Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039700.t1 | XP_003598626.1 | 98.3 | 355 | 6 | 0 | 1 | 355 | 46 | 400 | 6.50E-184 | 653.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039700.t1 | Q8L7A4 | 69.2 | 354 | 96 | 2 | 3 | 355 | 44 | 385 | 7.2e-139 | 495.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039700.t1 | G7IYV8 | 98.3 | 355 | 6 | 0 | 1 | 355 | 46 | 400 | 4.7e-184 | 653.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene039700 | MS.gene03069 | PPI |
| MS.gene039700 | MS.gene47863 | PPI |
| MS.gene039700 | MS.gene003302 | PPI |
| MS.gene02100 | MS.gene039700 | PPI |
| MS.gene039700 | MS.gene058821 | PPI |
| MS.gene039700 | MS.gene058831 | PPI |
| MS.gene039700 | MS.gene023667 | PPI |
| MS.gene27907 | MS.gene039700 | PPI |
| MS.gene039700 | MS.gene74542 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039700.t1 | MTR_3g017500 | 98.028 | 355 | 7 | 0 | 1 | 355 | 46 | 400 | 0.0 | 715 |
| MS.gene039700.t1 | MTR_3g017500 | 97.458 | 354 | 9 | 0 | 2 | 355 | 17 | 370 | 0.0 | 711 |
| MS.gene039700.t1 | MTR_8g038400 | 74.648 | 355 | 89 | 1 | 2 | 355 | 13 | 367 | 0.0 | 546 |
| MS.gene039700.t1 | MTR_8g088320 | 47.727 | 352 | 147 | 5 | 2 | 353 | 6 | 320 | 2.55e-115 | 337 |
| MS.gene039700.t1 | MTR_2g030230 | 45.714 | 350 | 152 | 4 | 6 | 355 | 18 | 329 | 4.84e-108 | 319 |
| MS.gene039700.t1 | MTR_2g011590 | 45.283 | 159 | 78 | 2 | 197 | 351 | 3 | 156 | 4.20e-38 | 134 |
| MS.gene039700.t1 | MTR_3g067585 | 44.444 | 162 | 81 | 2 | 194 | 351 | 1 | 157 | 5.95e-38 | 134 |
| MS.gene039700.t1 | MTR_8g107340 | 41.250 | 160 | 93 | 1 | 194 | 353 | 17 | 175 | 1.54e-37 | 133 |
| MS.gene039700.t1 | MTR_2g027100 | 45.860 | 157 | 84 | 1 | 194 | 349 | 1 | 157 | 7.66e-35 | 125 |
| MS.gene039700.t1 | MTR_1g031650 | 44.231 | 156 | 85 | 2 | 197 | 351 | 5 | 159 | 2.25e-34 | 124 |
| MS.gene039700.t1 | MTR_6g069470 | 38.728 | 173 | 102 | 2 | 181 | 353 | 3 | 171 | 1.13e-31 | 117 |
| MS.gene039700.t1 | MTR_4g084280 | 39.394 | 165 | 91 | 2 | 194 | 354 | 1 | 160 | 4.09e-31 | 116 |
| MS.gene039700.t1 | MTR_6g080710 | 43.478 | 115 | 64 | 1 | 9 | 123 | 19 | 132 | 2.94e-24 | 100 |
| MS.gene039700.t1 | MTR_2g080950 | 41.803 | 122 | 63 | 3 | 9 | 130 | 19 | 132 | 8.34e-24 | 102 |
| MS.gene039700.t1 | MTR_8g464390 | 44.248 | 113 | 55 | 3 | 9 | 121 | 19 | 123 | 4.27e-23 | 100 |
| MS.gene039700.t1 | MTR_1g031650 | 42.623 | 122 | 69 | 1 | 230 | 351 | 2 | 122 | 3.33e-22 | 91.3 |
| MS.gene039700.t1 | MTR_8g100100 | 39.583 | 144 | 61 | 4 | 9 | 127 | 497 | 639 | 1.53e-20 | 93.6 |
| MS.gene039700.t1 | MTR_8g100100 | 39.583 | 144 | 61 | 4 | 9 | 127 | 503 | 645 | 1.57e-20 | 93.6 |
| MS.gene039700.t1 | MTR_7g020860 | 39.552 | 134 | 56 | 3 | 12 | 121 | 508 | 640 | 3.58e-19 | 89.4 |
| MS.gene039700.t1 | MTR_8g067090 | 54.688 | 64 | 28 | 1 | 18 | 81 | 22 | 84 | 2.93e-18 | 85.5 |
| MS.gene039700.t1 | MTR_8g471120 | 54.688 | 64 | 28 | 1 | 18 | 81 | 22 | 84 | 2.93e-18 | 85.5 |
| MS.gene039700.t1 | MTR_7g020860 | 50.575 | 87 | 40 | 2 | 9 | 93 | 505 | 590 | 3.28e-18 | 86.3 |
| MS.gene039700.t1 | MTR_8g067080 | 51.429 | 70 | 33 | 1 | 12 | 81 | 16 | 84 | 4.92e-18 | 85.1 |
| MS.gene039700.t1 | MTR_8g471110 | 51.429 | 70 | 33 | 1 | 12 | 81 | 16 | 84 | 4.92e-18 | 85.1 |
| MS.gene039700.t1 | MTR_8g067080 | 51.429 | 70 | 33 | 1 | 12 | 81 | 16 | 84 | 5.00e-18 | 85.1 |
| MS.gene039700.t1 | MTR_1g069000 | 48.052 | 77 | 39 | 1 | 8 | 84 | 6 | 81 | 5.12e-18 | 85.5 |
| MS.gene039700.t1 | MTR_7g099830 | 48.052 | 77 | 39 | 1 | 8 | 84 | 6 | 81 | 1.72e-17 | 83.6 |
| MS.gene039700.t1 | MTR_3g098680 | 35.000 | 140 | 66 | 3 | 6 | 121 | 497 | 635 | 3.01e-17 | 83.6 |
| MS.gene039700.t1 | MTR_4g074170 | 45.349 | 86 | 43 | 3 | 9 | 91 | 481 | 565 | 2.64e-15 | 77.8 |
| MS.gene039700.t1 | MTR_1g008950 | 36.264 | 91 | 56 | 2 | 199 | 287 | 4 | 94 | 5.84e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039700.t1 | AT3G07940 | 70.056 | 354 | 93 | 2 | 3 | 355 | 44 | 385 | 0.0 | 514 |
| MS.gene039700.t1 | AT4G05330 | 48.571 | 350 | 152 | 4 | 6 | 355 | 15 | 336 | 3.47e-118 | 345 |
| MS.gene039700.t1 | AT4G05330 | 48.571 | 350 | 152 | 4 | 6 | 355 | 15 | 336 | 3.47e-118 | 345 |
| MS.gene039700.t1 | AT4G21160 | 48.286 | 350 | 154 | 4 | 6 | 355 | 15 | 337 | 5.67e-118 | 345 |
| MS.gene039700.t1 | AT4G21160 | 48.286 | 350 | 154 | 4 | 6 | 355 | 15 | 337 | 5.67e-118 | 345 |
| MS.gene039700.t1 | AT4G21160 | 48.286 | 350 | 154 | 4 | 6 | 355 | 15 | 337 | 5.67e-118 | 345 |
| MS.gene039700.t1 | AT4G21160 | 48.286 | 350 | 154 | 4 | 6 | 355 | 15 | 337 | 5.67e-118 | 345 |
| MS.gene039700.t1 | AT4G05330 | 48.607 | 323 | 138 | 4 | 33 | 355 | 7 | 301 | 2.48e-105 | 311 |
| MS.gene039700.t1 | AT3G07940 | 62.882 | 229 | 72 | 2 | 3 | 230 | 44 | 260 | 7.89e-102 | 301 |
| MS.gene039700.t1 | AT1G70790 | 45.752 | 153 | 82 | 1 | 198 | 349 | 6 | 158 | 1.24e-37 | 134 |
| MS.gene039700.t1 | AT1G70790 | 45.752 | 153 | 82 | 1 | 198 | 349 | 6 | 158 | 1.24e-37 | 134 |
| MS.gene039700.t1 | AT1G70790 | 45.752 | 153 | 82 | 1 | 198 | 349 | 6 | 158 | 1.24e-37 | 134 |
| MS.gene039700.t1 | AT1G66360 | 42.593 | 162 | 92 | 1 | 194 | 354 | 1 | 162 | 3.81e-37 | 132 |
| MS.gene039700.t1 | AT1G70800 | 42.073 | 164 | 94 | 1 | 186 | 349 | 2 | 164 | 6.60e-37 | 131 |
| MS.gene039700.t1 | AT1G73580 | 42.500 | 160 | 91 | 1 | 194 | 353 | 4 | 162 | 8.47e-37 | 131 |
| MS.gene039700.t1 | AT1G70810 | 41.139 | 158 | 92 | 1 | 194 | 351 | 1 | 157 | 1.72e-34 | 125 |
| MS.gene039700.t1 | AT5G37740 | 41.875 | 160 | 91 | 1 | 194 | 351 | 1 | 160 | 4.64e-34 | 124 |
| MS.gene039700.t1 | AT2G01540 | 42.484 | 153 | 87 | 1 | 198 | 349 | 6 | 158 | 2.48e-33 | 122 |
| MS.gene039700.t1 | AT5G47710 | 40.881 | 159 | 93 | 1 | 194 | 351 | 1 | 159 | 2.18e-32 | 119 |
| MS.gene039700.t1 | AT5G47710 | 40.881 | 159 | 93 | 1 | 194 | 351 | 1 | 159 | 2.18e-32 | 119 |
| MS.gene039700.t1 | AT5G47710 | 40.881 | 159 | 93 | 1 | 194 | 351 | 1 | 159 | 2.18e-32 | 119 |
| MS.gene039700.t1 | AT5G47710 | 40.881 | 159 | 93 | 1 | 194 | 351 | 1 | 159 | 2.18e-32 | 119 |
| MS.gene039700.t1 | AT1G48590 | 39.024 | 164 | 91 | 2 | 194 | 353 | 6 | 164 | 2.55e-32 | 119 |
| MS.gene039700.t1 | AT1G48590 | 39.024 | 164 | 91 | 2 | 194 | 353 | 6 | 164 | 2.55e-32 | 119 |
| MS.gene039700.t1 | AT1G48590 | 39.024 | 164 | 91 | 2 | 194 | 353 | 37 | 195 | 4.34e-32 | 119 |
| MS.gene039700.t1 | AT1G23140 | 37.888 | 161 | 99 | 1 | 194 | 354 | 1 | 160 | 1.22e-31 | 117 |
| MS.gene039700.t1 | AT3G17980 | 36.585 | 164 | 95 | 2 | 194 | 353 | 13 | 171 | 2.59e-31 | 117 |
| MS.gene039700.t1 | AT5G37740 | 39.412 | 170 | 91 | 2 | 194 | 351 | 1 | 170 | 5.43e-31 | 116 |
| MS.gene039700.t1 | AT5G54310 | 38.235 | 170 | 89 | 3 | 9 | 170 | 19 | 180 | 4.07e-25 | 106 |
| MS.gene039700.t1 | AT3G17660 | 40.708 | 113 | 59 | 2 | 9 | 121 | 19 | 123 | 2.43e-24 | 98.6 |
| MS.gene039700.t1 | AT3G17660 | 40.708 | 113 | 59 | 2 | 9 | 121 | 19 | 123 | 5.18e-24 | 99.0 |
| MS.gene039700.t1 | AT3G17660 | 40.708 | 113 | 59 | 2 | 9 | 121 | 19 | 123 | 1.43e-23 | 98.2 |
| MS.gene039700.t1 | AT1G70790 | 43.697 | 119 | 66 | 1 | 232 | 349 | 3 | 121 | 1.40e-22 | 92.8 |
| MS.gene039700.t1 | AT5G61980 | 40.146 | 137 | 57 | 3 | 9 | 121 | 501 | 636 | 6.27e-19 | 88.6 |
| MS.gene039700.t1 | AT5G13300 | 51.724 | 87 | 39 | 2 | 9 | 93 | 504 | 589 | 6.38e-19 | 88.6 |
| MS.gene039700.t1 | AT2G35210 | 50.725 | 69 | 33 | 1 | 12 | 80 | 16 | 83 | 7.29e-18 | 84.3 |
| MS.gene039700.t1 | AT3G17660 | 37.931 | 116 | 48 | 4 | 9 | 121 | 19 | 113 | 8.78e-18 | 81.6 |
| MS.gene039700.t1 | AT2G35210 | 50.725 | 69 | 33 | 1 | 12 | 80 | 16 | 83 | 1.35e-17 | 83.6 |
| MS.gene039700.t1 | AT1G48590 | 30.488 | 164 | 73 | 3 | 194 | 353 | 37 | 163 | 2.05e-17 | 79.3 |
| MS.gene039700.t1 | AT5G46750 | 50.725 | 69 | 33 | 1 | 12 | 80 | 16 | 83 | 2.25e-17 | 83.2 |
| MS.gene039700.t1 | AT2G37550 | 46.753 | 77 | 40 | 1 | 8 | 84 | 6 | 81 | 5.06e-17 | 82.4 |
| MS.gene039700.t1 | AT2G37550 | 46.753 | 77 | 40 | 1 | 8 | 84 | 6 | 81 | 5.06e-17 | 82.4 |
| MS.gene039700.t1 | AT1G10870 | 40.000 | 130 | 57 | 5 | 17 | 127 | 478 | 605 | 5.49e-17 | 82.8 |
| MS.gene039700.t1 | AT4G17890 | 49.275 | 69 | 34 | 1 | 12 | 80 | 19 | 86 | 1.06e-16 | 80.9 |
| MS.gene039700.t1 | AT3G53710 | 46.154 | 78 | 41 | 1 | 8 | 85 | 6 | 82 | 1.33e-16 | 81.3 |
| MS.gene039700.t1 | AT3G53710 | 46.154 | 78 | 41 | 1 | 8 | 85 | 6 | 82 | 1.33e-16 | 81.3 |
| MS.gene039700.t1 | AT3G53710 | 46.154 | 78 | 41 | 1 | 8 | 85 | 6 | 82 | 1.33e-16 | 81.3 |
| MS.gene039700.t1 | AT4G17890 | 49.275 | 69 | 34 | 1 | 12 | 80 | 19 | 86 | 1.50e-16 | 80.9 |
| MS.gene039700.t1 | AT1G10870 | 38.519 | 135 | 57 | 5 | 17 | 127 | 478 | 610 | 2.40e-16 | 80.9 |
| MS.gene039700.t1 | AT1G60860 | 54.688 | 64 | 27 | 1 | 17 | 78 | 367 | 430 | 4.09e-15 | 77.0 |
| MS.gene039700.t1 | AT1G60860 | 54.688 | 64 | 27 | 1 | 17 | 78 | 307 | 370 | 4.43e-15 | 77.0 |
| MS.gene039700.t1 | AT1G60860 | 54.688 | 64 | 27 | 1 | 17 | 78 | 478 | 541 | 4.57e-15 | 77.0 |
| MS.gene039700.t1 | AT1G03370 | 37.778 | 90 | 55 | 1 | 201 | 289 | 3 | 92 | 9.31e-12 | 67.0 |
| MS.gene039700.t1 | AT1G03370 | 37.778 | 90 | 55 | 1 | 201 | 289 | 3 | 92 | 1.45e-11 | 66.2 |
Find 65 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAATACTTACACCCATTT+TGG | 0.186231 | 3.3:+10674744 | None:intergenic |
| ATTAAGGTTAATGTAGTTAA+AGG | 0.211722 | 3.3:-10672637 | MS.gene039700:CDS |
| TGAATTTGTTGGATTGATTA+AGG | 0.287189 | 3.3:-10672653 | MS.gene039700:CDS |
| AGTCAATGCAGCTTGGAAAA+TGG | 0.292719 | 3.3:-10672013 | MS.gene039700:CDS |
| TCTTGCGTGGGATGGTATAA+AGG | 0.303502 | 3.3:+10673464 | None:intergenic |
| GTGGATCATCAGAGCCAAAA+TGG | 0.335283 | 3.3:-10674758 | MS.gene039700:CDS |
| AGAACAATTTAAATCCTGTT+TGG | 0.340329 | 3.3:-10672439 | MS.gene039700:CDS |
| TCAATGGAAGAATTCGGTTT+TGG | 0.341563 | 3.3:+10673682 | None:intergenic |
| ACGAACGTACCTTAGATATA+TGG | 0.348879 | 3.3:+10673919 | None:intergenic |
| GCAGGTATGGTTGAATTTGT+TGG | 0.378256 | 3.3:-10672664 | MS.gene039700:CDS |
| CCTTATGTCATCCTTTCTCT+TGG | 0.379448 | 3.3:-10672577 | MS.gene039700:CDS |
| AACATCAGGTCTTCAAGTCT+TGG | 0.381673 | 3.3:-10673990 | MS.gene039700:intron |
| GTCAATGCAGCTTGGAAAAT+GGG | 0.386273 | 3.3:-10672012 | MS.gene039700:CDS |
| CCTAGGAGTCCATATATCTA+AGG | 0.390014 | 3.3:-10673928 | MS.gene039700:intron |
| TTAAGAGGAGGGATGTTCTC+AGG | 0.396970 | 3.3:+10672392 | None:intergenic |
| AGAGAGCGATGGATGTTATC+TGG | 0.401047 | 3.3:-10674982 | None:intergenic |
| TCTCTCATCTATTGAGTAAG+AGG | 0.407997 | 3.3:+10671858 | None:intergenic |
| GGCTATCATTTCGAAACAGC+TGG | 0.413504 | 3.3:-10673350 | MS.gene039700:CDS |
| TCTCAGGGATTGACAGCATT+AGG | 0.419633 | 3.3:+10672408 | None:intergenic |
| CGCTCCTCAATGGAAGAATT+CGG | 0.431409 | 3.3:+10673676 | None:intergenic |
| ATTAGGCTTTCATTCCAAAC+AGG | 0.437169 | 3.3:+10672425 | None:intergenic |
| AAACAACTAGAAATCGTATT+GGG | 0.442080 | 3.3:-10673371 | MS.gene039700:CDS |
| AGTCGATTCATTGGTCAACT+TGG | 0.444047 | 3.3:-10673764 | MS.gene039700:CDS |
| CAAACAACTAGAAATCGTAT+TGG | 0.459695 | 3.3:-10673372 | MS.gene039700:CDS |
| TTTATTTGCATCAAGTGCTC+TGG | 0.459972 | 3.3:-10673963 | MS.gene039700:CDS |
| GGAATAATATCTCTTGAAGA+AGG | 0.465885 | 3.3:-10671957 | MS.gene039700:CDS |
| TTTACTGTTATAGGCAGGTA+TGG | 0.466561 | 3.3:-10672677 | MS.gene039700:intron |
| GACAATCTGATGCGTCAAGC+AGG | 0.474603 | 3.3:-10674801 | MS.gene039700:CDS |
| AAAATCAGAGCGCTCCTCAA+TGG | 0.477617 | 3.3:+10673666 | None:intergenic |
| AGACGAACAAGTCGATTCAT+TGG | 0.483436 | 3.3:-10673773 | MS.gene039700:CDS |
| GTTTGAGGAACTGCTCTGAC+TGG | 0.484449 | 3.3:+10673431 | None:intergenic |
| TGAAGAAGGGAAAGTGAGAC+AGG | 0.489048 | 3.3:-10671943 | MS.gene039700:CDS |
| TTGTGGAGGATTGTAGTTTG+AGG | 0.495974 | 3.3:+10673416 | None:intergenic |
| CTTGCGTGGGATGGTATAAA+GGG | 0.496671 | 3.3:+10673465 | None:intergenic |
| TGTCACTGAATCTAGATGAA+TGG | 0.499000 | 3.3:-10673798 | MS.gene039700:CDS |
| CCAAGAGAAAGGATGACATA+AGG | 0.500819 | 3.3:+10672577 | None:intergenic |
| GATTCATTGGTCAACTTGGG+TGG | 0.513627 | 3.3:-10673760 | MS.gene039700:CDS |
| TCACTATATCTCTGATAGCT+AGG | 0.520516 | 3.3:+10672608 | None:intergenic |
| CAAGAGAAAGGATGACATAA+GGG | 0.522273 | 3.3:+10672578 | None:intergenic |
| CCTTAGATATATGGACTCCT+AGG | 0.529324 | 3.3:+10673928 | None:intergenic |
| GTCGATTCATTGGTCAACTT+GGG | 0.529688 | 3.3:-10673763 | MS.gene039700:CDS |
| GACAATACACTTGTGAAAGA+TGG | 0.535420 | 3.3:-10671978 | MS.gene039700:CDS |
| TGGATCATCAGAGCCAAAAT+GGG | 0.539189 | 3.3:-10674757 | MS.gene039700:CDS |
| ATCATGGAGTCAATGCAGCT+TGG | 0.540788 | 3.3:-10672020 | MS.gene039700:CDS |
| TAAGAGGAGGGATGTTCTCA+GGG | 0.542262 | 3.3:+10672393 | None:intergenic |
| TCACTTGGTGACCAAGAGAA+AGG | 0.546656 | 3.3:+10672566 | None:intergenic |
| GCTATCATTTCGAAACAGCT+GGG | 0.550078 | 3.3:-10673349 | MS.gene039700:CDS |
| ATATGAGAAATCATCAATCA+TGG | 0.553492 | 3.3:-10672036 | MS.gene039700:CDS |
| TGGATGAAGTTGTTCTTGCG+TGG | 0.558865 | 3.3:+10673451 | None:intergenic |
| GGATGAAGTTGTTCTTGCGT+GGG | 0.571202 | 3.3:+10673452 | None:intergenic |
| GATCACTAGGTCCACAGGAA+AGG | 0.571277 | 3.3:-10674827 | MS.gene039700:intron |
| AACAAGTTCTGTGCTGATTG+TGG | 0.576035 | 3.3:-10674777 | MS.gene039700:CDS |
| CTTCCGATCACTAGGTCCAC+AGG | 0.578366 | 3.3:-10674832 | MS.gene039700:intron |
| AAAACCGAATTCTTCCATTG+AGG | 0.580396 | 3.3:-10673680 | MS.gene039700:CDS |
| GAATAATATCTCTTGAAGAA+GGG | 0.592669 | 3.3:-10671956 | MS.gene039700:CDS |
| TACAAAGAAGAGTAACTCGT+TGG | 0.593650 | 3.3:-10673301 | MS.gene039700:intron |
| GAAGTTGTTCTTGCGTGGGA+TGG | 0.594112 | 3.3:+10673456 | None:intergenic |
| TCTGGTATACATAGAAGCCT+AGG | 0.599149 | 3.3:-10673945 | MS.gene039700:CDS |
| AGATTGTCTAACCTTTCCTG+TGG | 0.600164 | 3.3:+10674816 | None:intergenic |
| GGGACAAATCAAATTCTCCT+CGG | 0.602338 | 3.3:+10673485 | None:intergenic |
| ACAATCTGATGCGTCAAGCA+GGG | 0.621759 | 3.3:-10674800 | MS.gene039700:CDS |
| CTTGGAAAATGGGTAGCAAG+TGG | 0.649585 | 3.3:-10672002 | MS.gene039700:CDS |
| AGGCTACAAAATGTTGAGAG+AGG | 0.650552 | 3.3:-10671909 | MS.gene039700:CDS |
| CTATCATTTCGAAACAGCTG+GGG | 0.665639 | 3.3:-10673348 | MS.gene039700:CDS |
| TGAGACAGGAAATCTCATTG+AGG | 0.699747 | 3.3:-10671929 | MS.gene039700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTATCAAAACTAAAT+TGG | + | chr3.3:10672372-10672391 | None:intergenic | 10.0% |
| !! | GAGAAAAAAAAAAAAAAAAT+AGG | - | chr3.3:10674002-10674021 | MS.gene039700:intron | 10.0% |
| !! | AAAAAAAAAAATAGGGATAA+AGG | - | chr3.3:10674010-10674029 | MS.gene039700:intron | 15.0% |
| !! | GATAAATGTAACAATTAAAA+GGG | + | chr3.3:10671887-10671906 | None:intergenic | 15.0% |
| !! | TAATAGAACAAAAAAATTAC+AGG | + | chr3.3:10673696-10673715 | None:intergenic | 15.0% |
| !! | TGATAAATGTAACAATTAAA+AGG | + | chr3.3:10671888-10671907 | None:intergenic | 15.0% |
| !!! | TCTTTTTAATTTTATTATCC+AGG | - | chr3.3:10673297-10673316 | MS.gene039700:intron | 15.0% |
| !!! | TTGAAATATTACATTTTTCT+TGG | - | chr3.3:10674106-10674125 | MS.gene039700:intron | 15.0% |
| !! | AAAAGAAAAGTGAAAAACAA+TGG | + | chr3.3:10673283-10673302 | None:intergenic | 20.0% |
| !! | AAAATAAAAAAATTTGTCCG+AGG | + | chr3.3:10672682-10672701 | None:intergenic | 20.0% |
| !! | AAATGTTACATAGACTAAAA+TGG | + | chr3.3:10673733-10673752 | None:intergenic | 20.0% |
| !! | AAGCAAAAAATATATACTAC+AGG | - | chr3.3:10673895-10673914 | MS.gene039700:intron | 20.0% |
| !! | AGCAAAAAATATATACTACA+GGG | - | chr3.3:10673896-10673915 | MS.gene039700:intron | 20.0% |
| !! | ATAGACTAAAATGGAAAAAT+AGG | + | chr3.3:10673724-10673743 | None:intergenic | 20.0% |
| !! | ATTAAGGTTAATGTAGTTAA+AGG | - | chr3.3:10674199-10674218 | MS.gene039700:intron | 20.0% |
| !! | ATTCATATTTATCTTGAGAT+AGG | - | chr3.3:10673254-10673273 | MS.gene039700:intron | 20.0% |
| !! | TAGACTAAAATGGAAAAATA+GGG | + | chr3.3:10673723-10673742 | None:intergenic | 20.0% |
| !!! | ATTCAAAAATGACGATTTTA+TGG | - | chr3.3:10674731-10674750 | MS.gene039700:intron | 20.0% |
| !!! | ATTCAACTTACTATTTTAAG+AGG | + | chr3.3:10674462-10674481 | None:intergenic | 20.0% |
| !!! | TAATTTGTTTATCCAAACAT+GGG | + | chr3.3:10672414-10672433 | None:intergenic | 20.0% |
| !!! | TTAATTTGTTTATCCAAACA+TGG | + | chr3.3:10672415-10672434 | None:intergenic | 20.0% |
| !!! | TTCAAAAATGACGATTTTAT+GGG | - | chr3.3:10674732-10674751 | MS.gene039700:intron | 20.0% |
| ! | AAACAACTAGAAATCGTATT+GGG | - | chr3.3:10673465-10673484 | MS.gene039700:CDS | 25.0% |
| ! | ACATGATTTGACATGATTAT+AGG | - | chr3.3:10673012-10673031 | MS.gene039700:intron | 25.0% |
| ! | ACTTATCATAATGTTTGCAA+AGG | - | chr3.3:10674319-10674338 | MS.gene039700:intron | 25.0% |
| ! | AGAACAATTTAAATCCTGTT+TGG | - | chr3.3:10674397-10674416 | MS.gene039700:intron | 25.0% |
| ! | ATATGAGAAATCATCAATCA+TGG | - | chr3.3:10674800-10674819 | MS.gene039700:CDS | 25.0% |
| ! | ATCAAATAACCAACATTATC+CGG | - | chr3.3:10671904-10671923 | MS.gene039700:CDS | 25.0% |
| ! | CATCATTTGAAAAATAAGCA+TGG | - | chr3.3:10674503-10674522 | MS.gene039700:intron | 25.0% |
| ! | CTAAAGATGGATATATTACA+GGG | + | chr3.3:10673656-10673675 | None:intergenic | 25.0% |
| ! | GAATAATATCTCTTGAAGAA+GGG | - | chr3.3:10674880-10674899 | MS.gene039700:intron | 25.0% |
| ! | TGCTAAAACAAAATGTTACA+AGG | - | chr3.3:10673972-10673991 | MS.gene039700:CDS | 25.0% |
| ! | TTGAAAAATAAGCATGGAAT+TGG | - | chr3.3:10674509-10674528 | MS.gene039700:intron | 25.0% |
| !! | GATTTTATTAGGTAACTAAC+TGG | - | chr3.3:10673187-10673206 | MS.gene039700:intron | 25.0% |
| !!! | AACTTACTATTTTAAGAGGA+GGG | + | chr3.3:10674458-10674477 | None:intergenic | 25.0% |
| !!! | TCATAACGTTTTTTTTCTTG+TGG | + | chr3.3:10673440-10673459 | None:intergenic | 25.0% |
| !!! | TGAATTTGTTGGATTGATTA+AGG | - | chr3.3:10674183-10674202 | MS.gene039700:intron | 25.0% |
| !!! | TTGTTTGAAAAGCATTATCT+TGG | - | chr3.3:10672161-10672180 | MS.gene039700:intron | 25.0% |
| !!! | TTTGGTTTTTTTATGTAGCT+TGG | + | chr3.3:10673139-10673158 | None:intergenic | 25.0% |
| !!! | TTTTTTCAGATAAGTGCTTA+TGG | - | chr3.3:10672509-10672528 | MS.gene039700:intron | 25.0% |
| AAACTATACAAATCATGCTG+CGG | + | chr3.3:10672328-10672347 | None:intergenic | 30.0% | |
| AAATGATGTCTCACAGAAAA+TGG | + | chr3.3:10674491-10674510 | None:intergenic | 30.0% | |
| AAGGAACAATAAGATTTGTG+TGG | + | chr3.3:10672218-10672237 | None:intergenic | 30.0% | |
| ACTTATTTAAGCTGATCTAC+TGG | + | chr3.3:10672594-10672613 | None:intergenic | 30.0% | |
| AGTGTAAGCTCAAAGATTAA+GGG | + | chr3.3:10671973-10671992 | None:intergenic | 30.0% | |
| ATAGAAAGTTTCATGTCTCA+AGG | + | chr3.3:10672743-10672762 | None:intergenic | 30.0% | |
| CAAACAACTAGAAATCGTAT+TGG | - | chr3.3:10673464-10673483 | MS.gene039700:CDS | 30.0% | |
| CCTAAAGATGGATATATTAC+AGG | + | chr3.3:10673657-10673676 | None:intergenic | 30.0% | |
| CCTGTAATATATCCATCTTT+AGG | - | chr3.3:10673654-10673673 | MS.gene039700:intron | 30.0% | |
| CTTTGAGTCTCTAACATATA+GGG | + | chr3.3:10673878-10673897 | None:intergenic | 30.0% | |
| GGAATAATATCTCTTGAAGA+AGG | - | chr3.3:10674879-10674898 | MS.gene039700:intron | 30.0% | |
| GTTTCAACAAAACCTAAAGA+TGG | + | chr3.3:10673669-10673688 | None:intergenic | 30.0% | |
| TAGTGTAAGCTCAAAGATTA+AGG | + | chr3.3:10671974-10671993 | None:intergenic | 30.0% | |
| TCCCTATATGTTTGAAAACT+CGG | - | chr3.3:10673770-10673789 | MS.gene039700:CDS | 30.0% | |
| TCTCAGTTATAACTTAGACA+AGG | + | chr3.3:10672237-10672256 | None:intergenic | 30.0% | |
| TTAATATCTGATCTTGCAGT+CGG | - | chr3.3:10674356-10674375 | MS.gene039700:intron | 30.0% | |
| TTCTCCCTATTTACTGTTAT+AGG | - | chr3.3:10674150-10674169 | MS.gene039700:intron | 30.0% | |
| ! | ACCGAGTTTTCAAACATATA+GGG | + | chr3.3:10673774-10673793 | None:intergenic | 30.0% |
| ! | AGGGATAAAGGTATATTACA+GGG | - | chr3.3:10674022-10674041 | MS.gene039700:intron | 30.0% |
| ! | AGTTGAAATTGATAGTCCTA+AGG | + | chr3.3:10672271-10672290 | None:intergenic | 30.0% |
| ! | ATATGAGCTGCAACAATTTT+TGG | - | chr3.3:10673325-10673344 | MS.gene039700:CDS | 30.0% |
| ! | ATCACAAGAAGTTTAGAATG+AGG | - | chr3.3:10672712-10672731 | MS.gene039700:intron | 30.0% |
| ! | TACCGAGTTTTCAAACATAT+AGG | + | chr3.3:10673775-10673794 | None:intergenic | 30.0% |
| ! | TAGGGATAAAGGTATATTAC+AGG | - | chr3.3:10674021-10674040 | MS.gene039700:intron | 30.0% |
| ! | TTACTTCTTAAGCGATGTTT+TGG | - | chr3.3:10674567-10674586 | MS.gene039700:intron | 30.0% |
| !! | CAACTTACTATTTTAAGAGG+AGG | + | chr3.3:10674459-10674478 | None:intergenic | 30.0% |
| !!! | AATTTTGGCTCATTCAAAAG+TGG | + | chr3.3:10674595-10674614 | None:intergenic | 30.0% |
| !!! | TAACGTTTTTTTTCTTGTGG+AGG | + | chr3.3:10673437-10673456 | None:intergenic | 30.0% |
| AAAACCGAATTCTTCCATTG+AGG | - | chr3.3:10673156-10673175 | MS.gene039700:intron | 35.0% | |
| AACATAAACACTTGTGAGAC+CGG | + | chr3.3:10671926-10671945 | None:intergenic | 35.0% | |
| ACCTGCCTATAACAGTAAAT+AGG | + | chr3.3:10674158-10674177 | None:intergenic | 35.0% | |
| ACGAACGTACCTTAGATATA+TGG | + | chr3.3:10672920-10672939 | None:intergenic | 35.0% | |
| ACGTTTAATTAGCCCATGTT+TGG | - | chr3.3:10672399-10672418 | MS.gene039700:CDS | 35.0% | |
| ACTGAGAATCATCTTGAGAA+TGG | - | chr3.3:10674051-10674070 | MS.gene039700:intron | 35.0% | |
| AGAAATCGAACGCAAACTAT+AGG | + | chr3.3:10674644-10674663 | None:intergenic | 35.0% | |
| ATTAGGCTTTCATTCCAAAC+AGG | + | chr3.3:10674414-10674433 | None:intergenic | 35.0% | |
| CAAGAGAAAGGATGACATAA+GGG | + | chr3.3:10674261-10674280 | None:intergenic | 35.0% | |
| CCTGCCTATAACAGTAAATA+GGG | + | chr3.3:10674157-10674176 | None:intergenic | 35.0% | |
| CTGAGAATCATCTTGAGAAT+GGG | - | chr3.3:10674052-10674071 | MS.gene039700:intron | 35.0% | |
| GACAATACACTTGTGAAAGA+TGG | - | chr3.3:10674858-10674877 | MS.gene039700:intron | 35.0% | |
| GTTTATCTCTCCTACTTGTA+AGG | - | chr3.3:10672638-10672657 | MS.gene039700:CDS | 35.0% | |
| TACAAAGAAGAGTAACTCGT+TGG | - | chr3.3:10673535-10673554 | MS.gene039700:intron | 35.0% | |
| TCAAAGATTAAGGGTCTGTT+TGG | + | chr3.3:10671964-10671983 | None:intergenic | 35.0% | |
| TCACTATATCTCTGATAGCT+AGG | + | chr3.3:10674231-10674250 | None:intergenic | 35.0% | |
| TCGTATACAATCTGCATGTA+AGG | + | chr3.3:10674702-10674721 | None:intergenic | 35.0% | |
| TGTCACTGAATCTAGATGAA+TGG | - | chr3.3:10673038-10673057 | MS.gene039700:intron | 35.0% | |
| TTTACTGTTATAGGCAGGTA+TGG | - | chr3.3:10674159-10674178 | MS.gene039700:intron | 35.0% | |
| TTTATTTGCATCAAGTGCTC+TGG | - | chr3.3:10672873-10672892 | MS.gene039700:intron | 35.0% | |
| ! | AAATGACGATTTTATGGGAG+AGG | - | chr3.3:10674737-10674756 | MS.gene039700:intron | 35.0% |
| ! | CTCAAGATGATTCTCAGTTT+TGG | + | chr3.3:10674049-10674068 | None:intergenic | 35.0% |
| ! | GCTTTGAGTCTCTAACATAT+AGG | + | chr3.3:10673879-10673898 | None:intergenic | 35.0% |
| ! | GTGAATACTTACACCCATTT+TGG | + | chr3.3:10672095-10672114 | None:intergenic | 35.0% |
| ! | TACACCTCTAGCATCAATTT+TGG | + | chr3.3:10674610-10674629 | None:intergenic | 35.0% |
| ! | TCAATGGAAGAATTCGGTTT+TGG | + | chr3.3:10673157-10673176 | None:intergenic | 35.0% |
| !!! | TAAGCATGGAATTGGTCTTT+TGG | - | chr3.3:10674517-10674536 | MS.gene039700:intron | 35.0% |
| !!! | TTTTGCCTCTGGCTTTAAAT+GGG | + | chr3.3:10673855-10673874 | None:intergenic | 35.0% |
| AACATCAGGTCTTCAAGTCT+TGG | - | chr3.3:10672846-10672865 | MS.gene039700:intron | 40.0% | |
| AGATTGTCTAACCTTTCCTG+TGG | + | chr3.3:10672023-10672042 | None:intergenic | 40.0% | |
| AGGAGAGATAAACCACACTA+AGG | + | chr3.3:10672631-10672650 | None:intergenic | 40.0% | |
| AGGCTACAAAATGTTGAGAG+AGG | - | chr3.3:10674927-10674946 | MS.gene039700:intron | 40.0% | |
| AGTCAATGCAGCTTGGAAAA+TGG | - | chr3.3:10674823-10674842 | MS.gene039700:intron | 40.0% | |
| CCAAGAGAAAGGATGACATA+AGG | + | chr3.3:10674262-10674281 | None:intergenic | 40.0% | |
| CCCTATTTACTGTTATAGGC+AGG | - | chr3.3:10674154-10674173 | MS.gene039700:intron | 40.0% | |
| CCTAGGAGTCCATATATCTA+AGG | - | chr3.3:10672908-10672927 | MS.gene039700:intron | 40.0% | |
| CCTTAGATATATGGACTCCT+AGG | + | chr3.3:10672911-10672930 | None:intergenic | 40.0% | |
| CCTTATGTCATCCTTTCTCT+TGG | - | chr3.3:10674259-10674278 | MS.gene039700:intron | 40.0% | |
| CTATCATTTCGAAACAGCTG+GGG | - | chr3.3:10673488-10673507 | MS.gene039700:CDS | 40.0% | |
| GCAGGTATGGTTGAATTTGT+TGG | - | chr3.3:10674172-10674191 | MS.gene039700:intron | 40.0% | |
| GCTATCATTTCGAAACAGCT+GGG | - | chr3.3:10673487-10673506 | MS.gene039700:CDS | 40.0% | |
| GCTCTTAGTAACATTGTCCT+CGG | - | chr3.3:10672662-10672681 | MS.gene039700:CDS | 40.0% | |
| GGAGAGATAAACCACACTAA+GGG | + | chr3.3:10672630-10672649 | None:intergenic | 40.0% | |
| GGGACAAATCAAATTCTCCT+CGG | + | chr3.3:10673354-10673373 | None:intergenic | 40.0% | |
| GTCAATGCAGCTTGGAAAAT+GGG | - | chr3.3:10674824-10674843 | MS.gene039700:intron | 40.0% | |
| GTGACATGAAAACACTCACT+TGG | + | chr3.3:10674288-10674307 | None:intergenic | 40.0% | |
| GTTTGCGTTCGATTTCTTTC+TGG | - | chr3.3:10674647-10674666 | MS.gene039700:intron | 40.0% | |
| TCTGGTATACATAGAAGCCT+AGG | - | chr3.3:10672891-10672910 | MS.gene039700:intron | 40.0% | |
| TGAGAAGCTAAAGATGCCTT+AGG | - | chr3.3:10672252-10672271 | MS.gene039700:intron | 40.0% | |
| TGAGACAGGAAATCTCATTG+AGG | - | chr3.3:10674907-10674926 | MS.gene039700:intron | 40.0% | |
| TGAGCCAAAATTGATGCTAG+AGG | - | chr3.3:10674603-10674622 | MS.gene039700:intron | 40.0% | |
| TGGATCATCAGAGCCAAAAT+GGG | - | chr3.3:10672079-10672098 | MS.gene039700:CDS | 40.0% | |
| TTGTGGAGGATTGTAGTTTG+AGG | + | chr3.3:10673423-10673442 | None:intergenic | 40.0% | |
| ! | AAAACTCGGTATCTAGCTCA+AGG | - | chr3.3:10673784-10673803 | MS.gene039700:CDS | 40.0% |
| ! | AACATATAGGGTTTTGCCTC+TGG | + | chr3.3:10673866-10673885 | None:intergenic | 40.0% |
| ! | AGACGAACAAGTCGATTCAT+TGG | - | chr3.3:10673063-10673082 | MS.gene039700:intron | 40.0% |
| ! | AGTCGATTCATTGGTCAACT+TGG | - | chr3.3:10673072-10673091 | MS.gene039700:intron | 40.0% |
| ! | GCTTTTGCTGCTGATACTAA+TGG | + | chr3.3:10674780-10674799 | None:intergenic | 40.0% |
| ! | GTCGATTCATTGGTCAACTT+GGG | - | chr3.3:10673073-10673092 | MS.gene039700:intron | 40.0% |
| ! | TTGCAGCTCATATTTTCTCC+TGG | + | chr3.3:10673318-10673337 | None:intergenic | 40.0% |
| !! | AACAAGTTCTGTGCTGATTG+TGG | - | chr3.3:10672059-10672078 | MS.gene039700:CDS | 40.0% |
| !! | ACTAAGAGCACCTTACAAGT+AGG | + | chr3.3:10672651-10672670 | None:intergenic | 40.0% |
| !! | GATTGGTCTCTCGAATTAGT+CGG | + | chr3.3:10673811-10673830 | None:intergenic | 40.0% |
| !! | GCAACAATTTTTGGATTCCG+AGG | - | chr3.3:10673334-10673353 | MS.gene039700:CDS | 40.0% |
| !! | TTTGCCTCTGGCTTTAAATG+GGG | + | chr3.3:10673854-10673873 | None:intergenic | 40.0% |
| !!! | AGGAGCGCTCTGATTTTATT+AGG | - | chr3.3:10673176-10673195 | MS.gene039700:intron | 40.0% |
| !!! | GTTTTGCCTCTGGCTTTAAA+TGG | + | chr3.3:10673856-10673875 | None:intergenic | 40.0% |
| AACCACACTAAGGGACTGTT+TGG | + | chr3.3:10672621-10672640 | None:intergenic | 45.0% | |
| AATCTGACTGTCCTCTAGCA+GGG | - | chr3.3:10673827-10673846 | MS.gene039700:intron | 45.0% | |
| ACAATCTGATGCGTCAAGCA+GGG | - | chr3.3:10672036-10672055 | MS.gene039700:CDS | 45.0% | |
| ATCATGGAGTCAATGCAGCT+TGG | - | chr3.3:10674816-10674835 | MS.gene039700:CDS | 45.0% | |
| ATCCAAACAGTCCCTTAGTG+TGG | - | chr3.3:10672616-10672635 | MS.gene039700:CDS | 45.0% | |
| CAGCGCATTGTTTGAACATC+AGG | - | chr3.3:10672832-10672851 | MS.gene039700:intron | 45.0% | |
| CGCTCCTCAATGGAAGAATT+CGG | + | chr3.3:10673163-10673182 | None:intergenic | 45.0% | |
| CTTGCGTGGGATGGTATAAA+GGG | + | chr3.3:10673374-10673393 | None:intergenic | 45.0% | |
| CTTGGAAAATGGGTAGCAAG+TGG | - | chr3.3:10674834-10674853 | MS.gene039700:intron | 45.0% | |
| CTTGTGAGACCGGATAATGT+TGG | + | chr3.3:10671916-10671935 | None:intergenic | 45.0% | |
| GATTCATTGGTCAACTTGGG+TGG | - | chr3.3:10673076-10673095 | MS.gene039700:intron | 45.0% | |
| GGATGAAGTTGTTCTTGCGT+GGG | + | chr3.3:10673387-10673406 | None:intergenic | 45.0% | |
| GGCTATCATTTCGAAACAGC+TGG | - | chr3.3:10673486-10673505 | MS.gene039700:CDS | 45.0% | |
| GTGGATCATCAGAGCCAAAA+TGG | - | chr3.3:10672078-10672097 | MS.gene039700:CDS | 45.0% | |
| TAAGAGGAGGGATGTTCTCA+GGG | + | chr3.3:10674446-10674465 | None:intergenic | 45.0% | |
| TACTGGCATTAGCACTTGTG+AGG | + | chr3.3:10672577-10672596 | None:intergenic | 45.0% | |
| TCTCAGGGATTGACAGCATT+AGG | + | chr3.3:10674431-10674450 | None:intergenic | 45.0% | |
| TCTGCTTACTTCCGATCACT+AGG | - | chr3.3:10671996-10672015 | MS.gene039700:CDS | 45.0% | |
| TCTTGCGTGGGATGGTATAA+AGG | + | chr3.3:10673375-10673394 | None:intergenic | 45.0% | |
| TGAAGAAGGGAAAGTGAGAC+AGG | - | chr3.3:10674893-10674912 | MS.gene039700:intron | 45.0% | |
| TGGATGAAGTTGTTCTTGCG+TGG | + | chr3.3:10673388-10673407 | None:intergenic | 45.0% | |
| TTAAGAGGAGGGATGTTCTC+AGG | + | chr3.3:10674447-10674466 | None:intergenic | 45.0% | |
| TTTCCTGTGGACCTAGTGAT+CGG | + | chr3.3:10672010-10672029 | None:intergenic | 45.0% | |
| ! | AAAATCAGAGCGCTCCTCAA+TGG | + | chr3.3:10673173-10673192 | None:intergenic | 45.0% |
| ! | TCACTTGGTGACCAAGAGAA+AGG | + | chr3.3:10674273-10674292 | None:intergenic | 45.0% |
| !! | AGAAAAAAAAAAAAAAAATA+GGG | - | chr3.3:10674003-10674022 | MS.gene039700:intron | 5.0% |
| ATCTGACTGTCCTCTAGCAG+GGG | - | chr3.3:10673828-10673847 | MS.gene039700:intron | 50.0% | |
| CAATCTGACTGTCCTCTAGC+AGG | - | chr3.3:10673826-10673845 | MS.gene039700:intron | 50.0% | |
| CTGCTAGAGGACAGTCAGAT+TGG | + | chr3.3:10673828-10673847 | None:intergenic | 50.0% | |
| GAAGTTGTTCTTGCGTGGGA+TGG | + | chr3.3:10673383-10673402 | None:intergenic | 50.0% | |
| GACAATCTGATGCGTCAAGC+AGG | - | chr3.3:10672035-10672054 | MS.gene039700:CDS | 50.0% | |
| GATCACTAGGTCCACAGGAA+AGG | - | chr3.3:10672009-10672028 | MS.gene039700:CDS | 50.0% | |
| GTTTGAGGAACTGCTCTGAC+TGG | + | chr3.3:10673408-10673427 | None:intergenic | 50.0% | |
| CTTCCGATCACTAGGTCCAC+AGG | - | chr3.3:10672004-10672023 | MS.gene039700:CDS | 55.0% | |
| TTAAATGGGGCCCCTGCTAG+AGG | + | chr3.3:10673841-10673860 | None:intergenic | 55.0% | |
| ! | GGGGCCCCATTTAAAGCCAG+AGG | - | chr3.3:10673847-10673866 | MS.gene039700:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 10671866 | 10674992 | 10671866 | ID=MS.gene039700 |
| chr3.3 | mRNA | 10671866 | 10674992 | 10671866 | ID=MS.gene039700.t1;Parent=MS.gene039700 |
| chr3.3 | exon | 10674983 | 10674992 | 10674983 | ID=MS.gene039700.t1.exon1;Parent=MS.gene039700.t1 |
| chr3.3 | CDS | 10674983 | 10674992 | 10674983 | ID=cds.MS.gene039700.t1;Parent=MS.gene039700.t1 |
| chr3.3 | exon | 10674756 | 10674840 | 10674756 | ID=MS.gene039700.t1.exon2;Parent=MS.gene039700.t1 |
| chr3.3 | CDS | 10674756 | 10674840 | 10674756 | ID=cds.MS.gene039700.t1;Parent=MS.gene039700.t1 |
| chr3.3 | exon | 10673929 | 10674004 | 10673929 | ID=MS.gene039700.t1.exon3;Parent=MS.gene039700.t1 |
| chr3.3 | CDS | 10673929 | 10674004 | 10673929 | ID=cds.MS.gene039700.t1;Parent=MS.gene039700.t1 |
| chr3.3 | exon | 10673661 | 10673824 | 10673661 | ID=MS.gene039700.t1.exon4;Parent=MS.gene039700.t1 |
| chr3.3 | CDS | 10673661 | 10673824 | 10673661 | ID=cds.MS.gene039700.t1;Parent=MS.gene039700.t1 |
| chr3.3 | exon | 10673302 | 10673539 | 10673302 | ID=MS.gene039700.t1.exon5;Parent=MS.gene039700.t1 |
| chr3.3 | CDS | 10673302 | 10673539 | 10673302 | ID=cds.MS.gene039700.t1;Parent=MS.gene039700.t1 |
| chr3.3 | exon | 10672570 | 10672686 | 10672570 | ID=MS.gene039700.t1.exon6;Parent=MS.gene039700.t1 |
| chr3.3 | CDS | 10672570 | 10672686 | 10672570 | ID=cds.MS.gene039700.t1;Parent=MS.gene039700.t1 |
| chr3.3 | exon | 10672388 | 10672483 | 10672388 | ID=MS.gene039700.t1.exon7;Parent=MS.gene039700.t1 |
| chr3.3 | CDS | 10672388 | 10672483 | 10672388 | ID=cds.MS.gene039700.t1;Parent=MS.gene039700.t1 |
| chr3.3 | exon | 10671866 | 10672147 | 10671866 | ID=MS.gene039700.t1.exon8;Parent=MS.gene039700.t1 |
| chr3.3 | CDS | 10671866 | 10672147 | 10671866 | ID=cds.MS.gene039700.t1;Parent=MS.gene039700.t1 |
| Gene Sequence |
| Protein sequence |
