Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039102.t1 | XP_003596186.1 | 99.4 | 822 | 5 | 0 | 1 | 822 | 22 | 843 | 0.00E+00 | 1649.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039102.t1 | Q9ASR1 | 93.1 | 822 | 57 | 0 | 1 | 822 | 22 | 843 | 0.0e+00 | 1563.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039102.t1 | G7IH33 | 99.4 | 822 | 5 | 0 | 1 | 822 | 22 | 843 | 0.0e+00 | 1649.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene055714 | MS.gene039102 | PPI |
MS.gene015588 | MS.gene039102 | PPI |
MS.gene58774 | MS.gene039102 | PPI |
MS.gene039102 | MS.gene040156 | PPI |
MS.gene039102 | MS.gene81858 | PPI |
MS.gene039102 | MS.gene39618 | PPI |
MS.gene068078 | MS.gene039102 | PPI |
MS.gene039102 | MS.gene068080 | PPI |
MS.gene041404 | MS.gene039102 | PPI |
MS.gene039102 | MS.gene41888 | PPI |
MS.gene039102 | MS.gene26537 | PPI |
MS.gene063366 | MS.gene039102 | PPI |
MS.gene039102 | MS.gene060216 | PPI |
MS.gene59979 | MS.gene039102 | PPI |
MS.gene066163 | MS.gene039102 | PPI |
MS.gene039102 | MS.gene41890 | PPI |
MS.gene040581 | MS.gene039102 | PPI |
MS.gene039102 | MS.gene058595 | PPI |
MS.gene039102 | MS.gene039110 | PPI |
MS.gene039102 | MS.gene008760 | PPI |
MS.gene036653 | MS.gene039102 | PPI |
MS.gene039102 | MS.gene63721 | PPI |
MS.gene039102 | MS.gene62623 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039102.t1 | MTR_2g069310 | 99.392 | 822 | 5 | 0 | 1 | 822 | 22 | 843 | 0.0 | 1705 |
MS.gene039102.t1 | MTR_2g069050 | 99.270 | 822 | 6 | 0 | 1 | 822 | 22 | 843 | 0.0 | 1704 |
MS.gene039102.t1 | MTR_1g048000 | 97.689 | 822 | 19 | 0 | 1 | 822 | 22 | 843 | 0.0 | 1687 |
MS.gene039102.t1 | MTR_2g069320 | 86.496 | 822 | 111 | 0 | 1 | 822 | 22 | 843 | 0.0 | 1498 |
MS.gene039102.t1 | MTR_4g116430 | 39.234 | 836 | 471 | 10 | 1 | 813 | 142 | 963 | 0.0 | 622 |
MS.gene039102.t1 | MTR_4g119340 | 29.604 | 1010 | 489 | 26 | 1 | 808 | 17 | 1006 | 2.18e-132 | 420 |
MS.gene039102.t1 | MTR_7g009740 | 40.426 | 141 | 82 | 2 | 1 | 141 | 70 | 208 | 5.00e-22 | 102 |
MS.gene039102.t1 | MTR_4g101750 | 25.577 | 477 | 261 | 16 | 311 | 772 | 353 | 750 | 1.27e-20 | 97.8 |
MS.gene039102.t1 | MTR_4g101750 | 37.762 | 143 | 71 | 2 | 1 | 141 | 95 | 221 | 3.29e-14 | 77.4 |
MS.gene039102.t1 | MTR_3g101820 | 93.617 | 47 | 3 | 0 | 451 | 497 | 19 | 65 | 1.84e-20 | 87.0 |
MS.gene039102.t1 | MTR_3g097250 | 40.714 | 140 | 70 | 3 | 1 | 140 | 86 | 212 | 2.17e-19 | 93.6 |
MS.gene039102.t1 | MTR_1g052535 | 39.716 | 141 | 69 | 2 | 1 | 141 | 85 | 209 | 2.20e-19 | 92.8 |
MS.gene039102.t1 | MTR_1g052535 | 39.716 | 141 | 69 | 2 | 1 | 141 | 85 | 209 | 4.98e-19 | 92.4 |
MS.gene039102.t1 | MTR_4g079360 | 40.845 | 142 | 62 | 4 | 1 | 141 | 60 | 180 | 8.38e-19 | 91.7 |
MS.gene039102.t1 | MTR_4g101750 | 25.056 | 447 | 242 | 15 | 311 | 742 | 353 | 721 | 1.67e-16 | 84.7 |
MS.gene039102.t1 | MTR_4g101750 | 37.762 | 143 | 71 | 2 | 1 | 141 | 95 | 221 | 3.04e-14 | 77.4 |
MS.gene039102.t1 | MTR_7g044770 | 38.095 | 147 | 68 | 4 | 1 | 141 | 65 | 194 | 3.26e-15 | 80.5 |
MS.gene039102.t1 | MTR_2g020660 | 35.135 | 148 | 71 | 4 | 1 | 141 | 58 | 187 | 1.31e-12 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039102.t1 | AT1G56070 | 93.066 | 822 | 57 | 0 | 1 | 822 | 22 | 843 | 0.0 | 1615 |
MS.gene039102.t1 | AT1G56070 | 93.066 | 822 | 57 | 0 | 1 | 822 | 22 | 843 | 0.0 | 1615 |
MS.gene039102.t1 | AT1G56070 | 93.066 | 822 | 57 | 0 | 1 | 822 | 22 | 843 | 0.0 | 1615 |
MS.gene039102.t1 | AT3G12915 | 84.550 | 822 | 72 | 4 | 1 | 822 | 22 | 788 | 0.0 | 1426 |
MS.gene039102.t1 | AT1G06220 | 37.870 | 845 | 488 | 11 | 1 | 822 | 141 | 971 | 0.0 | 602 |
MS.gene039102.t1 | AT1G06220 | 37.870 | 845 | 488 | 11 | 1 | 822 | 141 | 971 | 0.0 | 602 |
MS.gene039102.t1 | AT1G06220 | 37.870 | 845 | 488 | 11 | 1 | 822 | 141 | 971 | 0.0 | 602 |
MS.gene039102.t1 | AT5G25230 | 37.441 | 844 | 493 | 9 | 1 | 822 | 127 | 957 | 0.0 | 593 |
MS.gene039102.t1 | AT5G25230 | 37.441 | 844 | 493 | 9 | 1 | 822 | 127 | 957 | 0.0 | 593 |
MS.gene039102.t1 | AT3G22980 | 30.685 | 1007 | 476 | 27 | 1 | 808 | 12 | 995 | 1.78e-139 | 439 |
MS.gene039102.t1 | AT3G22980 | 30.685 | 1007 | 476 | 27 | 1 | 808 | 12 | 995 | 1.78e-139 | 439 |
MS.gene039102.t1 | AT3G22980 | 30.685 | 1007 | 476 | 27 | 1 | 808 | 12 | 995 | 1.78e-139 | 439 |
MS.gene039102.t1 | AT1G62750 | 26.022 | 465 | 274 | 15 | 311 | 772 | 357 | 754 | 6.99e-22 | 102 |
MS.gene039102.t1 | AT1G62750 | 37.500 | 144 | 72 | 2 | 1 | 142 | 99 | 226 | 1.77e-14 | 78.2 |
MS.gene039102.t1 | AT5G39900 | 40.426 | 141 | 76 | 2 | 1 | 141 | 69 | 201 | 3.10e-21 | 99.8 |
MS.gene039102.t1 | AT5G13650 | 39.716 | 141 | 69 | 1 | 1 | 141 | 85 | 209 | 2.91e-20 | 96.7 |
MS.gene039102.t1 | AT5G13650 | 39.716 | 141 | 69 | 1 | 1 | 141 | 86 | 210 | 3.26e-20 | 96.3 |
MS.gene039102.t1 | AT2G31060 | 39.437 | 142 | 64 | 3 | 1 | 141 | 62 | 182 | 3.83e-19 | 92.8 |
MS.gene039102.t1 | AT5G08650 | 38.571 | 140 | 73 | 2 | 1 | 140 | 89 | 215 | 2.56e-18 | 90.1 |
MS.gene039102.t1 | AT5G08650 | 39.286 | 140 | 72 | 2 | 1 | 140 | 89 | 215 | 3.47e-18 | 89.7 |
MS.gene039102.t1 | AT2G45030 | 23.077 | 481 | 266 | 18 | 311 | 772 | 328 | 723 | 4.30e-18 | 89.7 |
MS.gene039102.t1 | AT2G45030 | 36.735 | 147 | 70 | 4 | 1 | 141 | 68 | 197 | 1.10e-14 | 79.0 |
MS.gene039102.t1 | AT1G45332 | 23.077 | 481 | 266 | 18 | 311 | 772 | 148 | 543 | 5.36e-18 | 89.0 |
MS.gene039102.t1 | AT1G45332 | 23.077 | 481 | 266 | 18 | 311 | 772 | 328 | 723 | 5.47e-18 | 89.4 |
MS.gene039102.t1 | AT1G45332 | 36.735 | 147 | 70 | 4 | 1 | 141 | 68 | 197 | 1.07e-14 | 79.0 |
MS.gene039102.t1 | AT2G31060 | 39.437 | 142 | 68 | 3 | 1 | 141 | 62 | 186 | 1.81e-17 | 87.4 |
Find 236 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGTTTGAAGGTCAGAATTA+TGG | 0.222732 | 2.2:-23169643 | MS.gene039102:CDS |
TTCTCCCCAGGGACAAAATT+TGG | 0.227493 | 2.2:+23169618 | None:intergenic |
CTCTGCTGGTTTGCATGGTT+GGG | 0.249595 | 2.2:-23170225 | MS.gene039102:CDS |
GTGTTCAGAGAACTGTTATT+TGG | 0.270470 | 2.2:-23169575 | MS.gene039102:CDS |
CTTCCTGTCATTGAGTCCTT+TGG | 0.273842 | 2.2:-23168541 | MS.gene039102:CDS |
GTTTGTCAATGTAGCATTCT+TGG | 0.283303 | 2.2:+23169473 | None:intergenic |
GCCAAGAAAATCTGGTGTTT+TGG | 0.299094 | 2.2:-23168967 | MS.gene039102:CDS |
CAAAGATGATGGAGAGGCTT+TGG | 0.317773 | 2.2:-23170145 | MS.gene039102:CDS |
TCTCTGCTGGTTTGCATGGT+TGG | 0.318008 | 2.2:-23170226 | MS.gene039102:CDS |
CTGATGTTGCGGCCCTCAAC+TGG | 0.321497 | 2.2:+23168509 | None:intergenic |
ATGATTCCCGCTTCTGATAA+AGG | 0.326143 | 2.2:-23169711 | MS.gene039102:CDS |
AAGATGTATGCCTCTAAATT+TGG | 0.328168 | 2.2:-23170179 | MS.gene039102:CDS |
CAAGATCTTAGAACGATTCT+TGG | 0.331449 | 2.2:+23169020 | None:intergenic |
CCTTGATTTCATTCAAGTAT+TGG | 0.334928 | 2.2:+23168896 | None:intergenic |
TCAAGAAGTGCAGTGCTTGC+TGG | 0.343152 | 2.2:+23169879 | None:intergenic |
CAGTTGAGGGCCGCAACATC+AGG | 0.346803 | 2.2:-23168508 | MS.gene039102:CDS |
AAAGATGATGGAGAGGCTTT+GGG | 0.347711 | 2.2:-23170144 | MS.gene039102:CDS |
GTGTTAATGACCTGCTTGAT+AGG | 0.360875 | 2.2:+23170026 | None:intergenic |
CACAGTCGCTATGGTTGGTT+TGG | 0.369065 | 2.2:-23169508 | MS.gene039102:CDS |
GGTTTGAAGGTCAGAATTAT+GGG | 0.370077 | 2.2:-23169642 | MS.gene039102:CDS |
CTCAGTGTGTGTTTGATCAC+TGG | 0.371487 | 2.2:-23168474 | MS.gene039102:CDS |
CAGATGCTTCCTTGAGCTCC+AGG | 0.374710 | 2.2:-23170375 | MS.gene039102:CDS |
GTCTCTCTGAAGGACACAAC+TGG | 0.375560 | 2.2:+23169180 | None:intergenic |
GATTCCCTTGTTGCTGCCGC+TGG | 0.379217 | 2.2:-23170749 | MS.gene039102:CDS |
GAAAACTTCATAGCACGAAT+AGG | 0.381843 | 2.2:+23169429 | None:intergenic |
ATCAGAGGAAAAGGACTTGA+TGG | 0.385826 | 2.2:-23169940 | MS.gene039102:CDS |
TACAATCTGTTGTGCTTGTT+GGG | 0.386039 | 2.2:+23169117 | None:intergenic |
GTAAACAGGTTCAAGAAGTC+TGG | 0.388286 | 2.2:+23168690 | None:intergenic |
TCATCTTGAGATTTGTTTGA+AGG | 0.388649 | 2.2:-23169250 | MS.gene039102:CDS |
CTTGGTGGTCCATTTCTTAG+TGG | 0.388699 | 2.2:+23170100 | None:intergenic |
GGCATACATCTTTGCAAAGT+TGG | 0.389166 | 2.2:+23170190 | None:intergenic |
GGAACAGTTGCTTTCTCTGC+TGG | 0.392902 | 2.2:-23170239 | MS.gene039102:CDS |
CTCGTCAACACCAAATTTAG+AGG | 0.393467 | 2.2:+23170169 | None:intergenic |
TTCCTTGAGCTCCAGGTTGA+TGG | 0.393631 | 2.2:-23170368 | MS.gene039102:CDS |
ATCAAGGATTCCGTGGTTGC+TGG | 0.395800 | 2.2:-23168880 | MS.gene039102:CDS |
TGGATTTCCACCATGTAAAC+AGG | 0.397116 | 2.2:+23168676 | None:intergenic |
GATTTGTTTGAAGGATTTGC+AGG | 0.397271 | 2.2:-23169241 | MS.gene039102:CDS |
AGGATCTTGCCAAGAAAATC+TGG | 0.397634 | 2.2:-23168975 | MS.gene039102:CDS |
GTACAATCTGTTGTGCTTGT+TGG | 0.399465 | 2.2:+23169116 | None:intergenic |
AAGATCTTGTCCGAACAGTA+TGG | 0.399948 | 2.2:-23169006 | MS.gene039102:CDS |
GTGGTCCATTTCTTAGTGGC+AGG | 0.403123 | 2.2:+23170104 | None:intergenic |
GTTTGTACCATTGAGGAGTC+TGG | 0.404218 | 2.2:-23169303 | MS.gene039102:CDS |
AAGATCTTAGAACGATTCTT+GGG | 0.404757 | 2.2:+23169021 | None:intergenic |
TAAAGTTTCAACTGGTTTGA+AGG | 0.404880 | 2.2:-23169655 | MS.gene039102:CDS |
ATGTTGGGCCCGGTGGTCTC+AGG | 0.405338 | 2.2:+23168943 | None:intergenic |
GCCCTTCCTCTTGCGAATAT+CGG | 0.410239 | 2.2:+23168396 | None:intergenic |
AGTAGCAGAACCAGTATTCT+TGG | 0.411397 | 2.2:+23170082 | None:intergenic |
TAAAGCATAAGAGGTCCTTC+AGG | 0.412712 | 2.2:+23169744 | None:intergenic |
AAAGCAACTGTTCCTTTCTC+AGG | 0.414055 | 2.2:+23170248 | None:intergenic |
CGATACCTCTGAGCTGTAGA+TGG | 0.417008 | 2.2:+23169831 | None:intergenic |
CAAGAGCTTGCTCAGGAGCT+TGG | 0.418120 | 2.2:+23168656 | None:intergenic |
GATCTTCCTAAGCTTGTTGA+AGG | 0.426334 | 2.2:-23169360 | MS.gene039102:CDS |
TCGATCCTGCCACTAAGAAA+TGG | 0.426622 | 2.2:-23170109 | MS.gene039102:CDS |
AAATGGACCACCAAGAATAC+TGG | 0.427003 | 2.2:-23170092 | MS.gene039102:CDS |
CGATTCTTGGGGTCATCCCT+TGG | 0.431176 | 2.2:+23169033 | None:intergenic |
CACATATCAACCACCATGTT+GGG | 0.432084 | 2.2:+23168928 | None:intergenic |
ACTGTGCTCCGACAGGCTCT+TGG | 0.432422 | 2.2:-23170437 | MS.gene039102:CDS |
GGATTTGCAGGATGATTTCA+TGG | 0.433382 | 2.2:-23169229 | MS.gene039102:CDS |
ATTAATCTTATTGATTCCCC+TGG | 0.433729 | 2.2:-23170560 | MS.gene039102:CDS |
CAAGAAGTGCAGTGCTTGCT+GGG | 0.435961 | 2.2:+23169880 | None:intergenic |
TGGATTCTCCAGCCAGTTGA+GGG | 0.437780 | 2.2:-23168521 | MS.gene039102:CDS |
GCCATTGATGAGGGCACAAT+AGG | 0.438567 | 2.2:-23169057 | MS.gene039102:CDS |
TCGTGTTGAGAATTTGTATG+AGG | 0.438674 | 2.2:-23169811 | MS.gene039102:CDS |
GCTTTCTCTGCTGGTTTGCA+TGG | 0.439579 | 2.2:-23170230 | MS.gene039102:CDS |
CACCATGAAATCAGAGGAAA+AGG | 0.446522 | 2.2:-23169949 | MS.gene039102:CDS |
ATCACATACTTCAAAGCAAA+TGG | 0.448606 | 2.2:+23168807 | None:intergenic |
AAAACTTCATAGCACGAATA+GGG | 0.449551 | 2.2:+23169430 | None:intergenic |
ATTATAGCGCAAGAGGTTGC+TGG | 0.455122 | 2.2:-23170725 | MS.gene039102:CDS |
ACTTCTTGAACCTGTTTACA+TGG | 0.457137 | 2.2:-23168686 | MS.gene039102:CDS |
TTGAGACCTTCAACAAGCTT+AGG | 0.465806 | 2.2:+23169354 | None:intergenic |
ACCTATTGTGCCCTCATCAA+TGG | 0.467638 | 2.2:+23169056 | None:intergenic |
GTTATTGCTCATGTTGATCA+TGG | 0.469786 | 2.2:-23171574 | MS.gene039102:intron |
CCAATACTTGAATGAAATCA+AGG | 0.470676 | 2.2:-23168896 | MS.gene039102:CDS |
GATGAGAAATCGACGTGCCC+AGG | 0.471364 | 2.2:+23170542 | None:intergenic |
TCGCAAGAGGAAGGGCTTGA+AGG | 0.471559 | 2.2:-23168389 | MS.gene039102:CDS |
CAGAGAACTGTTATTTGGAT+GGG | 0.472670 | 2.2:-23169570 | MS.gene039102:CDS |
TACAAATCTTTCTTCTCCCC+AGG | 0.474730 | 2.2:+23169606 | None:intergenic |
AACCTTCCTTTATCAGAAGC+GGG | 0.475056 | 2.2:+23169705 | None:intergenic |
AGGTTCAAGAAGTCTGGGTT+TGG | 0.477724 | 2.2:+23168696 | None:intergenic |
CAAGCTCCTGAGCAAGCTCT+TGG | 0.480687 | 2.2:-23168655 | MS.gene039102:CDS |
TGTTGCGGCCCTCAACTGGC+TGG | 0.484331 | 2.2:+23168513 | None:intergenic |
CTCCATCAACCTGGAGCTCA+AGG | 0.484716 | 2.2:+23170366 | None:intergenic |
TTTGACACATAAAGCATAAG+AGG | 0.486817 | 2.2:+23169735 | None:intergenic |
AGGCTCTTGGAGAAAGGATC+AGG | 0.488174 | 2.2:-23170424 | MS.gene039102:CDS |
TTGGATTCTCCAGCCAGTTG+AGG | 0.488915 | 2.2:-23168522 | MS.gene039102:CDS |
ATCTTGTTAACTGTCAGAAC+CGG | 0.491014 | 2.2:+23170401 | None:intergenic |
TCAGAGAACTGTTATTTGGA+TGG | 0.493880 | 2.2:-23169571 | MS.gene039102:CDS |
TCTGGAGAACACATTGTTGC+TGG | 0.495917 | 2.2:-23169285 | MS.gene039102:CDS |
TATGATGTCATCAGATCCAT+TGG | 0.496991 | 2.2:-23168449 | MS.gene039102:CDS |
TGGCCGATGTTGACAAAGCT+AGG | 0.497965 | 2.2:-23169975 | MS.gene039102:CDS |
TCTTGCTAAGTCAGATCCTA+TGG | 0.502729 | 2.2:-23169328 | MS.gene039102:CDS |
CATGGTGGTTGATATGTGTA+AGG | 0.508997 | 2.2:-23168923 | MS.gene039102:CDS |
ATCAACCACCATGTTGGGCC+CGG | 0.509336 | 2.2:+23168933 | None:intergenic |
TATGGTTGTTTGTACCATTG+AGG | 0.510700 | 2.2:-23169310 | MS.gene039102:CDS |
TGAACAGCAACACGCACAAC+AGG | 0.510917 | 2.2:+23169399 | None:intergenic |
GAAGCTAGACCGTTGGAGGA+TGG | 0.513136 | 2.2:-23169090 | MS.gene039102:CDS |
TGCATGACACGTTTCATCAA+AGG | 0.514712 | 2.2:+23169912 | None:intergenic |
CGGTAGCATATTGATCATCA+AGG | 0.515015 | 2.2:+23169784 | None:intergenic |
TCCGACAGGCTCTTGGAGAA+AGG | 0.517683 | 2.2:-23170430 | MS.gene039102:CDS |
GACTGAAACTGTGCTCCGAC+AGG | 0.517863 | 2.2:-23170444 | MS.gene039102:CDS |
CTTGTCCGAACAGTATGGTT+GGG | 0.522890 | 2.2:-23169001 | MS.gene039102:CDS |
CAAGCACAACAGATTGTACA+TGG | 0.523093 | 2.2:-23169112 | MS.gene039102:CDS |
CTTGCAGAGGCCATTGATGA+GGG | 0.525668 | 2.2:-23169066 | MS.gene039102:CDS |
GGTTCTGCTACTTGCAAGCG+TGG | 0.529459 | 2.2:-23170071 | MS.gene039102:CDS |
GAGGGCCGCAACATCAGGGC+AGG | 0.529545 | 2.2:-23168503 | MS.gene039102:CDS |
TAAACAGGTTCAAGAAGTCT+GGG | 0.532926 | 2.2:+23168691 | None:intergenic |
AAGCTAGACCGTTGGAGGAT+GGG | 0.533264 | 2.2:-23169089 | MS.gene039102:CDS |
GTGGTGGTGGATTGTGTCGA+AGG | 0.535297 | 2.2:-23170479 | MS.gene039102:CDS |
GCGTGTTGCTGTTCAGTGCA+AGG | 0.535855 | 2.2:-23169391 | MS.gene039102:CDS |
GAACACATTGTTGCTGGTGC+AGG | 0.536052 | 2.2:-23169279 | MS.gene039102:CDS |
AAACCTTCCTTTATCAGAAG+CGG | 0.536092 | 2.2:+23169704 | None:intergenic |
CTTGTCCCAACCATACTGTT+CGG | 0.536466 | 2.2:+23168996 | None:intergenic |
GTTCAAGTGTATCCTGAGAA+AGG | 0.538260 | 2.2:-23170260 | MS.gene039102:CDS |
TTCCAGTGGGCATCAAAAGA+AGG | 0.538881 | 2.2:-23168856 | MS.gene039102:CDS |
TCAGTGTGTGTTTGATCACT+GGG | 0.540539 | 2.2:-23168473 | MS.gene039102:CDS |
CGCTGGAATTATAGCGCAAG+AGG | 0.541380 | 2.2:-23170732 | MS.gene039102:CDS |
TATGCTTTGATGTTGTAAAG+TGG | 0.541891 | 2.2:+23168565 | None:intergenic |
ATGTTGTAAAGTGGAGTACC+AGG | 0.543082 | 2.2:+23168574 | None:intergenic |
AAAGCATAAGAGGTCCTTCA+GGG | 0.544007 | 2.2:+23169745 | None:intergenic |
ACACATATCAACCACCATGT+TGG | 0.545736 | 2.2:+23168927 | None:intergenic |
CTCTGAGCTGTAGATGGAGA+GGG | 0.546475 | 2.2:+23169837 | None:intergenic |
TGAGAATGCTAATGTGATCA+TGG | 0.547006 | 2.2:-23170312 | MS.gene039102:CDS |
TTAATCTTATTGATTCCCCT+GGG | 0.548229 | 2.2:-23170559 | MS.gene039102:CDS |
GCTCCTGAGCAAGCTCTTGG+TGG | 0.549556 | 2.2:-23168652 | MS.gene039102:CDS |
TTGCAGGATGATTTCATGGG+TGG | 0.550585 | 2.2:-23169225 | MS.gene039102:CDS |
CTTATCTTCAAACTCGGAGA+GGG | 0.551141 | 2.2:+23168354 | None:intergenic |
TCATCAGATCCATTGGAGGC+TGG | 0.551374 | 2.2:-23168442 | MS.gene039102:CDS |
CCGTGGTTGCTGGATTCCAG+TGG | 0.552245 | 2.2:-23168870 | MS.gene039102:CDS |
TTTGAAGAAATGCAGAGGCC+TGG | 0.554342 | 2.2:-23168592 | MS.gene039102:CDS |
GCTTGTGATCCAGCCTCCAA+TGG | 0.555847 | 2.2:+23168433 | None:intergenic |
TCTGCAAGCCCATCCTCCAA+CGG | 0.557137 | 2.2:+23169081 | None:intergenic |
TAATTCCAGCGGCAGCAACA+AGG | 0.558273 | 2.2:+23170744 | None:intergenic |
CACGTTCAGCTTCATCAGCA+CGG | 0.558462 | 2.2:+23170681 | None:intergenic |
CATGGAAGCTAGACCGTTGG+AGG | 0.559366 | 2.2:-23169094 | MS.gene039102:CDS |
GACCGATATTCGCAAGAGGA+AGG | 0.561820 | 2.2:-23168398 | MS.gene039102:CDS |
ATGAGAAATCGACGTGCCCA+GGG | 0.562701 | 2.2:+23170543 | None:intergenic |
TTCCCGCTTCTGATAAAGGA+AGG | 0.564010 | 2.2:-23169707 | MS.gene039102:CDS |
AATCCAAAGGACTCAATGAC+AGG | 0.564068 | 2.2:+23168538 | None:intergenic |
GCTGCACTTCGAATTACTGA+TGG | 0.565548 | 2.2:-23170509 | MS.gene039102:CDS |
GTGTTCTCCAGACTCCTCAA+TGG | 0.567155 | 2.2:+23169296 | None:intergenic |
TCTTGTCCGAACAGTATGGT+TGG | 0.569952 | 2.2:-23169002 | MS.gene039102:CDS |
TGGTGGTGGATTGTGTCGAA+GGG | 0.570704 | 2.2:-23170478 | MS.gene039102:CDS |
CACTTGTATGAATGATCAGA+AGG | 0.573672 | 2.2:-23170006 | MS.gene039102:CDS |
AATTCCAGCGGCAGCAACAA+GGG | 0.576681 | 2.2:+23170745 | None:intergenic |
TCAGAGGAAAAGGACTTGAT+GGG | 0.576860 | 2.2:-23169939 | MS.gene039102:CDS |
TTGTGGTAACACAGTCGCTA+TGG | 0.577802 | 2.2:-23169517 | MS.gene039102:CDS |
CGTGGTTGCTGGATTCCAGT+GGG | 0.577990 | 2.2:-23168869 | MS.gene039102:CDS |
TGATGGAGCACTAGTGGTGG+TGG | 0.578509 | 2.2:-23170492 | MS.gene039102:CDS |
GAATGCCTGCCCTGATGTTG+CGG | 0.578889 | 2.2:+23168498 | None:intergenic |
GGTAACACAGTCGCTATGGT+TGG | 0.579817 | 2.2:-23169513 | MS.gene039102:CDS |
GATTTGCAGGATGATTTCAT+GGG | 0.581696 | 2.2:-23169228 | MS.gene039102:CDS |
ATACCACCAAGAGCTTGCTC+AGG | 0.582185 | 2.2:+23168649 | None:intergenic |
CTGTTATGAGCCTATCAAGC+AGG | 0.582616 | 2.2:-23170036 | MS.gene039102:CDS |
GCTTGCAGAGGCCATTGATG+AGG | 0.585873 | 2.2:-23169067 | MS.gene039102:CDS |
TCCTTTCTCCAAGAGCCTGT+CGG | 0.585967 | 2.2:+23170429 | None:intergenic |
AAGCCTCCTCTCCATCAACC+TGG | 0.586559 | 2.2:+23170357 | None:intergenic |
ACCGATATTCGCAAGAGGAA+GGG | 0.586677 | 2.2:-23168397 | MS.gene039102:CDS |
TTAAAGCTTATCTTCAAACT+CGG | 0.588371 | 2.2:+23168348 | None:intergenic |
ATGAGGGCACAATAGGTCCA+AGG | 0.589391 | 2.2:-23169050 | MS.gene039102:CDS |
AGTTGAGGGCCGCAACATCA+GGG | 0.589707 | 2.2:-23168507 | MS.gene039102:CDS |
CCTCTGAGCTGTAGATGGAG+AGG | 0.591651 | 2.2:+23169836 | None:intergenic |
ACGTTCAGCTTCATCAGCAC+GGG | 0.591789 | 2.2:+23170682 | None:intergenic |
ATCCCTAGCTTTGTCAACAT+CGG | 0.591971 | 2.2:+23169972 | None:intergenic |
GGTAGCATATTGATCATCAA+GGG | 0.593799 | 2.2:+23169785 | None:intergenic |
CGAACAGTATGGTTGGGACA+AGG | 0.595072 | 2.2:-23168995 | MS.gene039102:CDS |
TCTCTCTGAAGGACACAACT+GGG | 0.596189 | 2.2:+23169181 | None:intergenic |
AATTACTGATGGAGCACTAG+TGG | 0.597933 | 2.2:-23170498 | MS.gene039102:CDS |
CGTGTTGAGAATTTGTATGA+GGG | 0.598437 | 2.2:-23169810 | MS.gene039102:CDS |
TCAATGGTACAAACAACCAT+AGG | 0.599704 | 2.2:+23169312 | None:intergenic |
CAAAGGACTCAATGACAGGA+AGG | 0.599886 | 2.2:+23168542 | None:intergenic |
GATGCTATTCACAGAGGAGG+TGG | 0.602589 | 2.2:-23168769 | MS.gene039102:CDS |
TGAGCTCCAGGTTGATGGAG+AGG | 0.602836 | 2.2:-23170363 | MS.gene039102:CDS |
ACTTGAACATCACCGAGCAA+TGG | 0.603545 | 2.2:+23170275 | None:intergenic |
AAGATGATGGAGAGGCTTTG+GGG | 0.604113 | 2.2:-23170143 | MS.gene039102:CDS |
GGTATCACTATCAAGTCCAC+TGG | 0.604230 | 2.2:-23170659 | MS.gene039102:CDS |
ATTCTCAATAACTCTCGAGA+AGG | 0.605206 | 2.2:+23170328 | None:intergenic |
TAGAAGACTCTCCTAGCAGT+AGG | 0.608055 | 2.2:+23168736 | None:intergenic |
CTCTAGAACAGTCTCTCTGA+AGG | 0.609943 | 2.2:+23169170 | None:intergenic |
GGCCGATGTTGACAAAGCTA+GGG | 0.611665 | 2.2:-23169974 | MS.gene039102:CDS |
ACATATGAAGATCCATTGCT+CGG | 0.611867 | 2.2:-23170287 | MS.gene039102:CDS |
GAATGAAATCAAGGATTCCG+TGG | 0.612773 | 2.2:-23168887 | MS.gene039102:CDS |
TCTGAAGGACACAACTGGGT+CGG | 0.613478 | 2.2:+23169185 | None:intergenic |
GTTCTGCTACTTGCAAGCGT+GGG | 0.613722 | 2.2:-23170070 | MS.gene039102:CDS |
GATGTCATCAGATCCATTGG+AGG | 0.614733 | 2.2:-23168446 | MS.gene039102:CDS |
TCTTGAACCTGTTTACATGG+TGG | 0.615519 | 2.2:-23168683 | MS.gene039102:CDS |
CTCTGTGAATAGCATCTGTG+TGG | 0.615659 | 2.2:+23168776 | None:intergenic |
TGTTGACGAGACAAAGATGA+TGG | 0.617389 | 2.2:-23170156 | MS.gene039102:CDS |
TGCTACATTGACAAACGAGA+AGG | 0.624741 | 2.2:-23169466 | MS.gene039102:CDS |
TCGAAGTGCAGCAGTAACCT+CGG | 0.626299 | 2.2:+23170520 | None:intergenic |
CTCTTGCGCTATAATTCCAG+CGG | 0.626393 | 2.2:+23170733 | None:intergenic |
GTTGGAGGATGGGCTTGCAG+AGG | 0.626552 | 2.2:-23169079 | MS.gene039102:CDS |
AGGGTCACAGTTTCTGATAG+CGG | 0.627247 | 2.2:+23169764 | None:intergenic |
AACCACCATGTTGGGCCCGG+TGG | 0.628249 | 2.2:+23168936 | None:intergenic |
TGAGACCACCGGGCCCAACA+TGG | 0.629138 | 2.2:-23168941 | MS.gene039102:CDS |
AGCAGAACCAGTATTCTTGG+TGG | 0.629458 | 2.2:+23170085 | None:intergenic |
GTACATGGAAGCTAGACCGT+TGG | 0.629595 | 2.2:-23169097 | MS.gene039102:CDS |
AGGGATCACCATGAAATCAG+AGG | 0.629809 | 2.2:-23169955 | MS.gene039102:CDS |
GCTCCAGGTTGATGGAGAGG+AGG | 0.629905 | 2.2:-23170360 | MS.gene039102:CDS |
CCACTGGAATCCAGCAACCA+CGG | 0.634741 | 2.2:+23168870 | None:intergenic |
GGTGGTGGATTGTGTCGAAG+GGG | 0.636411 | 2.2:-23170477 | MS.gene039102:CDS |
ATCAGAAACTGTGACCCTGA+AGG | 0.637113 | 2.2:-23169759 | MS.gene039102:CDS |
GGTTCTGACAGTTAACAAGA+TGG | 0.637494 | 2.2:-23170399 | MS.gene039102:CDS |
ACGAGACAAAGATGATGGAG+AGG | 0.640462 | 2.2:-23170151 | MS.gene039102:CDS |
ACAAATCTTTCTTCTCCCCA+GGG | 0.641869 | 2.2:+23169607 | None:intergenic |
TCTTGGAGAAAGGATCAGGC+CGG | 0.642624 | 2.2:-23170420 | MS.gene039102:CDS |
GTCAGATCATTCCTACTGCT+AGG | 0.642716 | 2.2:-23168747 | MS.gene039102:CDS |
GCACGTCGATTTCTCATCCG+AGG | 0.650068 | 2.2:-23170537 | MS.gene039102:CDS |
TGAGGGCACAATAGGTCCAA+GGG | 0.650429 | 2.2:-23169049 | MS.gene039102:CDS |
TGAAACGTGTCATGCAGACA+TGG | 0.650889 | 2.2:-23169905 | MS.gene039102:CDS |
AGTGTTCTTAATCAGAAGCG+TGG | 0.654359 | 2.2:-23168622 | MS.gene039102:CDS |
TTGTGACCGATATTCGCAAG+AGG | 0.654765 | 2.2:-23168402 | MS.gene039102:CDS |
GCTTATCTTCAAACTCGGAG+AGG | 0.659013 | 2.2:+23168353 | None:intergenic |
AGTGATCAAACACACACTGA+GGG | 0.666361 | 2.2:+23168476 | None:intergenic |
TTATCTTCAAACTCGGAGAG+GGG | 0.667755 | 2.2:+23168355 | None:intergenic |
TGTGAATAGCATCTGTGTGG+AGG | 0.668498 | 2.2:+23168779 | None:intergenic |
TCTGAGCTGTAGATGGAGAG+GGG | 0.671992 | 2.2:+23169838 | None:intergenic |
AGATCTTAGAACGATTCTTG+GGG | 0.672368 | 2.2:+23169022 | None:intergenic |
ATGTCTTTGAAGAAATGCAG+AGG | 0.672505 | 2.2:-23168597 | MS.gene039102:CDS |
ACAGATGCTATTCACAGAGG+AGG | 0.677991 | 2.2:-23168772 | MS.gene039102:CDS |
GACCACCGGGCCCAACATGG+TGG | 0.678120 | 2.2:-23168938 | MS.gene039102:CDS |
ATGATCAGAAGGATAAGTTG+TGG | 0.678564 | 2.2:-23169995 | MS.gene039102:CDS |
GGGTTTGGCAGTCAGCTGTG+AGG | 0.683722 | 2.2:+23168711 | None:intergenic |
CCTCTCCATCTACAGCTCAG+AGG | 0.688379 | 2.2:-23169836 | MS.gene039102:CDS |
GTAGCATATTGATCATCAAG+GGG | 0.693284 | 2.2:+23169786 | None:intergenic |
ATAGTATAAAGAGATACCAG+TGG | 0.698934 | 2.2:+23170643 | None:intergenic |
AAAGAGACAAGAAACTGTTG+AGG | 0.699510 | 2.2:-23169547 | MS.gene039102:CDS |
ATGGTGGTTGATATGTGTAA+GGG | 0.703374 | 2.2:-23168922 | MS.gene039102:CDS |
CAACTGGCTGGAGAATCCAA+AGG | 0.706369 | 2.2:+23168525 | None:intergenic |
ATAGCGACTGTGTTACCACA+AGG | 0.708586 | 2.2:+23169519 | None:intergenic |
TACTGATGGAGCACTAGTGG+TGG | 0.711986 | 2.2:-23170495 | MS.gene039102:CDS |
CAGTGATCAAACACACACTG+AGG | 0.714442 | 2.2:+23168475 | None:intergenic |
CGTGCTGATGAAGCTGAACG+TGG | 0.724162 | 2.2:-23170680 | MS.gene039102:CDS |
TGAGAAATCGACGTGCCCAG+GGG | 0.739636 | 2.2:+23170544 | None:intergenic |
CACACAGATGCTATTCACAG+AGG | 0.756926 | 2.2:-23168775 | MS.gene039102:CDS |
ACTGTTGAGGACGTGCCTTG+TGG | 0.777453 | 2.2:-23169534 | MS.gene039102:CDS |
GTGACTTACTCATCACAGTG+CGG | 0.790076 | 2.2:+23169139 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAATTTAATTTAGGAATA+AGG | - | chr2.2:23168735-23168754 | MS.gene039102:CDS | 10.0% |
!!! | TTTATTTTGTTCAAATAATT+TGG | - | chr2.2:23168423-23168442 | MS.gene039102:CDS | 10.0% |
!! | AATATTAGTGTCATAATTTA+TGG | - | chr2.2:23168532-23168551 | MS.gene039102:CDS | 15.0% |
!! | CATAAAAAGTTTACAAAATA+AGG | + | chr2.2:23168893-23168912 | None:intergenic | 15.0% |
!! | TTGAAGATGTTAATAATATT+TGG | - | chr2.2:23168579-23168598 | MS.gene039102:CDS | 15.0% |
!!! | CTTTTATGAAAAGTATAATA+AGG | - | chr2.2:23168924-23168943 | MS.gene039102:CDS | 15.0% |
!!! | GTAAACTTTTTATGAAAAAT+AGG | - | chr2.2:23168899-23168918 | MS.gene039102:CDS | 15.0% |
!!! | TTATTTTCATTTCATAAACT+AGG | + | chr2.2:23168720-23168739 | None:intergenic | 15.0% |
!! | ACAGTGAATACAATTTATTA+AGG | + | chr2.2:23168866-23168885 | None:intergenic | 20.0% |
!!! | AAGTTTTTTTTTATCCAAAC+AGG | - | chr2.2:23168838-23168857 | MS.gene039102:CDS | 20.0% |
!!! | GATTATTGTTTTGAAATTGT+AGG | - | chr2.2:23169140-23169159 | MS.gene039102:CDS | 20.0% |
! | AATTTATTAAGGAACCTGTT+TGG | + | chr2.2:23168855-23168874 | None:intergenic | 25.0% |
! | ACATAAGTGATTATCATGTT+AGG | - | chr2.2:23168792-23168811 | MS.gene039102:CDS | 25.0% |
! | CACTAAACATGAAATTGAAA+AGG | + | chr2.2:23168639-23168658 | None:intergenic | 25.0% |
! | TTAAAGCTTATCTTCAAACT+CGG | + | chr2.2:23171583-23171602 | None:intergenic | 25.0% |
!! | GTAATATGTCATGTTGATTA+TGG | - | chr2.2:23168464-23168483 | MS.gene039102:CDS | 25.0% |
!!! | ACAACTGTTTAGCTTTTTTT+AGG | - | chr2.2:23169063-23169082 | MS.gene039102:CDS | 25.0% |
!!! | TTTCATGAACAGATTGATTT+TGG | - | chr2.2:23168492-23168511 | MS.gene039102:CDS | 25.0% |
AAAACTTCATAGCACGAATA+GGG | + | chr2.2:23170501-23170520 | None:intergenic | 30.0% | |
AAAGTGGGTGCAATTTATTT+AGG | - | chr2.2:23168951-23168970 | MS.gene039102:CDS | 30.0% | |
AAGATCTTAGAACGATTCTT+GGG | + | chr2.2:23170910-23170929 | None:intergenic | 30.0% | |
AAGATGTATGCCTCTAAATT+TGG | - | chr2.2:23169749-23169768 | MS.gene039102:CDS | 30.0% | |
AAGTGGGTGCAATTTATTTA+GGG | - | chr2.2:23168952-23168971 | MS.gene039102:CDS | 30.0% | |
ACAATAATCGTTATTCTCAC+AGG | + | chr2.2:23169129-23169148 | None:intergenic | 30.0% | |
AGTATAATAAGGACTGAAAG+TGG | - | chr2.2:23168935-23168954 | MS.gene039102:CDS | 30.0% | |
ATAGTATAAAGAGATACCAG+TGG | + | chr2.2:23169288-23169307 | None:intergenic | 30.0% | |
ATCACATACTTCAAAGCAAA+TGG | + | chr2.2:23171124-23171143 | None:intergenic | 30.0% | |
CAATAATCGTTATTCTCACA+GGG | + | chr2.2:23169128-23169147 | None:intergenic | 30.0% | |
CCAATACTTGAATGAAATCA+AGG | - | chr2.2:23171032-23171051 | MS.gene039102:intron | 30.0% | |
CCTTGATTTCATTCAAGTAT+TGG | + | chr2.2:23171035-23171054 | None:intergenic | 30.0% | |
GTATAATAAGGACTGAAAGT+GGG | - | chr2.2:23168936-23168955 | MS.gene039102:CDS | 30.0% | |
TATGCTTTGATGTTGTAAAG+TGG | + | chr2.2:23171366-23171385 | None:intergenic | 30.0% | |
TTTCATAAACTAGGATCTCT+CGG | + | chr2.2:23168711-23168730 | None:intergenic | 30.0% | |
TTTCATGTTTAGTGTCTGTT+TGG | - | chr2.2:23168645-23168664 | MS.gene039102:CDS | 30.0% | |
TTTGACACATAAAGCATAAG+AGG | + | chr2.2:23170196-23170215 | None:intergenic | 30.0% | |
! | TCATCTTGAGATTTGTTTGA+AGG | - | chr2.2:23170678-23170697 | MS.gene039102:CDS | 30.0% |
!! | ATTAATCTTATTGATTCCCC+TGG | - | chr2.2:23169368-23169387 | MS.gene039102:CDS | 30.0% |
!! | TAAAGTTTCAACTGGTTTGA+AGG | - | chr2.2:23170273-23170292 | MS.gene039102:CDS | 30.0% |
!! | TTAATCTTATTGATTCCCCT+GGG | - | chr2.2:23169369-23169388 | MS.gene039102:CDS | 30.0% |
!! | TTTTCTGGTAAAGTTTCAAC+TGG | - | chr2.2:23170265-23170284 | MS.gene039102:CDS | 30.0% |
!!! | AAAGGAAGGTTTTTTGCTTT+TGG | - | chr2.2:23170235-23170254 | MS.gene039102:CDS | 30.0% |
AAACCTTCCTTTATCAGAAG+CGG | + | chr2.2:23170227-23170246 | None:intergenic | 35.0% | |
AAAGAGACAAGAAACTGTTG+AGG | - | chr2.2:23170381-23170400 | MS.gene039102:CDS | 35.0% | |
ACATATGAAGATCCATTGCT+CGG | - | chr2.2:23169641-23169660 | MS.gene039102:CDS | 35.0% | |
ACTTCTTGAACCTGTTTACA+TGG | - | chr2.2:23171242-23171261 | MS.gene039102:intron | 35.0% | |
AGATCTTAGAACGATTCTTG+GGG | + | chr2.2:23170909-23170928 | None:intergenic | 35.0% | |
ATCTTGTTAACTGTCAGAAC+CGG | + | chr2.2:23169530-23169549 | None:intergenic | 35.0% | |
ATGATCAGAAGGATAAGTTG+TGG | - | chr2.2:23169933-23169952 | MS.gene039102:CDS | 35.0% | |
ATTCTCAATAACTCTCGAGA+AGG | + | chr2.2:23169603-23169622 | None:intergenic | 35.0% | |
CAAGATCTTAGAACGATTCT+TGG | + | chr2.2:23170911-23170930 | None:intergenic | 35.0% | |
CACTTGTATGAATGATCAGA+AGG | - | chr2.2:23169922-23169941 | MS.gene039102:CDS | 35.0% | |
CGTGTTGAGAATTTGTATGA+GGG | - | chr2.2:23170118-23170137 | MS.gene039102:CDS | 35.0% | |
GAAAACTTCATAGCACGAAT+AGG | + | chr2.2:23170502-23170521 | None:intergenic | 35.0% | |
GATTTGCAGGATGATTTCAT+GGG | - | chr2.2:23170700-23170719 | MS.gene039102:CDS | 35.0% | |
GGTAGCATATTGATCATCAA+GGG | + | chr2.2:23170146-23170165 | None:intergenic | 35.0% | |
GGTTTATTCGAGTCTATCAA+CGG | - | chr2.2:23168672-23168691 | MS.gene039102:CDS | 35.0% | |
GGTTTGAAGGTCAGAATTAT+GGG | - | chr2.2:23170286-23170305 | MS.gene039102:CDS | 35.0% | |
GTAGCATATTGATCATCAAG+GGG | + | chr2.2:23170145-23170164 | None:intergenic | 35.0% | |
GTGTTCAGAGAACTGTTATT+TGG | - | chr2.2:23170353-23170372 | MS.gene039102:CDS | 35.0% | |
GTTATTGCTCATGTTGATCA+TGG | - | chr2.2:23168354-23168373 | MS.gene039102:CDS | 35.0% | |
GTTTGTCAATGTAGCATTCT+TGG | + | chr2.2:23170458-23170477 | None:intergenic | 35.0% | |
TAAACAGGTTCAAGAAGTCT+GGG | + | chr2.2:23171240-23171259 | None:intergenic | 35.0% | |
TACAATCTGTTGTGCTTGTT+GGG | + | chr2.2:23170814-23170833 | None:intergenic | 35.0% | |
TATGATGTCATCAGATCCAT+TGG | - | chr2.2:23171479-23171498 | MS.gene039102:intron | 35.0% | |
TATGGTTGTTTGTACCATTG+AGG | - | chr2.2:23170618-23170637 | MS.gene039102:CDS | 35.0% | |
TCAATGGTACAAACAACCAT+AGG | + | chr2.2:23170619-23170638 | None:intergenic | 35.0% | |
TCGTGTTGAGAATTTGTATG+AGG | - | chr2.2:23170117-23170136 | MS.gene039102:CDS | 35.0% | |
TGAGAATGCTAATGTGATCA+TGG | - | chr2.2:23169616-23169635 | MS.gene039102:CDS | 35.0% | |
TGGTTTGAAGGTCAGAATTA+TGG | - | chr2.2:23170285-23170304 | MS.gene039102:CDS | 35.0% | |
TGTTTAGTGTCTGTTTGGAT+CGG | - | chr2.2:23168650-23168669 | MS.gene039102:CDS | 35.0% | |
TTCATAAACTAGGATCTCTC+GGG | + | chr2.2:23168710-23168729 | None:intergenic | 35.0% | |
! | ATGGTGGTTGATATGTGTAA+GGG | - | chr2.2:23171006-23171025 | MS.gene039102:intron | 35.0% |
! | ATGTCTTTGAAGAAATGCAG+AGG | - | chr2.2:23171331-23171350 | MS.gene039102:intron | 35.0% |
! | CAGAGAACTGTTATTTGGAT+GGG | - | chr2.2:23170358-23170377 | MS.gene039102:CDS | 35.0% |
! | GATTTGTTTGAAGGATTTGC+AGG | - | chr2.2:23170687-23170706 | MS.gene039102:CDS | 35.0% |
! | TCAGAGAACTGTTATTTGGA+TGG | - | chr2.2:23170357-23170376 | MS.gene039102:CDS | 35.0% |
! | TCCAAAACACCAGATTTTCT+TGG | + | chr2.2:23170965-23170984 | None:intergenic | 35.0% |
!! | GCTTCTCTGAAGAGTTTTAA+GGG | - | chr2.2:23169320-23169339 | MS.gene039102:CDS | 35.0% |
!! | TAGCTTGTTGTTGTTGCTAT+AGG | - | chr2.2:23168759-23168778 | MS.gene039102:CDS | 35.0% |
!!! | CTTCTCTGAAGAGTTTTAAG+GGG | - | chr2.2:23169321-23169340 | MS.gene039102:CDS | 35.0% |
!!! | TTCTCTGAAGAGTTTTAAGG+GGG | - | chr2.2:23169322-23169341 | MS.gene039102:CDS | 35.0% |
AAAGCAACTGTTCCTTTCTC+AGG | + | chr2.2:23169683-23169702 | None:intergenic | 40.0% | |
AAAGCATAAGAGGTCCTTCA+GGG | + | chr2.2:23170186-23170205 | None:intergenic | 40.0% | |
AAATGGACCACCAAGAATAC+TGG | - | chr2.2:23169836-23169855 | MS.gene039102:CDS | 40.0% | |
AACCTTCCTTTATCAGAAGC+GGG | + | chr2.2:23170226-23170245 | None:intergenic | 40.0% | |
AAGATCTTGTCCGAACAGTA+TGG | - | chr2.2:23170922-23170941 | MS.gene039102:intron | 40.0% | |
AATCCAAAGGACTCAATGAC+AGG | + | chr2.2:23171393-23171412 | None:intergenic | 40.0% | |
ACAAATCTTTCTTCTCCCCA+GGG | + | chr2.2:23170324-23170343 | None:intergenic | 40.0% | |
ACACATATCAACCACCATGT+TGG | + | chr2.2:23171004-23171023 | None:intergenic | 40.0% | |
AGGATCTTGCCAAGAAAATC+TGG | - | chr2.2:23170953-23170972 | MS.gene039102:intron | 40.0% | |
AGTAGCAGAACCAGTATTCT+TGG | + | chr2.2:23169849-23169868 | None:intergenic | 40.0% | |
AGTGATCAAACACACACTGA+GGG | + | chr2.2:23171455-23171474 | None:intergenic | 40.0% | |
AGTGTTCTTAATCAGAAGCG+TGG | - | chr2.2:23171306-23171325 | MS.gene039102:intron | 40.0% | |
ATCAGAGGAAAAGGACTTGA+TGG | - | chr2.2:23169988-23170007 | MS.gene039102:CDS | 40.0% | |
ATGATTCCCGCTTCTGATAA+AGG | - | chr2.2:23170217-23170236 | MS.gene039102:CDS | 40.0% | |
CAAGCACAACAGATTGTACA+TGG | - | chr2.2:23170816-23170835 | MS.gene039102:intron | 40.0% | |
CACATATCAACCACCATGTT+GGG | + | chr2.2:23171003-23171022 | None:intergenic | 40.0% | |
CACCATGAAATCAGAGGAAA+AGG | - | chr2.2:23169979-23169998 | MS.gene039102:CDS | 40.0% | |
CGGTAGCATATTGATCATCA+AGG | + | chr2.2:23170147-23170166 | None:intergenic | 40.0% | |
CTCGTCAACACCAAATTTAG+AGG | + | chr2.2:23169762-23169781 | None:intergenic | 40.0% | |
CTTATCTTCAAACTCGGAGA+GGG | + | chr2.2:23171577-23171596 | None:intergenic | 40.0% | |
GAATGAAATCAAGGATTCCG+TGG | - | chr2.2:23171041-23171060 | MS.gene039102:intron | 40.0% | |
GGATTTGCAGGATGATTTCA+TGG | - | chr2.2:23170699-23170718 | MS.gene039102:CDS | 40.0% | |
GGCATACATCTTTGCAAAGT+TGG | + | chr2.2:23169741-23169760 | None:intergenic | 40.0% | |
GTAAACAGGTTCAAGAAGTC+TGG | + | chr2.2:23171241-23171260 | None:intergenic | 40.0% | |
GTACAATCTGTTGTGCTTGT+TGG | + | chr2.2:23170815-23170834 | None:intergenic | 40.0% | |
GTGTTAATGACCTGCTTGAT+AGG | + | chr2.2:23169905-23169924 | None:intergenic | 40.0% | |
GTTCAAGTGTATCCTGAGAA+AGG | - | chr2.2:23169668-23169687 | MS.gene039102:CDS | 40.0% | |
GTTTAGTGTCTGTTTGGATC+GGG | - | chr2.2:23168651-23168670 | MS.gene039102:CDS | 40.0% | |
TAAAGCATAAGAGGTCCTTC+AGG | + | chr2.2:23170187-23170206 | None:intergenic | 40.0% | |
TACAAATCTTTCTTCTCCCC+AGG | + | chr2.2:23170325-23170344 | None:intergenic | 40.0% | |
TCAGAGGAAAAGGACTTGAT+GGG | - | chr2.2:23169989-23170008 | MS.gene039102:CDS | 40.0% | |
TCAGTGTGTGTTTGATCACT+GGG | - | chr2.2:23171455-23171474 | MS.gene039102:intron | 40.0% | |
TCTTGAACCTGTTTACATGG+TGG | - | chr2.2:23171245-23171264 | MS.gene039102:intron | 40.0% | |
TCTTGCTAAGTCAGATCCTA+TGG | - | chr2.2:23170600-23170619 | MS.gene039102:CDS | 40.0% | |
TGCATGACACGTTTCATCAA+AGG | + | chr2.2:23170019-23170038 | None:intergenic | 40.0% | |
TGCTACATTGACAAACGAGA+AGG | - | chr2.2:23170462-23170481 | MS.gene039102:CDS | 40.0% | |
TGCTCATGTTGATCATGGTA+TGG | - | chr2.2:23168359-23168378 | MS.gene039102:CDS | 40.0% | |
TGGATTTCCACCATGTAAAC+AGG | + | chr2.2:23171255-23171274 | None:intergenic | 40.0% | |
TGTTGACGAGACAAAGATGA+TGG | - | chr2.2:23169772-23169791 | MS.gene039102:CDS | 40.0% | |
TTATCTTCAAACTCGGAGAG+GGG | + | chr2.2:23171576-23171595 | None:intergenic | 40.0% | |
TTGAGACCTTCAACAAGCTT+AGG | + | chr2.2:23170577-23170596 | None:intergenic | 40.0% | |
! | AATTACTGATGGAGCACTAG+TGG | - | chr2.2:23169430-23169449 | MS.gene039102:CDS | 40.0% |
! | ATGTTGTAAAGTGGAGTACC+AGG | + | chr2.2:23171357-23171376 | None:intergenic | 40.0% |
! | CATGGTGGTTGATATGTGTA+AGG | - | chr2.2:23171005-23171024 | MS.gene039102:intron | 40.0% |
! | GCCAAGAAAATCTGGTGTTT+TGG | - | chr2.2:23170961-23170980 | MS.gene039102:intron | 40.0% |
! | GCTTTTGGTCGTGTATTTTC+TGG | - | chr2.2:23170250-23170269 | MS.gene039102:CDS | 40.0% |
! | GGTTCTGACAGTTAACAAGA+TGG | - | chr2.2:23169529-23169548 | MS.gene039102:CDS | 40.0% |
! | GTCCTTTTCCTCTGATTTCA+TGG | + | chr2.2:23169984-23170003 | None:intergenic | 40.0% |
!! | AAAGATGATGGAGAGGCTTT+GGG | - | chr2.2:23169784-23169803 | MS.gene039102:CDS | 40.0% |
!! | ATCCCTAGCTTTGTCAACAT+CGG | + | chr2.2:23169959-23169978 | None:intergenic | 40.0% |
!! | CGCTTCTCTGAAGAGTTTTA+AGG | - | chr2.2:23169319-23169338 | MS.gene039102:CDS | 40.0% |
!! | GATCTTCCTAAGCTTGTTGA+AGG | - | chr2.2:23170568-23170587 | MS.gene039102:CDS | 40.0% |
ACAGATGCTATTCACAGAGG+AGG | - | chr2.2:23171156-23171175 | MS.gene039102:intron | 45.0% | |
ACCGATATTCGCAAGAGGAA+GGG | - | chr2.2:23171531-23171550 | MS.gene039102:intron | 45.0% | |
ACCTATTGTGCCCTCATCAA+TGG | + | chr2.2:23170875-23170894 | None:intergenic | 45.0% | |
ACTTGAACATCACCGAGCAA+TGG | + | chr2.2:23169656-23169675 | None:intergenic | 45.0% | |
AGCAGAACCAGTATTCTTGG+TGG | + | chr2.2:23169846-23169865 | None:intergenic | 45.0% | |
AGGGATCACCATGAAATCAG+AGG | - | chr2.2:23169973-23169992 | MS.gene039102:CDS | 45.0% | |
AGGGTCACAGTTTCTGATAG+CGG | + | chr2.2:23170167-23170186 | None:intergenic | 45.0% | |
AGGTTCAAGAAGTCTGGGTT+TGG | + | chr2.2:23171235-23171254 | None:intergenic | 45.0% | |
ATAGCGACTGTGTTACCACA+AGG | + | chr2.2:23170412-23170431 | None:intergenic | 45.0% | |
ATCAGAAACTGTGACCCTGA+AGG | - | chr2.2:23170169-23170188 | MS.gene039102:CDS | 45.0% | |
ATTATAGCGCAAGAGGTTGC+TGG | - | chr2.2:23169203-23169222 | MS.gene039102:CDS | 45.0% | |
CAAAGGACTCAATGACAGGA+AGG | + | chr2.2:23171389-23171408 | None:intergenic | 45.0% | |
CACACAGATGCTATTCACAG+AGG | - | chr2.2:23171153-23171172 | MS.gene039102:intron | 45.0% | |
CAGTGATCAAACACACACTG+AGG | + | chr2.2:23171456-23171475 | None:intergenic | 45.0% | |
CTCAGTGTGTGTTTGATCAC+TGG | - | chr2.2:23171454-23171473 | MS.gene039102:intron | 45.0% | |
CTCTGTGAATAGCATCTGTG+TGG | + | chr2.2:23171155-23171174 | None:intergenic | 45.0% | |
CTCTTGCGCTATAATTCCAG+CGG | + | chr2.2:23169198-23169217 | None:intergenic | 45.0% | |
CTGTTATGAGCCTATCAAGC+AGG | - | chr2.2:23169892-23169911 | MS.gene039102:CDS | 45.0% | |
CTTCCTGTCATTGAGTCCTT+TGG | - | chr2.2:23171387-23171406 | MS.gene039102:intron | 45.0% | |
CTTGTCCCAACCATACTGTT+CGG | + | chr2.2:23170935-23170954 | None:intergenic | 45.0% | |
CTTGTCCGAACAGTATGGTT+GGG | - | chr2.2:23170927-23170946 | MS.gene039102:intron | 45.0% | |
GATGTCATCAGATCCATTGG+AGG | - | chr2.2:23171482-23171501 | MS.gene039102:intron | 45.0% | |
GCTGCACTTCGAATTACTGA+TGG | - | chr2.2:23169419-23169438 | MS.gene039102:CDS | 45.0% | |
GCTTATCTTCAAACTCGGAG+AGG | + | chr2.2:23171578-23171597 | None:intergenic | 45.0% | |
GGTATCACTATCAAGTCCAC+TGG | - | chr2.2:23169269-23169288 | MS.gene039102:CDS | 45.0% | |
GTCAGATCATTCCTACTGCT+AGG | - | chr2.2:23171181-23171200 | MS.gene039102:intron | 45.0% | |
GTGACTTACTCATCACAGTG+CGG | + | chr2.2:23170792-23170811 | None:intergenic | 45.0% | |
GTTTGTACCATTGAGGAGTC+TGG | - | chr2.2:23170625-23170644 | MS.gene039102:CDS | 45.0% | |
TAGAAGACTCTCCTAGCAGT+AGG | + | chr2.2:23171195-23171214 | None:intergenic | 45.0% | |
TCGATCCTGCCACTAAGAAA+TGG | - | chr2.2:23169819-23169838 | MS.gene039102:CDS | 45.0% | |
TCTGGAGAACACATTGTTGC+TGG | - | chr2.2:23170643-23170662 | MS.gene039102:CDS | 45.0% | |
TCTTGTCCGAACAGTATGGT+TGG | - | chr2.2:23170926-23170945 | MS.gene039102:intron | 45.0% | |
TGAAACGTGTCATGCAGACA+TGG | - | chr2.2:23170023-23170042 | MS.gene039102:CDS | 45.0% | |
TGTGAATAGCATCTGTGTGG+AGG | + | chr2.2:23171152-23171171 | None:intergenic | 45.0% | |
TTCCAGTGGGCATCAAAAGA+AGG | - | chr2.2:23171072-23171091 | MS.gene039102:intron | 45.0% | |
TTCCCGCTTCTGATAAAGGA+AGG | - | chr2.2:23170221-23170240 | MS.gene039102:CDS | 45.0% | |
TTCTCCCCAGGGACAAAATT+TGG | + | chr2.2:23170313-23170332 | None:intergenic | 45.0% | |
TTGCAGGATGATTTCATGGG+TGG | - | chr2.2:23170703-23170722 | MS.gene039102:CDS | 45.0% | |
TTGTGACCGATATTCGCAAG+AGG | - | chr2.2:23171526-23171545 | MS.gene039102:intron | 45.0% | |
TTGTGGTAACACAGTCGCTA+TGG | - | chr2.2:23170411-23170430 | MS.gene039102:CDS | 45.0% | |
TTTGAAGAAATGCAGAGGCC+TGG | - | chr2.2:23171336-23171355 | MS.gene039102:intron | 45.0% | |
! | ATGGGACCAAATTTTGTCCC+TGG | - | chr2.2:23170304-23170323 | MS.gene039102:CDS | 45.0% |
! | CTTGGTGGTCCATTTCTTAG+TGG | + | chr2.2:23169831-23169850 | None:intergenic | 45.0% |
! | TCTCTCTGAAGGACACAACT+GGG | + | chr2.2:23170750-23170769 | None:intergenic | 45.0% |
! | TGGGACCAAATTTTGTCCCT+GGG | - | chr2.2:23170305-23170324 | MS.gene039102:CDS | 45.0% |
!! | AAGATGATGGAGAGGCTTTG+GGG | - | chr2.2:23169785-23169804 | MS.gene039102:CDS | 45.0% |
!! | ACGAGACAAAGATGATGGAG+AGG | - | chr2.2:23169777-23169796 | MS.gene039102:CDS | 45.0% |
!! | CAAAGATGATGGAGAGGCTT+TGG | - | chr2.2:23169783-23169802 | MS.gene039102:CDS | 45.0% |
!! | CTCTAGAACAGTCTCTCTGA+AGG | + | chr2.2:23170761-23170780 | None:intergenic | 45.0% |
!!! | AAATGAAAATAATTTAATTT+AGG | - | chr2.2:23168728-23168747 | MS.gene039102:CDS | 5.0% |
AAGCTAGACCGTTGGAGGAT+GGG | - | chr2.2:23170839-23170858 | MS.gene039102:intron | 50.0% | |
AATTCCAGCGGCAGCAACAA+GGG | + | chr2.2:23169186-23169205 | None:intergenic | 50.0% | |
ACGTTCAGCTTCATCAGCAC+GGG | + | chr2.2:23169249-23169268 | None:intergenic | 50.0% | |
AGGCTCTTGGAGAAAGGATC+AGG | - | chr2.2:23169504-23169523 | MS.gene039102:CDS | 50.0% | |
ATCAAGGATTCCGTGGTTGC+TGG | - | chr2.2:23171048-23171067 | MS.gene039102:intron | 50.0% | |
ATGAGAAATCGACGTGCCCA+GGG | + | chr2.2:23169388-23169407 | None:intergenic | 50.0% | |
CAACTGGCTGGAGAATCCAA+AGG | + | chr2.2:23171406-23171425 | None:intergenic | 50.0% | |
CACGTTCAGCTTCATCAGCA+CGG | + | chr2.2:23169250-23169269 | None:intergenic | 50.0% | |
CGAACAGTATGGTTGGGACA+AGG | - | chr2.2:23170933-23170952 | MS.gene039102:intron | 50.0% | |
CGATACCTCTGAGCTGTAGA+TGG | + | chr2.2:23170100-23170119 | None:intergenic | 50.0% | |
CGCTGGAATTATAGCGCAAG+AGG | - | chr2.2:23169196-23169215 | MS.gene039102:CDS | 50.0% | |
CTCTGAGCTGTAGATGGAGA+GGG | + | chr2.2:23170094-23170113 | None:intergenic | 50.0% | |
CTTGCAGAGGCCATTGATGA+GGG | - | chr2.2:23170862-23170881 | MS.gene039102:intron | 50.0% | |
GAACACATTGTTGCTGGTGC+AGG | - | chr2.2:23170649-23170668 | MS.gene039102:CDS | 50.0% | |
GACCGATATTCGCAAGAGGA+AGG | - | chr2.2:23171530-23171549 | MS.gene039102:intron | 50.0% | |
GATGCTATTCACAGAGGAGG+TGG | - | chr2.2:23171159-23171178 | MS.gene039102:intron | 50.0% | |
GCCCTTCCTCTTGCGAATAT+CGG | + | chr2.2:23171535-23171554 | None:intergenic | 50.0% | |
GGCCGATGTTGACAAAGCTA+GGG | - | chr2.2:23169954-23169973 | MS.gene039102:CDS | 50.0% | |
GGTAACACAGTCGCTATGGT+TGG | - | chr2.2:23170415-23170434 | MS.gene039102:CDS | 50.0% | |
GTACATGGAAGCTAGACCGT+TGG | - | chr2.2:23170831-23170850 | MS.gene039102:intron | 50.0% | |
GTGGTCCATTTCTTAGTGGC+AGG | + | chr2.2:23169827-23169846 | None:intergenic | 50.0% | |
GTGTTCTCCAGACTCCTCAA+TGG | + | chr2.2:23170635-23170654 | None:intergenic | 50.0% | |
TAATTCCAGCGGCAGCAACA+AGG | + | chr2.2:23169187-23169206 | None:intergenic | 50.0% | |
TCATCAGATCCATTGGAGGC+TGG | - | chr2.2:23171486-23171505 | MS.gene039102:intron | 50.0% | |
TCCTTTCTCCAAGAGCCTGT+CGG | + | chr2.2:23169502-23169521 | None:intergenic | 50.0% | |
TCGAAGTGCAGCAGTAACCT+CGG | + | chr2.2:23169411-23169430 | None:intergenic | 50.0% | |
TCTGAAGGACACAACTGGGT+CGG | + | chr2.2:23170746-23170765 | None:intergenic | 50.0% | |
TCTGAGCTGTAGATGGAGAG+GGG | + | chr2.2:23170093-23170112 | None:intergenic | 50.0% | |
TCTTGGAGAAAGGATCAGGC+CGG | - | chr2.2:23169508-23169527 | MS.gene039102:CDS | 50.0% | |
TGAACAGCAACACGCACAAC+AGG | + | chr2.2:23170532-23170551 | None:intergenic | 50.0% | |
TGGATTCTCCAGCCAGTTGA+GGG | - | chr2.2:23171407-23171426 | MS.gene039102:intron | 50.0% | |
TGGCCGATGTTGACAAAGCT+AGG | - | chr2.2:23169953-23169972 | MS.gene039102:CDS | 50.0% | |
TTGGATTCTCCAGCCAGTTG+AGG | - | chr2.2:23171406-23171425 | MS.gene039102:intron | 50.0% | |
! | ATACCACCAAGAGCTTGCTC+AGG | + | chr2.2:23171282-23171301 | None:intergenic | 50.0% |
! | ATGAGGGCACAATAGGTCCA+AGG | - | chr2.2:23170878-23170897 | MS.gene039102:intron | 50.0% |
! | CAAGAAGTGCAGTGCTTGCT+GGG | + | chr2.2:23170051-23170070 | None:intergenic | 50.0% |
! | CACAGTCGCTATGGTTGGTT+TGG | - | chr2.2:23170420-23170439 | MS.gene039102:CDS | 50.0% |
! | CACCTTCTTTTGATGCCCAC+TGG | + | chr2.2:23171077-23171096 | None:intergenic | 50.0% |
! | GCCATTGATGAGGGCACAAT+AGG | - | chr2.2:23170871-23170890 | MS.gene039102:intron | 50.0% |
! | GGAACAGTTGCTTTCTCTGC+TGG | - | chr2.2:23169689-23169708 | MS.gene039102:CDS | 50.0% |
! | GGGACCAAATTTTGTCCCTG+GGG | - | chr2.2:23170306-23170325 | MS.gene039102:CDS | 50.0% |
! | GTCTCTCTGAAGGACACAAC+TGG | + | chr2.2:23170751-23170770 | None:intergenic | 50.0% |
! | GTTCTGCTACTTGCAAGCGT+GGG | - | chr2.2:23169858-23169877 | MS.gene039102:CDS | 50.0% |
! | TACTGATGGAGCACTAGTGG+TGG | - | chr2.2:23169433-23169452 | MS.gene039102:CDS | 50.0% |
! | TCAAGAAGTGCAGTGCTTGC+TGG | + | chr2.2:23170052-23170071 | None:intergenic | 50.0% |
! | TGAGGGCACAATAGGTCCAA+GGG | - | chr2.2:23170879-23170898 | MS.gene039102:intron | 50.0% |
! | TTCCTTGAGCTCCAGGTTGA+TGG | - | chr2.2:23169560-23169579 | MS.gene039102:CDS | 50.0% |
!! | CTCTGCTGGTTTGCATGGTT+GGG | - | chr2.2:23169703-23169722 | MS.gene039102:CDS | 50.0% |
!! | GCTTTCTCTGCTGGTTTGCA+TGG | - | chr2.2:23169698-23169717 | MS.gene039102:CDS | 50.0% |
!! | TCTCTGCTGGTTTGCATGGT+TGG | - | chr2.2:23169702-23169721 | MS.gene039102:CDS | 50.0% |
!! | TGGTGGTGGATTGTGTCGAA+GGG | - | chr2.2:23169450-23169469 | MS.gene039102:CDS | 50.0% |
!! | TGTTTTGGACCTGAGACCAC+CGG | - | chr2.2:23170976-23170995 | MS.gene039102:intron | 50.0% |
!!! | AGTTTTAAGGGGGAGCGCAA+TGG | - | chr2.2:23169332-23169351 | MS.gene039102:CDS | 50.0% |
!!! | GTTTTAAGGGGGAGCGCAAT+GGG | - | chr2.2:23169333-23169352 | MS.gene039102:CDS | 50.0% |
AAGCCTCCTCTCCATCAACC+TGG | + | chr2.2:23169574-23169593 | None:intergenic | 55.0% | |
ACTGTTGAGGACGTGCCTTG+TGG | - | chr2.2:23170394-23170413 | MS.gene039102:CDS | 55.0% | |
AGTTGAGGGCCGCAACATCA+GGG | - | chr2.2:23171421-23171440 | MS.gene039102:intron | 55.0% | |
ATCAACCACCATGTTGGGCC+CGG | + | chr2.2:23170998-23171017 | None:intergenic | 55.0% | |
CAAGCTCCTGAGCAAGCTCT+TGG | - | chr2.2:23171273-23171292 | MS.gene039102:intron | 55.0% | |
CAGATGCTTCCTTGAGCTCC+AGG | - | chr2.2:23169553-23169572 | MS.gene039102:CDS | 55.0% | |
CATGGAAGCTAGACCGTTGG+AGG | - | chr2.2:23170834-23170853 | MS.gene039102:intron | 55.0% | |
CCACTGGAATCCAGCAACCA+CGG | + | chr2.2:23171061-23171080 | None:intergenic | 55.0% | |
CCTCTCCATCTACAGCTCAG+AGG | - | chr2.2:23170092-23170111 | MS.gene039102:CDS | 55.0% | |
CCTCTGAGCTGTAGATGGAG+AGG | + | chr2.2:23170095-23170114 | None:intergenic | 55.0% | |
CGATTCTTGGGGTCATCCCT+TGG | + | chr2.2:23170898-23170917 | None:intergenic | 55.0% | |
CGTGGTTGCTGGATTCCAGT+GGG | - | chr2.2:23171059-23171078 | MS.gene039102:intron | 55.0% | |
CTCCATCAACCTGGAGCTCA+AGG | + | chr2.2:23169565-23169584 | None:intergenic | 55.0% | |
GAAGCTAGACCGTTGGAGGA+TGG | - | chr2.2:23170838-23170857 | MS.gene039102:intron | 55.0% | |
GAATGCCTGCCCTGATGTTG+CGG | + | chr2.2:23171433-23171452 | None:intergenic | 55.0% | |
GACTGAAACTGTGCTCCGAC+AGG | - | chr2.2:23169484-23169503 | MS.gene039102:CDS | 55.0% | |
GATGAGAAATCGACGTGCCC+AGG | + | chr2.2:23169389-23169408 | None:intergenic | 55.0% | |
GCTTGCAGAGGCCATTGATG+AGG | - | chr2.2:23170861-23170880 | MS.gene039102:intron | 55.0% | |
GCTTGTGATCCAGCCTCCAA+TGG | + | chr2.2:23171498-23171517 | None:intergenic | 55.0% | |
TCCGACAGGCTCTTGGAGAA+AGG | - | chr2.2:23169498-23169517 | MS.gene039102:CDS | 55.0% | |
TCGCAAGAGGAAGGGCTTGA+AGG | - | chr2.2:23171539-23171558 | MS.gene039102:intron | 55.0% | |
TCTGCAAGCCCATCCTCCAA+CGG | + | chr2.2:23170850-23170869 | None:intergenic | 55.0% | |
TGAGAAATCGACGTGCCCAG+GGG | + | chr2.2:23169387-23169406 | None:intergenic | 55.0% | |
! | CAAGAGCTTGCTCAGGAGCT+TGG | + | chr2.2:23171275-23171294 | None:intergenic | 55.0% |
! | CGTGCTGATGAAGCTGAACG+TGG | - | chr2.2:23169248-23169267 | MS.gene039102:CDS | 55.0% |
! | GCGTGTTGCTGTTCAGTGCA+AGG | - | chr2.2:23170537-23170556 | MS.gene039102:CDS | 55.0% |
! | GGTTCTGCTACTTGCAAGCG+TGG | - | chr2.2:23169857-23169876 | MS.gene039102:CDS | 55.0% |
! | TGATGGAGCACTAGTGGTGG+TGG | - | chr2.2:23169436-23169455 | MS.gene039102:CDS | 55.0% |
!! | GCACGTCGATTTCTCATCCG+AGG | - | chr2.2:23169391-23169410 | MS.gene039102:CDS | 55.0% |
!! | GGTGGTGGATTGTGTCGAAG+GGG | - | chr2.2:23169451-23169470 | MS.gene039102:CDS | 55.0% |
!! | GTGGTGGTGGATTGTGTCGA+AGG | - | chr2.2:23169449-23169468 | MS.gene039102:CDS | 55.0% |
!! | GTTTTGGACCTGAGACCACC+GGG | - | chr2.2:23170977-23170996 | MS.gene039102:intron | 55.0% |
!! | TGAGCTCCAGGTTGATGGAG+AGG | - | chr2.2:23169565-23169584 | MS.gene039102:CDS | 55.0% |
ACTGTGCTCCGACAGGCTCT+TGG | - | chr2.2:23169491-23169510 | MS.gene039102:CDS | 60.0% | |
CAGTTGAGGGCCGCAACATC+AGG | - | chr2.2:23171420-23171439 | MS.gene039102:intron | 60.0% | |
CCGTGGTTGCTGGATTCCAG+TGG | - | chr2.2:23171058-23171077 | MS.gene039102:intron | 60.0% | |
CTGATGTTGCGGCCCTCAAC+TGG | + | chr2.2:23171422-23171441 | None:intergenic | 60.0% | |
GATTCCCTTGTTGCTGCCGC+TGG | - | chr2.2:23169179-23169198 | MS.gene039102:CDS | 60.0% | |
GCTCCTGAGCAAGCTCTTGG+TGG | - | chr2.2:23171276-23171295 | MS.gene039102:intron | 60.0% | |
GGGTTTGGCAGTCAGCTGTG+AGG | + | chr2.2:23171220-23171239 | None:intergenic | 60.0% | |
! | GTTGGAGGATGGGCTTGCAG+AGG | - | chr2.2:23170849-23170868 | MS.gene039102:intron | 60.0% |
!! | GCTCCAGGTTGATGGAGAGG+AGG | - | chr2.2:23169568-23169587 | MS.gene039102:CDS | 60.0% |
AACCACCATGTTGGGCCCGG+TGG | + | chr2.2:23170995-23171014 | None:intergenic | 65.0% | |
ATGTTGGGCCCGGTGGTCTC+AGG | + | chr2.2:23170988-23171007 | None:intergenic | 65.0% | |
TGAGACCACCGGGCCCAACA+TGG | - | chr2.2:23170987-23171006 | MS.gene039102:intron | 65.0% | |
TGTTGCGGCCCTCAACTGGC+TGG | + | chr2.2:23171418-23171437 | None:intergenic | 65.0% | |
GACCACCGGGCCCAACATGG+TGG | - | chr2.2:23170990-23171009 | MS.gene039102:intron | 70.0% | |
GAGGGCCGCAACATCAGGGC+AGG | - | chr2.2:23171425-23171444 | MS.gene039102:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 23168348 | 23171602 | 23168348 | ID=MS.gene039102 |
chr2.2 | mRNA | 23168348 | 23171602 | 23168348 | ID=MS.gene039102.t1;Parent=MS.gene039102 |
chr2.2 | exon | 23171575 | 23171602 | 23171575 | ID=MS.gene039102.t1.exon1;Parent=MS.gene039102.t1 |
chr2.2 | CDS | 23171575 | 23171602 | 23171575 | ID=cds.MS.gene039102.t1;Parent=MS.gene039102.t1 |
chr2.2 | exon | 23168348 | 23170788 | 23168348 | ID=MS.gene039102.t1.exon2;Parent=MS.gene039102.t1 |
chr2.2 | CDS | 23168348 | 23170788 | 23168348 | ID=cds.MS.gene039102.t1;Parent=MS.gene039102.t1 |
Gene Sequence |
Protein sequence |