Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040570.t1 | XP_003596186.1 | 99.4 | 843 | 5 | 0 | 1 | 843 | 1 | 843 | 0.00E+00 | 1692.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040570.t1 | Q9ASR1 | 93.2 | 843 | 57 | 0 | 1 | 843 | 1 | 843 | 0.0e+00 | 1606.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040570.t1 | G7IH33 | 99.4 | 843 | 5 | 0 | 1 | 843 | 1 | 843 | 0.0e+00 | 1692.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055714 | MS.gene040570 | PPI |
| MS.gene040570 | MS.gene26537 | PPI |
| MS.gene040570 | MS.gene060216 | PPI |
| MS.gene036653 | MS.gene040570 | PPI |
| MS.gene58774 | MS.gene040570 | PPI |
| MS.gene040570 | MS.gene41890 | PPI |
| MS.gene040570 | MS.gene058595 | PPI |
| MS.gene068078 | MS.gene040570 | PPI |
| MS.gene040570 | MS.gene008760 | PPI |
| MS.gene040570 | MS.gene63721 | PPI |
| MS.gene015588 | MS.gene040570 | PPI |
| MS.gene041404 | MS.gene040570 | PPI |
| MS.gene040570 | MS.gene62623 | PPI |
| MS.gene040570 | MS.gene039110 | PPI |
| MS.gene063366 | MS.gene040570 | PPI |
| MS.gene040570 | MS.gene040156 | PPI |
| MS.gene040570 | MS.gene81858 | PPI |
| MS.gene040570 | MS.gene39618 | PPI |
| MS.gene066163 | MS.gene040570 | PPI |
| MS.gene040570 | MS.gene068080 | PPI |
| MS.gene040581 | MS.gene040570 | PPI |
| MS.gene040570 | MS.gene41888 | PPI |
| MS.gene59979 | MS.gene040570 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040570.t1 | MTR_2g069310 | 99.407 | 843 | 5 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1750 |
| MS.gene040570.t1 | MTR_2g069050 | 99.288 | 843 | 6 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1748 |
| MS.gene040570.t1 | MTR_1g048000 | 97.746 | 843 | 19 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1730 |
| MS.gene040570.t1 | MTR_2g069320 | 86.595 | 843 | 113 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1538 |
| MS.gene040570.t1 | MTR_4g116430 | 39.379 | 838 | 471 | 10 | 20 | 834 | 140 | 963 | 0.0 | 627 |
| MS.gene040570.t1 | MTR_4g119340 | 29.724 | 1016 | 492 | 26 | 16 | 829 | 11 | 1006 | 1.01e-134 | 427 |
| MS.gene040570.t1 | MTR_7g009740 | 40.972 | 144 | 83 | 2 | 19 | 162 | 67 | 208 | 7.64e-24 | 107 |
| MS.gene040570.t1 | MTR_3g097250 | 42.361 | 144 | 70 | 3 | 18 | 161 | 82 | 212 | 4.00e-22 | 102 |
| MS.gene040570.t1 | MTR_1g052535 | 38.854 | 157 | 79 | 3 | 6 | 162 | 70 | 209 | 8.30e-22 | 100 |
| MS.gene040570.t1 | MTR_1g052535 | 39.103 | 156 | 78 | 3 | 7 | 162 | 71 | 209 | 2.22e-21 | 100 |
| MS.gene040570.t1 | MTR_4g079360 | 40.816 | 147 | 65 | 4 | 17 | 162 | 55 | 180 | 1.40e-20 | 97.4 |
| MS.gene040570.t1 | MTR_4g101750 | 25.577 | 477 | 261 | 16 | 332 | 793 | 353 | 750 | 1.43e-20 | 97.8 |
| MS.gene040570.t1 | MTR_4g101750 | 38.125 | 160 | 80 | 3 | 5 | 162 | 79 | 221 | 6.77e-17 | 85.9 |
| MS.gene040570.t1 | MTR_3g101820 | 93.617 | 47 | 3 | 0 | 472 | 518 | 19 | 65 | 2.04e-20 | 86.7 |
| MS.gene040570.t1 | MTR_7g044770 | 39.333 | 150 | 68 | 4 | 19 | 162 | 62 | 194 | 3.88e-17 | 86.7 |
| MS.gene040570.t1 | MTR_4g101750 | 38.125 | 160 | 80 | 3 | 5 | 162 | 79 | 221 | 5.65e-17 | 86.3 |
| MS.gene040570.t1 | MTR_4g101750 | 25.056 | 447 | 242 | 15 | 332 | 763 | 353 | 721 | 1.87e-16 | 84.3 |
| MS.gene040570.t1 | MTR_2g020660 | 35.762 | 151 | 72 | 4 | 19 | 162 | 55 | 187 | 2.45e-14 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040570.t1 | AT1G56070 | 93.238 | 843 | 57 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1661 |
| MS.gene040570.t1 | AT1G56070 | 93.238 | 843 | 57 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1661 |
| MS.gene040570.t1 | AT1G56070 | 93.238 | 843 | 57 | 0 | 1 | 843 | 1 | 843 | 0.0 | 1661 |
| MS.gene040570.t1 | AT3G12915 | 84.223 | 843 | 78 | 4 | 1 | 843 | 1 | 788 | 0.0 | 1457 |
| MS.gene040570.t1 | AT1G06220 | 37.972 | 848 | 489 | 11 | 19 | 843 | 138 | 971 | 0.0 | 608 |
| MS.gene040570.t1 | AT1G06220 | 37.972 | 848 | 489 | 11 | 19 | 843 | 138 | 971 | 0.0 | 608 |
| MS.gene040570.t1 | AT1G06220 | 37.972 | 848 | 489 | 11 | 19 | 843 | 138 | 971 | 0.0 | 608 |
| MS.gene040570.t1 | AT5G25230 | 37.544 | 847 | 494 | 9 | 19 | 843 | 124 | 957 | 0.0 | 599 |
| MS.gene040570.t1 | AT5G25230 | 37.544 | 847 | 494 | 9 | 19 | 843 | 124 | 957 | 0.0 | 599 |
| MS.gene040570.t1 | AT3G22980 | 30.792 | 1010 | 477 | 27 | 19 | 829 | 9 | 995 | 1.31e-141 | 445 |
| MS.gene040570.t1 | AT3G22980 | 30.792 | 1010 | 477 | 27 | 19 | 829 | 9 | 995 | 1.31e-141 | 445 |
| MS.gene040570.t1 | AT3G22980 | 30.792 | 1010 | 477 | 27 | 19 | 829 | 9 | 995 | 1.31e-141 | 445 |
| MS.gene040570.t1 | AT5G13650 | 39.216 | 153 | 77 | 1 | 10 | 162 | 73 | 209 | 8.36e-24 | 107 |
| MS.gene040570.t1 | AT5G13650 | 39.216 | 153 | 77 | 1 | 10 | 162 | 74 | 210 | 9.73e-24 | 107 |
| MS.gene040570.t1 | AT5G39900 | 41.667 | 144 | 76 | 2 | 19 | 162 | 66 | 201 | 2.65e-23 | 106 |
| MS.gene040570.t1 | AT1G62750 | 26.022 | 465 | 274 | 15 | 332 | 793 | 357 | 754 | 7.61e-22 | 102 |
| MS.gene040570.t1 | AT1G62750 | 37.838 | 148 | 74 | 2 | 18 | 163 | 95 | 226 | 7.13e-16 | 82.8 |
| MS.gene040570.t1 | AT5G08650 | 40.278 | 144 | 73 | 2 | 18 | 161 | 85 | 215 | 4.78e-21 | 99.0 |
| MS.gene040570.t1 | AT5G08650 | 40.972 | 144 | 72 | 2 | 18 | 161 | 85 | 215 | 6.31e-21 | 98.6 |
| MS.gene040570.t1 | AT2G31060 | 39.456 | 147 | 67 | 3 | 17 | 162 | 57 | 182 | 7.39e-21 | 98.6 |
| MS.gene040570.t1 | AT2G31060 | 39.456 | 147 | 71 | 3 | 17 | 162 | 57 | 186 | 3.61e-19 | 93.2 |
| MS.gene040570.t1 | AT2G45030 | 23.077 | 481 | 266 | 18 | 332 | 793 | 328 | 723 | 4.49e-18 | 89.7 |
| MS.gene040570.t1 | AT2G45030 | 37.333 | 150 | 71 | 4 | 19 | 162 | 65 | 197 | 2.64e-16 | 84.0 |
| MS.gene040570.t1 | AT1G45332 | 23.077 | 481 | 266 | 18 | 332 | 793 | 148 | 543 | 4.65e-18 | 89.4 |
| MS.gene040570.t1 | AT1G45332 | 23.077 | 481 | 266 | 18 | 332 | 793 | 328 | 723 | 6.34e-18 | 89.4 |
| MS.gene040570.t1 | AT1G45332 | 37.333 | 150 | 71 | 4 | 19 | 162 | 65 | 197 | 3.00e-16 | 84.0 |
Find 239 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTTGAAGGTCAGAATTA+TGG | 0.222732 | 2.3:-26774225 | MS.gene040570:CDS |
| ATTTGTCAATGTAGCATTCT+TGG | 0.226304 | 2.3:+26774055 | None:intergenic |
| TTCTCCCCAGGGACAAAATT+TGG | 0.227493 | 2.3:+26774200 | None:intergenic |
| CTCTGCTGGTTTGCATGGTT+GGG | 0.249595 | 2.3:-26774807 | MS.gene040570:CDS |
| GTGTTCAGAGAACTGTTATT+TGG | 0.270470 | 2.3:-26774157 | MS.gene040570:CDS |
| CTTCCTGTCATTGAGTCCTT+TGG | 0.273842 | 2.3:-26773123 | MS.gene040570:CDS |
| GCCAAGAAAATCTGGTGTTT+TGG | 0.299094 | 2.3:-26773549 | MS.gene040570:CDS |
| CAAAGATGATGGAGAGGCTT+TGG | 0.317773 | 2.3:-26774727 | MS.gene040570:CDS |
| TCTCTGCTGGTTTGCATGGT+TGG | 0.318008 | 2.3:-26774808 | MS.gene040570:CDS |
| CTGATGTTGCGGCCCTCAAC+TGG | 0.321497 | 2.3:+26773091 | None:intergenic |
| ATGATTCCCGCTTCTGATAA+AGG | 0.326143 | 2.3:-26774293 | MS.gene040570:CDS |
| AAGATGTATGCCTCTAAATT+TGG | 0.328168 | 2.3:-26774761 | MS.gene040570:CDS |
| CAAGATCTTAGAACGATTCT+TGG | 0.331449 | 2.3:+26773602 | None:intergenic |
| CCTTGATTTCATTCAAGTAT+TGG | 0.334928 | 2.3:+26773478 | None:intergenic |
| TGATGAGTTACGTCGGATTA+TGG | 0.346228 | 2.3:-26776248 | MS.gene040570:CDS |
| CAGTTGAGGGCCGCAACATC+AGG | 0.346803 | 2.3:-26773090 | MS.gene040570:CDS |
| AAAGATGATGGAGAGGCTTT+GGG | 0.347711 | 2.3:-26774726 | MS.gene040570:CDS |
| GAAAATTTCATAGCACGAAT+AGG | 0.347893 | 2.3:+26774011 | None:intergenic |
| TAAAGCATGAGAGGTCCTTC+AGG | 0.357751 | 2.3:+26774326 | None:intergenic |
| GTGTTAATGACCTGCTTGAT+AGG | 0.360875 | 2.3:+26774608 | None:intergenic |
| CACAGTCGCTATGGTTGGTT+TGG | 0.369065 | 2.3:-26774090 | MS.gene040570:CDS |
| GGTTTGAAGGTCAGAATTAT+GGG | 0.370077 | 2.3:-26774224 | MS.gene040570:CDS |
| TCAAGAAGTGCAGTGCTTGC+GGG | 0.370597 | 2.3:+26774461 | None:intergenic |
| CTCAGTGTGTGTTTGATCAC+TGG | 0.371487 | 2.3:-26773056 | MS.gene040570:CDS |
| CAGATGCTTCCTTGAGCTCC+AGG | 0.374710 | 2.3:-26774957 | MS.gene040570:CDS |
| GATTCCCTTGTTGCTGCCGC+TGG | 0.379217 | 2.3:-26775331 | MS.gene040570:CDS |
| ATCAGAGGAAAAGGACTTGA+TGG | 0.385826 | 2.3:-26774522 | MS.gene040570:CDS |
| TACAATCTGTTGTGCTTGTT+GGG | 0.386039 | 2.3:+26773699 | None:intergenic |
| GTTTGTACTATTGAGGAGTC+TGG | 0.388255 | 2.3:-26773885 | MS.gene040570:CDS |
| GTAAACAGGTTCAAGAAGTC+TGG | 0.388286 | 2.3:+26773272 | None:intergenic |
| CTTGGTGGTCCATTTCTTAG+TGG | 0.388699 | 2.3:+26774682 | None:intergenic |
| GGCATACATCTTTGCAAAGT+TGG | 0.389166 | 2.3:+26774772 | None:intergenic |
| GGAACAGTTGCTTTCTCTGC+TGG | 0.392902 | 2.3:-26774821 | MS.gene040570:CDS |
| CTCGTCAACACCAAATTTAG+AGG | 0.393467 | 2.3:+26774751 | None:intergenic |
| TTCCTTGAGCTCCAGGTTGA+TGG | 0.393631 | 2.3:-26774950 | MS.gene040570:CDS |
| ATCAAGGATTCCGTGGTTGC+TGG | 0.395800 | 2.3:-26773462 | MS.gene040570:CDS |
| TGGATTTCCACCATGTAAAC+AGG | 0.397116 | 2.3:+26773258 | None:intergenic |
| AGGATCTTGCCAAGAAAATC+TGG | 0.397634 | 2.3:-26773557 | MS.gene040570:CDS |
| CTCTGTGGATAGCATCAGTA+TGG | 0.397725 | 2.3:+26773358 | None:intergenic |
| GTACAATCTGTTGTGCTTGT+TGG | 0.399465 | 2.3:+26773698 | None:intergenic |
| AAGATCTTGTCCGAACAGTA+TGG | 0.399948 | 2.3:-26773588 | MS.gene040570:CDS |
| GTGGTCCATTTCTTAGTGGC+AGG | 0.403123 | 2.3:+26774686 | None:intergenic |
| GTCTCTCTGAAGGACACAAC+AGG | 0.403756 | 2.3:+26773762 | None:intergenic |
| GATCTGTTTGAAGGATTTGC+AGG | 0.404040 | 2.3:-26773823 | MS.gene040570:CDS |
| AAGATCTTAGAACGATTCTT+GGG | 0.404757 | 2.3:+26773603 | None:intergenic |
| TAAAGTTTCAACTGGTTTGA+AGG | 0.404880 | 2.3:-26774237 | MS.gene040570:CDS |
| ATGTTGGGCCCGGTGGTCTC+AGG | 0.405338 | 2.3:+26773525 | None:intergenic |
| GCCCTTCCTCTTGCGAATAT+CGG | 0.410239 | 2.3:+26772978 | None:intergenic |
| TCATCTTGAGATCTGTTTGA+AGG | 0.410842 | 2.3:-26773832 | MS.gene040570:CDS |
| AGTAGCAGAACCAGTATTCT+TGG | 0.411397 | 2.3:+26774664 | None:intergenic |
| AAAGCAACTGTTCCTTTCTC+AGG | 0.414055 | 2.3:+26774830 | None:intergenic |
| CGATACCTCTGAGCTGTAGA+TGG | 0.417008 | 2.3:+26774413 | None:intergenic |
| AAAATTTCATAGCACGAATA+GGG | 0.417338 | 2.3:+26774012 | None:intergenic |
| CAAGAGCTTGCTCAGGAGCT+TGG | 0.418120 | 2.3:+26773238 | None:intergenic |
| TCCTATTGTGCCCTCATCAA+TGG | 0.419375 | 2.3:+26773638 | None:intergenic |
| GATCTTCCTAAGCTTGTTGA+AGG | 0.426334 | 2.3:-26773942 | MS.gene040570:CDS |
| TCGATCCTGCCACTAAGAAA+TGG | 0.426622 | 2.3:-26774691 | MS.gene040570:CDS |
| AAATGGACCACCAAGAATAC+TGG | 0.427003 | 2.3:-26774674 | MS.gene040570:CDS |
| TATGGTTGTTTGTACTATTG+AGG | 0.430770 | 2.3:-26773892 | MS.gene040570:CDS |
| GCCATTGATGAGGGCACAAT+AGG | 0.431150 | 2.3:-26773639 | MS.gene040570:CDS |
| CACATATCAACCACCATGTT+GGG | 0.432084 | 2.3:+26773510 | None:intergenic |
| ACTGTGCTCCGACAGGCTCT+TGG | 0.432422 | 2.3:-26775019 | MS.gene040570:CDS |
| GGATTTGCAGGATGATTTCA+TGG | 0.433382 | 2.3:-26773811 | MS.gene040570:CDS |
| ATTAATCTTATTGATTCCCC+TGG | 0.433729 | 2.3:-26775142 | MS.gene040570:CDS |
| TGGATTCTCCAGCCAGTTGA+GGG | 0.437780 | 2.3:-26773103 | MS.gene040570:CDS |
| TCGTGTTGAGAATTTGTATG+AGG | 0.438674 | 2.3:-26774393 | MS.gene040570:CDS |
| GCTTTCTCTGCTGGTTTGCA+TGG | 0.439579 | 2.3:-26774812 | MS.gene040570:CDS |
| CGATTCTTGGGGTCATCCCT+TGG | 0.448562 | 2.3:+26773615 | None:intergenic |
| ATCACATACTTCAAAGCAAA+TGG | 0.448606 | 2.3:+26773389 | None:intergenic |
| CACTATGAAATCAGAGGAAA+AGG | 0.455048 | 2.3:-26774531 | MS.gene040570:CDS |
| TGGCCGATGCTGACAAAGCT+AGG | 0.455091 | 2.3:-26774557 | MS.gene040570:CDS |
| ATTATAGCGCAAGAGGTTGC+TGG | 0.455122 | 2.3:-26775307 | MS.gene040570:CDS |
| ACTTCTTGAACCTGTTTACA+TGG | 0.457137 | 2.3:-26773268 | MS.gene040570:CDS |
| TTGAGACCTTCAACAAGCTT+AGG | 0.465806 | 2.3:+26773936 | None:intergenic |
| GTTATTGCTCATGTTGATCA+TGG | 0.469786 | 2.3:-26776196 | MS.gene040570:intron |
| CCAATACTTGAATGAAATCA+AGG | 0.470676 | 2.3:-26773478 | MS.gene040570:CDS |
| GATGAGAAATCGACGTGCCC+AGG | 0.471364 | 2.3:+26775124 | None:intergenic |
| TCGCAAGAGGAAGGGCTTGA+AGG | 0.471559 | 2.3:-26772971 | MS.gene040570:CDS |
| CAGAGAACTGTTATTTGGAT+GGG | 0.472670 | 2.3:-26774152 | MS.gene040570:CDS |
| TACAAATCTTTCTTCTCCCC+AGG | 0.474730 | 2.3:+26774188 | None:intergenic |
| AACCTTCCTTTATCAGAAGC+GGG | 0.475056 | 2.3:+26774287 | None:intergenic |
| AGGTTCAAGAAGTCTGGGTT+TGG | 0.477724 | 2.3:+26773278 | None:intergenic |
| CAAGCTCCTGAGCAAGCTCT+TGG | 0.480687 | 2.3:-26773237 | MS.gene040570:CDS |
| TGTTGCGGCCCTCAACTGGC+TGG | 0.484331 | 2.3:+26773095 | None:intergenic |
| CTCCATCAACCTGGAGCTCA+AGG | 0.484716 | 2.3:+26774948 | None:intergenic |
| AGGCTCTTGGAGAAAGGATC+AGG | 0.488174 | 2.3:-26775006 | MS.gene040570:CDS |
| TTGGATTCTCCAGCCAGTTG+AGG | 0.488915 | 2.3:-26773104 | MS.gene040570:CDS |
| ATCTTGTTAACTGTCAGAAC+CGG | 0.491014 | 2.3:+26774983 | None:intergenic |
| TCAGAGAACTGTTATTTGGA+TGG | 0.493880 | 2.3:-26774153 | MS.gene040570:CDS |
| TCTGGAGAACACATTGTTGC+TGG | 0.495917 | 2.3:-26773867 | MS.gene040570:CDS |
| TATGATGTCATCAGATCCAT+TGG | 0.496991 | 2.3:-26773031 | MS.gene040570:CDS |
| TCTTGCTAAGTCAGATCCTA+TGG | 0.502729 | 2.3:-26773910 | MS.gene040570:CDS |
| TTCAAGAAGTGCAGTGCTTG+CGG | 0.504272 | 2.3:+26774460 | None:intergenic |
| CATGGTGGTTGATATGTGTA+AGG | 0.508997 | 2.3:-26773505 | MS.gene040570:CDS |
| ATCAACCACCATGTTGGGCC+CGG | 0.509336 | 2.3:+26773515 | None:intergenic |
| TGAACAGCAACACGCACAAC+AGG | 0.510917 | 2.3:+26773981 | None:intergenic |
| GAAGCTAGACCGTTGGAGGA+TGG | 0.513136 | 2.3:-26773672 | MS.gene040570:CDS |
| TGCATGACACGTTTCATCAA+AGG | 0.514712 | 2.3:+26774494 | None:intergenic |
| CGGTAGCATATTGATCATCA+AGG | 0.515015 | 2.3:+26774366 | None:intergenic |
| TCCGACAGGCTCTTGGAGAA+AGG | 0.517683 | 2.3:-26775012 | MS.gene040570:CDS |
| GACTGAAACTGTGCTCCGAC+AGG | 0.517863 | 2.3:-26775026 | MS.gene040570:CDS |
| CTTGTCCGAACAGTATGGTT+GGG | 0.522890 | 2.3:-26773583 | MS.gene040570:CDS |
| CAAGCACAACAGATTGTACA+TGG | 0.523093 | 2.3:-26773694 | MS.gene040570:CDS |
| CTTGCAGAGGCCATTGATGA+GGG | 0.525668 | 2.3:-26773648 | MS.gene040570:CDS |
| GGTTCTGCTACTTGCAAGCG+TGG | 0.529459 | 2.3:-26774653 | MS.gene040570:CDS |
| GAGGGCCGCAACATCAGGGC+AGG | 0.529545 | 2.3:-26773085 | MS.gene040570:CDS |
| ATCCCTAGCTTTGTCAGCAT+CGG | 0.530973 | 2.3:+26774554 | None:intergenic |
| TAAACAGGTTCAAGAAGTCT+GGG | 0.532926 | 2.3:+26773273 | None:intergenic |
| AAGCTAGACCGTTGGAGGAT+GGG | 0.533264 | 2.3:-26773671 | MS.gene040570:CDS |
| GTGGTGGTGGATTGTGTCGA+AGG | 0.535297 | 2.3:-26775061 | MS.gene040570:CDS |
| GCGTGTTGCTGTTCAGTGCA+AGG | 0.535855 | 2.3:-26773973 | MS.gene040570:CDS |
| GAACACATTGTTGCTGGTGC+AGG | 0.536052 | 2.3:-26773861 | MS.gene040570:CDS |
| AAACCTTCCTTTATCAGAAG+CGG | 0.536092 | 2.3:+26774286 | None:intergenic |
| CTTGTCCCAACCATACTGTT+CGG | 0.536466 | 2.3:+26773578 | None:intergenic |
| GTTCAAGTGTATCCTGAGAA+AGG | 0.538260 | 2.3:-26774842 | MS.gene040570:CDS |
| TTCCAGTGGGCATCAAAAGA+AGG | 0.538881 | 2.3:-26773438 | MS.gene040570:CDS |
| TCAGTGTGTGTTTGATCACT+GGG | 0.540539 | 2.3:-26773055 | MS.gene040570:CDS |
| CGCTGGAATTATAGCGCAAG+AGG | 0.541380 | 2.3:-26775314 | MS.gene040570:CDS |
| GTGACTTACTCATCACAGTT+CGG | 0.541457 | 2.3:+26773721 | None:intergenic |
| TATGCTTTGATGTTGTAAAG+TGG | 0.541891 | 2.3:+26773147 | None:intergenic |
| ATGTTGTAAAGTGGAGTACC+AGG | 0.543082 | 2.3:+26773156 | None:intergenic |
| GATGCTATCCACAGAGGAGG+TGG | 0.545132 | 2.3:-26773351 | MS.gene040570:CDS |
| ACACATATCAACCACCATGT+TGG | 0.545736 | 2.3:+26773509 | None:intergenic |
| CTCTGAGCTGTAGATGGAGA+GGG | 0.546475 | 2.3:+26774419 | None:intergenic |
| TGAGAATGCTAATGTGATCA+TGG | 0.547006 | 2.3:-26774894 | MS.gene040570:CDS |
| TTAATCTTATTGATTCCCCT+GGG | 0.548229 | 2.3:-26775141 | MS.gene040570:CDS |
| AAAGCATGAGAGGTCCTTCA+GGG | 0.548432 | 2.3:+26774327 | None:intergenic |
| CAAGAAGTGCAGTGCTTGCG+GGG | 0.549171 | 2.3:+26774462 | None:intergenic |
| GCTCCTGAGCAAGCTCTTGG+TGG | 0.549556 | 2.3:-26773234 | MS.gene040570:CDS |
| TTGCAGGATGATTTCATGGG+TGG | 0.550585 | 2.3:-26773807 | MS.gene040570:CDS |
| CTTATCTTCAAACTCGGAGA+GGG | 0.551141 | 2.3:+26772936 | None:intergenic |
| TCATCAGATCCATTGGAGGC+TGG | 0.551374 | 2.3:-26773024 | MS.gene040570:CDS |
| CCGTGGTTGCTGGATTCCAG+TGG | 0.552245 | 2.3:-26773452 | MS.gene040570:CDS |
| TTTGAAGAAATGCAGAGGCC+TGG | 0.554342 | 2.3:-26773174 | MS.gene040570:CDS |
| GCTTGTGATCCAGCCTCCAA+TGG | 0.555847 | 2.3:+26773015 | None:intergenic |
| TCTGCAAGCCCATCCTCCAA+CGG | 0.557137 | 2.3:+26773663 | None:intergenic |
| TAATTCCAGCGGCAGCAACA+AGG | 0.558273 | 2.3:+26775326 | None:intergenic |
| CACGTTCAGCTTCATCAGCA+CGG | 0.558462 | 2.3:+26775263 | None:intergenic |
| CATGGAAGCTAGACCGTTGG+AGG | 0.559366 | 2.3:-26773676 | MS.gene040570:CDS |
| GACCGATATTCGCAAGAGGA+AGG | 0.561820 | 2.3:-26772980 | MS.gene040570:CDS |
| ATGAGAAATCGACGTGCCCA+GGG | 0.562701 | 2.3:+26775125 | None:intergenic |
| TTCCCGCTTCTGATAAAGGA+AGG | 0.564010 | 2.3:-26774289 | MS.gene040570:CDS |
| AATCCAAAGGACTCAATGAC+AGG | 0.564068 | 2.3:+26773120 | None:intergenic |
| GCTGCACTTCGAATTACTGA+TGG | 0.565548 | 2.3:-26775091 | MS.gene040570:CDS |
| TCTTGTCCGAACAGTATGGT+TGG | 0.569952 | 2.3:-26773584 | MS.gene040570:CDS |
| TGGTGGTGGATTGTGTCGAA+GGG | 0.570704 | 2.3:-26775060 | MS.gene040570:CDS |
| CACTTGTATGAATGATCAGA+AGG | 0.573672 | 2.3:-26774588 | MS.gene040570:CDS |
| TCAATAGTACAAACAACCAT+AGG | 0.573953 | 2.3:+26773894 | None:intergenic |
| AATTCCAGCGGCAGCAACAA+GGG | 0.576681 | 2.3:+26775327 | None:intergenic |
| TCAGAGGAAAAGGACTTGAT+GGG | 0.576860 | 2.3:-26774521 | MS.gene040570:CDS |
| TTGTGGTAACACAGTCGCTA+TGG | 0.577802 | 2.3:-26774099 | MS.gene040570:CDS |
| CGTGGTTGCTGGATTCCAGT+GGG | 0.577990 | 2.3:-26773451 | MS.gene040570:CDS |
| TGATGGAGCACTAGTGGTGG+TGG | 0.578509 | 2.3:-26775074 | MS.gene040570:CDS |
| GAATGCCTGCCCTGATGTTG+CGG | 0.578889 | 2.3:+26773080 | None:intergenic |
| GGTAACACAGTCGCTATGGT+TGG | 0.579817 | 2.3:-26774095 | MS.gene040570:CDS |
| GATTTGCAGGATGATTTCAT+GGG | 0.581696 | 2.3:-26773810 | MS.gene040570:CDS |
| ATACCACCAAGAGCTTGCTC+AGG | 0.582185 | 2.3:+26773231 | None:intergenic |
| CTGTTATGAGCCTATCAAGC+AGG | 0.582616 | 2.3:-26774618 | MS.gene040570:CDS |
| TGCTACATTGACAAATGAGA+AGG | 0.584546 | 2.3:-26774048 | MS.gene040570:CDS |
| GCTTGCAGAGGCCATTGATG+AGG | 0.585873 | 2.3:-26773649 | MS.gene040570:CDS |
| TCCTTTCTCCAAGAGCCTGT+CGG | 0.585967 | 2.3:+26775011 | None:intergenic |
| AAGCCTCCTCTCCATCAACC+TGG | 0.586559 | 2.3:+26774939 | None:intergenic |
| ACCGATATTCGCAAGAGGAA+GGG | 0.586677 | 2.3:-26772979 | MS.gene040570:CDS |
| TTAAAGCTTATCTTCAAACT+CGG | 0.588371 | 2.3:+26772930 | None:intergenic |
| AGTTGAGGGCCGCAACATCA+GGG | 0.589707 | 2.3:-26773089 | MS.gene040570:CDS |
| CCTCTGAGCTGTAGATGGAG+AGG | 0.591651 | 2.3:+26774418 | None:intergenic |
| ACGTTCAGCTTCATCAGCAC+GGG | 0.591789 | 2.3:+26775264 | None:intergenic |
| GGTAGCATATTGATCATCAA+GGG | 0.593799 | 2.3:+26774367 | None:intergenic |
| CGAACAGTATGGTTGGGACA+AGG | 0.595072 | 2.3:-26773577 | MS.gene040570:CDS |
| AATTACTGATGGAGCACTAG+TGG | 0.597933 | 2.3:-26775080 | MS.gene040570:CDS |
| CGTGTTGAGAATTTGTATGA+GGG | 0.598437 | 2.3:-26774392 | MS.gene040570:CDS |
| CAAAGGACTCAATGACAGGA+AGG | 0.599886 | 2.3:+26773124 | None:intergenic |
| TGAGCTCCAGGTTGATGGAG+AGG | 0.602836 | 2.3:-26774945 | MS.gene040570:CDS |
| ACTTGAACATCACCGAGCAA+TGG | 0.603545 | 2.3:+26774857 | None:intergenic |
| AAGATGATGGAGAGGCTTTG+GGG | 0.604113 | 2.3:-26774725 | MS.gene040570:CDS |
| GGTATCACTATCAAGTCCAC+TGG | 0.604230 | 2.3:-26775241 | MS.gene040570:CDS |
| ATTCTCAATAACTCTCGAGA+AGG | 0.605206 | 2.3:+26774910 | None:intergenic |
| AGGGATCACTATGAAATCAG+AGG | 0.607637 | 2.3:-26774537 | MS.gene040570:CDS |
| TAGAAGACTCTCCTAGCAGT+AGG | 0.608055 | 2.3:+26773318 | None:intergenic |
| GGCCGATGCTGACAAAGCTA+GGG | 0.609182 | 2.3:-26774556 | MS.gene040570:CDS |
| CTCTAGAACAGTCTCTCTGA+AGG | 0.609943 | 2.3:+26773752 | None:intergenic |
| ACATATGAAGATCCATTGCT+CGG | 0.611867 | 2.3:-26774869 | MS.gene040570:CDS |
| GAATGAAATCAAGGATTCCG+TGG | 0.612773 | 2.3:-26773469 | MS.gene040570:CDS |
| GTTCTGCTACTTGCAAGCGT+GGG | 0.613722 | 2.3:-26774652 | MS.gene040570:CDS |
| GATGTCATCAGATCCATTGG+AGG | 0.614733 | 2.3:-26773028 | MS.gene040570:CDS |
| TCTTGAACCTGTTTACATGG+TGG | 0.615519 | 2.3:-26773265 | MS.gene040570:CDS |
| TGTTGACGAGACAAAGATGA+TGG | 0.617389 | 2.3:-26774738 | MS.gene040570:CDS |
| TCGAAGTGCAGCAGTAACCT+CGG | 0.626299 | 2.3:+26775102 | None:intergenic |
| CTCTTGCGCTATAATTCCAG+CGG | 0.626393 | 2.3:+26775315 | None:intergenic |
| GTTGGAGGATGGGCTTGCAG+AGG | 0.626552 | 2.3:-26773661 | MS.gene040570:CDS |
| AGGGTCACAGTTTCTGATAG+CGG | 0.627247 | 2.3:+26774346 | None:intergenic |
| AACCACCATGTTGGGCCCGG+TGG | 0.628249 | 2.3:+26773518 | None:intergenic |
| TTTGACACATAAAGCATGAG+AGG | 0.628659 | 2.3:+26774317 | None:intergenic |
| TCTGAAGGACACAACAGGGT+CGG | 0.628668 | 2.3:+26773767 | None:intergenic |
| TGAGACCACCGGGCCCAACA+TGG | 0.629138 | 2.3:-26773523 | MS.gene040570:CDS |
| AGCAGAACCAGTATTCTTGG+TGG | 0.629458 | 2.3:+26774667 | None:intergenic |
| GTACATGGAAGCTAGACCGT+TGG | 0.629595 | 2.3:-26773679 | MS.gene040570:CDS |
| GCTCCAGGTTGATGGAGAGG+AGG | 0.629905 | 2.3:-26774942 | MS.gene040570:CDS |
| CCACTGGAATCCAGCAACCA+CGG | 0.634741 | 2.3:+26773452 | None:intergenic |
| GGTGGTGGATTGTGTCGAAG+GGG | 0.636411 | 2.3:-26775059 | MS.gene040570:CDS |
| ATCAGAAACTGTGACCCTGA+AGG | 0.637113 | 2.3:-26774341 | MS.gene040570:CDS |
| GGTTCTGACAGTTAACAAGA+TGG | 0.637494 | 2.3:-26774981 | MS.gene040570:CDS |
| ACGAGACAAAGATGATGGAG+AGG | 0.640462 | 2.3:-26774733 | MS.gene040570:CDS |
| TGTGGATAGCATCAGTATGG+AGG | 0.641089 | 2.3:+26773361 | None:intergenic |
| ACAAATCTTTCTTCTCCCCA+GGG | 0.641869 | 2.3:+26774189 | None:intergenic |
| TCTTGGAGAAAGGATCAGGC+CGG | 0.642624 | 2.3:-26775002 | MS.gene040570:CDS |
| GTCAGATCATTCCTACTGCT+AGG | 0.642716 | 2.3:-26773329 | MS.gene040570:CDS |
| TGATCTGACCACCTCCTCTG+TGG | 0.643725 | 2.3:+26773343 | None:intergenic |
| TCTCTCTGAAGGACACAACA+GGG | 0.645685 | 2.3:+26773763 | None:intergenic |
| GCACGTCGATTTCTCATCCG+AGG | 0.650068 | 2.3:-26775119 | MS.gene040570:CDS |
| TGAAACGTGTCATGCAGACA+TGG | 0.650889 | 2.3:-26774487 | MS.gene040570:CDS |
| ATGAGGGCACAATAGGACCA+AGG | 0.652106 | 2.3:-26773632 | MS.gene040570:CDS |
| AGTGTTCTTAATCAGAAGCG+TGG | 0.654359 | 2.3:-26773204 | MS.gene040570:CDS |
| TTGTGACCGATATTCGCAAG+AGG | 0.654765 | 2.3:-26772984 | MS.gene040570:CDS |
| GCTTATCTTCAAACTCGGAG+AGG | 0.659013 | 2.3:+26772935 | None:intergenic |
| TGAGGGCACAATAGGACCAA+GGG | 0.659043 | 2.3:-26773631 | MS.gene040570:CDS |
| AGTGATCAAACACACACTGA+GGG | 0.666361 | 2.3:+26773058 | None:intergenic |
| TTATCTTCAAACTCGGAGAG+GGG | 0.667755 | 2.3:+26772937 | None:intergenic |
| TCTGAGCTGTAGATGGAGAG+GGG | 0.671992 | 2.3:+26774420 | None:intergenic |
| AGATCTTAGAACGATTCTTG+GGG | 0.672368 | 2.3:+26773604 | None:intergenic |
| ATGTCTTTGAAGAAATGCAG+AGG | 0.672505 | 2.3:-26773179 | MS.gene040570:CDS |
| TTACAGCTGATGAGTTACGT+CGG | 0.677455 | 2.3:-26776255 | MS.gene040570:CDS |
| GACCACCGGGCCCAACATGG+TGG | 0.678120 | 2.3:-26773520 | MS.gene040570:CDS |
| ACTGATGCTATCCACAGAGG+AGG | 0.678477 | 2.3:-26773354 | MS.gene040570:CDS |
| ATGATCAGAAGGATAAGTTG+TGG | 0.678564 | 2.3:-26774577 | MS.gene040570:CDS |
| GGGTTTGGCAGTCAGCTGTG+AGG | 0.683722 | 2.3:+26773293 | None:intergenic |
| CCTCTCCATCTACAGCTCAG+AGG | 0.688379 | 2.3:-26774418 | MS.gene040570:CDS |
| GTAGCATATTGATCATCAAG+GGG | 0.693284 | 2.3:+26774368 | None:intergenic |
| ATAGTATAAAGAGATACCAG+TGG | 0.698934 | 2.3:+26775225 | None:intergenic |
| AAAGAGACAAGAAACTGTTG+AGG | 0.699510 | 2.3:-26774129 | MS.gene040570:CDS |
| ATGGTGGTTGATATGTGTAA+GGG | 0.703374 | 2.3:-26773504 | MS.gene040570:CDS |
| CAACTGGCTGGAGAATCCAA+AGG | 0.706369 | 2.3:+26773107 | None:intergenic |
| ATAGCGACTGTGTTACCACA+AGG | 0.708586 | 2.3:+26774101 | None:intergenic |
| TACTGATGGAGCACTAGTGG+TGG | 0.711986 | 2.3:-26775077 | MS.gene040570:CDS |
| CAGTGATCAAACACACACTG+AGG | 0.714442 | 2.3:+26773057 | None:intergenic |
| CGTGCTGATGAAGCTGAACG+TGG | 0.724162 | 2.3:-26775262 | MS.gene040570:CDS |
| TGAGAAATCGACGTGCCCAG+GGG | 0.739636 | 2.3:+26775126 | None:intergenic |
| CATACTGATGCTATCCACAG+AGG | 0.768602 | 2.3:-26773357 | MS.gene040570:CDS |
| ACTGTTGAGGACGTGCCTTG+TGG | 0.777453 | 2.3:-26774116 | MS.gene040570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATTTAATTTAGGAATA+AGG | - | chr2.3:26773507-26773526 | MS.gene040570:CDS | 10.0% |
| !!! | TTGTATTTTATTTTAATGTT+TGG | - | chr2.3:26773312-26773331 | MS.gene040570:CDS | 10.0% |
| !! | CATAAAAAGTTTACAAAATA+AGG | + | chr2.3:26773665-26773684 | None:intergenic | 15.0% |
| !! | TTGAAGATGTTAATAATATT+TGG | - | chr2.3:26773341-26773360 | MS.gene040570:CDS | 15.0% |
| !!! | CTTTTATGAAAAGTATAATA+AGG | - | chr2.3:26773696-26773715 | MS.gene040570:CDS | 15.0% |
| !!! | GTAAACTTTTTATGAAAAAT+AGG | - | chr2.3:26773671-26773690 | MS.gene040570:CDS | 15.0% |
| !!! | TTATTTTCATTTCATAAACT+AGG | + | chr2.3:26773492-26773511 | None:intergenic | 15.0% |
| !! | AATATTAGTGGCATAATTTA+TGG | - | chr2.3:26773284-26773303 | MS.gene040570:CDS | 20.0% |
| !! | ACAGTGAATACAATTTATTA+AGG | + | chr2.3:26773638-26773657 | None:intergenic | 20.0% |
| !! | GTTTGTAAAGAAAATATTAG+TGG | - | chr2.3:26773272-26773291 | MS.gene040570:CDS | 20.0% |
| !!! | AAGTTTTTTTTTATCCAAAC+AGG | - | chr2.3:26773610-26773629 | MS.gene040570:CDS | 20.0% |
| !!! | GATTATTGTTTTGAAATTGT+AGG | - | chr2.3:26773915-26773934 | MS.gene040570:CDS | 20.0% |
| !!! | TATTGATTTGTTTTTGTGTT+TGG | - | chr2.3:26772992-26773011 | MS.gene040570:CDS | 20.0% |
| ! | AAAATTTCATAGCACGAATA+GGG | + | chr2.3:26775276-26775295 | None:intergenic | 25.0% |
| ! | AAAGTGGATGCAATTTATTT+AGG | - | chr2.3:26773723-26773742 | MS.gene040570:CDS | 25.0% |
| ! | AAGTGGATGCAATTTATTTA+GGG | - | chr2.3:26773724-26773743 | MS.gene040570:CDS | 25.0% |
| ! | AATTTATTAAGGAACCTGTT+TGG | + | chr2.3:26773627-26773646 | None:intergenic | 25.0% |
| ! | ACATAAGTGATTATCATGTT+AGG | - | chr2.3:26773564-26773583 | MS.gene040570:CDS | 25.0% |
| ! | CACTAAACATGAAATTGAAA+AGG | + | chr2.3:26773401-26773420 | None:intergenic | 25.0% |
| ! | TTAAAGCTTATCTTCAAACT+CGG | + | chr2.3:26776358-26776377 | None:intergenic | 25.0% |
| !! | GTAATATGTCATGTTGATTA+TGG | - | chr2.3:26773216-26773235 | MS.gene040570:CDS | 25.0% |
| !!! | TTTCATGAACAGATTGATTT+TGG | - | chr2.3:26773244-26773263 | MS.gene040570:CDS | 25.0% |
| AAGATCTTAGAACGATTCTT+GGG | + | chr2.3:26775685-26775704 | None:intergenic | 30.0% | |
| AAGATGTATGCCTCTAAATT+TGG | - | chr2.3:26774524-26774543 | MS.gene040570:CDS | 30.0% | |
| ACAATAATCGTTATTCTCAC+AGG | + | chr2.3:26773904-26773923 | None:intergenic | 30.0% | |
| AGTATAATAAGGACTGAAAG+TGG | - | chr2.3:26773707-26773726 | MS.gene040570:CDS | 30.0% | |
| ATAGTATAAAGAGATACCAG+TGG | + | chr2.3:26774063-26774082 | None:intergenic | 30.0% | |
| ATCACATACTTCAAAGCAAA+TGG | + | chr2.3:26775899-26775918 | None:intergenic | 30.0% | |
| ATTTGTCAATGTAGCATTCT+TGG | + | chr2.3:26775233-26775252 | None:intergenic | 30.0% | |
| CAATAATCGTTATTCTCACA+GGG | + | chr2.3:26773903-26773922 | None:intergenic | 30.0% | |
| CCAATACTTGAATGAAATCA+AGG | - | chr2.3:26775807-26775826 | MS.gene040570:intron | 30.0% | |
| CCTTGATTTCATTCAAGTAT+TGG | + | chr2.3:26775810-26775829 | None:intergenic | 30.0% | |
| GAAAATTTCATAGCACGAAT+AGG | + | chr2.3:26775277-26775296 | None:intergenic | 30.0% | |
| TATGCTTTGATGTTGTAAAG+TGG | + | chr2.3:26776141-26776160 | None:intergenic | 30.0% | |
| TATGGTTGTTTGTACTATTG+AGG | - | chr2.3:26775393-26775412 | MS.gene040570:intron | 30.0% | |
| TCAATAGTACAAACAACCAT+AGG | + | chr2.3:26775394-26775413 | None:intergenic | 30.0% | |
| TTTCATGTTTAGTGTCTGTT+TGG | - | chr2.3:26773407-26773426 | MS.gene040570:CDS | 30.0% | |
| ! | AATGGCTCTCATATTTTCTT+CGG | + | chr2.3:26775881-26775900 | None:intergenic | 30.0% |
| !! | ATTAATCTTATTGATTCCCC+TGG | - | chr2.3:26774143-26774162 | MS.gene040570:CDS | 30.0% |
| !! | TAAAGTTTCAACTGGTTTGA+AGG | - | chr2.3:26775048-26775067 | MS.gene040570:CDS | 30.0% |
| !! | TTAATCTTATTGATTCCCCT+GGG | - | chr2.3:26774144-26774163 | MS.gene040570:CDS | 30.0% |
| !! | TTTTCTGGTAAAGTTTCAAC+TGG | - | chr2.3:26775040-26775059 | MS.gene040570:CDS | 30.0% |
| !!! | AAAGGAAGGTTTTTTGCTTT+TGG | - | chr2.3:26775010-26775029 | MS.gene040570:CDS | 30.0% |
| AAACCTTCCTTTATCAGAAG+CGG | + | chr2.3:26775002-26775021 | None:intergenic | 35.0% | |
| AAAGAGACAAGAAACTGTTG+AGG | - | chr2.3:26775156-26775175 | MS.gene040570:CDS | 35.0% | |
| ACATATGAAGATCCATTGCT+CGG | - | chr2.3:26774416-26774435 | MS.gene040570:CDS | 35.0% | |
| ACTTCTTGAACCTGTTTACA+TGG | - | chr2.3:26776017-26776036 | MS.gene040570:intron | 35.0% | |
| AGATCTTAGAACGATTCTTG+GGG | + | chr2.3:26775684-26775703 | None:intergenic | 35.0% | |
| ATCTTGTTAACTGTCAGAAC+CGG | + | chr2.3:26774305-26774324 | None:intergenic | 35.0% | |
| ATGATCAGAAGGATAAGTTG+TGG | - | chr2.3:26774708-26774727 | MS.gene040570:CDS | 35.0% | |
| ATTCTCAATAACTCTCGAGA+AGG | + | chr2.3:26774378-26774397 | None:intergenic | 35.0% | |
| CAAGATCTTAGAACGATTCT+TGG | + | chr2.3:26775686-26775705 | None:intergenic | 35.0% | |
| CACTATGAAATCAGAGGAAA+AGG | - | chr2.3:26774754-26774773 | MS.gene040570:CDS | 35.0% | |
| CACTTGTATGAATGATCAGA+AGG | - | chr2.3:26774697-26774716 | MS.gene040570:CDS | 35.0% | |
| CGTGTTGAGAATTTGTATGA+GGG | - | chr2.3:26774893-26774912 | MS.gene040570:CDS | 35.0% | |
| GATTTGCAGGATGATTTCAT+GGG | - | chr2.3:26775475-26775494 | MS.gene040570:intron | 35.0% | |
| GGTAGCATATTGATCATCAA+GGG | + | chr2.3:26774921-26774940 | None:intergenic | 35.0% | |
| GGTTTATTCGAGTCTATCAA+CGG | - | chr2.3:26773434-26773453 | MS.gene040570:CDS | 35.0% | |
| GGTTTGAAGGTCAGAATTAT+GGG | - | chr2.3:26775061-26775080 | MS.gene040570:CDS | 35.0% | |
| GTAGCATATTGATCATCAAG+GGG | + | chr2.3:26774920-26774939 | None:intergenic | 35.0% | |
| GTGTTCAGAGAACTGTTATT+TGG | - | chr2.3:26775128-26775147 | MS.gene040570:CDS | 35.0% | |
| GTTATTGCTCATGTTGATCA+TGG | - | chr2.3:26773089-26773108 | MS.gene040570:CDS | 35.0% | |
| TAAACAGGTTCAAGAAGTCT+GGG | + | chr2.3:26776015-26776034 | None:intergenic | 35.0% | |
| TACAATCTGTTGTGCTTGTT+GGG | + | chr2.3:26775589-26775608 | None:intergenic | 35.0% | |
| TATGATGTCATCAGATCCAT+TGG | - | chr2.3:26776254-26776273 | MS.gene040570:CDS | 35.0% | |
| TCATCTTGAGATCTGTTTGA+AGG | - | chr2.3:26775453-26775472 | MS.gene040570:intron | 35.0% | |
| TCGTGTTGAGAATTTGTATG+AGG | - | chr2.3:26774892-26774911 | MS.gene040570:CDS | 35.0% | |
| TGAGAATGCTAATGTGATCA+TGG | - | chr2.3:26774391-26774410 | MS.gene040570:CDS | 35.0% | |
| TGCTACATTGACAAATGAGA+AGG | - | chr2.3:26775237-26775256 | MS.gene040570:CDS | 35.0% | |
| TGGTTTGAAGGTCAGAATTA+TGG | - | chr2.3:26775060-26775079 | MS.gene040570:CDS | 35.0% | |
| TGTTTAGTGTCTGTTTGGAT+CGG | - | chr2.3:26773412-26773431 | MS.gene040570:CDS | 35.0% | |
| TTCATAAACTAGGACCTGTT+TGG | + | chr2.3:26773482-26773501 | None:intergenic | 35.0% | |
| TTTGACACATAAAGCATGAG+AGG | + | chr2.3:26774971-26774990 | None:intergenic | 35.0% | |
| ! | ATGGTGGTTGATATGTGTAA+GGG | - | chr2.3:26775781-26775800 | MS.gene040570:intron | 35.0% |
| ! | ATGTCTTTGAAGAAATGCAG+AGG | - | chr2.3:26776106-26776125 | MS.gene040570:intron | 35.0% |
| ! | CAGAGAACTGTTATTTGGAT+GGG | - | chr2.3:26775133-26775152 | MS.gene040570:CDS | 35.0% |
| ! | GTTTTTGTGTTTGGATTTGC+AGG | - | chr2.3:26773001-26773020 | MS.gene040570:CDS | 35.0% |
| ! | TCAGAGAACTGTTATTTGGA+TGG | - | chr2.3:26775132-26775151 | MS.gene040570:CDS | 35.0% |
| ! | TCCAAAACACCAGATTTTCT+TGG | + | chr2.3:26775740-26775759 | None:intergenic | 35.0% |
| !! | GCTTCTCTGAAGAGTTTTAA+GGG | - | chr2.3:26774095-26774114 | MS.gene040570:CDS | 35.0% |
| !! | TAGCTTGTTGTTGTTGCTAT+AGG | - | chr2.3:26773531-26773550 | MS.gene040570:CDS | 35.0% |
| !!! | CTTCTCTGAAGAGTTTTAAG+GGG | - | chr2.3:26774096-26774115 | MS.gene040570:CDS | 35.0% |
| !!! | TTCTCTGAAGAGTTTTAAGG+GGG | - | chr2.3:26774097-26774116 | MS.gene040570:CDS | 35.0% |
| AAAGCAACTGTTCCTTTCTC+AGG | + | chr2.3:26774458-26774477 | None:intergenic | 40.0% | |
| AAATGGACCACCAAGAATAC+TGG | - | chr2.3:26774611-26774630 | MS.gene040570:CDS | 40.0% | |
| AACCTTCCTTTATCAGAAGC+GGG | + | chr2.3:26775001-26775020 | None:intergenic | 40.0% | |
| AAGATCTTGTCCGAACAGTA+TGG | - | chr2.3:26775697-26775716 | MS.gene040570:intron | 40.0% | |
| AATCCAAAGGACTCAATGAC+AGG | + | chr2.3:26776168-26776187 | None:intergenic | 40.0% | |
| ACAAATCTTTCTTCTCCCCA+GGG | + | chr2.3:26775099-26775118 | None:intergenic | 40.0% | |
| ACACATATCAACCACCATGT+TGG | + | chr2.3:26775779-26775798 | None:intergenic | 40.0% | |
| AGGATCTTGCCAAGAAAATC+TGG | - | chr2.3:26775728-26775747 | MS.gene040570:intron | 40.0% | |
| AGGGATCACTATGAAATCAG+AGG | - | chr2.3:26774748-26774767 | MS.gene040570:CDS | 40.0% | |
| AGTAGCAGAACCAGTATTCT+TGG | + | chr2.3:26774624-26774643 | None:intergenic | 40.0% | |
| AGTGATCAAACACACACTGA+GGG | + | chr2.3:26776230-26776249 | None:intergenic | 40.0% | |
| AGTGTTCTTAATCAGAAGCG+TGG | - | chr2.3:26776081-26776100 | MS.gene040570:intron | 40.0% | |
| ATCAGAGGAAAAGGACTTGA+TGG | - | chr2.3:26774763-26774782 | MS.gene040570:CDS | 40.0% | |
| ATGATTCCCGCTTCTGATAA+AGG | - | chr2.3:26774992-26775011 | MS.gene040570:CDS | 40.0% | |
| CAAGCACAACAGATTGTACA+TGG | - | chr2.3:26775591-26775610 | MS.gene040570:intron | 40.0% | |
| CACATATCAACCACCATGTT+GGG | + | chr2.3:26775778-26775797 | None:intergenic | 40.0% | |
| CGGTAGCATATTGATCATCA+AGG | + | chr2.3:26774922-26774941 | None:intergenic | 40.0% | |
| CTCGTCAACACCAAATTTAG+AGG | + | chr2.3:26774537-26774556 | None:intergenic | 40.0% | |
| CTTATCTTCAAACTCGGAGA+GGG | + | chr2.3:26776352-26776371 | None:intergenic | 40.0% | |
| GAATGAAATCAAGGATTCCG+TGG | - | chr2.3:26775816-26775835 | MS.gene040570:intron | 40.0% | |
| GATCTGTTTGAAGGATTTGC+AGG | - | chr2.3:26775462-26775481 | MS.gene040570:intron | 40.0% | |
| GGATTTGCAGGATGATTTCA+TGG | - | chr2.3:26775474-26775493 | MS.gene040570:intron | 40.0% | |
| GGCATACATCTTTGCAAAGT+TGG | + | chr2.3:26774516-26774535 | None:intergenic | 40.0% | |
| GTAAACAGGTTCAAGAAGTC+TGG | + | chr2.3:26776016-26776035 | None:intergenic | 40.0% | |
| GTACAATCTGTTGTGCTTGT+TGG | + | chr2.3:26775590-26775609 | None:intergenic | 40.0% | |
| GTGACTTACTCATCACAGTT+CGG | + | chr2.3:26775567-26775586 | None:intergenic | 40.0% | |
| GTGTTAATGACCTGCTTGAT+AGG | + | chr2.3:26774680-26774699 | None:intergenic | 40.0% | |
| GTTCAAGTGTATCCTGAGAA+AGG | - | chr2.3:26774443-26774462 | MS.gene040570:CDS | 40.0% | |
| GTTTAGTGTCTGTTTGGATC+GGG | - | chr2.3:26773413-26773432 | MS.gene040570:CDS | 40.0% | |
| GTTTGTACTATTGAGGAGTC+TGG | - | chr2.3:26775400-26775419 | MS.gene040570:intron | 40.0% | |
| TACAAATCTTTCTTCTCCCC+AGG | + | chr2.3:26775100-26775119 | None:intergenic | 40.0% | |
| TCAGAGGAAAAGGACTTGAT+GGG | - | chr2.3:26774764-26774783 | MS.gene040570:CDS | 40.0% | |
| TCAGTGTGTGTTTGATCACT+GGG | - | chr2.3:26776230-26776249 | MS.gene040570:CDS | 40.0% | |
| TCTTGAACCTGTTTACATGG+TGG | - | chr2.3:26776020-26776039 | MS.gene040570:intron | 40.0% | |
| TCTTGCTAAGTCAGATCCTA+TGG | - | chr2.3:26775375-26775394 | MS.gene040570:intron | 40.0% | |
| TGATGAGTTACGTCGGATTA+TGG | - | chr2.3:26773037-26773056 | MS.gene040570:CDS | 40.0% | |
| TGCATGACACGTTTCATCAA+AGG | + | chr2.3:26774794-26774813 | None:intergenic | 40.0% | |
| TGCTCATGTTGATCATGGTA+TGG | - | chr2.3:26773094-26773113 | MS.gene040570:CDS | 40.0% | |
| TGGATTTCCACCATGTAAAC+AGG | + | chr2.3:26776030-26776049 | None:intergenic | 40.0% | |
| TGTTGACGAGACAAAGATGA+TGG | - | chr2.3:26774547-26774566 | MS.gene040570:CDS | 40.0% | |
| TTACAGCTGATGAGTTACGT+CGG | - | chr2.3:26773030-26773049 | MS.gene040570:CDS | 40.0% | |
| TTATCTTCAAACTCGGAGAG+GGG | + | chr2.3:26776351-26776370 | None:intergenic | 40.0% | |
| TTGAGACCTTCAACAAGCTT+AGG | + | chr2.3:26775352-26775371 | None:intergenic | 40.0% | |
| ! | AATTACTGATGGAGCACTAG+TGG | - | chr2.3:26774205-26774224 | MS.gene040570:CDS | 40.0% |
| ! | ATGTTGTAAAGTGGAGTACC+AGG | + | chr2.3:26776132-26776151 | None:intergenic | 40.0% |
| ! | CATGGTGGTTGATATGTGTA+AGG | - | chr2.3:26775780-26775799 | MS.gene040570:intron | 40.0% |
| ! | GCCAAGAAAATCTGGTGTTT+TGG | - | chr2.3:26775736-26775755 | MS.gene040570:intron | 40.0% |
| ! | GCTTTTGGTCGTGTATTTTC+TGG | - | chr2.3:26775025-26775044 | MS.gene040570:CDS | 40.0% |
| ! | GGTTCTGACAGTTAACAAGA+TGG | - | chr2.3:26774304-26774323 | MS.gene040570:CDS | 40.0% |
| !! | AAAGATGATGGAGAGGCTTT+GGG | - | chr2.3:26774559-26774578 | MS.gene040570:CDS | 40.0% |
| !! | CGCTTCTCTGAAGAGTTTTA+AGG | - | chr2.3:26774094-26774113 | MS.gene040570:CDS | 40.0% |
| !! | GATCTTCCTAAGCTTGTTGA+AGG | - | chr2.3:26775343-26775362 | MS.gene040570:CDS | 40.0% |
| AAAGCATGAGAGGTCCTTCA+GGG | + | chr2.3:26774961-26774980 | None:intergenic | 45.0% | |
| ACCGATATTCGCAAGAGGAA+GGG | - | chr2.3:26776306-26776325 | MS.gene040570:intron | 45.0% | |
| ACTTGAACATCACCGAGCAA+TGG | + | chr2.3:26774431-26774450 | None:intergenic | 45.0% | |
| AGCAGAACCAGTATTCTTGG+TGG | + | chr2.3:26774621-26774640 | None:intergenic | 45.0% | |
| AGGGTCACAGTTTCTGATAG+CGG | + | chr2.3:26774942-26774961 | None:intergenic | 45.0% | |
| AGGTTCAAGAAGTCTGGGTT+TGG | + | chr2.3:26776010-26776029 | None:intergenic | 45.0% | |
| ATAGCGACTGTGTTACCACA+AGG | + | chr2.3:26775187-26775206 | None:intergenic | 45.0% | |
| ATCAGAAACTGTGACCCTGA+AGG | - | chr2.3:26774944-26774963 | MS.gene040570:CDS | 45.0% | |
| ATTATAGCGCAAGAGGTTGC+TGG | - | chr2.3:26773978-26773997 | MS.gene040570:CDS | 45.0% | |
| CAAAGGACTCAATGACAGGA+AGG | + | chr2.3:26776164-26776183 | None:intergenic | 45.0% | |
| CAGTGATCAAACACACACTG+AGG | + | chr2.3:26776231-26776250 | None:intergenic | 45.0% | |
| CATACTGATGCTATCCACAG+AGG | - | chr2.3:26775928-26775947 | MS.gene040570:intron | 45.0% | |
| CTCAGTGTGTGTTTGATCAC+TGG | - | chr2.3:26776229-26776248 | MS.gene040570:CDS | 45.0% | |
| CTCTGTGGATAGCATCAGTA+TGG | + | chr2.3:26775930-26775949 | None:intergenic | 45.0% | |
| CTCTTGCGCTATAATTCCAG+CGG | + | chr2.3:26773973-26773992 | None:intergenic | 45.0% | |
| CTGTTATGAGCCTATCAAGC+AGG | - | chr2.3:26774667-26774686 | MS.gene040570:CDS | 45.0% | |
| CTTCCTGTCATTGAGTCCTT+TGG | - | chr2.3:26776162-26776181 | MS.gene040570:intron | 45.0% | |
| CTTGTCCCAACCATACTGTT+CGG | + | chr2.3:26775710-26775729 | None:intergenic | 45.0% | |
| CTTGTCCGAACAGTATGGTT+GGG | - | chr2.3:26775702-26775721 | MS.gene040570:intron | 45.0% | |
| GATGTCATCAGATCCATTGG+AGG | - | chr2.3:26776257-26776276 | MS.gene040570:CDS | 45.0% | |
| GCTGCACTTCGAATTACTGA+TGG | - | chr2.3:26774194-26774213 | MS.gene040570:CDS | 45.0% | |
| GCTTATCTTCAAACTCGGAG+AGG | + | chr2.3:26776353-26776372 | None:intergenic | 45.0% | |
| GGTATCACTATCAAGTCCAC+TGG | - | chr2.3:26774044-26774063 | MS.gene040570:CDS | 45.0% | |
| GTCAGATCATTCCTACTGCT+AGG | - | chr2.3:26775956-26775975 | MS.gene040570:intron | 45.0% | |
| TAAAGCATGAGAGGTCCTTC+AGG | + | chr2.3:26774962-26774981 | None:intergenic | 45.0% | |
| TAGAAGACTCTCCTAGCAGT+AGG | + | chr2.3:26775970-26775989 | None:intergenic | 45.0% | |
| TAGGACCTGTTTGGATCTCT+CGG | + | chr2.3:26773473-26773492 | None:intergenic | 45.0% | |
| TCCTATTGTGCCCTCATCAA+TGG | + | chr2.3:26775650-26775669 | None:intergenic | 45.0% | |
| TCGATCCTGCCACTAAGAAA+TGG | - | chr2.3:26774594-26774613 | MS.gene040570:CDS | 45.0% | |
| TCTGGAGAACACATTGTTGC+TGG | - | chr2.3:26775418-26775437 | MS.gene040570:intron | 45.0% | |
| TCTTGTCCGAACAGTATGGT+TGG | - | chr2.3:26775701-26775720 | MS.gene040570:intron | 45.0% | |
| TGAAACGTGTCATGCAGACA+TGG | - | chr2.3:26774798-26774817 | MS.gene040570:CDS | 45.0% | |
| TGTGGATAGCATCAGTATGG+AGG | + | chr2.3:26775927-26775946 | None:intergenic | 45.0% | |
| TTCCAGTGGGCATCAAAAGA+AGG | - | chr2.3:26775847-26775866 | MS.gene040570:intron | 45.0% | |
| TTCCCGCTTCTGATAAAGGA+AGG | - | chr2.3:26774996-26775015 | MS.gene040570:CDS | 45.0% | |
| TTCTCCCCAGGGACAAAATT+TGG | + | chr2.3:26775088-26775107 | None:intergenic | 45.0% | |
| TTGCAGGATGATTTCATGGG+TGG | - | chr2.3:26775478-26775497 | MS.gene040570:intron | 45.0% | |
| TTGTGACCGATATTCGCAAG+AGG | - | chr2.3:26776301-26776320 | MS.gene040570:intron | 45.0% | |
| TTGTGGTAACACAGTCGCTA+TGG | - | chr2.3:26775186-26775205 | MS.gene040570:CDS | 45.0% | |
| TTTGAAGAAATGCAGAGGCC+TGG | - | chr2.3:26776111-26776130 | MS.gene040570:intron | 45.0% | |
| ! | ATGGGACCAAATTTTGTCCC+TGG | - | chr2.3:26775079-26775098 | MS.gene040570:CDS | 45.0% |
| ! | CTTGGTGGTCCATTTCTTAG+TGG | + | chr2.3:26774606-26774625 | None:intergenic | 45.0% |
| ! | TCTCTCTGAAGGACACAACA+GGG | + | chr2.3:26775525-26775544 | None:intergenic | 45.0% |
| ! | TGGGACCAAATTTTGTCCCT+GGG | - | chr2.3:26775080-26775099 | MS.gene040570:CDS | 45.0% |
| ! | TTCAAGAAGTGCAGTGCTTG+CGG | + | chr2.3:26774828-26774847 | None:intergenic | 45.0% |
| ! | TTTTCCCGAGAGATCCAAAC+AGG | - | chr2.3:26773465-26773484 | MS.gene040570:CDS | 45.0% |
| !! | AAGATGATGGAGAGGCTTTG+GGG | - | chr2.3:26774560-26774579 | MS.gene040570:CDS | 45.0% |
| !! | ACGAGACAAAGATGATGGAG+AGG | - | chr2.3:26774552-26774571 | MS.gene040570:CDS | 45.0% |
| !! | ATCCCTAGCTTTGTCAGCAT+CGG | + | chr2.3:26774734-26774753 | None:intergenic | 45.0% |
| !! | CAAAGATGATGGAGAGGCTT+TGG | - | chr2.3:26774558-26774577 | MS.gene040570:CDS | 45.0% |
| !! | CTCTAGAACAGTCTCTCTGA+AGG | + | chr2.3:26775536-26775555 | None:intergenic | 45.0% |
| !!! | AAATGAAAATAATTTAATTT+AGG | - | chr2.3:26773500-26773519 | MS.gene040570:CDS | 5.0% |
| !!! | TTATTTTTTTTCAAATAATT+TGG | - | chr2.3:26773175-26773194 | MS.gene040570:CDS | 5.0% |
| AAGCTAGACCGTTGGAGGAT+GGG | - | chr2.3:26775614-26775633 | MS.gene040570:intron | 50.0% | |
| AATTCCAGCGGCAGCAACAA+GGG | + | chr2.3:26773961-26773980 | None:intergenic | 50.0% | |
| ACGTTCAGCTTCATCAGCAC+GGG | + | chr2.3:26774024-26774043 | None:intergenic | 50.0% | |
| ACTGATGCTATCCACAGAGG+AGG | - | chr2.3:26775931-26775950 | MS.gene040570:intron | 50.0% | |
| AGGACCTGTTTGGATCTCTC+GGG | + | chr2.3:26773472-26773491 | None:intergenic | 50.0% | |
| AGGCTCTTGGAGAAAGGATC+AGG | - | chr2.3:26774279-26774298 | MS.gene040570:CDS | 50.0% | |
| ATCAAGGATTCCGTGGTTGC+TGG | - | chr2.3:26775823-26775842 | MS.gene040570:intron | 50.0% | |
| ATGAGAAATCGACGTGCCCA+GGG | + | chr2.3:26774163-26774182 | None:intergenic | 50.0% | |
| CAACTGGCTGGAGAATCCAA+AGG | + | chr2.3:26776181-26776200 | None:intergenic | 50.0% | |
| CACGTTCAGCTTCATCAGCA+CGG | + | chr2.3:26774025-26774044 | None:intergenic | 50.0% | |
| CGAACAGTATGGTTGGGACA+AGG | - | chr2.3:26775708-26775727 | MS.gene040570:intron | 50.0% | |
| CGATACCTCTGAGCTGTAGA+TGG | + | chr2.3:26774875-26774894 | None:intergenic | 50.0% | |
| CGCTGGAATTATAGCGCAAG+AGG | - | chr2.3:26773971-26773990 | MS.gene040570:CDS | 50.0% | |
| CTCTGAGCTGTAGATGGAGA+GGG | + | chr2.3:26774869-26774888 | None:intergenic | 50.0% | |
| CTTGCAGAGGCCATTGATGA+GGG | - | chr2.3:26775637-26775656 | MS.gene040570:intron | 50.0% | |
| GAACACATTGTTGCTGGTGC+AGG | - | chr2.3:26775424-26775443 | MS.gene040570:intron | 50.0% | |
| GACCGATATTCGCAAGAGGA+AGG | - | chr2.3:26776305-26776324 | MS.gene040570:intron | 50.0% | |
| GCCCTTCCTCTTGCGAATAT+CGG | + | chr2.3:26776310-26776329 | None:intergenic | 50.0% | |
| GGTAACACAGTCGCTATGGT+TGG | - | chr2.3:26775190-26775209 | MS.gene040570:CDS | 50.0% | |
| GTACATGGAAGCTAGACCGT+TGG | - | chr2.3:26775606-26775625 | MS.gene040570:intron | 50.0% | |
| GTGGTCCATTTCTTAGTGGC+AGG | + | chr2.3:26774602-26774621 | None:intergenic | 50.0% | |
| TAATTCCAGCGGCAGCAACA+AGG | + | chr2.3:26773962-26773981 | None:intergenic | 50.0% | |
| TCATCAGATCCATTGGAGGC+TGG | - | chr2.3:26776261-26776280 | MS.gene040570:CDS | 50.0% | |
| TCCTTTCTCCAAGAGCCTGT+CGG | + | chr2.3:26774277-26774296 | None:intergenic | 50.0% | |
| TCGAAGTGCAGCAGTAACCT+CGG | + | chr2.3:26774186-26774205 | None:intergenic | 50.0% | |
| TCTGAAGGACACAACAGGGT+CGG | + | chr2.3:26775521-26775540 | None:intergenic | 50.0% | |
| TCTGAGCTGTAGATGGAGAG+GGG | + | chr2.3:26774868-26774887 | None:intergenic | 50.0% | |
| TCTTGGAGAAAGGATCAGGC+CGG | - | chr2.3:26774283-26774302 | MS.gene040570:CDS | 50.0% | |
| TGAACAGCAACACGCACAAC+AGG | + | chr2.3:26775307-26775326 | None:intergenic | 50.0% | |
| TGGATTCTCCAGCCAGTTGA+GGG | - | chr2.3:26776182-26776201 | MS.gene040570:intron | 50.0% | |
| TTGGATTCTCCAGCCAGTTG+AGG | - | chr2.3:26776181-26776200 | MS.gene040570:intron | 50.0% | |
| ! | ATACCACCAAGAGCTTGCTC+AGG | + | chr2.3:26776057-26776076 | None:intergenic | 50.0% |
| ! | ATGAGGGCACAATAGGACCA+AGG | - | chr2.3:26775653-26775672 | MS.gene040570:intron | 50.0% |
| ! | CACAGTCGCTATGGTTGGTT+TGG | - | chr2.3:26775195-26775214 | MS.gene040570:CDS | 50.0% |
| ! | CACCTTCTTTTGATGCCCAC+TGG | + | chr2.3:26775852-26775871 | None:intergenic | 50.0% |
| ! | GCCATTGATGAGGGCACAAT+AGG | - | chr2.3:26775646-26775665 | MS.gene040570:intron | 50.0% |
| ! | GGAACAGTTGCTTTCTCTGC+TGG | - | chr2.3:26774464-26774483 | MS.gene040570:CDS | 50.0% |
| ! | GGGACCAAATTTTGTCCCTG+GGG | - | chr2.3:26775081-26775100 | MS.gene040570:CDS | 50.0% |
| ! | GTCTCTCTGAAGGACACAAC+AGG | + | chr2.3:26775526-26775545 | None:intergenic | 50.0% |
| ! | GTTCTGCTACTTGCAAGCGT+GGG | - | chr2.3:26774633-26774652 | MS.gene040570:CDS | 50.0% |
| ! | TACTGATGGAGCACTAGTGG+TGG | - | chr2.3:26774208-26774227 | MS.gene040570:CDS | 50.0% |
| ! | TCAAGAAGTGCAGTGCTTGC+GGG | + | chr2.3:26774827-26774846 | None:intergenic | 50.0% |
| ! | TGAGGGCACAATAGGACCAA+GGG | - | chr2.3:26775654-26775673 | MS.gene040570:intron | 50.0% |
| ! | TTCCTTGAGCTCCAGGTTGA+TGG | - | chr2.3:26774335-26774354 | MS.gene040570:CDS | 50.0% |
| !! | CTCTGCTGGTTTGCATGGTT+GGG | - | chr2.3:26774478-26774497 | MS.gene040570:CDS | 50.0% |
| !! | GCTTTCTCTGCTGGTTTGCA+TGG | - | chr2.3:26774473-26774492 | MS.gene040570:CDS | 50.0% |
| !! | TCTCTGCTGGTTTGCATGGT+TGG | - | chr2.3:26774477-26774496 | MS.gene040570:CDS | 50.0% |
| !! | TGGTGGTGGATTGTGTCGAA+GGG | - | chr2.3:26774225-26774244 | MS.gene040570:CDS | 50.0% |
| !! | TGTTTTGGACCTGAGACCAC+CGG | - | chr2.3:26775751-26775770 | MS.gene040570:intron | 50.0% |
| !!! | AGTTTTAAGGGGGAGCGCAA+TGG | - | chr2.3:26774107-26774126 | MS.gene040570:CDS | 50.0% |
| !!! | GTTTTAAGGGGGAGCGCAAT+GGG | - | chr2.3:26774108-26774127 | MS.gene040570:CDS | 50.0% |
| AAGCCTCCTCTCCATCAACC+TGG | + | chr2.3:26774349-26774368 | None:intergenic | 55.0% | |
| ACTGTTGAGGACGTGCCTTG+TGG | - | chr2.3:26775169-26775188 | MS.gene040570:CDS | 55.0% | |
| AGTTGAGGGCCGCAACATCA+GGG | - | chr2.3:26776196-26776215 | MS.gene040570:intron | 55.0% | |
| ATCAACCACCATGTTGGGCC+CGG | + | chr2.3:26775773-26775792 | None:intergenic | 55.0% | |
| CAAGCTCCTGAGCAAGCTCT+TGG | - | chr2.3:26776048-26776067 | MS.gene040570:intron | 55.0% | |
| CAGATGCTTCCTTGAGCTCC+AGG | - | chr2.3:26774328-26774347 | MS.gene040570:CDS | 55.0% | |
| CATGGAAGCTAGACCGTTGG+AGG | - | chr2.3:26775609-26775628 | MS.gene040570:intron | 55.0% | |
| CCACTGGAATCCAGCAACCA+CGG | + | chr2.3:26775836-26775855 | None:intergenic | 55.0% | |
| CCTCTCCATCTACAGCTCAG+AGG | - | chr2.3:26774867-26774886 | MS.gene040570:CDS | 55.0% | |
| CCTCTGAGCTGTAGATGGAG+AGG | + | chr2.3:26774870-26774889 | None:intergenic | 55.0% | |
| CGATTCTTGGGGTCATCCCT+TGG | + | chr2.3:26775673-26775692 | None:intergenic | 55.0% | |
| CGTGGTTGCTGGATTCCAGT+GGG | - | chr2.3:26775834-26775853 | MS.gene040570:intron | 55.0% | |
| CTCCATCAACCTGGAGCTCA+AGG | + | chr2.3:26774340-26774359 | None:intergenic | 55.0% | |
| GAAGCTAGACCGTTGGAGGA+TGG | - | chr2.3:26775613-26775632 | MS.gene040570:intron | 55.0% | |
| GAATGCCTGCCCTGATGTTG+CGG | + | chr2.3:26776208-26776227 | None:intergenic | 55.0% | |
| GACTGAAACTGTGCTCCGAC+AGG | - | chr2.3:26774259-26774278 | MS.gene040570:CDS | 55.0% | |
| GATGAGAAATCGACGTGCCC+AGG | + | chr2.3:26774164-26774183 | None:intergenic | 55.0% | |
| GATGCTATCCACAGAGGAGG+TGG | - | chr2.3:26775934-26775953 | MS.gene040570:intron | 55.0% | |
| GCTTGCAGAGGCCATTGATG+AGG | - | chr2.3:26775636-26775655 | MS.gene040570:intron | 55.0% | |
| GCTTGTGATCCAGCCTCCAA+TGG | + | chr2.3:26776273-26776292 | None:intergenic | 55.0% | |
| GGCCGATGCTGACAAAGCTA+GGG | - | chr2.3:26774729-26774748 | MS.gene040570:CDS | 55.0% | |
| TCCGACAGGCTCTTGGAGAA+AGG | - | chr2.3:26774273-26774292 | MS.gene040570:CDS | 55.0% | |
| TCGCAAGAGGAAGGGCTTGA+AGG | - | chr2.3:26776314-26776333 | MS.gene040570:intron | 55.0% | |
| TCTGCAAGCCCATCCTCCAA+CGG | + | chr2.3:26775625-26775644 | None:intergenic | 55.0% | |
| TGAGAAATCGACGTGCCCAG+GGG | + | chr2.3:26774162-26774181 | None:intergenic | 55.0% | |
| TGATCTGACCACCTCCTCTG+TGG | + | chr2.3:26775945-26775964 | None:intergenic | 55.0% | |
| TGGCCGATGCTGACAAAGCT+AGG | - | chr2.3:26774728-26774747 | MS.gene040570:CDS | 55.0% | |
| ! | CAAGAAGTGCAGTGCTTGCG+GGG | + | chr2.3:26774826-26774845 | None:intergenic | 55.0% |
| ! | CAAGAGCTTGCTCAGGAGCT+TGG | + | chr2.3:26776050-26776069 | None:intergenic | 55.0% |
| ! | CGTGCTGATGAAGCTGAACG+TGG | - | chr2.3:26774023-26774042 | MS.gene040570:CDS | 55.0% |
| ! | GCGTGTTGCTGTTCAGTGCA+AGG | - | chr2.3:26775312-26775331 | MS.gene040570:CDS | 55.0% |
| ! | GGTTCTGCTACTTGCAAGCG+TGG | - | chr2.3:26774632-26774651 | MS.gene040570:CDS | 55.0% |
| ! | TGATGGAGCACTAGTGGTGG+TGG | - | chr2.3:26774211-26774230 | MS.gene040570:CDS | 55.0% |
| !! | GCACGTCGATTTCTCATCCG+AGG | - | chr2.3:26774166-26774185 | MS.gene040570:CDS | 55.0% |
| !! | GGTGGTGGATTGTGTCGAAG+GGG | - | chr2.3:26774226-26774245 | MS.gene040570:CDS | 55.0% |
| !! | GTGGTGGTGGATTGTGTCGA+AGG | - | chr2.3:26774224-26774243 | MS.gene040570:CDS | 55.0% |
| !! | GTTTTGGACCTGAGACCACC+GGG | - | chr2.3:26775752-26775771 | MS.gene040570:intron | 55.0% |
| !! | TGAGCTCCAGGTTGATGGAG+AGG | - | chr2.3:26774340-26774359 | MS.gene040570:CDS | 55.0% |
| ACTGTGCTCCGACAGGCTCT+TGG | - | chr2.3:26774266-26774285 | MS.gene040570:CDS | 60.0% | |
| CAGTTGAGGGCCGCAACATC+AGG | - | chr2.3:26776195-26776214 | MS.gene040570:intron | 60.0% | |
| CCGTGGTTGCTGGATTCCAG+TGG | - | chr2.3:26775833-26775852 | MS.gene040570:intron | 60.0% | |
| CTGATGTTGCGGCCCTCAAC+TGG | + | chr2.3:26776197-26776216 | None:intergenic | 60.0% | |
| GATTCCCTTGTTGCTGCCGC+TGG | - | chr2.3:26773954-26773973 | MS.gene040570:CDS | 60.0% | |
| GCTCCTGAGCAAGCTCTTGG+TGG | - | chr2.3:26776051-26776070 | MS.gene040570:intron | 60.0% | |
| GGGTTTGGCAGTCAGCTGTG+AGG | + | chr2.3:26775995-26776014 | None:intergenic | 60.0% | |
| ! | GTTGGAGGATGGGCTTGCAG+AGG | - | chr2.3:26775624-26775643 | MS.gene040570:intron | 60.0% |
| !! | GCTCCAGGTTGATGGAGAGG+AGG | - | chr2.3:26774343-26774362 | MS.gene040570:CDS | 60.0% |
| AACCACCATGTTGGGCCCGG+TGG | + | chr2.3:26775770-26775789 | None:intergenic | 65.0% | |
| ATGTTGGGCCCGGTGGTCTC+AGG | + | chr2.3:26775763-26775782 | None:intergenic | 65.0% | |
| TGAGACCACCGGGCCCAACA+TGG | - | chr2.3:26775762-26775781 | MS.gene040570:intron | 65.0% | |
| TGTTGCGGCCCTCAACTGGC+TGG | + | chr2.3:26776193-26776212 | None:intergenic | 65.0% | |
| GACCACCGGGCCCAACATGG+TGG | - | chr2.3:26775765-26775784 | MS.gene040570:intron | 70.0% | |
| GAGGGCCGCAACATCAGGGC+AGG | - | chr2.3:26776200-26776219 | MS.gene040570:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 26772930 | 26776377 | 26772930 | ID=MS.gene040570 |
| chr2.3 | mRNA | 26772930 | 26776377 | 26772930 | ID=MS.gene040570.t1;Parent=MS.gene040570 |
| chr2.3 | exon | 26776375 | 26776377 | 26776375 | ID=MS.gene040570.t1.exon1;Parent=MS.gene040570.t1 |
| chr2.3 | CDS | 26776375 | 26776377 | 26776375 | ID=cds.MS.gene040570.t1;Parent=MS.gene040570.t1 |
| chr2.3 | exon | 26776197 | 26776284 | 26776197 | ID=MS.gene040570.t1.exon2;Parent=MS.gene040570.t1 |
| chr2.3 | CDS | 26776197 | 26776284 | 26776197 | ID=cds.MS.gene040570.t1;Parent=MS.gene040570.t1 |
| chr2.3 | exon | 26772930 | 26775370 | 26772930 | ID=MS.gene040570.t1.exon3;Parent=MS.gene040570.t1 |
| chr2.3 | CDS | 26772930 | 26775370 | 26772930 | ID=cds.MS.gene040570.t1;Parent=MS.gene040570.t1 |
| Gene Sequence |
| Protein sequence |