic |
| CCACATTCAGCTTGGTAACA+AGG | 0.482604 | 1.2:-52432556 | None:intergenic |
| TGTTCCTTTCCAGACGCGTC+CGG | 0.489222 | 1.2:-52434961 | None:intergenic |
| TACTTGGTCATGAAGCTGCT+GGG | 0.496650 | 1.2:+52432133 | MS.gene038047:CDS |
| TGCTTTGGAATGCTGCCATA+AGG | 0.496951 | 1.2:+52434741 | MS.gene038047:CDS |
| GGTGTTACTGAAGTTAAGCC+AGG | 0.497127 | 1.2:+52432520 | MS.gene038047:CDS |
| TACATTCTCCACATTCAGCT+TGG | 0.499906 | 1.2:-52432564 | None:intergenic |
| AACAGTGTACTGACTAAAAG+TGG | 0.500474 | 1.2:-52432719 | None:intergenic |
| AAGTATTTGTTTACAAGCCA+AGG | 0.501404 | 1.2:-52435017 | None:intergenic |
| GCTGAGGGTGCAAAAGCTGC+AGG | 0.504956 | 1.2:+52434395 | MS.gene038047:CDS |
| TAAAGGATTGTGGAAAGTGT+TGG | 0.510104 | 1.2:+52432493 | MS.gene038047:intron |
| ATACTTGGTCATGAAGCTGC+TGG | 0.512011 | 1.2:+52432132 | MS.gene038047:CDS |
| CAAGTGGCTCCGCCTCAGGC+TGG | 0.512652 | 1.2:+52431910 | MS.gene038047:CDS |
| TACTCACAATTTGACTCTTG+CGG | 0.514412 | 1.2:+52435470 | MS.gene038047:CDS |
| GGCTCCGCCTCAGGCTGGTG+AGG | 0.514764 | 1.2:+52431915 | MS.gene038047:CDS |
| GCTTCATGACCAAGTATACA+TGG | 0.520566 | 1.2:-52432126 | None:intergenic |
| CGTCCGGTTACCAACTGAAA+AGG | 0.524104 | 1.2:-52434945 | None:intergenic |
| TCAGGCAAAACCAATCTTTG+TGG | 0.524331 | 1.2:+52432598 | MS.gene038047:CDS |
| AAAGTTTGTCTCCTTGGATG+TGG | 0.526214 | 1.2:+52432790 | MS.gene038047:CDS |
| GTTCGTTCTGCTACTGGAGT+CGG | 0.530547 | 1.2:+52432625 | MS.gene038047:CDS |
| AGAGCCGATCACAAGTGCCT+TGG | 0.538589 | 1.2:+52435000 | MS.gene038047:CDS |
| CAAGCCAAGGCACTTGTGAT+CGG | 0.551185 | 1.2:-52435004 | None:intergenic |
| ACATGAGAAACCAATTCAGC+AGG | 0.554819 | 1.2:+52434645 | MS.gene038047:CDS |
| CAAGGGATGACATGATCCCC+TGG | 0.556593 | 1.2:-52432538 | None:intergenic |
| CAAAAGCTGCAGGTGCATCA+AGG | 0.558420 | 1.2:+52434405 | MS.gene038047:CDS |
| TACATTGAACAGGTTGCTGA+GGG | 0.568784 | 1.2:+52434380 | MS.gene038047:intron |
| ATATATTTGTGTAGCTGCGG+TGG | 0.570764 | 1.2:+52431849 | MS.gene038047:intron |
| CACATTCAGCTTGGTAACAA+GGG | 0.574689 | 1.2:-52432555 | None:intergenic |
| GTCACACTGATGCTTACACT+TGG | 0.575915 | 1.2:+52431968 | MS.gene038047:CDS |
| GGCATCCTCCTTCGTGCATG+AGG | 0.577171 | 1.2:-52435512 | None:intergenic |
| TTGGAAATGTCTCTGTAATG+AGG | 0.579912 | 1.2:+52434716 | MS.gene038047:CDS |
| TTACATTGAACAGGTTGCTG+AGG | 0.584031 | 1.2:+52434379 | MS.gene038047:intron |
| TCCATTTCGATGGCTACTCA+AGG | 0.584293 | 1.2:+52431717 | None:intergenic |
| GGACAAGTCATCACCTGCAA+AGG | 0.586101 | 1.2:+52431738 | MS.gene038047:CDS |
| CCTTGTTACCAAGCTGAATG+TGG | 0.588304 | 1.2:+52432556 | MS.gene038047:CDS |
| GTAACCGGACGCGTCTGGAA+AGG | 0.596417 | 1.2:+52434957 | MS.gene038047:CDS |
| TGCTTACACTTGGAGCGGCA+AGG | 0.603905 | 1.2:+52431978 | MS.gene038047:CDS |
| TGGAAATGTCTCTGTAATGA+GGG | 0.604267 | 1.2:+52434717 | MS.gene038047:CDS |
| GTCATAGTTGATCTCACAGA+TGG | 0.604774 | 1.2:+52434667 | MS.gene038047:CDS |
| TGTCTGGAACACTGCAAAGG+TGG | 0.611289 | 1.2:+52434230 | MS.gene038047:CDS |
| TTGTAGGTGTTGCAGCATCA+GGG | 0.611478 | 1.2:+52434904 | MS.gene038047:CDS |
| GTGTTACTGAAGTTAAGCCA+GGG | 0.611556 | 1.2:+52432521 | MS.gene038047:CDS |
| CGAACCTCACCAGCCTGAGG+CGG | 0.616888 | 1.2:-52431919 | None:intergenic |
| TTTGACCTCATGCACGAAGG+AGG | 0.617349 | 1.2:+52435507 | MS.gene038047:CDS |
| CAGTTGGAACACCACATCCA+AGG | 0.618762 | 1.2:-52432801 | None:intergenic |
| ACACTGCAAAGGTGGAAGCA+GGG | 0.618872 | 1.2:+52434238 | MS.gene038047:CDS |
| AGGAGACAAACTTTGTCCAA+AGG | 0.623797 | 1.2:-52432781 | None:intergenic |
| ATAGTTGATCTCACAGATGG+TGG | 0.624291 | 1.2:+52434670 | MS.gene038047:CDS |
| GATCATTGAGGACGTTCAAG+TGG | 0.627810 | 1.2:+52431894 | MS.gene038047:CDS |
| CAGTGTTCCAGACAGCTCCA+AGG | 0.631258 | 1.2:-52434221 | None:intergenic |
| CAACAAACCACTGATCATTG+AGG | 0.637832 | 1.2:+52431882 | MS.gene038047:CDS |
| TGAACGTCCTCAATGATCAG+TGG | 0.641268 | 1.2:-52431889 | None:intergenic |
| AGCTGTCTGGAACACTGCAA+AGG | 0.650906 | 1.2:+52434227 | MS.gene038047:CDS |
| TGTTGTTCATGATGTTAGTG+TGG | 0.664913 | 1.2:+52432738 | MS.gene038047:CDS |
| ACTGATGCTTACACTTGGAG+CGG | 0.665464 | 1.2:+52431973 | MS.gene038047:CDS |
| ATTCGAACCTCACCAGCCTG+AGG | 0.683189 | 1.2:-52431922 | None:intergenic |
| CTTCATGACCAAGTATACAT+GGG | 0.687289 | 1.2:-52432125 | None:intergenic |
| TGTAAACAAATACTTAAACA+AGG | 0.690321 | 1.2:+52435025 | MS.gene038047:CDS |
| GCATTTGACCTCATGCACGA+AGG | 0.691629 | 1.2:+52435504 | MS.gene038047:CDS |
| ATTGTGGAAAGTGTTGGAGA+AGG | 0.694479 | 1.2:+52432499 | MS.gene038047:CDS |
| TGTTACTGAAGTTAAGCCAG+GGG | 0.697820 | 1.2:+52432522 | MS.gene038047:CDS |
| AGTGTACTGACTAAAAGTGG+AGG | 0.702112 | 1.2:-52432716 | None:intergenic |
| CATGCATTGCAAGCACACAA+CGG | 0.702427 | 1.2:-52435536 | None:intergenic |
| GCATTGCAAGCACACAACGG+AGG | 0.702770 | 1.2:-52435533 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACAATATATAATATGTTT+TGG | + | chr1.2:52434846-52434865 | MS.gene038047:intron | 10.0% |
| !! | AATATATGTATATGATAACA+AGG | - | chr1.2:52431836-52431855 | None:intergenic | 15.0% |
| !! | ATATTACCATTGTTATAAAA+TGG | - | chr1.2:52432044-52432063 | None:intergenic | 15.0% |
| !! | TATATATATATATACACACA+CGG | - | chr1.2:52432172-52432191 | None:intergenic | 15.0% |
| !! | TTTGTATTAGGAATATATAT+TGG | + | chr1.2:52434514-52434533 | MS.gene038047:intron | 15.0% |
| !!! | ATTTTAATGCTTACTAATAA+GGG | + | chr1.2:52435394-52435413 | MS.gene038047:intron | 15.0% |
| !!! | TAATTTTCTCAAATTATGAA+CGG | - | chr1.2:52433400-52433419 | None:intergenic | 15.0% |
| !!! | TATTTTAATGCTTACTAATA+AGG | + | chr1.2:52435393-52435412 | MS.gene038047:intron | 15.0% |
| !! | AATATGCAGTTTATATAAAC+AGG | - | chr1.2:52435314-52435333 | None:intergenic | 20.0% |
| !! | ATATGCAGTTTATATAAACA+GGG | - | chr1.2:52435313-52435332 | None:intergenic | 20.0% |
| !! | GATATATTCAAATGAGATTA+GGG | + | chr1.2:52433574-52433593 | MS.gene038047:intron | 20.0% |
| !! | TAAATTAAAATCTCCATGTT+TGG | - | chr1.2:52435128-52435147 | None:intergenic | 20.0% |
| !! | TATGAGATAAATATTGTGTT+AGG | - | chr1.2:52435421-52435440 | None:intergenic | 20.0% |
| !! | TCGAAAAAAAATTCAAAACT+TGG | + | chr1.2:52433623-52433642 | MS.gene038047:intron | 20.0% |
| !! | TGTAAACAAATACTTAAACA+AGG | + | chr1.2:52435025-52435044 | MS.gene038047:CDS | 20.0% |
| !! | TTCATAGATTATGATTATGA+TGG | + | chr1.2:52432455-52432474 | MS.gene038047:intron | 20.0% |
| !!! | ATTATTTTGAGTAATGTTTC+AGG | + | chr1.2:52434198-52434217 | MS.gene038047:intron | 20.0% |
| !!! | ATTTTTGCTAATGATAAAGT+AGG | + | chr1.2:52435161-52435180 | MS.gene038047:intron | 20.0% |
| !!! | TTAGTTAGTAAGTTGATATT+AGG | - | chr1.2:52433954-52433973 | None:intergenic | 20.0% |
| !!! | TTTTAATGCTTACTAATAAG+GGG | + | chr1.2:52435395-52435414 | MS.gene038047:intron | 20.0% |
| ! | AATTGAGATGAATAGAAGAA+AGG | - | chr1.2:52431776-52431795 | None:intergenic | 25.0% |
| ! | ACAAGGAAAAAGAATGTATT+AGG | - | chr1.2:52431819-52431838 | None:intergenic | 25.0% |
| ! | ATCATTAAAAACTTACCAGT+TGG | - | chr1.2:52432820-52432839 | None:intergenic | 25.0% |
| ! | ATTGAAAGAGAAGATACAAA+AGG | + | chr1.2:52433763-52433782 | MS.gene038047:intron | 25.0% |
| ! | ATTGTCTAATATCCACATAT+AGG | + | chr1.2:52433236-52433255 | MS.gene038047:intron | 25.0% |
| ! | CAATATTCTATATCCTAACA+GGG | + | chr1.2:52434009-52434028 | MS.gene038047:intron | 25.0% |
| ! | CAATATTTATCTCATATTGC+AGG | + | chr1.2:52435425-52435444 | MS.gene038047:intron | 25.0% |
| ! | CTAATAGTAATACATGACTT+TGG | + | chr1.2:52433552-52433571 | MS.gene038047:intron | 25.0% |
| ! | GATAGTAATAAGTTTGAAAG+AGG | + | chr1.2:52434446-52434465 | MS.gene038047:CDS | 25.0% |
| ! | GATGTAATAATCACATATGT+CGG | - | chr1.2:52432346-52432365 | None:intergenic | 25.0% |
| ! | GGATATATTCAAATGAGATT+AGG | + | chr1.2:52433573-52433592 | MS.gene038047:intron | 25.0% |
| ! | GTATTACTATTAGAGTTAAG+TGG | - | chr1.2:52433545-52433564 | None:intergenic | 25.0% |
| ! | GTTTAATGTATGGAATGAAA+TGG | - | chr1.2:52435074-52435093 | None:intergenic | 25.0% |
| ! | TAATATGAAAATCTAGCTAC+TGG | - | chr1.2:52434324-52434343 | None:intergenic | 25.0% |
| ! | TATCAATTGAATGGGATTAT+AGG | + | chr1.2:52433740-52433759 | MS.gene038047:intron | 25.0% |
| ! | TCAATATTCTATATCCTAAC+AGG | + | chr1.2:52434008-52434027 | MS.gene038047:intron | 25.0% |
| ! | TCATTCCATACATTAAACTT+AGG | + | chr1.2:52435076-52435095 | MS.gene038047:intron | 25.0% |
| ! | TCTGTTACTATCAATTGAAT+GGG | + | chr1.2:52433732-52433751 | MS.gene038047:intron | 25.0% |
| ! | TGGATGCAATATAAATGATT+TGG | - | chr1.2:52433080-52433099 | None:intergenic | 25.0% |
| ! | TGTGAAATAGGCAATTAATT+GGG | - | chr1.2:52435277-52435296 | None:intergenic | 25.0% |
| ! | TGTTATATAAGAAAAGAGCT+TGG | + | chr1.2:52432881-52432900 | MS.gene038047:intron | 25.0% |
| ! | TTCTGTTACTATCAATTGAA+TGG | + | chr1.2:52433731-52433750 | MS.gene038047:intron | 25.0% |
| ! | TTGAATGTAACCAAATATGT+TGG | + | chr1.2:52433426-52433445 | MS.gene038047:intron | 25.0% |
| ! | TTGTGAAATAGGCAATTAAT+TGG | - | chr1.2:52435278-52435297 | None:intergenic | 25.0% |
| !! | AAAGCCTATCTATCATTTTA+TGG | + | chr1.2:52432690-52432709 | MS.gene038047:CDS | 25.0% |
| !! | AAGCCTATCTATCATTTTAT+GGG | + | chr1.2:52432691-52432710 | MS.gene038047:CDS | 25.0% |
| !! | TGATTATGATGGTATGTTTT+TGG | + | chr1.2:52432466-52432485 | MS.gene038047:intron | 25.0% |
| !! | TTCTATTCGGTTTTTGTATT+AGG | + | chr1.2:52434502-52434521 | MS.gene038047:intron | 25.0% |
| !!! | TATCAATGTTACTTGCTTTT+CGG | + | chr1.2:52434473-52434492 | MS.gene038047:intron | 25.0% |
| !!! | TCTGATATGGTTTTAAATTG+TGG | + | chr1.2:52432962-52432981 | MS.gene038047:intron | 25.0% |
| AAACTCTTGAATTCTTGGAA+AGG | - | chr1.2:52435230-52435249 | None:intergenic | 30.0% | |
| AAATGAGATTAGGGTATGTT+AGG | + | chr1.2:52433583-52433602 | MS.gene038047:intron | 30.0% | |
| AAGTATTTGTTTACAAGCCA+AGG | - | chr1.2:52435020-52435039 | None:intergenic | 30.0% | |
| AATAACTTGAATTCGTAGCA+GGG | - | chr1.2:52433200-52433219 | None:intergenic | 30.0% | |
| AATACAAAACATACCCTGTT+AGG | - | chr1.2:52434025-52434044 | None:intergenic | 30.0% | |
| AATGAGATTAGGGTATGTTA+GGG | + | chr1.2:52433584-52433603 | MS.gene038047:intron | 30.0% | |
| AATTGGGACTGATTATTGAT+TGG | - | chr1.2:52435261-52435280 | None:intergenic | 30.0% | |
| ACCTAGAATTTACATTGAAC+AGG | + | chr1.2:52434370-52434389 | MS.gene038047:intron | 30.0% | |
| ACCTGTTCAATGTAAATTCT+AGG | - | chr1.2:52434374-52434393 | None:intergenic | 30.0% | |
| ATGTATGGAATGAAATGGAA+TGG | - | chr1.2:52435069-52435088 | None:intergenic | 30.0% | |
| CCATTGTTATAAAATGGAGA+TGG | - | chr1.2:52432038-52432057 | None:intergenic | 30.0% | |
| CTATTAGAGTTAAGTGGAAA+TGG | - | chr1.2:52433539-52433558 | None:intergenic | 30.0% | |
| GCATTAAAATAGAAGATCCA+AGG | - | chr1.2:52435384-52435403 | None:intergenic | 30.0% | |
| GTTCCCATAAAATGATAGAT+AGG | - | chr1.2:52432697-52432716 | None:intergenic | 30.0% | |
| TAATAACTTGAATTCGTAGC+AGG | - | chr1.2:52433201-52433220 | None:intergenic | 30.0% | |
| TACAACATGAAAACCATGAA+TGG | + | chr1.2:52434797-52434816 | MS.gene038047:intron | 30.0% | |
| TACATATATTTGTGTAGCTG+CGG | + | chr1.2:52431846-52431865 | MS.gene038047:intron | 30.0% | |
| TCACTCCTAAGTTTAATGTA+TGG | - | chr1.2:52435084-52435103 | None:intergenic | 30.0% | |
| TGAACACTAGTAACAAATGA+TGG | - | chr1.2:52432920-52432939 | None:intergenic | 30.0% | |
| TGAGCTGACAGAAATTAAAA+GGG | + | chr1.2:52434072-52434091 | MS.gene038047:intron | 30.0% | |
| TTGTAATATATGAGTGACTG+AGG | - | chr1.2:52434782-52434801 | None:intergenic | 30.0% | |
| TTTCCAAGAATTCAAGAGTT+TGG | + | chr1.2:52435229-52435248 | MS.gene038047:intron | 30.0% | |
| TTTCTCATCATAACCATTCA+TGG | - | chr1.2:52434813-52434832 | None:intergenic | 30.0% | |
| ! | ATTGGGACTGATTATTGATT+GGG | - | chr1.2:52435260-52435279 | None:intergenic | 30.0% |
| ! | CCATCTCCATTTTATAACAA+TGG | + | chr1.2:52432035-52432054 | MS.gene038047:intron | 30.0% |
| ! | GAATGTAAGTTTTGCAAATC+AGG | + | chr1.2:52432580-52432599 | MS.gene038047:CDS | 30.0% |
| ! | TCATATTAGCTTAGTGTTGT+TGG | + | chr1.2:52434336-52434355 | MS.gene038047:intron | 30.0% |
| ! | TTTTGGTACATAAAGGATTG+TGG | + | chr1.2:52432483-52432502 | MS.gene038047:intron | 30.0% |
| !! | ATTGGTTTCTCATGTTCTTT+TGG | - | chr1.2:52434640-52434659 | None:intergenic | 30.0% |
| !! | CTTCTTGAGCTAATTTTGAT+TGG | + | chr1.2:52433339-52433358 | MS.gene038047:intron | 30.0% |
| !! | GTTAGTAAGTTGATATTAGG+TGG | - | chr1.2:52433951-52433970 | None:intergenic | 30.0% |
| !! | TTATTTTTCAGTCTGGTTAG+AGG | - | chr1.2:52435339-52435358 | None:intergenic | 30.0% |
| !! | TTTTTCGATATACCAGAAGA+AGG | - | chr1.2:52433611-52433630 | None:intergenic | 30.0% |
| !!! | CATTTTAAAACCATGCATCA+GGG | + | chr1.2:52433119-52433138 | MS.gene038047:intron | 30.0% |
| !!! | GATTATAGTTTTGAGTGCAT+TGG | + | chr1.2:52434697-52434716 | MS.gene038047:CDS | 30.0% |
| !!! | GGTATGTTTTTGGTACATAA+AGG | + | chr1.2:52432476-52432495 | MS.gene038047:intron | 30.0% |
| !!! | TTCGAAGTTATTTTTCAGTC+TGG | - | chr1.2:52435346-52435365 | None:intergenic | 30.0% |
| AAATAGTCCTCAATTGGTAG+AGG | - | chr1.2:52433900-52433919 | None:intergenic | 35.0% | |
| AAGTCTGACACCAACATATT+TGG | - | chr1.2:52433439-52433458 | None:intergenic | 35.0% | |
| AATAGTCCTCAATTGGTAGA+GGG | - | chr1.2:52433899-52433918 | None:intergenic | 35.0% | |
| AGACCAAACTCTTGAATTCT+TGG | - | chr1.2:52435235-52435254 | None:intergenic | 35.0% | |
| AGAGAATGATCTAGTGTGAA+AGG | - | chr1.2:52433842-52433861 | None:intergenic | 35.0% | |
| ATAGAAACTGGTACCAAACA+TGG | + | chr1.2:52435112-52435131 | MS.gene038047:intron | 35.0% | |
| ATGAATCATTGACACAGACA+TGG | - | chr1.2:52432440-52432459 | None:intergenic | 35.0% | |
| CATTGAATTGTGCCTATATG+TGG | - | chr1.2:52433251-52433270 | None:intergenic | 35.0% | |
| CCATATCAGATGTACTTTGA+TGG | - | chr1.2:52432952-52432971 | None:intergenic | 35.0% | |
| CCATCAAAGTACATCTGATA+TGG | + | chr1.2:52432949-52432968 | MS.gene038047:intron | 35.0% | |
| CTGAGCTGACAGAAATTAAA+AGG | + | chr1.2:52434071-52434090 | MS.gene038047:intron | 35.0% | |
| CTTCATGACCAAGTATACAT+GGG | - | chr1.2:52432128-52432147 | None:intergenic | 35.0% | |
| CTTCTGATTGAATGTGTATC+CGG | + | chr1.2:52432294-52432313 | MS.gene038047:intron | 35.0% | |
| GTCTTCAAATAGTCCTCAAT+TGG | - | chr1.2:52433906-52433925 | None:intergenic | 35.0% | |
| TACTCACAATTTGACTCTTG+CGG | + | chr1.2:52435470-52435489 | MS.gene038047:CDS | 35.0% | |
| TCTCATATTGCAGGAAATCA+AGG | + | chr1.2:52435434-52435453 | MS.gene038047:intron | 35.0% | |
| TGCAGTTTATATAAACAGGG+AGG | - | chr1.2:52435310-52435329 | None:intergenic | 35.0% | |
| TGCATCCATAATTGCATATG+TGG | + | chr1.2:52433092-52433111 | MS.gene038047:intron | 35.0% | |
| TGGAAATGTCTCTGTAATGA+GGG | + | chr1.2:52434717-52434736 | MS.gene038047:CDS | 35.0% | |
| TGTTGTCTACTAGACTGAAT+TGG | - | chr1.2:52434157-52434176 | None:intergenic | 35.0% | |
| TGTTGTTCATGATGTTAGTG+TGG | + | chr1.2:52432738-52432757 | MS.gene038047:CDS | 35.0% | |
| TGTTGTTGATGTGTTAGTGT+CGG | + | chr1.2:52432395-52432414 | MS.gene038047:intron | 35.0% | |
| TTGGAAATGTCTCTGTAATG+AGG | + | chr1.2:52434716-52434735 | MS.gene038047:CDS | 35.0% | |
| ! | TAAAGGATTGTGGAAAGTGT+TGG | + | chr1.2:52432493-52432512 | MS.gene038047:intron | 35.0% |
| !! | AACAGTGTACTGACTAAAAG+TGG | - | chr1.2:52432722-52432741 | None:intergenic | 35.0% |
| !! | AATATGTTGGTGTCAGACTT+CGG | + | chr1.2:52433439-52433458 | MS.gene038047:intron | 35.0% |
| !! | TCAATGATCAGTGGTTTGTT+GGG | - | chr1.2:52431883-52431902 | None:intergenic | 35.0% |
| !! | TTTGGTGTTGCAAATTTGCA+GGG | + | chr1.2:52434864-52434883 | MS.gene038047:intron | 35.0% |
| !!! | GCATTTTAAAACCATGCATC+AGG | + | chr1.2:52433118-52433137 | MS.gene038047:intron | 35.0% |
| !!! | TCATCTTGATTTGCTTTTGC+AGG | + | chr1.2:52432086-52432105 | MS.gene038047:intron | 35.0% |
| !!! | TTTTCGGCTTTGGTTCTATT+CGG | + | chr1.2:52434489-52434508 | MS.gene038047:intron | 35.0% |
| !!! | TTTTGGTGTTGCAAATTTGC+AGG | + | chr1.2:52434863-52434882 | MS.gene038047:intron | 35.0% |
| AAAGTTTGTCTCCTTGGATG+TGG | + | chr1.2:52432790-52432809 | MS.gene038047:CDS | 40.0% | |
| AAATTAGTCACCCTGATGCA+TGG | - | chr1.2:52433132-52433151 | None:intergenic | 40.0% | |
| AATAGAAGATCCAAGGTGTG+TGG | - | chr1.2:52435377-52435396 | None:intergenic | 40.0% | |
| ACATGAGAAACCAATTCAGC+AGG | + | chr1.2:52434645-52434664 | MS.gene038047:CDS | 40.0% | |
| ACGAACTTTGCCACAAAGAT+TGG | - | chr1.2:52432611-52432630 | None:intergenic | 40.0% | |
| ACTCGTGCAAGAATTACTCA+TGG | + | chr1.2:52433503-52433522 | MS.gene038047:intron | 40.0% | |
| ACTTTGTCCAAAGGAGCTAT+AGG | - | chr1.2:52432775-52432794 | None:intergenic | 40.0% | |
| AGAGAGCAGTGAAGAGAATT+TGG | - | chr1.2:52431948-52431967 | None:intergenic | 40.0% | |
| AGGAGACAAACTTTGTCCAA+AGG | - | chr1.2:52432784-52432803 | None:intergenic | 40.0% | |
| ATACATGGGAAAAGACCTTC+AGG | - | chr1.2:52432114-52432133 | None:intergenic | 40.0% | |
| ATAGAAGATCCAAGGTGTGT+GGG | - | chr1.2:52435376-52435395 | None:intergenic | 40.0% | |
| ATAGTCCTCAATTGGTAGAG+GGG | - | chr1.2:52433898-52433917 | None:intergenic | 40.0% | |
| ATAGTTGATCTCACAGATGG+TGG | + | chr1.2:52434670-52434689 | MS.gene038047:CDS | 40.0% | |
| ATATATTTGTGTAGCTGCGG+TGG | + | chr1.2:52431849-52431868 | MS.gene038047:intron | 40.0% | |
| CAACAAACCACTGATCATTG+AGG | + | chr1.2:52431882-52431901 | MS.gene038047:CDS | 40.0% | |
| CTTTGTCCAAAGGAGCTATA+GGG | - | chr1.2:52432774-52432793 | None:intergenic | 40.0% | |
| GAAAGAGAGAAAACCTTTGC+AGG | - | chr1.2:52431754-52431773 | None:intergenic | 40.0% | |
| GATCGATGTGGTTGAAATTG+CGG | + | chr1.2:52433031-52433050 | MS.gene038047:intron | 40.0% | |
| GCAGTCCACATATGCAATTA+TGG | - | chr1.2:52433100-52433119 | None:intergenic | 40.0% | |
| GCTTCATGACCAAGTATACA+TGG | - | chr1.2:52432129-52432148 | None:intergenic | 40.0% | |
| GGTCATGCAGTTTGTGAAAT+AGG | - | chr1.2:52435289-52435308 | None:intergenic | 40.0% | |
| GTATAGCACACACACATACA+TGG | + | chr1.2:52433371-52433390 | MS.gene038047:intron | 40.0% | |
| GTATGTGTGTGTGCTATACT+AGG | - | chr1.2:52433370-52433389 | None:intergenic | 40.0% | |
| GTCATAGTTGATCTCACAGA+TGG | + | chr1.2:52434667-52434686 | MS.gene038047:CDS | 40.0% | |
| GTGAGAAAATGTGATCGATG+TGG | + | chr1.2:52433019-52433038 | MS.gene038047:intron | 40.0% | |
| GTGAGCAATCTGATAGAAAC+TGG | + | chr1.2:52435100-52435119 | MS.gene038047:intron | 40.0% | |
| TACATTCTCCACATTCAGCT+TGG | - | chr1.2:52432567-52432586 | None:intergenic | 40.0% | |
| TACATTGAACAGGTTGCTGA+GGG | + | chr1.2:52434380-52434399 | MS.gene038047:intron | 40.0% | |
| TACTTTGCAGCGAAGAACTT+TGG | + | chr1.2:52434595-52434614 | MS.gene038047:intron | 40.0% | |
| TCAACTATGACCTGCTGAAT+TGG | - | chr1.2:52434658-52434677 | None:intergenic | 40.0% | |
| TCAGGCAAAACCAATCTTTG+TGG | + | chr1.2:52432598-52432617 | MS.gene038047:CDS | 40.0% | |
| TGAAAGGAGAGTTCTCCTTT+GGG | - | chr1.2:52433826-52433845 | None:intergenic | 40.0% | |
| TGTCAGATACTAGCATGTGT+TGG | - | chr1.2:52432323-52432342 | None:intergenic | 40.0% | |
| TGTTACTGAAGTTAAGCCAG+GGG | + | chr1.2:52432522-52432541 | MS.gene038047:CDS | 40.0% | |
| TTAAATTGTGGTTGCACTCG+TGG | + | chr1.2:52432974-52432993 | MS.gene038047:intron | 40.0% | |
| TTACATTGAACAGGTTGCTG+AGG | + | chr1.2:52434379-52434398 | MS.gene038047:intron | 40.0% | |
| TTGAGTAATGTTTCAGGCCT+TGG | + | chr1.2:52434204-52434223 | MS.gene038047:intron | 40.0% | |
| TTGGACAAAGTTTGTCTCCT+TGG | + | chr1.2:52432784-52432803 | MS.gene038047:CDS | 40.0% | |
| ! | ATCAACTCGACCTTTTCAGT+TGG | + | chr1.2:52434935-52434954 | MS.gene038047:CDS | 40.0% |
| ! | CACATTCAGCTTGGTAACAA+GGG | - | chr1.2:52432558-52432577 | None:intergenic | 40.0% |
| ! | CTCAATGATCAGTGGTTTGT+TGG | - | chr1.2:52431884-52431903 | None:intergenic | 40.0% |
| ! | GGTCTTTTCCCATGTATACT+TGG | + | chr1.2:52432117-52432136 | MS.gene038047:CDS | 40.0% |
| ! | GTGTTACTGAAGTTAAGCCA+GGG | + | chr1.2:52432521-52432540 | MS.gene038047:CDS | 40.0% |
| !! | AGGGTTGGCTAAGATACAAA+GGG | - | chr1.2:52433181-52433200 | None:intergenic | 40.0% |
| !! | AGTGTACTGACTAAAAGTGG+AGG | - | chr1.2:52432719-52432738 | None:intergenic | 40.0% |
| !! | ATTGTGGAAAGTGTTGGAGA+AGG | + | chr1.2:52432499-52432518 | MS.gene038047:CDS | 40.0% |
| !! | TGTTACTTGCTTTTCGGCTT+TGG | + | chr1.2:52434479-52434498 | MS.gene038047:intron | 40.0% |
| !! | TTGGTGTTGCAAATTTGCAG+GGG | + | chr1.2:52434865-52434884 | MS.gene038047:intron | 40.0% |
| !!! | ATTGTTGCTGTTTTCGGTCT+TGG | + | chr1.2:52434264-52434283 | MS.gene038047:CDS | 40.0% |
| !!! | GGGTCAATTGTTGCTGTTTT+CGG | + | chr1.2:52434258-52434277 | MS.gene038047:CDS | 40.0% |
| AATTGCGGTTGCAATGCTGT+TGG | + | chr1.2:52433046-52433065 | MS.gene038047:intron | 45.0% | |
| ACTGATGCTTACACTTGGAG+CGG | + | chr1.2:52431973-52431992 | MS.gene038047:CDS | 45.0% | |
| ACTTGAATTCGTAGCAGGGT+TGG | - | chr1.2:52433196-52433215 | None:intergenic | 45.0% | |
| AGACGATAACCTTGCACTCA+AGG | + | chr1.2:52433796-52433815 | MS.gene038047:intron | 45.0% | |
| ATACTTGGTCATGAAGCTGC+TGG | + | chr1.2:52432132-52432151 | MS.gene038047:CDS | 45.0% | |
| CATGCATTGCAAGCACACAA+CGG | - | chr1.2:52435539-52435558 | None:intergenic | 45.0% | |
| CATTGACAGAAAAGCGACTC+TGG | - | chr1.2:52432669-52432688 | None:intergenic | 45.0% | |
| CCGAGAAATTCGAGAGTCAT+CGG | + | chr1.2:52435199-52435218 | MS.gene038047:intron | 45.0% | |
| CCGATGACTCTCGAATTTCT+CGG | - | chr1.2:52435202-52435221 | None:intergenic | 45.0% | |
| CCTTGTTACCAAGCTGAATG+TGG | + | chr1.2:52432556-52432575 | MS.gene038047:CDS | 45.0% | |
| CGATGACTCTCGAATTTCTC+GGG | - | chr1.2:52435201-52435220 | None:intergenic | 45.0% | |
| GAAAGGAGAGTTCTCCTTTG+GGG | - | chr1.2:52433825-52433844 | None:intergenic | 45.0% | |
| GATCATTGAGGACGTTCAAG+TGG | + | chr1.2:52431894-52431913 | MS.gene038047:CDS | 45.0% | |
| GATTGACCCTATAGCTCCTT+TGG | + | chr1.2:52432765-52432784 | MS.gene038047:CDS | 45.0% | |
| GCAGGTGCATCAAGGATTAT+TGG | + | chr1.2:52434413-52434432 | MS.gene038047:CDS | 45.0% | |
| GTATGTTAGGGACCTTCTTC+TGG | + | chr1.2:52433596-52433615 | MS.gene038047:intron | 45.0% | |
| GTCACACTGATGCTTACACT+TGG | + | chr1.2:52431968-52431987 | MS.gene038047:CDS | 45.0% | |
| GTGAAAGGAGAGTTCTCCTT+TGG | - | chr1.2:52433827-52433846 | None:intergenic | 45.0% | |
| TACTAGCATGTGTTGGACAC+CGG | - | chr1.2:52432316-52432335 | None:intergenic | 45.0% | |
| TACTTGGTCATGAAGCTGCT+GGG | + | chr1.2:52432133-52432152 | MS.gene038047:CDS | 45.0% | |
| TAGCAGCAACAGTCACCTTA+TGG | - | chr1.2:52434759-52434778 | None:intergenic | 45.0% | |
| TCTTTCCCCTCTACCAATTG+AGG | + | chr1.2:52433890-52433909 | MS.gene038047:intron | 45.0% | |
| TGAACGTCCTCAATGATCAG+TGG | - | chr1.2:52431892-52431911 | None:intergenic | 45.0% | |
| TGGGGGACATCAGTTATTGT+AGG | + | chr1.2:52434888-52434907 | MS.gene038047:CDS | 45.0% | |
| TGTTGCAAATTTGCAGGGGT+GGG | + | chr1.2:52434869-52434888 | MS.gene038047:intron | 45.0% | |
| ! | ATTGTAGGTGTTGCAGCATC+AGG | + | chr1.2:52434903-52434922 | MS.gene038047:CDS | 45.0% |
| ! | CCACATTCAGCTTGGTAACA+AGG | - | chr1.2:52432559-52432578 | None:intergenic | 45.0% |
| ! | GGTTGGCTAAGATACAAAGG+GGG | - | chr1.2:52433179-52433198 | None:intergenic | 45.0% |
| ! | GTCTGGAAAGGAACAGCTTT+TGG | + | chr1.2:52434969-52434988 | MS.gene038047:CDS | 45.0% |
| ! | GTTTTCGGTCTTGGAACTGT+CGG | + | chr1.2:52434273-52434292 | MS.gene038047:CDS | 45.0% |
| ! | TGGAAAGGAACAGCTTTTGG+TGG | + | chr1.2:52434972-52434991 | MS.gene038047:CDS | 45.0% |
| ! | TTGTAGGTGTTGCAGCATCA+GGG | + | chr1.2:52434904-52434923 | MS.gene038047:CDS | 45.0% |
| ! | TTTTCGGTCTTGGAACTGTC+GGG | + | chr1.2:52434274-52434293 | MS.gene038047:CDS | 45.0% |
| !! | CAGGGTTGGCTAAGATACAA+AGG | - | chr1.2:52433182-52433201 | None:intergenic | 45.0% |
| !! | GGGTTGGCTAAGATACAAAG+GGG | - | chr1.2:52433180-52433199 | None:intergenic | 45.0% |
| !! | GGTGTTACTGAAGTTAAGCC+AGG | + | chr1.2:52432520-52432539 | MS.gene038047:CDS | 45.0% |
| !! | GTGTCGGTCGGTATTTTGTT+TGG | + | chr1.2:52432411-52432430 | MS.gene038047:intron | 45.0% |
| !! | GTTGATGTGTTAGTGTCGGT+CGG | + | chr1.2:52432399-52432418 | MS.gene038047:intron | 45.0% |
| !! | TGCTTTGGAATGCTGCCATA+AGG | + | chr1.2:52434741-52434760 | MS.gene038047:CDS | 45.0% |
| !! | TTGCTTTTGCAGGATCCTGA+AGG | + | chr1.2:52432096-52432115 | MS.gene038047:intron | 45.0% |
| !!! | CAGAGTCGCTTTTCTGTCAA+TGG | + | chr1.2:52432667-52432686 | MS.gene038047:CDS | 45.0% |
| !!! | CGACCTTTTCAGTTGGTAAC+CGG | + | chr1.2:52434942-52434961 | MS.gene038047:CDS | 45.0% |
| !! | TAAATAAATATAAGAAATTA+AGG | - | chr1.2:52434577-52434596 | None:intergenic | 5.0% |
| !!! | TTTTTAATGATTATATTATT+AGG | + | chr1.2:52432829-52432848 | MS.gene038047:intron | 5.0% |
| AACACTGCAAAGGTGGAAGC+AGG | + | chr1.2:52434237-52434256 | MS.gene038047:CDS | 50.0% | |
| AAGATCCAAGGTGTGTGGGT+CGG | - | chr1.2:52435372-52435391 | None:intergenic | 50.0% | |
| AATTACCGACCCACACACCT+TGG | + | chr1.2:52435364-52435383 | MS.gene038047:intron | 50.0% | |
| ACACTGCAAAGGTGGAAGCA+GGG | + | chr1.2:52434238-52434257 | MS.gene038047:CDS | 50.0% | |
| CAAAAGCTGCAGGTGCATCA+AGG | + | chr1.2:52434405-52434424 | MS.gene038047:CDS | 50.0% | |
| CAGTTGGAACACCACATCCA+AGG | - | chr1.2:52432804-52432823 | None:intergenic | 50.0% | |
| CGTCCGGTTACCAACTGAAA+AGG | - | chr1.2:52434948-52434967 | None:intergenic | 50.0% | |
| CTCTGTAATGAGGGCTGCTT+TGG | + | chr1.2:52434726-52434745 | MS.gene038047:CDS | 50.0% | |
| CTTGGATGTGGTGTTCCAAC+TGG | + | chr1.2:52432802-52432821 | MS.gene038047:CDS | 50.0% | |
| GCATTTGACCTCATGCACGA+AGG | + | chr1.2:52435504-52435523 | MS.gene038047:CDS | 50.0% | |
| GGACAAGTCATCACCTGCAA+AGG | + | chr1.2:52431738-52431757 | MS.gene038047:CDS | 50.0% | |
| GGCAAAGTTCGTTCTGCTAC+TGG | + | chr1.2:52432619-52432638 | MS.gene038047:CDS | 50.0% | |
| GTGTTGCAAATTTGCAGGGG+TGG | + | chr1.2:52434868-52434887 | MS.gene038047:intron | 50.0% | |
| GTTCGTTCTGCTACTGGAGT+CGG | + | chr1.2:52432625-52432644 | MS.gene038047:CDS | 50.0% | |
| GTTGCAAATTTGCAGGGGTG+GGG | + | chr1.2:52434870-52434889 | MS.gene038047:intron | 50.0% | |
| TTGCAAATTTGCAGGGGTGG+GGG | + | chr1.2:52434871-52434890 | MS.gene038047:intron | 50.0% | |
| TTTGACCTCATGCACGAAGG+AGG | + | chr1.2:52435507-52435526 | MS.gene038047:CDS | 50.0% | |
| ! | AGCTGTCTGGAACACTGCAA+AGG | + | chr1.2:52434227-52434246 | MS.gene038047:CDS | 50.0% |
| ! | CAAGCCAAGGCACTTGTGAT+CGG | - | chr1.2:52435007-52435026 | None:intergenic | 50.0% |
| ! | TGTCTGGAACACTGCAAAGG+TGG | + | chr1.2:52434230-52434249 | MS.gene038047:CDS | 50.0% |
| AGAGCCGATCACAAGTGCCT+TGG | + | chr1.2:52435000-52435019 | MS.gene038047:CDS | 55.0% | |
| ATTCGAACCTCACCAGCCTG+AGG | - | chr1.2:52431925-52431944 | None:intergenic | 55.0% | |
| CAAGGGATGACATGATCCCC+TGG | - | chr1.2:52432541-52432560 | None:intergenic | 55.0% | |
| CAGTGTTCCAGACAGCTCCA+AGG | - | chr1.2:52434224-52434243 | None:intergenic | 55.0% | |
| GCATTGCAAGCACACAACGG+AGG | - | chr1.2:52435536-52435555 | None:intergenic | 55.0% | |
| TGCACTCAAGGCTACCCCAA+AGG | + | chr1.2:52433808-52433827 | MS.gene038047:intron | 55.0% | |
| TGCTTACACTTGGAGCGGCA+AGG | + | chr1.2:52431978-52431997 | MS.gene038047:CDS | 55.0% | |
| TGGTCATGAAGCTGCTGGGT+GGG | + | chr1.2:52432137-52432156 | MS.gene038047:intron | 55.0% | |
| TGTTCCTTTCCAGACGCGTC+CGG | - | chr1.2:52434964-52434983 | None:intergenic | 55.0% | |
| TTGGTCATGAAGCTGCTGGG+TGG | + | chr1.2:52432136-52432155 | MS.gene038047:intron | 55.0% | |
| TTTCAGGCCTTGGAGCTGTC+TGG | + | chr1.2:52434214-52434233 | MS.gene038047:intron | 55.0% | |
| ! | TTGGGGTAGCCTTGAGTGCA+AGG | - | chr1.2:52433808-52433827 | None:intergenic | 55.0% |
| !! | CAGTGGTTTGTTGGGTTCCC+AGG | - | chr1.2:52431875-52431894 | None:intergenic | 55.0% |
| GGCATCCTCCTTCGTGCATG+AGG | - | chr1.2:52435515-52435534 | None:intergenic | 60.0% | |
| GTAACCGGACGCGTCTGGAA+AGG | + | chr1.2:52434957-52434976 | MS.gene038047:CDS | 60.0% | |
| TGTGGTTGCACTCGTGGCAG+TGG | + | chr1.2:52432980-52432999 | MS.gene038047:intron | 60.0% | |
| TTGTGTAGCTGCGGTGGCCT+GGG | + | chr1.2:52431855-52431874 | MS.gene038047:intron | 60.0% | |
| TTTGTGTAGCTGCGGTGGCC+TGG | + | chr1.2:52431854-52431873 | MS.gene038047:intron | 60.0% | |
| ! | GCTGAGGGTGCAAAAGCTGC+AGG | + | chr1.2:52434395-52434414 | MS.gene038047:CDS | 60.0% |
| !! | AGTTGGTAACCGGACGCGTC+TGG | + | chr1.2:52434952-52434971 | MS.gene038047:CDS | 60.0% |
| CGAACCTCACCAGCCTGAGG+CGG | - | chr1.2:52431922-52431941 | None:intergenic | 65.0% | |
| CGTTCAAGTGGCTCCGCCTC+AGG | + | chr1.2:52431906-52431925 | MS.gene038047:CDS | 65.0% | |
| CAAGTGGCTCCGCCTCAGGC+TGG | + | chr1.2:52431910-52431929 | MS.gene038047:CDS | 70.0% | |
| GGCTCCGCCTCAGGCTGGTG+AGG | + | chr1.2:52431915-52431934 | MS.gene038047:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 52431726 | 52435563 | 52431726 | ID=MS.gene038047 |
| chr1.2 | mRNA | 52431726 | 52435563 | 52431726 | ID=MS.gene038047.t1;Parent=MS.gene038047 |
| chr1.2 | exon | 52431726 | 52431759 | 52431726 | ID=MS.gene038047.t1.exon1;Parent=MS.gene038047.t1 |
| chr1.2 | CDS | 52431726 | 52431759 | 52431726 | ID=cds.MS.gene038047.t1;Parent=MS.gene038047.t1 |
| chr1.2 | exon | 52431863 | 52431999 | 52431863 | ID=MS.gene038047.t1.exon2;Parent=MS.gene038047.t1 |
| chr1.2 | CDS | 52431863 | 52431999 | 52431863 | ID=cds.MS.gene038047.t1;Parent=MS.gene038047.t1 |
| chr1.2 | exon | 52432108 | 52432154 | 52432108 | ID=MS.gene038047.t1.exon3;Parent=MS.gene038047.t1 |
| chr1.2 | CDS | 52432108 | 52432154 | 52432108 | ID=cds.MS.gene038047.t1;Parent=MS.gene038047.t1 |
| chr1.2 | exon | 52432498 | 52432823 | 52432498 | ID=MS.gene038047.t1.exon4;Parent=MS.gene038047.t1 |
| chr1.2 | CDS | 52432498 | 52432823 | 52432498 | ID=cds.MS.gene038047.t1;Parent=MS.gene038047.t1 |
| chr1.2 | exon | 52434220 | 52434302 | 52434220 | ID=MS.gene038047.t1.exon5;Parent=MS.gene038047.t1 |
| chr1.2 | CDS | 52434220 | 52434302 | 52434220 | ID=cds.MS.gene038047.t1;Parent=MS.gene038047.t1 |
| chr1.2 | exon | 52434392 | 52434467 | 52434392 | ID=MS.gene038047.t1.exon6;Parent=MS.gene038047.t1 |
| chr1.2 | CDS | 52434392 | 52434467 | 52434392 | ID=cds.MS.gene038047.t1;Parent=MS.gene038047.t1 |
| chr1.2 | exon | 52434605 | 52434762 | 52434605 | ID=MS.gene038047.t1.exon7;Parent=MS.gene038047.t1 |
| chr1.2 | CDS | 52434605 | 52434762 | 52434605 | ID=cds.MS.gene038047.t1;Parent=MS.gene038047.t1 |
| chr1.2 | exon | 52434885 | 52435046 | 52434885 | ID=MS.gene038047.t1.exon8;Parent=MS.gene038047.t1 |
| chr1.2 | CDS | 52434885 | 52435046 | 52434885 | ID=cds.MS.gene038047.t1;Parent=MS.gene038047.t1 |
| chr1.2 | exon | 52435447 | 52435563 | 52435447 | ID=MS.gene038047.t1.exon9;Parent=MS.gene038047.t1 |
| chr1.2 | CDS | 52435447 | 52435563 | 52435447 | ID=cds.MS.gene038047.t1;Parent=MS.gene038047.t1 |
| Gene Sequence |
| Protein sequence |
