AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042846

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042846.t1 MTR_6g069000 97.788 452 10 0 1 452 11 462 0.0 922
MS.gene042846.t1 MTR_6g069000 97.788 452 10 0 1 452 1 452 0.0 922
MS.gene042846.t1 MTR_8g077810 36.585 451 279 4 32 475 25 475 4.13e-108 330
MS.gene042846.t1 MTR_5g020020 35.242 454 282 5 30 475 26 475 1.50e-105 323
MS.gene042846.t1 MTR_5g082520 35.570 447 275 5 39 480 27 465 2.96e-103 317
MS.gene042846.t1 MTR_7g033040 35.032 471 293 6 12 477 5 467 6.19e-102 314
MS.gene042846.t1 MTR_8g016180 32.909 471 300 7 5 469 1 461 1.33e-101 313
MS.gene042846.t1 MTR_3g070380 34.513 452 285 6 39 485 28 473 5.19e-100 309
MS.gene042846.t1 MTR_8g076510 32.739 449 279 10 41 478 40 476 2.95e-91 286
MS.gene042846.t1 MTR_5g021220 30.228 483 300 9 11 469 9 478 2.13e-86 274
MS.gene042846.t1 MTR_8g016180 31.852 405 268 5 5 403 1 403 1.47e-82 261
MS.gene042846.t1 MTR_5g010750 31.729 457 293 7 38 483 29 477 4.57e-82 263
MS.gene042846.t1 MTR_6g015910 29.362 470 306 8 12 475 10 459 2.78e-77 249
MS.gene042846.t1 MTR_7g016040 30.556 468 306 6 10 475 8 458 4.46e-77 249
MS.gene042846.t1 MTR_5g010750 32.227 422 271 6 38 452 29 442 6.90e-77 248
MS.gene042846.t1 MTR_3g007320 28.723 470 309 8 12 475 10 459 7.24e-77 248
MS.gene042846.t1 MTR_8g089800 30.415 434 279 9 40 459 43 467 2.69e-70 232
MS.gene042846.t1 MTR_5g020020 34.024 338 211 6 146 475 68 401 9.43e-69 226
MS.gene042846.t1 MTR_5g025610 29.832 476 304 12 10 477 7 460 3.09e-66 221
MS.gene042846.t1 MTR_2g031930 29.673 428 281 8 40 456 45 463 7.83e-65 218
MS.gene042846.t1 MTR_2g031930 29.717 424 278 8 40 452 41 455 1.78e-64 216
MS.gene042846.t1 MTR_2g031920 29.011 455 296 10 40 479 41 483 3.69e-64 216
MS.gene042846.t1 MTR_5g025610 29.736 454 290 11 10 456 7 438 6.07e-64 214
MS.gene042846.t1 MTR_8g072260 29.978 447 289 11 40 480 37 465 3.81e-63 213
MS.gene042846.t1 MTR_0045s0060 28.478 460 306 10 30 479 30 476 1.33e-61 209
MS.gene042846.t1 MTR_8g072260 30.144 418 269 10 40 452 37 436 2.17e-60 205
MS.gene042846.t1 MTR_1g019410 29.139 453 300 8 7 452 2 440 2.24e-60 206
MS.gene042846.t1 MTR_4g086130 31.591 440 269 11 28 454 21 441 3.35e-60 205
MS.gene042846.t1 MTR_1g037580 31.544 447 285 9 13 454 19 449 2.24e-58 200
MS.gene042846.t1 MTR_5g014250 26.122 490 312 14 9 468 9 478 2.83e-56 195
MS.gene042846.t1 MTR_5g091760 28.106 491 326 9 5 481 1 478 1.58e-55 192
MS.gene042846.t1 MTR_6g034940 28.238 471 294 14 10 459 12 459 2.77e-54 189
MS.gene042846.t1 MTR_5g092150 26.247 461 318 7 32 480 21 471 4.09e-54 189
MS.gene042846.t1 MTR_0045s0060 27.586 406 277 7 79 479 1 394 1.35e-53 185
MS.gene042846.t1 MTR_4g086040 29.009 424 277 9 39 454 37 444 3.61e-52 183
MS.gene042846.t1 MTR_5g025610 28.928 401 264 9 10 403 7 393 4.94e-52 181
MS.gene042846.t1 MTR_4g005230 29.011 455 291 15 40 479 43 480 6.01e-52 183
MS.gene042846.t1 MTR_0045s0070 25.658 456 314 9 35 479 35 476 6.28e-51 180
MS.gene042846.t1 MTR_0045s0070 26.402 428 291 8 35 452 35 448 2.17e-49 175
MS.gene042846.t1 MTR_5g014240 27.383 493 320 17 9 479 9 485 3.77e-49 176
MS.gene042846.t1 MTR_1g032950 26.164 451 299 14 40 479 43 470 4.04e-49 175
MS.gene042846.t1 MTR_8g072260 28.997 369 247 8 40 403 37 395 9.15e-49 174
MS.gene042846.t1 MTR_8g012970 26.620 432 287 12 40 456 45 461 1.81e-48 174
MS.gene042846.t1 MTR_8g100135 25.799 438 305 7 33 459 27 455 2.23e-48 173
MS.gene042846.t1 MTR_8g076940 26.386 451 309 9 13 453 19 456 2.34e-47 171
MS.gene042846.t1 MTR_7g016040 28.814 354 239 5 15 366 13 355 3.64e-46 165
MS.gene042846.t1 MTR_3g112120 24.625 467 320 11 9 459 11 461 1.08e-45 166
MS.gene042846.t1 MTR_8g089190 26.256 438 291 10 40 460 1 423 2.58e-45 164
MS.gene042846.t1 MTR_3g467130 26.376 436 292 10 37 456 30 452 4.68e-45 164
MS.gene042846.t1 MTR_3g467140 26.840 462 305 12 11 456 8 452 1.47e-43 160
MS.gene042846.t1 MTR_8g076940 26.000 400 283 7 13 403 19 414 2.70e-38 145
MS.gene042846.t1 MTR_0045s0080 24.740 384 267 8 30 403 30 401 1.54e-36 139
MS.gene042846.t1 MTR_8g100135 25.208 361 257 6 33 382 27 385 1.60e-33 131
MS.gene042846.t1 MTR_8g076940 26.039 361 254 7 13 364 19 375 2.24e-32 127
MS.gene042846.t1 MTR_8g076940 26.039 361 254 7 13 364 19 375 2.94e-32 127
MS.gene042846.t1 MTR_8g089190 25.496 353 237 9 40 375 1 344 8.92e-31 122
MS.gene042846.t1 MTR_1g032980 25.685 292 204 7 40 320 16 305 1.65e-29 120
MS.gene042846.t1 MTR_3g467140 28.846 312 196 9 158 456 21 319 2.17e-27 113
MS.gene042846.t1 MTR_5g007550 24.948 477 312 16 4 454 8 464 3.72e-27 114
MS.gene042846.t1 MTR_5g007450 24.520 469 312 15 10 454 14 464 1.52e-26 112
MS.gene042846.t1 MTR_1g037370 24.777 448 289 16 39 454 30 461 4.14e-22 99.4
MS.gene042846.t1 MTR_5g094570 22.332 506 337 17 10 482 10 492 6.75e-22 99.0
MS.gene042846.t1 MTR_5g073250 22.800 500 336 17 13 482 13 492 2.38e-21 97.4
MS.gene042846.t1 MTR_1g035140 22.965 479 325 14 6 454 3 467 6.56e-21 95.9
MS.gene042846.t1 MTR_5g072980 23.385 449 298 13 40 454 33 469 8.74e-21 95.5
MS.gene042846.t1 MTR_5g072930 23.385 449 298 13 40 454 33 469 8.74e-21 95.5
MS.gene042846.t1 MTR_5g094550 21.849 476 323 14 10 454 10 467 1.36e-20 95.1
MS.gene042846.t1 MTR_5g094560 21.807 509 336 19 10 482 10 492 2.13e-20 94.4
MS.gene042846.t1 MTR_5g007460 24.945 457 291 19 34 454 3 443 2.48e-20 94.0
MS.gene042846.t1 MTR_7g075610 21.875 480 325 15 11 454 5 470 4.47e-20 93.6
MS.gene042846.t1 MTR_7g096340 22.500 480 311 20 45 480 40 502 4.81e-20 93.2
MS.gene042846.t1 MTR_5g094520 22.817 504 337 18 10 482 41 523 5.51e-20 93.2
MS.gene042846.t1 MTR_5g073230 21.443 499 304 18 27 482 28 481 5.80e-20 92.8
MS.gene042846.t1 MTR_8g046240 23.554 484 319 18 6 454 6 473 5.99e-20 93.2
MS.gene042846.t1 MTR_0181s0030 21.622 481 325 15 9 454 6 469 9.05e-20 92.4
MS.gene042846.t1 MTR_5g019010 24.652 503 326 21 15 477 9 498 9.10e-20 92.4
MS.gene042846.t1 MTR_3g057900 21.373 510 338 16 13 482 3 489 9.54e-20 92.4
MS.gene042846.t1 MTR_3g057910 23.984 492 313 20 29 482 27 495 1.26e-19 92.0
MS.gene042846.t1 MTR_4g095050 22.892 498 301 18 13 461 8 471 1.32e-19 92.0
MS.gene042846.t1 MTR_3g057970 21.277 470 328 14 13 454 3 458 1.45e-19 91.7
MS.gene042846.t1 MTR_1g031700 22.979 470 320 15 14 454 8 464 2.44e-19 91.3
MS.gene042846.t1 MTR_1g492820 21.875 480 331 15 8 453 14 483 3.00e-19 90.9
MS.gene042846.t1 MTR_7g079440 22.330 412 287 9 71 454 213 619 4.51e-19 90.9
MS.gene042846.t1 MTR_4g102310 22.595 447 299 15 40 453 39 471 5.85e-19 90.1
MS.gene042846.t1 MTR_4g029690 24.042 287 196 10 40 312 43 321 7.10e-19 87.8
MS.gene042846.t1 MTR_4g133750 24.416 471 314 15 12 454 14 470 7.81e-19 89.7
MS.gene042846.t1 MTR_5g094540 22.445 499 340 17 13 477 10 495 8.98e-19 89.4
MS.gene042846.t1 MTR_5g018990 24.843 479 307 20 39 477 34 499 9.54e-19 89.4
MS.gene042846.t1 MTR_3g057980 22.766 470 322 13 15 454 5 463 1.06e-18 89.0
MS.gene042846.t1 MTR_5g016440 22.154 492 326 16 13 467 6 477 3.41e-18 87.4
MS.gene042846.t1 MTR_5g094660 20.954 482 326 17 34 482 32 491 4.60e-18 87.0
MS.gene042846.t1 MTR_5g016410 22.986 509 322 19 9 477 5 483 5.09e-18 87.0
MS.gene042846.t1 MTR_4g025970 24.444 450 295 14 38 454 27 464 7.66e-18 86.7
MS.gene042846.t1 MTR_5g018980 25.221 452 281 20 39 447 33 470 7.98e-18 86.7
MS.gene042846.t1 MTR_4g048580 22.128 470 322 14 41 482 39 492 8.66e-18 86.3
MS.gene042846.t1 MTR_8g046210 23.237 482 323 16 6 454 6 473 9.35e-18 86.3
MS.gene042846.t1 MTR_2g073480 25.614 285 196 9 183 460 111 386 1.13e-17 85.5
MS.gene042846.t1 MTR_2g073440 25.614 285 196 9 183 460 178 453 1.73e-17 85.1
MS.gene042846.t1 MTR_5g073320 22.718 471 319 17 40 477 38 496 2.71e-17 84.7
MS.gene042846.t1 MTR_5g021390 24.597 496 304 21 3 454 11 480 2.83e-17 84.7
MS.gene042846.t1 MTR_5g095290 22.432 477 313 16 16 454 10 467 4.27e-17 84.3
MS.gene042846.t1 MTR_5g095220 22.737 453 289 16 30 454 18 437 5.73e-17 83.6
MS.gene042846.t1 MTR_4g109470 26.724 232 156 5 233 454 243 470 5.88e-17 84.0
MS.gene042846.t1 MTR_1g101040 24.860 358 240 11 118 454 138 487 7.55e-17 83.6
MS.gene042846.t1 MTR_4g094772 24.948 481 277 22 25 461 18 458 9.22e-17 83.2
MS.gene042846.t1 MTR_0171s0020 22.998 487 316 17 9 454 7 475 1.02e-16 83.2
MS.gene042846.t1 MTR_0171s0010 28.643 199 132 4 257 454 288 477 1.06e-16 83.2
MS.gene042846.t1 MTR_4g071710 24.664 223 155 5 233 454 270 480 1.47e-16 82.8
MS.gene042846.t1 MTR_3g058210 22.899 476 306 18 20 454 15 470 1.64e-16 82.4
MS.gene042846.t1 MTR_5g045250 28.444 225 147 6 237 453 268 486 1.90e-16 82.4
MS.gene042846.t1 MTR_1g103670 20.704 483 328 16 5 454 4 464 1.92e-16 82.0
MS.gene042846.t1 MTR_8g063280 21.730 474 334 11 8 454 4 467 4.28e-16 81.3
MS.gene042846.t1 MTR_7g012860 22.222 450 308 13 36 454 29 467 5.01e-16 80.9
MS.gene042846.t1 MTR_0287s0060 22.222 450 308 13 36 454 29 467 5.01e-16 80.9
MS.gene042846.t1 MTR_5g095260 23.160 462 297 15 29 454 29 468 8.68e-16 80.1
MS.gene042846.t1 MTR_1g055325 27.935 247 165 7 220 460 252 491 9.85e-16 80.1
MS.gene042846.t1 MTR_0147s0030 25.269 372 214 15 120 452 155 501 1.16e-15 79.7
MS.gene042846.t1 MTR_3g057860 22.747 466 312 18 11 442 8 459 1.28e-15 79.7
MS.gene042846.t1 MTR_7g103450 22.996 474 295 16 28 454 34 484 1.33e-15 79.7
MS.gene042846.t1 MTR_5g045770 23.608 449 299 14 38 454 27 463 3.21e-15 78.2
MS.gene042846.t1 MTR_8g008530 25.485 412 261 17 74 453 93 490 3.35e-15 78.6
MS.gene042846.t1 MTR_2g073420 28.512 242 158 8 220 454 242 475 3.81e-15 78.2
MS.gene042846.t1 MTR_5g094520 27.189 217 139 7 272 482 215 418 3.93e-15 77.8
MS.gene042846.t1 MTR_2g437840 21.989 523 312 20 10 476 5 487 4.23e-15 78.2
MS.gene042846.t1 MTR_8g012590 27.948 229 151 6 262 480 274 498 4.79e-15 77.8
MS.gene042846.t1 MTR_4g062510 25.543 184 134 2 277 459 307 488 6.35e-15 77.4
MS.gene042846.t1 MTR_4g102280 22.038 422 274 15 72 453 71 477 7.26e-15 77.4
MS.gene042846.t1 MTR_8g036185 26.486 185 127 2 277 454 303 485 7.60e-15 77.4
MS.gene042846.t1 MTR_8g020960 21.457 494 309 18 9 454 11 473 8.18e-15 77.0
MS.gene042846.t1 MTR_3g051230 30.579 121 84 0 17 137 3 123 9.06e-15 72.4
MS.gene042846.t1 MTR_1g091010 23.542 480 311 21 8 454 5 461 1.27e-14 76.6
MS.gene042846.t1 MTR_3g025260 22.275 422 286 12 65 447 52 470 1.56e-14 76.3
MS.gene042846.t1 MTR_6g008640 22.222 459 294 19 41 447 40 487 1.75e-14 76.3
MS.gene042846.t1 MTR_2g437880 27.354 223 145 6 245 461 261 472 1.75e-14 76.3
MS.gene042846.t1 MTR_1g091023 24.229 454 282 22 39 454 33 462 3.14e-14 75.1
MS.gene042846.t1 MTR_4g088400 24.062 453 288 22 39 447 44 484 4.86e-14 74.7
MS.gene042846.t1 MTR_8g468780 23.239 284 199 6 179 453 131 404 5.10e-14 74.3
MS.gene042846.t1 MTR_1g015860 26.316 190 135 3 267 455 314 499 9.75e-14 73.9
MS.gene042846.t1 MTR_7g079440 21.389 360 253 7 71 403 213 569 1.20e-13 73.6
MS.gene042846.t1 MTR_4g026050 22.472 445 303 12 41 454 30 463 1.28e-13 73.6
MS.gene042846.t1 MTR_6g035115 22.296 453 295 14 32 447 29 461 1.33e-13 73.2
MS.gene042846.t1 MTR_7g029275 20.508 512 340 20 16 480 17 508 1.61e-13 73.2
MS.gene042846.t1 MTR_6g034965 23.207 474 312 17 12 454 14 466 2.33e-13 72.4
MS.gene042846.t1 MTR_0025s0110 28.054 221 147 5 238 454 286 498 2.34e-13 72.8
MS.gene042846.t1 MTR_8g076290 22.042 431 285 16 41 434 36 452 2.59e-13 72.4
MS.gene042846.t1 MTR_2g061200 26.257 179 128 2 277 454 326 501 2.75e-13 72.4
MS.gene042846.t1 MTR_5g014230 38.554 83 43 3 387 468 1 76 2.92e-13 66.6
MS.gene042846.t1 MTR_8g098565 26.178 191 135 4 272 457 289 478 4.25e-13 71.6
MS.gene042846.t1 MTR_1g103680 23.409 487 310 17 14 463 17 477 4.49e-13 71.6
MS.gene042846.t1 MTR_3g020780 19.794 485 337 12 9 454 7 478 4.55e-13 71.6
MS.gene042846.t1 MTR_4g062500 25.946 185 132 3 277 459 303 484 5.52e-13 71.6
MS.gene042846.t1 MTR_5g023680 23.937 447 296 13 40 454 5 439 6.31e-13 71.2
MS.gene042846.t1 MTR_5g094840 22.318 466 325 14 15 454 19 473 6.70e-13 71.2
MS.gene042846.t1 MTR_4g077210 22.196 428 292 14 69 463 59 478 7.52e-13 70.9
MS.gene042846.t1 MTR_5g070850 23.218 491 297 18 8 447 7 468 8.87e-13 70.9
MS.gene042846.t1 MTR_8g469300 27.419 186 131 3 269 453 291 473 9.35e-13 70.9
MS.gene042846.t1 MTR_5g018500 28.283 198 130 6 296 484 1 195 1.24e-12 67.0
MS.gene042846.t1 MTR_2g010250 25.131 191 138 3 268 454 286 475 1.45e-12 70.1
MS.gene042846.t1 MTR_7g075540 27.807 187 125 5 270 453 287 466 1.61e-12 70.1
MS.gene042846.t1 MTR_8g080520 20.309 453 292 14 43 453 70 495 1.73e-12 70.1
MS.gene042846.t1 MTR_2g010290 25.381 197 130 4 268 454 313 502 1.90e-12 69.7
MS.gene042846.t1 MTR_1g107295 25.137 183 133 2 277 459 308 486 1.99e-12 69.7
MS.gene042846.t1 MTR_5g094510 27.397 219 121 7 269 482 47 232 2.01e-12 67.8
MS.gene042846.t1 MTR_5g019140 21.627 541 325 21 10 480 19 530 2.04e-12 69.7
MS.gene042846.t1 MTR_4g088425 23.904 456 293 23 29 447 30 468 2.17e-12 69.7
MS.gene042846.t1 MTR_2g010320 25.000 192 139 3 267 454 283 473 2.61e-12 69.3
MS.gene042846.t1 MTR_1g107300 25.581 172 124 2 288 459 7 174 3.16e-12 66.2
MS.gene042846.t1 MTR_1g085680 22.248 436 284 19 58 453 67 487 3.99e-12 68.9
MS.gene042846.t1 MTR_3g014880 21.643 499 314 20 10 447 8 490 5.66e-12 68.2
MS.gene042846.t1 MTR_8g035760 23.844 411 263 19 90 460 88 488 7.24e-12 67.8
MS.gene042846.t1 MTR_5g009110 26.471 204 121 6 274 451 190 390 7.43e-12 67.4
MS.gene042846.t1 MTR_6g008430 21.935 465 290 21 38 447 36 482 7.53e-12 67.8
MS.gene042846.t1 MTR_3g024520 25.556 180 130 3 277 454 296 473 8.25e-12 67.8
MS.gene042846.t1 MTR_7g028020 20.936 406 287 11 70 444 57 459 9.32e-12 67.8
MS.gene042846.t1 MTR_5g009110 26.471 204 121 6 274 451 338 538 1.01e-11 67.8
MS.gene042846.t1 MTR_2g105360 23.504 468 276 20 39 454 32 469 1.05e-11 67.4
MS.gene042846.t1 MTR_1g090987 32.800 125 77 4 332 454 31 150 1.12e-11 63.9
MS.gene042846.t1 MTR_3g025230 25.000 180 131 3 277 454 296 473 1.24e-11 67.0
MS.gene042846.t1 MTR_5g070700 28.022 182 120 6 277 454 297 471 1.77e-11 66.6
MS.gene042846.t1 MTR_7g027960 21.324 408 283 12 70 444 57 459 2.04e-11 66.6
MS.gene042846.t1 MTR_5g070830 26.923 182 122 6 277 454 407 581 2.25e-11 66.6
MS.gene042846.t1 MTR_8g469360 23.161 367 230 14 120 453 48 395 3.11e-11 65.5
MS.gene042846.t1 MTR_4g119660 21.257 541 327 22 10 480 4 515 3.49e-11 65.9
MS.gene042846.t1 MTR_8g042060 21.898 411 253 12 69 454 93 460 4.46e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042846.t1 AT1G73340 70.146 479 130 3 6 483 17 483 0.0 719
MS.gene042846.t1 AT3G50660 32.577 485 290 5 30 479 29 511 1.20e-104 322
MS.gene042846.t1 AT5G05690 34.459 444 282 4 40 480 31 468 1.19e-97 303
MS.gene042846.t1 AT3G13730 32.294 449 288 6 39 479 50 490 7.20e-96 298
MS.gene042846.t1 AT4G36380 33.040 454 287 7 40 483 69 515 3.07e-94 295
MS.gene042846.t1 AT3G13730 32.701 422 269 5 39 452 50 464 1.19e-92 289
MS.gene042846.t1 AT3G50660 32.673 404 244 3 30 405 29 432 2.01e-87 275
MS.gene042846.t1 AT5G14400 35.613 424 236 8 46 461 2 396 5.57e-87 273
MS.gene042846.t1 AT5G14400 35.096 416 234 7 46 453 2 389 1.38e-84 266
MS.gene042846.t1 AT1G12740 31.659 458 298 5 32 482 23 472 1.13e-83 266
MS.gene042846.t1 AT1G12740 31.670 461 294 6 35 482 26 478 1.71e-81 261
MS.gene042846.t1 AT1G12740 31.670 461 294 6 35 482 26 478 3.35e-81 260
MS.gene042846.t1 AT3G30180 30.998 471 300 7 10 475 10 460 4.15e-81 259
MS.gene042846.t1 AT5G05690 34.048 373 241 3 40 409 31 401 6.01e-78 249
MS.gene042846.t1 AT5G38970 31.210 471 299 8 10 475 10 460 2.37e-77 249
MS.gene042846.t1 AT4G19230 29.645 479 310 10 12 480 1 462 5.17e-72 236
MS.gene042846.t1 AT5G14400 35.135 370 203 8 100 461 2 342 4.48e-71 230
MS.gene042846.t1 AT4G19230 29.935 461 297 9 12 463 1 444 1.06e-70 233
MS.gene042846.t1 AT5G45340 28.958 480 319 10 4 480 2 462 3.19e-70 231
MS.gene042846.t1 AT3G19270 29.258 458 297 10 5 454 1 439 1.91e-68 226
MS.gene042846.t1 AT5G45340 28.788 462 308 9 4 463 2 444 3.50e-68 225
MS.gene042846.t1 AT3G19270 29.295 454 300 9 5 453 1 438 2.06e-67 223
MS.gene042846.t1 AT5G38970 31.026 390 255 4 94 478 2 382 7.03e-66 217
MS.gene042846.t1 AT5G38970 31.026 390 255 4 94 478 2 382 7.03e-66 217
MS.gene042846.t1 AT5G05690 31.268 355 235 4 129 480 1 349 2.34e-65 215
MS.gene042846.t1 AT5G14400 34.043 329 208 4 46 367 2 328 8.90e-64 210
MS.gene042846.t1 AT2G29090 27.964 447 301 8 39 478 48 480 3.99e-63 213
MS.gene042846.t1 AT2G29090 27.964 447 301 8 39 478 48 480 3.99e-63 213
MS.gene042846.t1 AT1G55940 25.820 488 343 8 5 479 10 491 2.69e-61 209
MS.gene042846.t1 AT1G55940 26.522 460 319 8 5 451 10 463 8.08e-61 206
MS.gene042846.t1 AT4G36380 30.769 338 224 3 40 368 69 405 8.33e-61 205
MS.gene042846.t1 AT2G32440 28.105 459 305 10 9 452 10 458 4.49e-59 202
MS.gene042846.t1 AT2G32440 28.105 459 305 10 9 452 10 458 4.49e-59 202
MS.gene042846.t1 AT5G38970 29.500 400 263 6 10 404 10 395 6.77e-58 197
MS.gene042846.t1 AT3G44970 28.571 455 306 7 35 479 30 475 4.49e-57 197
MS.gene042846.t1 AT1G05160 26.106 452 312 9 40 479 45 486 2.59e-56 195
MS.gene042846.t1 AT1G05160 26.106 452 312 9 40 479 45 486 2.59e-56 195
MS.gene042846.t1 AT4G15300 27.009 448 311 9 10 453 8 443 1.53e-55 192
MS.gene042846.t1 AT1G65670 26.667 450 306 9 10 453 8 439 3.57e-55 192
MS.gene042846.t1 AT4G15300 26.966 445 309 9 13 453 1 433 7.86e-55 191
MS.gene042846.t1 AT1G19630 26.915 483 326 12 10 480 8 475 1.43e-54 190
MS.gene042846.t1 AT4G15393 26.407 462 316 10 12 461 1 450 4.32e-54 189
MS.gene042846.t1 AT4G15396 25.966 466 321 9 4 461 3 452 8.07e-54 188
MS.gene042846.t1 AT1G12740 29.532 342 235 4 35 371 26 366 1.77e-53 184
MS.gene042846.t1 AT2G29090 27.226 393 269 7 93 478 3 385 3.23e-53 184
MS.gene042846.t1 AT5G36110 27.626 438 297 8 29 456 23 450 2.01e-52 184
MS.gene042846.t1 AT4G15396 25.983 458 315 9 4 453 3 444 3.01e-52 183
MS.gene042846.t1 AT2G42850 28.972 428 285 7 40 459 45 461 3.12e-51 181
MS.gene042846.t1 AT1G19630 26.374 455 314 10 10 456 8 449 1.32e-50 179
MS.gene042846.t1 AT1G78490 28.176 433 300 8 35 461 30 457 6.72e-50 177
MS.gene042846.t1 AT5G48000 27.093 454 308 9 38 479 33 475 2.29e-49 176
MS.gene042846.t1 AT5G48000 27.093 454 308 9 38 479 33 475 2.29e-49 176
MS.gene042846.t1 AT5G48000 27.093 454 308 9 38 479 33 475 2.29e-49 176
MS.gene042846.t1 AT5G48000 27.093 454 308 9 38 479 33 475 2.29e-49 176
MS.gene042846.t1 AT5G48000 27.093 454 308 9 38 479 33 475 2.29e-49 176
MS.gene042846.t1 AT5G48000 27.093 454 308 9 38 479 33 475 2.29e-49 176
MS.gene042846.t1 AT5G48000 27.133 457 310 9 35 479 71 516 7.27e-49 176
MS.gene042846.t1 AT4G15396 24.893 466 305 9 4 461 3 431 2.65e-47 170
MS.gene042846.t1 AT4G15300 25.696 467 309 11 13 453 1 455 4.38e-47 170
MS.gene042846.t1 AT4G15310 27.473 455 304 12 11 453 6 446 1.92e-44 162
MS.gene042846.t1 AT3G30290 27.273 385 267 8 78 458 3 378 1.70e-42 156
MS.gene042846.t1 AT4G15396 25.000 408 287 7 4 403 3 399 2.29e-42 155
MS.gene042846.t1 AT4G15393 25.248 404 283 8 12 403 1 397 3.74e-42 155
MS.gene042846.t1 AT1G19630 25.124 402 288 8 10 403 8 404 3.58e-40 150
MS.gene042846.t1 AT1G78490 26.400 375 270 5 35 403 30 404 1.20e-37 143
MS.gene042846.t1 AT2G42850 29.360 344 232 6 40 375 45 385 6.81e-36 137
MS.gene042846.t1 AT5G36110 26.879 346 240 6 40 375 34 376 8.28e-36 137
MS.gene042846.t1 AT4G15393 24.257 404 254 8 12 403 1 364 9.16e-36 136
MS.gene042846.t1 AT2G29090 25.540 278 199 4 39 313 48 320 6.64e-29 117
MS.gene042846.t1 AT5G36140 25.263 285 198 4 40 315 33 311 2.61e-27 112
MS.gene042846.t1 AT3G10560 24.255 470 316 16 17 453 18 480 8.78e-24 104
MS.gene042846.t1 AT1G74550 23.830 470 306 15 12 453 3 448 1.45e-22 100
MS.gene042846.t1 AT2G45550 21.757 478 328 12 11 454 9 474 1.91e-22 100
MS.gene042846.t1 AT3G44970 23.824 319 229 5 35 343 30 344 2.35e-22 99.0
MS.gene042846.t1 AT5G57220 23.899 477 305 19 13 456 4 455 4.11e-21 96.7
MS.gene042846.t1 AT4G37430 23.154 501 314 18 12 469 5 477 4.63e-21 96.3
MS.gene042846.t1 AT4G37400 24.941 421 279 14 65 456 49 461 4.07e-20 93.6
MS.gene042846.t1 AT2G45560 21.192 453 309 14 40 457 38 477 1.24e-19 92.0
MS.gene042846.t1 AT5G04630 21.474 475 335 14 11 453 8 476 2.48e-19 91.3
MS.gene042846.t1 AT4G37410 24.029 412 274 14 76 458 62 463 3.80e-19 90.5
MS.gene042846.t1 AT1G74540 28.218 202 134 5 257 453 259 454 2.95e-18 87.8
MS.gene042846.t1 AT4G37370 25.448 279 180 9 195 459 198 462 3.00e-18 87.8
MS.gene042846.t1 AT2G45580 27.660 188 127 4 269 454 141 321 3.06e-18 86.7
MS.gene042846.t1 AT1G31800 20.588 442 313 13 71 480 134 569 3.61e-18 87.8
MS.gene042846.t1 AT5G67310 23.368 475 313 16 13 455 15 470 3.97e-18 87.4
MS.gene042846.t1 AT2G45580 27.660 188 127 4 269 454 295 475 6.16e-18 87.0
MS.gene042846.t1 AT5G07990 23.158 475 326 14 11 454 3 469 9.24e-18 86.3
MS.gene042846.t1 AT3G48520 22.763 514 330 22 10 480 10 499 1.18e-17 85.9
MS.gene042846.t1 AT3G28740 28.079 203 133 5 268 468 289 480 1.69e-17 85.5
MS.gene042846.t1 AT2G28860 20.190 421 301 13 84 480 79 488 2.29e-17 85.1
MS.gene042846.t1 AT2G45570 21.412 425 294 9 64 454 57 475 2.30e-17 85.1
MS.gene042846.t1 AT2G34490 22.716 405 245 14 118 480 114 492 3.32e-17 84.7
MS.gene042846.t1 AT3G26270 23.617 470 306 20 26 458 20 473 3.44e-17 84.7
MS.gene042846.t1 AT1G11680 23.094 459 314 14 14 451 14 454 6.15e-17 83.6
MS.gene042846.t1 AT4G15380 27.193 228 156 4 236 458 256 478 1.09e-16 83.2
MS.gene042846.t1 AT1G33730 28.042 189 128 4 268 454 156 338 3.95e-16 80.5
MS.gene042846.t1 AT1G33730 28.042 189 128 4 268 454 156 338 3.95e-16 80.5
MS.gene042846.t1 AT4G12300 21.946 483 310 16 15 454 20 478 4.08e-16 81.3
MS.gene042846.t1 AT3G20950 21.063 489 321 14 11 454 14 482 4.87e-16 81.3
MS.gene042846.t1 AT4G13770 20.925 454 319 11 14 436 4 448 5.03e-16 80.9
MS.gene042846.t1 AT3G26170 30.570 193 120 6 269 454 283 468 5.21e-16 80.9
MS.gene042846.t1 AT4G37360 28.342 187 123 4 274 459 287 463 5.91e-16 80.9
MS.gene042846.t1 AT2G28850 19.906 427 295 13 84 480 79 488 6.75e-16 80.5
MS.gene042846.t1 AT2G40890 21.784 482 319 16 8 453 2 461 8.07e-16 80.5
MS.gene042846.t1 AT2G26710 22.000 500 322 17 3 451 2 484 8.56e-16 80.5
MS.gene042846.t1 AT5G25140 20.083 483 323 14 9 454 4 460 8.59e-16 80.1
MS.gene042846.t1 AT3G25180 23.179 453 254 16 72 475 68 475 9.31e-16 80.1
MS.gene042846.t1 AT3G26180 26.562 256 152 9 203 454 111 334 1.19e-15 79.0
MS.gene042846.t1 AT3G48300 21.245 466 306 20 29 459 19 458 1.31e-15 79.7
MS.gene042846.t1 AT3G48300 21.245 466 306 20 29 459 21 460 1.32e-15 79.7
MS.gene042846.t1 AT1G66540 26.042 192 129 5 274 463 115 295 1.37e-15 78.2
MS.gene042846.t1 AT3G26230 29.474 190 124 4 275 460 289 472 1.42e-15 79.7
MS.gene042846.t1 AT2G42250 27.473 182 125 3 280 456 303 482 1.67e-15 79.3
MS.gene042846.t1 AT3G48280 20.553 506 331 22 10 475 1 475 2.02e-15 79.0
MS.gene042846.t1 AT1G66540 26.042 192 129 5 274 463 174 354 2.16e-15 78.2
MS.gene042846.t1 AT3G48320 23.077 481 298 21 10 454 12 456 2.71e-15 78.6
MS.gene042846.t1 AT5G25180 22.851 477 295 17 22 454 13 460 4.27e-15 78.2
MS.gene042846.t1 AT1G33720 21.179 458 319 9 29 454 27 474 4.37e-15 78.2
MS.gene042846.t1 AT3G10570 20.286 419 296 11 67 453 68 480 8.94e-15 77.0
MS.gene042846.t1 AT5G35715 25.912 274 180 9 190 447 134 400 9.14e-15 76.6
MS.gene042846.t1 AT5G04330 27.933 179 118 4 275 447 295 468 1.27e-14 76.6
MS.gene042846.t1 AT3G26150 30.435 184 117 5 275 454 292 468 1.31e-14 76.6
MS.gene042846.t1 AT3G26180 26.667 255 151 9 204 454 246 468 1.68e-14 76.3
MS.gene042846.t1 AT5G04660 21.002 419 294 11 67 453 66 479 1.89e-14 76.3
MS.gene042846.t1 AT5G36130 30.496 141 89 3 337 475 1 134 2.21e-14 70.9
MS.gene042846.t1 AT1G33720 26.596 188 132 3 268 454 160 342 2.62e-14 75.1
MS.gene042846.t1 AT1G33720 26.596 188 132 3 268 454 160 342 2.62e-14 75.1
MS.gene042846.t1 AT1G33720 26.596 188 132 3 268 454 160 342 2.62e-14 75.1
MS.gene042846.t1 AT4G37310 20.000 485 331 13 11 455 4 471 2.62e-14 75.5
MS.gene042846.t1 AT4G15360 26.203 187 132 4 277 462 301 482 2.75e-14 75.5
MS.gene042846.t1 AT3G01900 21.304 460 308 17 54 480 52 490 2.99e-14 75.5
MS.gene042846.t1 AT4G36220 27.027 185 127 4 272 454 304 482 3.17e-14 75.5
MS.gene042846.t1 AT5G10600 27.320 194 133 3 274 466 302 488 3.31e-14 75.5
MS.gene042846.t1 AT5G42580 20.678 295 221 5 170 454 172 463 7.00e-14 74.3
MS.gene042846.t1 AT4G31940 30.366 191 122 6 264 447 298 484 7.82e-14 74.3
MS.gene042846.t1 AT4G31950 32.370 173 106 6 282 447 304 472 8.03e-14 73.9
MS.gene042846.t1 AT5G10610 27.500 200 135 5 268 465 280 471 8.08e-14 73.9
MS.gene042846.t1 AT5G25120 19.792 480 328 16 9 454 4 460 8.22e-14 73.9
MS.gene042846.t1 AT3G32047 24.876 201 144 3 269 467 292 487 9.87e-14 73.9
MS.gene042846.t1 AT3G20080 26.842 190 132 4 277 463 165 350 1.36e-13 72.8
MS.gene042846.t1 AT3G20080 26.842 190 132 4 277 463 165 350 1.36e-13 72.8
MS.gene042846.t1 AT3G20080 26.842 190 132 4 277 463 165 350 1.36e-13 72.8
MS.gene042846.t1 AT3G20080 26.842 190 132 4 277 463 165 350 1.36e-13 72.8
MS.gene042846.t1 AT3G20120 23.810 189 136 3 269 453 156 340 1.40e-13 72.8
MS.gene042846.t1 AT3G20120 23.810 189 136 3 269 453 156 340 1.40e-13 72.8
MS.gene042846.t1 AT3G20120 23.810 189 136 3 269 453 156 340 1.40e-13 72.8
MS.gene042846.t1 AT3G20090 25.532 188 135 3 269 454 157 341 1.69e-13 72.4
MS.gene042846.t1 AT3G48310 20.860 465 306 18 29 458 23 460 1.93e-13 72.8
MS.gene042846.t1 AT2G14100 25.532 188 134 2 269 454 294 477 1.97e-13 72.8
MS.gene042846.t1 AT3G20120 23.858 197 141 4 269 461 292 483 2.42e-13 72.8
MS.gene042846.t1 AT5G06905 19.958 476 327 13 40 473 31 494 2.47e-13 72.8
MS.gene042846.t1 AT3G20935 26.012 173 124 2 284 454 134 304 3.83e-13 71.2
MS.gene042846.t1 AT3G20080 26.984 189 131 4 277 462 302 486 4.04e-13 72.0
MS.gene042846.t1 AT3G20080 26.984 189 131 4 277 462 302 486 4.04e-13 72.0
MS.gene042846.t1 AT2G30770 23.312 459 280 16 40 454 33 463 4.63e-13 71.6
MS.gene042846.t1 AT3G20090 25.532 188 135 3 269 454 295 479 5.13e-13 71.6
MS.gene042846.t1 AT3G26160 28.916 166 107 5 275 436 292 450 6.11e-13 71.2
MS.gene042846.t1 AT3G20960 23.874 222 160 4 236 453 157 373 9.22e-13 70.5
MS.gene042846.t1 AT5G24900 27.841 176 120 3 277 451 210 379 9.50e-13 70.5
MS.gene042846.t1 AT3G20960 23.874 222 160 4 236 453 260 476 1.02e-12 70.9
MS.gene042846.t1 AT1G64930 25.907 193 137 3 268 457 292 481 1.53e-12 70.1
MS.gene042846.t1 AT2G34500 21.708 281 197 7 215 480 215 487 1.75e-12 69.7
MS.gene042846.t1 AT3G20940 23.333 180 134 2 277 454 302 479 1.96e-12 69.7
MS.gene042846.t1 AT5G24900 27.841 176 120 3 277 451 327 496 1.97e-12 69.7
MS.gene042846.t1 AT1G13090 26.776 183 123 5 275 453 288 463 2.05e-12 69.7
MS.gene042846.t1 AT5G24910 27.273 176 121 3 277 451 332 501 2.29e-12 69.7
MS.gene042846.t1 AT2G25160 21.355 487 324 20 10 447 3 479 2.33e-12 69.7
MS.gene042846.t1 AT3G26830 25.000 204 137 6 275 474 288 479 2.55e-12 69.3
MS.gene042846.t1 AT4G13310 27.807 187 124 6 272 454 285 464 3.07e-12 68.9
MS.gene042846.t1 AT1G24540 20.909 440 298 16 86 480 86 520 4.10e-12 68.9
MS.gene042846.t1 AT2G46950 22.716 405 278 12 93 469 166 563 5.25e-12 68.6
MS.gene042846.t1 AT2G23190 26.804 194 129 5 268 459 325 507 6.15e-12 68.2
MS.gene042846.t1 AT3G56630 20.988 405 262 16 90 449 77 468 9.88e-12 67.4
MS.gene042846.t1 AT1G28430 23.661 224 164 3 236 454 255 476 1.12e-11 67.4
MS.gene042846.t1 AT5G24950 28.492 179 119 6 280 454 290 463 1.95e-11 66.6
MS.gene042846.t1 AT1G34540 24.783 230 162 6 243 462 253 481 2.64e-11 66.2
MS.gene042846.t1 AT2G12190 23.438 256 177 5 238 481 252 500 3.57e-11 65.9

Find 85 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAATCTCTAAAAGATTT+TGG 0.137226 6.3:+66283603 None:intergenic
CATGCAGCCTATTTGGAAAA+TGG 0.161543 6.3:-66283701 MS.gene042846:CDS
GATTCTCTAAGGACTAATTT+TGG 0.206125 6.3:-66281804 MS.gene042846:CDS
ATTACTTTGTTACAAATTAT+AGG 0.221777 6.3:-66280491 MS.gene042846:intron
CTTGGAGAAGAATGACTTCT+TGG 0.233953 6.3:+66283430 None:intergenic
GCAGGTAGCTATAAATTTAA+TGG 0.250391 6.3:-66283309 MS.gene042846:intron
TTAATGGTTAATCAACTATT+AGG 0.253428 6.3:-66283293 MS.gene042846:CDS
CCTCCAAAGGGTGCATAAAA+TGG 0.261752 6.3:+66280573 None:intergenic
AAATGAACTGCTGAGATAAA+TGG 0.264118 6.3:+66280779 None:intergenic
TCACTTACACACTGAGTAAA+TGG 0.284091 6.3:+66281744 None:intergenic
ATCATCAATCTTCTATTTGC+TGG 0.284436 6.3:-66282264 MS.gene042846:CDS
GACTTGGTGGCATTGCAATT+TGG 0.310036 6.3:-66281538 MS.gene042846:CDS
TTATGAAGGAAAAGAGAAAT+TGG 0.313753 6.3:-66280605 MS.gene042846:intron
AGAAGCTGCTCCATGGCATT+AGG 0.323140 6.3:+66282186 None:intergenic
GGAACCACAAAACATCCTTT+TGG 0.325780 6.3:+66280800 None:intergenic
TTTGTATATCGTTCATGAAA+TGG 0.331398 6.3:+66283487 None:intergenic
TCCTCAATTTGTTGAAGAAA+TGG 0.332131 6.3:-66284209 MS.gene042846:CDS
TAATGCCATGGAGCAGCTTC+TGG 0.337920 6.3:-66282184 MS.gene042846:intron
AAAGGCCAACCTCTCCTTCC+TGG 0.360202 6.3:+66284280 None:intergenic
CTTATCTAATCGCATCATAT+TGG 0.360450 6.3:+66283518 None:intergenic
CCCTCAGCTCGGTTAGTGAA+TGG 0.382876 6.3:-66280121 MS.gene042846:CDS
TTCTCTTGGACAGGATGAAC+AGG 0.393722 6.3:-66281826 MS.gene042846:intron
AGGAGAGGTTGGCCTTTGAT+AGG 0.397236 6.3:-66284274 MS.gene042846:CDS
GGAAACAAATGAAGGAAGAT+AGG 0.406930 6.3:-66280156 MS.gene042846:CDS
TTACCTTTCTACAAACATCT+TGG 0.410837 6.3:+66283412 None:intergenic
TCTCCAAGATGTTTGTAGAA+AGG 0.429524 6.3:-66283415 MS.gene042846:intron
ATGCAGCCTATTTGGAAAAT+GGG 0.433237 6.3:-66283700 MS.gene042846:CDS
GAAGCTGCTCCATGGCATTA+GGG 0.436799 6.3:+66282187 None:intergenic
ACCATTTCTTCAACAAATTG+AGG 0.439675 6.3:+66284208 None:intergenic
CCTCCAACAGAAGGTAATAA+TGG 0.446668 6.3:-66282345 MS.gene042846:CDS
CCATTATTACCTTCTGTTGG+AGG 0.456644 6.3:+66282345 None:intergenic
ATAGAGGTCCAGAGACAAAA+TGG 0.470328 6.3:-66282369 MS.gene042846:CDS
TGGCATTAGGGCATTGAGTA+AGG 0.483044 6.3:+66282199 None:intergenic
AAAATTTCAATCCTTGGAGA+TGG 0.483860 6.3:-66280730 MS.gene042846:CDS
TTCATACCACACTGCTATGA+AGG 0.485579 6.3:-66283177 MS.gene042846:intron
AAGTCTGCAACAGCATCATC+TGG 0.488461 6.3:+66282288 None:intergenic
AGGATGAACAGGATTCTCTA+AGG 0.491747 6.3:-66281815 MS.gene042846:CDS
ACACCATTATTACCTTCTGT+TGG 0.494158 6.3:+66282342 None:intergenic
AGAAGAATTTCTTACATGGC+AGG 0.496254 6.3:-66281781 MS.gene042846:CDS
AATGGCGTGATTACAGTTCA+AGG 0.497135 6.3:-66283573 MS.gene042846:CDS
GAAGGTAATAATGGTGTACT+TGG 0.498281 6.3:-66282336 MS.gene042846:CDS
TGATAGGTGACAGTATCAAT+TGG 0.505310 6.3:-66284258 MS.gene042846:CDS
TGAAGAGCCAGGGATGTTGA+TGG 0.506248 6.3:+66283196 None:intergenic
TTTCAATCCTTGGAGATGGA+TGG 0.506285 6.3:-66280726 MS.gene042846:CDS
CGAGTCTCAAGTGAATGAAA+TGG 0.507305 6.3:-66283261 MS.gene042846:CDS
AAGTAATTCAAATCAAGAAA+AGG 0.511104 6.3:-66284333 MS.gene042846:CDS
TGCCACCAGGAAGGAGAGGT+TGG 0.529134 6.3:-66284285 MS.gene042846:CDS
GATGAAACACTTAGACTTGG+TGG 0.531512 6.3:-66281551 MS.gene042846:CDS
AGCAGTTCATTTAGATGAGA+AGG 0.532092 6.3:-66280768 MS.gene042846:CDS
TCCGTTCCCATCAACATCCC+TGG 0.534317 6.3:-66283203 MS.gene042846:CDS
GCAGTGTGGTATGAAGAGCC+AGG 0.536000 6.3:+66283185 None:intergenic
TGTACTTGGAAGACTAATAG+AGG 0.536543 6.3:-66282322 MS.gene042846:CDS
TACTCAATGCCCTAATGCCA+TGG 0.545078 6.3:-66282196 MS.gene042846:CDS
AAATCTAGCACCTCCTCCAA+AGG 0.546715 6.3:+66280560 None:intergenic
ATGGATGGAACCTGAAAATG+AGG 0.553125 6.3:-66280711 MS.gene042846:intron
CAACAGATGGAAACAAATGA+AGG 0.553269 6.3:-66280164 MS.gene042846:intron
AGGCGAGCTAGTTCAGCTCC+AGG 0.561941 6.3:+66280534 None:intergenic
GAGAAAATATTTCAGAAACA+TGG 0.568818 6.3:-66284399 MS.gene042846:CDS
AATCTAGCACCTCCTCCAAA+GGG 0.570397 6.3:+66280561 None:intergenic
CCATTCACTAACCGAGCTGA+GGG 0.577408 6.3:+66280121 None:intergenic
CAGTTCAAGGAGAGCAACAA+AGG 0.577934 6.3:-66283560 MS.gene042846:CDS
TCAGGTTCCATCCATCTCCA+AGG 0.578285 6.3:+66280719 None:intergenic
TTGGAGAAGAATTTCTTACA+TGG 0.579059 6.3:-66281785 MS.gene042846:CDS
GCCAGGGATGTTGATGGGAA+CGG 0.581255 6.3:+66283202 None:intergenic
GAAGAGCCAGGGATGTTGAT+GGG 0.585544 6.3:+66283197 None:intergenic
GCCATTCACTAACCGAGCTG+AGG 0.588963 6.3:+66280120 None:intergenic
ATTGATGAAACACTTAGACT+TGG 0.589739 6.3:-66281554 MS.gene042846:CDS
AGCATAGGCAGATTGCCACC+AGG 0.592540 6.3:-66284298 MS.gene042846:CDS
AGGAAGGAAGATAAAAGCAT+AGG 0.594426 6.3:-66284313 MS.gene042846:CDS
AGATTGCCACCAGGAAGGAG+AGG 0.600467 6.3:-66284289 MS.gene042846:CDS
ATTACAAAACGATTGAAGCT+CGG 0.600491 6.3:+66283660 None:intergenic
GAGCAACAAAGGAAACTACA+TGG 0.605256 6.3:-66283549 MS.gene042846:CDS
CAAAATGGTCCTCCAACAGA+AGG 0.615753 6.3:-66282354 MS.gene042846:CDS
TTGATACTGTCACCTATCAA+AGG 0.616128 6.3:+66284262 None:intergenic
ATTTCTTCAACAAATTGAGG+AGG 0.616451 6.3:+66284211 None:intergenic
CCTATTTGGAAAATGGGCAG+TGG 0.617335 6.3:-66283694 MS.gene042846:CDS
TAAAATAAACAAGATCATAG+AGG 0.623444 6.3:-66282385 MS.gene042846:CDS
AATTCAAATCAAGAAAAGGA+AGG 0.625285 6.3:-66284329 MS.gene042846:CDS
ACATACCAGAAGCTGCTCCA+TGG 0.626766 6.3:+66282179 None:intergenic
CAGTGTGGTATGAAGAGCCA+GGG 0.630530 6.3:+66283186 None:intergenic
TAGGCAGATTGCCACCAGGA+AGG 0.636061 6.3:-66284294 MS.gene042846:CDS
TTGTTGAAGAAATGGTGCAA+AGG 0.636433 6.3:-66284201 MS.gene042846:intron
AAAGAAGACATTCAATACCA+AGG 0.657807 6.3:-66281500 MS.gene042846:intron
GGCCAACCTCTCCTTCCTGG+TGG 0.718998 6.3:+66284283 None:intergenic
ATCGTACCTTCATAGCAGTG+TGG 0.752782 6.3:+66283171 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGTATAATATTAATC+AGG + chr6.3:66283479-66283498 None:intergenic 10.0%
!! GATAATAATTAATTTATAGT+TGG - chr6.3:66282842-66282861 MS.gene042846:intron 10.0%
!! TTATACTTACATATATTAAT+AGG + chr6.3:66283158-66283177 None:intergenic 10.0%
!!! ATTTTGAAATATTAATAATG+TGG - chr6.3:66283506-66283525 MS.gene042846:CDS 10.0%
!! AATATGTAGTTAATTATGTT+TGG + chr6.3:66284167-66284186 None:intergenic 15.0%
!! ATTACTTTGTTACAAATTAT+AGG - chr6.3:66283984-66284003 MS.gene042846:intron 15.0%
!! TAAACATTAATCAAAATCAA+TGG + chr6.3:66281781-66281800 None:intergenic 15.0%
!! TAATGAGTCAATATATAATT+TGG + chr6.3:66283572-66283591 None:intergenic 15.0%
!! TAATTAACTACATATTAGAT+CGG - chr6.3:66284171-66284190 MS.gene042846:intron 15.0%
!! TTAATCGATTAATCTTATAA+GGG - chr6.3:66281946-66281965 MS.gene042846:intron 15.0%
!!! AATTGTTTTCTTAATTGTTA+TGG - chr6.3:66283841-66283860 MS.gene042846:intron 15.0%
!!! ATGTATTTGATAACATATTT+AGG - chr6.3:66283434-66283453 MS.gene042846:CDS 15.0%
!!! ATTGACGTTATTTAATTTAA+GGG - chr6.3:66281834-66281853 MS.gene042846:intron 15.0%
!!! GCAATTTTAAAGATAATTTT+GGG - chr6.3:66280410-66280429 MS.gene042846:intron 15.0%
!!! TGCAATTTTAAAGATAATTT+TGG - chr6.3:66280409-66280428 MS.gene042846:intron 15.0%
!!! TGTATTTGATAACATATTTA+GGG - chr6.3:66283435-66283454 MS.gene042846:CDS 15.0%
!! AAATGTTGTTAGAAAGTAAA+TGG + chr6.3:66281093-66281112 None:intergenic 20.0%
!! AAGTAATTCAAATCAAGAAA+AGG - chr6.3:66280142-66280161 MS.gene042846:CDS 20.0%
!! ACGTGTTAATTAAATTACTT+AGG - chr6.3:66281993-66282012 MS.gene042846:intron 20.0%
!! ATTTCGATTTCATAAATTTG+AGG + chr6.3:66281630-66281649 None:intergenic 20.0%
!! ATTTGAGTAAATATACAAGT+TGG - chr6.3:66280316-66280335 MS.gene042846:intron 20.0%
!! GTTAATCGATTAATCTTATA+AGG - chr6.3:66281945-66281964 MS.gene042846:intron 20.0%
!! TAAAATAAACAAGATCATAG+AGG - chr6.3:66282090-66282109 MS.gene042846:intron 20.0%
!! TTAATGGTTAATCAACTATT+AGG - chr6.3:66281182-66281201 MS.gene042846:intron 20.0%
!! TTATTCACTAAAATGTTATG+TGG + chr6.3:66283795-66283814 None:intergenic 20.0%
!! TTGAAATATTAATAATGTGG+AGG - chr6.3:66283509-66283528 MS.gene042846:CDS 20.0%
!! TTGTATAATATTAATCAGGT+CGG + chr6.3:66283475-66283494 None:intergenic 20.0%
!! TTTGATTAATGTTTACTAAG+AGG - chr6.3:66281786-66281805 MS.gene042846:CDS 20.0%
!!! GATTGACGTTATTTAATTTA+AGG - chr6.3:66281833-66281852 MS.gene042846:intron 20.0%
! AAAATCGACAATAATTTGGA+TGG + chr6.3:66284203-66284222 None:intergenic 25.0%
! AAGCTAAAAATTTCAATCCT+TGG - chr6.3:66283739-66283758 MS.gene042846:intron 25.0%
! AATTCAAATCAAGAAAAGGA+AGG - chr6.3:66280146-66280165 MS.gene042846:CDS 25.0%
! ACATGAATGAATATCCAATT+TGG - chr6.3:66283216-66283235 MS.gene042846:CDS 25.0%
! ATAATTTGGTCCTAAATTGT+AGG + chr6.3:66283558-66283577 None:intergenic 25.0%
! ATGTAGTTAATTATGTTTGG+TGG + chr6.3:66284164-66284183 None:intergenic 25.0%
! ATTCTAACCATTGTTTATAG+AGG - chr6.3:66280531-66280550 MS.gene042846:CDS 25.0%
! ATTTCTGCAAATAATTCTCT+TGG - chr6.3:66282635-66282654 MS.gene042846:intron 25.0%
! CAACAAAATCGACAATAATT+TGG + chr6.3:66284207-66284226 None:intergenic 25.0%
! CATCGTTAATAATTTGAGAA+CGG - chr6.3:66284097-66284116 MS.gene042846:intron 25.0%
! CTACTCTCTTTATATATCAT+TGG + chr6.3:66281345-66281364 None:intergenic 25.0%
! GAACTATAATGACATTATGT+TGG - chr6.3:66283352-66283371 MS.gene042846:intron 25.0%
! GACTAAATTGATACTTGATA+TGG - chr6.3:66283531-66283550 MS.gene042846:CDS 25.0%
! GAGAAAATATTTCAGAAACA+TGG - chr6.3:66280076-66280095 MS.gene042846:CDS 25.0%
! GATGACTAATGAATATAACA+AGG + chr6.3:66284142-66284161 None:intergenic 25.0%
! GTAAATCATTCAAACATGTT+AGG + chr6.3:66284292-66284311 None:intergenic 25.0%
! GTCAATAATGAACATATTAG+TGG + chr6.3:66283060-66283079 None:intergenic 25.0%
! GTGGTACTAAATTTAGAAAA+AGG + chr6.3:66281690-66281709 None:intergenic 25.0%
! TAACAGATAAATCTTCCATT+TGG - chr6.3:66280729-66280748 MS.gene042846:CDS 25.0%
! TCTCAAATTATTAACGATGT+CGG + chr6.3:66284096-66284115 None:intergenic 25.0%
! TGAAACTAAGAGAATAATGT+CGG - chr6.3:66283400-66283419 MS.gene042846:intron 25.0%
! TTATGAAGGAAAAGAGAAAT+TGG - chr6.3:66283870-66283889 MS.gene042846:intron 25.0%
! TTCAAGTACTTCATATAAGA+TGG + chr6.3:66281480-66281499 None:intergenic 25.0%
! TTCTAACCATTGTTTATAGA+GGG - chr6.3:66280532-66280551 MS.gene042846:CDS 25.0%
! TTTGAATGATTTACAACAGA+TGG - chr6.3:66284298-66284317 MS.gene042846:CDS 25.0%
! TTTGTATATCGTTCATGAAA+TGG + chr6.3:66280991-66281010 None:intergenic 25.0%
!! ATGTAAGTTGAAATAACCTA+TGG - chr6.3:66282465-66282484 MS.gene042846:intron 25.0%
!! GTGTAAGTGATTAACATTTT+TGG - chr6.3:66282744-66282763 MS.gene042846:intron 25.0%
!! TGGTTAGAATGATTTTTACA+AGG + chr6.3:66280521-66280540 None:intergenic 25.0%
!! TTGTTTTCTGATTTTGTTGA+TGG - chr6.3:66281242-66281261 MS.gene042846:intron 25.0%
!!! AAATCTTTTAGAGATTTGGT+TGG - chr6.3:66280875-66280894 MS.gene042846:intron 25.0%
!!! ACCAAATCTCTAAAAGATTT+TGG + chr6.3:66280875-66280894 None:intergenic 25.0%
!!! TCCAAAATCTTTTAGAGATT+TGG - chr6.3:66280871-66280890 MS.gene042846:intron 25.0%
!!! TGAAATATTGATAATGTGTG+AGG + chr6.3:66280373-66280392 None:intergenic 25.0%
!!! TGATCATTTTGAAATGTTGT+TGG + chr6.3:66283280-66283299 None:intergenic 25.0%
!!! TTACTAAGAGGATATTTTGA+CGG - chr6.3:66281798-66281817 MS.gene042846:CDS 25.0%
!!! TTGCTATTTTGTAAATTCGA+GGG - chr6.3:66281863-66281882 MS.gene042846:intron 25.0%
!!! TTTGCTATTTTGTAAATTCG+AGG - chr6.3:66281862-66281881 MS.gene042846:intron 25.0%
AAAATTTCAATCCTTGGAGA+TGG - chr6.3:66283745-66283764 MS.gene042846:intron 30.0%
AAACTAAGAGAATAATGTCG+GGG - chr6.3:66283402-66283421 MS.gene042846:intron 30.0%
AAAGAAGACATTCAATACCA+AGG - chr6.3:66282975-66282994 MS.gene042846:intron 30.0%
AAATGAACTGCTGAGATAAA+TGG + chr6.3:66283699-66283718 None:intergenic 30.0%
AATTTAGTACCACAGTCTTA+AGG - chr6.3:66281697-66281716 MS.gene042846:intron 30.0%
ACCATTTCTTCAACAAATTG+AGG + chr6.3:66280270-66280289 None:intergenic 30.0%
ATCATCAATCTTCTATTTGC+TGG - chr6.3:66282211-66282230 MS.gene042846:CDS 30.0%
ATCATTCAAACATGTTAGGT+AGG + chr6.3:66284288-66284307 None:intergenic 30.0%
ATTACAAAACGATTGAAGCT+CGG + chr6.3:66280818-66280837 None:intergenic 30.0%
ATTGATGAAACACTTAGACT+TGG - chr6.3:66282921-66282940 MS.gene042846:intron 30.0%
ATTTCTTCAACAAATTGAGG+AGG + chr6.3:66280267-66280286 None:intergenic 30.0%
CAATTTGGTCATGAAAATGT+TGG - chr6.3:66283231-66283250 MS.gene042846:CDS 30.0%
CTTATCTAATCGCATCATAT+TGG + chr6.3:66280960-66280979 None:intergenic 30.0%
GAAAAATTTGCGCCTAATTA+TGG + chr6.3:66281530-66281549 None:intergenic 30.0%
GAAACTAAGAGAATAATGTC+GGG - chr6.3:66283401-66283420 MS.gene042846:intron 30.0%
GAAGAAAAAGAGCAATTTGA+AGG + chr6.3:66283964-66283983 None:intergenic 30.0%
GATACAGTTCTATACTTTCA+AGG - chr6.3:66280460-66280479 MS.gene042846:intron 30.0%
GATATTGATGTGACATTCTT+TGG - chr6.3:66282040-66282059 MS.gene042846:intron 30.0%
GCAGGTAGCTATAAATTTAA+TGG - chr6.3:66281166-66281185 MS.gene042846:intron 30.0%
TAAAACTGCAAGCCATAATT+AGG - chr6.3:66281515-66281534 MS.gene042846:CDS 30.0%
TCATATAAGATGGTTCTTGA+AGG + chr6.3:66281470-66281489 None:intergenic 30.0%
TGTGACATTCTTTGGATATT+AGG - chr6.3:66282048-66282067 MS.gene042846:intron 30.0%
TGTTATGGTCTCAATTATGA+AGG - chr6.3:66283856-66283875 MS.gene042846:intron 30.0%
TTACCTTTCTACAAACATCT+TGG + chr6.3:66281066-66281085 None:intergenic 30.0%
TTGATATGGTCCTACAATTT+AGG - chr6.3:66283545-66283564 MS.gene042846:CDS 30.0%
TTGCCAAATAGAGATTATAG+CGG - chr6.3:66280631-66280650 MS.gene042846:intron 30.0%
TTGGAGAAGAATTTCTTACA+TGG - chr6.3:66282690-66282709 MS.gene042846:intron 30.0%
TTTATACTCATAGCATATCG+CGG + chr6.3:66280608-66280627 None:intergenic 30.0%
TTTCATCAATAACCTGTTAG+TGG + chr6.3:66282911-66282930 None:intergenic 30.0%
! ATAAATCTTCCATTTGGCTT+AGG - chr6.3:66280735-66280754 MS.gene042846:CDS 30.0%
! ATATTTTCATGCAGCCTATT+TGG - chr6.3:66280767-66280786 MS.gene042846:CDS 30.0%
! CAACATTTTCATGACCAAAT+TGG + chr6.3:66283233-66283252 None:intergenic 30.0%
! CGTTTTGTAATGCAAAATGA+AGG - chr6.3:66280827-66280846 MS.gene042846:intron 30.0%
! TATTCCAAAAGGATGTTTTG+TGG - chr6.3:66283671-66283690 MS.gene042846:CDS 30.0%
! TTTGAAATGTTGTTGGTGTA+GGG + chr6.3:66283273-66283292 None:intergenic 30.0%
!! ACAAAAGAGTGTTAAGAAGT+CGG - chr6.3:66281380-66281399 MS.gene042846:intron 30.0%
!! AGAGATTTGGTTGGTAAAAA+TGG - chr6.3:66280884-66280903 MS.gene042846:intron 30.0%
!! AGGACTAATTTGATAATGCA+AGG - chr6.3:66280480-66280499 MS.gene042846:intron 30.0%
!! GATTCTCTAAGGACTAATTT+TGG - chr6.3:66282671-66282690 MS.gene042846:intron 30.0%
!! TCCTCAATTTGTTGAAGAAA+TGG - chr6.3:66280266-66280285 MS.gene042846:intron 30.0%
!! TCTTCAACTCAATTTTGATG+AGG - chr6.3:66282787-66282806 MS.gene042846:intron 30.0%
!!! GCAGATTTTGTTATTCCAAA+AGG - chr6.3:66283660-66283679 MS.gene042846:CDS 30.0%
!!! GCTTGCAGTTTTATTTGAAA+TGG + chr6.3:66281508-66281527 None:intergenic 30.0%
!!! TGCAAAAAGCATTGTTTTTG+TGG + chr6.3:66282248-66282267 None:intergenic 30.0%
!!! TTTTGAAATGTTGTTGGTGT+AGG + chr6.3:66283274-66283293 None:intergenic 30.0%
AACCATTGTTTATAGAGGGA+GGG - chr6.3:66280536-66280555 MS.gene042846:CDS 35.0%
AAGCACTTGCGAAATTTCTT+GGG + chr6.3:66282520-66282539 None:intergenic 35.0%
AATTTGAGAACGGTGGTTAA+TGG - chr6.3:66284107-66284126 MS.gene042846:intron 35.0%
ACAATGAAACCTTCACAAAC+TGG + chr6.3:66282883-66282902 None:intergenic 35.0%
ACACCATTATTACCTTCTGT+TGG + chr6.3:66282136-66282155 None:intergenic 35.0%
ACTCTCAAAATTGTGTACCT+TGG + chr6.3:66282995-66283014 None:intergenic 35.0%
AGAAGAATTTCTTACATGGC+AGG - chr6.3:66282694-66282713 MS.gene042846:intron 35.0%
AGCAGTTCATTTAGATGAGA+AGG - chr6.3:66283707-66283726 MS.gene042846:CDS 35.0%
ATCCATGCATGAACTGAATA+AGG + chr6.3:66282351-66282370 None:intergenic 35.0%
ATGCAGCCTATTTGGAAAAT+GGG - chr6.3:66280775-66280794 MS.gene042846:CDS 35.0%
ATTTGTGCATGATTCAATGC+AGG - chr6.3:66281148-66281167 MS.gene042846:intron 35.0%
CAACAGATGGAAACAAATGA+AGG - chr6.3:66284311-66284330 MS.gene042846:CDS 35.0%
CGTTAATAATTTGAGAACGG+TGG - chr6.3:66284100-66284119 MS.gene042846:intron 35.0%
GAAGGTAATAATGGTGTACT+TGG - chr6.3:66282139-66282158 MS.gene042846:intron 35.0%
GGAAACAAATGAAGGAAGAT+AGG - chr6.3:66284319-66284338 MS.gene042846:CDS 35.0%
GTACTTGAAATCGTAACAGT+CGG + chr6.3:66281899-66281918 None:intergenic 35.0%
TAACCATTGTTTATAGAGGG+AGG - chr6.3:66280535-66280554 MS.gene042846:CDS 35.0%
TAAGCACTTGCGAAATTTCT+TGG + chr6.3:66282521-66282540 None:intergenic 35.0%
TACTTGAAATCGTAACAGTC+GGG + chr6.3:66281898-66281917 None:intergenic 35.0%
TCAACTACAAGTCATACAAG+TGG + chr6.3:66284243-66284262 None:intergenic 35.0%
TCACTTACACACTGAGTAAA+TGG + chr6.3:66282734-66282753 None:intergenic 35.0%
TCTCCAAGATGTTTGTAGAA+AGG - chr6.3:66281060-66281079 MS.gene042846:intron 35.0%
TGATAGGTGACAGTATCAAT+TGG - chr6.3:66280217-66280236 MS.gene042846:intron 35.0%
TGCAAATAATTCTCTTGGAC+AGG - chr6.3:66282640-66282659 MS.gene042846:intron 35.0%
TGTACTTGGAAGACTAATAG+AGG - chr6.3:66282153-66282172 MS.gene042846:intron 35.0%
TTCCTTATTCAGTTCATGCA+TGG - chr6.3:66282346-66282365 MS.gene042846:CDS 35.0%
TTGATACTGTCACCTATCAA+AGG + chr6.3:66280216-66280235 None:intergenic 35.0%
TTGTTGAAGAAATGGTGCAA+AGG - chr6.3:66280274-66280293 MS.gene042846:intron 35.0%
! AGGAAGGAAGATAAAAGCAT+AGG - chr6.3:66280162-66280181 MS.gene042846:intron 35.0%
!! AAGGTACACAATTTTGAGAG+TGG - chr6.3:66282994-66283013 MS.gene042846:intron 35.0%
!! TACACAATTTTGAGAGTGGT+TGG - chr6.3:66282998-66283017 MS.gene042846:intron 35.0%
!!! TAAGAGGATATTTTGACGGA+GGG - chr6.3:66281802-66281821 MS.gene042846:CDS 35.0%
AATGGCGTGATTACAGTTCA+AGG - chr6.3:66280902-66280921 MS.gene042846:intron 40.0%
AGAAAACAGCGTTGTGATTG+TGG + chr6.3:66280710-66280729 None:intergenic 40.0%
AGCATAGAACCTTAAGACTG+TGG + chr6.3:66281709-66281728 None:intergenic 40.0%
AGGATGAACAGGATTCTCTA+AGG - chr6.3:66282660-66282679 MS.gene042846:intron 40.0%
ATAGAGGTCCAGAGACAAAA+TGG - chr6.3:66282106-66282125 MS.gene042846:intron 40.0%
ATGGATGGAACCTGAAAATG+AGG - chr6.3:66283764-66283783 MS.gene042846:intron 40.0%
CATGCAGCCTATTTGGAAAA+TGG - chr6.3:66280774-66280793 MS.gene042846:CDS 40.0%
CCATTATTACCTTCTGTTGG+AGG + chr6.3:66282133-66282152 None:intergenic 40.0%
CCTCCAACAGAAGGTAATAA+TGG - chr6.3:66282130-66282149 MS.gene042846:intron 40.0%
CGAGTCTCAAGTGAATGAAA+TGG - chr6.3:66281214-66281233 MS.gene042846:intron 40.0%
CTTACCATACCTAAGCCAAA+TGG + chr6.3:66280747-66280766 None:intergenic 40.0%
CTTGGAGAAGAATGACTTCT+TGG + chr6.3:66281048-66281067 None:intergenic 40.0%
GAGCAACAAAGGAAACTACA+TGG - chr6.3:66280926-66280945 MS.gene042846:intron 40.0%
GATGAAACACTTAGACTTGG+TGG - chr6.3:66282924-66282943 MS.gene042846:intron 40.0%
GCAAGTTATGACATGTCCAT+AGG + chr6.3:66282484-66282503 None:intergenic 40.0%
GTGCTTGAAATTGCAAGAGT+CGG - chr6.3:66281593-66281612 MS.gene042846:intron 40.0%
TCATTGTGTCTTCCACTAAC+AGG - chr6.3:66282896-66282915 MS.gene042846:intron 40.0%
TTCATACCACACTGCTATGA+AGG - chr6.3:66281298-66281317 MS.gene042846:intron 40.0%
TTGGGAATGTCGATAATTCG+AGG - chr6.3:66280428-66280447 MS.gene042846:intron 40.0%
TTTCAATCCTTGGAGATGGA+TGG - chr6.3:66283749-66283768 MS.gene042846:intron 40.0%
! AGTCCATTTTATGCACCCTT+TGG - chr6.3:66283899-66283918 MS.gene042846:intron 40.0%
! GGAACCACAAAACATCCTTT+TGG + chr6.3:66283678-66283697 None:intergenic 40.0%
! GTGCCGCTATAATCTCTATT+TGG + chr6.3:66280637-66280656 None:intergenic 40.0%
! TCTTCCATTTGGCTTAGGTA+TGG - chr6.3:66280740-66280759 MS.gene042846:CDS 40.0%
! TGTGGCTTAACCTCATTTTC+AGG + chr6.3:66283777-66283796 None:intergenic 40.0%
!!! CTAAGAGGATATTTTGACGG+AGG - chr6.3:66281801-66281820 MS.gene042846:CDS 40.0%
AAATCTAGCACCTCCTCCAA+AGG + chr6.3:66283918-66283937 None:intergenic 45.0%
AAGTCTGCAACAGCATCATC+TGG + chr6.3:66282190-66282209 None:intergenic 45.0%
AATCAGATTCGTCTCTCCAC+TGG - chr6.3:66283318-66283337 MS.gene042846:intron 45.0%
AATCTAGCACCTCCTCCAAA+GGG + chr6.3:66283917-66283936 None:intergenic 45.0%
ATCGTACCTTCATAGCAGTG+TGG + chr6.3:66281307-66281326 None:intergenic 45.0%
CAAAATGGTCCTCCAACAGA+AGG - chr6.3:66282121-66282140 MS.gene042846:intron 45.0%
CAGTAGAGACCAGTTTGTGA+AGG - chr6.3:66282871-66282890 MS.gene042846:intron 45.0%
CAGTTCAAGGAGAGCAACAA+AGG - chr6.3:66280915-66280934 MS.gene042846:intron 45.0%
CCTATTTGGAAAATGGGCAG+TGG - chr6.3:66280781-66280800 MS.gene042846:CDS 45.0%
GTCCCTCCCTCTATAAACAA+TGG + chr6.3:66280541-66280560 None:intergenic 45.0%
TAACCGAGCTGAGGGAAAAA+AGG + chr6.3:66284349-66284368 None:intergenic 45.0%
TACTCAATGCCCTAATGCCA+TGG - chr6.3:66282279-66282298 MS.gene042846:CDS 45.0%
TAGGTCTGCTATGGTCAAGA+GGG + chr6.3:66284028-66284047 None:intergenic 45.0%
TGTGCTTCTTAGGTCTGCTA+TGG + chr6.3:66284037-66284056 None:intergenic 45.0%
TTAGGTCTGCTATGGTCAAG+AGG + chr6.3:66284029-66284048 None:intergenic 45.0%
TTCTCTTGGACAGGATGAAC+AGG - chr6.3:66282649-66282668 MS.gene042846:intron 45.0%
! AGACCTAAGAAGCACAGACA+CGG - chr6.3:66284041-66284060 MS.gene042846:intron 45.0%
! AGGCGCAAATTTTTCTCGTC+TGG - chr6.3:66281535-66281554 MS.gene042846:CDS 45.0%
! CCACTGCCCATTTTCCAAAT+AGG + chr6.3:66280784-66280803 None:intergenic 45.0%
! CCATTTTATGCACCCTTTGG+AGG - chr6.3:66283902-66283921 MS.gene042846:intron 45.0%
! CCTCCAAAGGGTGCATAAAA+TGG + chr6.3:66283905-66283924 None:intergenic 45.0%
! TTGGAGGACCATTTTGTCTC+TGG + chr6.3:66282117-66282136 None:intergenic 45.0%
!! GACTTGGTGGCATTGCAATT+TGG - chr6.3:66282937-66282956 MS.gene042846:intron 45.0%
!! GTGTAGGGACTAAGTTGATG+CGG + chr6.3:66283258-66283277 None:intergenic 45.0%
!! TGGCATTAGGGCATTGAGTA+AGG + chr6.3:66282279-66282298 None:intergenic 45.0%
!! TTTTATGCACCCTTTGGAGG+AGG - chr6.3:66283905-66283924 MS.gene042846:intron 45.0%
!!! TGTCCTTTTTTCCCTCAGCT+CGG - chr6.3:66284343-66284362 MS.gene042846:CDS 45.0%
ACATACCAGAAGCTGCTCCA+TGG + chr6.3:66282299-66282318 None:intergenic 50.0%
AGAAGCTGCTCCATGGCATT+AGG + chr6.3:66282292-66282311 None:intergenic 50.0%
AGTTCGTGCGAATACACCAG+TGG + chr6.3:66283337-66283356 None:intergenic 50.0%
CAGTGTGGTATGAAGAGCCA+GGG + chr6.3:66281292-66281311 None:intergenic 50.0%
CCATTCACTAACCGAGCTGA+GGG + chr6.3:66284357-66284376 None:intergenic 50.0%
GAAGAGCCAGGGATGTTGAT+GGG + chr6.3:66281281-66281300 None:intergenic 50.0%
GAAGCTGCTCCATGGCATTA+GGG + chr6.3:66282291-66282310 None:intergenic 50.0%
TAATGCCATGGAGCAGCTTC+TGG - chr6.3:66282291-66282310 MS.gene042846:CDS 50.0%
TCAGGTTCCATCCATCTCCA+AGG + chr6.3:66283759-66283778 None:intergenic 50.0%
TCTGCTATGGTCAAGAGGGA+GGG + chr6.3:66284024-66284043 None:intergenic 50.0%
TGAAGAGCCAGGGATGTTGA+TGG + chr6.3:66281282-66281301 None:intergenic 50.0%
TGTCCGTGTCTGTGCTTCTT+AGG + chr6.3:66284047-66284066 None:intergenic 50.0%
!! AGGAGAGGTTGGCCTTTGAT+AGG - chr6.3:66280201-66280220 MS.gene042846:intron 50.0%
!!! GGAGGTGCTAGATTTTGTCC+TGG - chr6.3:66283923-66283942 MS.gene042846:intron 50.0%
AAAGGCCAACCTCTCCTTCC+TGG + chr6.3:66280198-66280217 None:intergenic 55.0%
AGATTGCCACCAGGAAGGAG+AGG - chr6.3:66280186-66280205 MS.gene042846:intron 55.0%
AGCATAGGCAGATTGCCACC+AGG - chr6.3:66280177-66280196 MS.gene042846:intron 55.0%
CCCTCAGCTCGGTTAGTGAA+TGG - chr6.3:66284354-66284373 MS.gene042846:CDS 55.0%
GCAGTGTGGTATGAAGAGCC+AGG + chr6.3:66281293-66281312 None:intergenic 55.0%
GCCATTCACTAACCGAGCTG+AGG + chr6.3:66284358-66284377 None:intergenic 55.0%
GTCTGCTATGGTCAAGAGGG+AGG + chr6.3:66284025-66284044 None:intergenic 55.0%
TAGGCAGATTGCCACCAGGA+AGG - chr6.3:66280181-66280200 MS.gene042846:intron 55.0%
TCCGTTCCCATCAACATCCC+TGG - chr6.3:66281272-66281291 MS.gene042846:intron 55.0%
! GCCAGGGATGTTGATGGGAA+CGG + chr6.3:66281276-66281295 None:intergenic 55.0%
AGGCGAGCTAGTTCAGCTCC+AGG + chr6.3:66283944-66283963 None:intergenic 60.0%
GTCAAGAGGGAGGGAGAGAG+AGG + chr6.3:66284015-66284034 None:intergenic 60.0%
TGCCACCAGGAAGGAGAGGT+TGG - chr6.3:66280190-66280209 MS.gene042846:intron 60.0%
GGCCAACCTCTCCTTCCTGG+TGG + chr6.3:66280195-66280214 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 66280072 66284425 66280072 ID=MS.gene042846
chr6.3 mRNA 66280072 66284425 66280072 ID=MS.gene042846.t1;Parent=MS.gene042846
chr6.3 exon 66284202 66284425 66284202 ID=MS.gene042846.t1.exon1;Parent=MS.gene042846.t1
chr6.3 CDS 66284202 66284425 66284202 ID=cds.MS.gene042846.t1;Parent=MS.gene042846.t1
chr6.3 exon 66283416 66283740 66283416 ID=MS.gene042846.t1.exon2;Parent=MS.gene042846.t1
chr6.3 CDS 66283416 66283740 66283416 ID=cds.MS.gene042846.t1;Parent=MS.gene042846.t1
chr6.3 exon 66283178 66283327 66283178 ID=MS.gene042846.t1.exon3;Parent=MS.gene042846.t1
chr6.3 CDS 66283178 66283327 66283178 ID=cds.MS.gene042846.t1;Parent=MS.gene042846.t1
chr6.3 exon 66282185 66282427 66282185 ID=MS.gene042846.t1.exon4;Parent=MS.gene042846.t1
chr6.3 CDS 66282185 66282427 66282185 ID=cds.MS.gene042846.t1;Parent=MS.gene042846.t1
chr6.3 exon 66281752 66281835 66281752 ID=MS.gene042846.t1.exon5;Parent=MS.gene042846.t1
chr6.3 CDS 66281752 66281835 66281752 ID=cds.MS.gene042846.t1;Parent=MS.gene042846.t1
chr6.3 exon 66281501 66281579 66281501 ID=MS.gene042846.t1.exon6;Parent=MS.gene042846.t1
chr6.3 CDS 66281501 66281579 66281501 ID=cds.MS.gene042846.t1;Parent=MS.gene042846.t1
chr6.3 exon 66280712 66280833 66280712 ID=MS.gene042846.t1.exon7;Parent=MS.gene042846.t1
chr6.3 CDS 66280712 66280833 66280712 ID=cds.MS.gene042846.t1;Parent=MS.gene042846.t1
chr6.3 exon 66280492 66280619 66280492 ID=MS.gene042846.t1.exon8;Parent=MS.gene042846.t1
chr6.3 CDS 66280492 66280619 66280492 ID=cds.MS.gene042846.t1;Parent=MS.gene042846.t1
chr6.3 exon 66280072 66280180 66280072 ID=MS.gene042846.t1.exon9;Parent=MS.gene042846.t1
chr6.3 CDS 66280072 66280180 66280072 ID=cds.MS.gene042846.t1;Parent=MS.gene042846.t1
Gene Sequence

>MS.gene042846

ATGAGAGAAAATATTTCAGAAACATGGTTAGTGATGATCATTGTGATACTGTTCACTGCAATATTTGCAAAAGTAATTCAAATCAAGAAAAGGAAGGAAGATAAAAGCATAGGCAGATTGCCACCAGGAAGGAGAGGTTGGCCTTTGATAGGTGACAGTATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAATTTGTTGAAGAAATGGTGCAAAGGTATTTACTAGTAATATAAAATTTGAGTAAATATACAAGTTGGTTCTGAAATTGTAGAGTTGTATCAATTTAGTCCTCACACATTATCAATATTTCAAACTGAATTGAAATTTTGCAATTTTAAAGATAATTTTGGGAATGTCGATAATTCGAGGAACTGAATTGATACAGTTCTATACTTTCAAGGACTAATTTGATAATGCAAGGAATTTGTTAGAAATGCCTTGTAAAAATCATTCTAACCATTGTTTATAGAGGGAGGGACTATAGTACTATATCATAGCAGCATTTGAACAGATCTCTATTGTTCCGCGATATGCTATGAGTATAAAATATTGCCAAATAGAGATTATAGCGGCACTATAGCGCTGTTGTGTCGAGAAATTTAAACAAACTTCTAGTTTTTTCTATCCACAATCACAACGCTGTTTTCTAACAGATAAATCTTCCATTTGGCTTAGGTATGGTAAGATATTTTCATGCAGCCTATTTGGAAAATGGGCAGTGGTGTCATCTGATCCGAGCTTCAATCGTTTTGTAATGCAAAATGAAGGAAAATTATTCATGTCAAGTTATCCAAAATCTTTTAGAGATTTGGTTGGTAAAAATGGCGTGATTACAGTTCAAGGAGAGCAACAAAGGAAACTACATGGAATCGCATCCAATATGATGCGATTAGATAAGCTTAAGTTCCATTTCATGAACGATATACAAAATGTCATGATCAAAACTTTGAGCAATTTTAAAAACCAAGAAGTCATTCTTCTCCAAGATGTTTGTAGAAAGGTAACGATCCATTTACTTTCTAACAACATTTTCATTTTCATTTTCATTTTCACTCATTTTGAATTAATTTGTGCATGATTCAATGCAGGTAGCTATAAATTTAATGGTTAATCAACTATTAGGCGTTTCAAGCGAGTCTCAAGTGAATGAAATGGCTCAGTTGTTTTCTGATTTTGTTGATGGTTGTCTATCCGTTCCCATCAACATCCCTGGCTCTTCATACCACACTGCTATGAAGGTACGATGAGTAAACTTTTAGACCAATGATATATAAAGAGAGTAGAATTGCAAAATGAAAACAAAAGAGTGTTAAGAAGTCGGTATTTTTTAGCTACATAACGAACTACATTTCAAAGAAATGAGTTTATTGTTCTCATGATCATATCCTTCAAGAACCATCTTATATGAAGTACTTGAAATTGTCCATTTCAAATAAAACTGCAAGCCATAATTAGGCGCAAATTTTTCTCGTCTGGCTTATTGATTGTTATGCAAGTAAATCAGCATTTTAGTGCTTGAAATTGCAAGAGTCGGTCAATTTAGTACCTCAAATTTATGAAATCGAAATTCATTCTATTAAATAGAACGATGTTAGTCAATCTATTCCTTTTTCTAAATTTAGTACCACAGTCTTAAGGTTCTATGCTTGTCAAGATGCAGCAAAATACTACTCATTCAAGTCAATATGTAACTCTTCCATTGATTTTGATTAATGTTTACTAAGAGGATATTTTGACGGAGGGACTAAATTGATTGACGTTATTTAATTTAAGGGACTAATTTGCTATTTTGTAAATTCGAGGGACTAAATTTCCCGACTGTTACGATTTCAAGTACTGAAATGCTGATTCGTTCATTGTTATGTTAATCGATTAATCTTATAAGGGTTTTTCTATCATGTGCGAATATGCACGTGTTAATTAAATTACTTAGGCAAAATATAATTCTAGATTAATCAGATATTGATGTGACATTCTTTGGATATTAGGCAAGAGAGAAAATCATAAGTAAAATAAACAAGATCATAGAGGTCCAGAGACAAAATGGTCCTCCAACAGAAGGTAATAATGGTGTACTTGGAAGACTAATAGAGGAAGATAGTTTGCCAGATGATGCTGTTGCAGACTTCATCATCAATCTTCTATTTGCTGGCAATGAAACTACCACAAAAACAATGCTTTTTGCAGTCTATTTCCTTACTCAATGCCCTAATGCCATGGAGCAGCTTCTGGTATGTATAATAGAATTAATCTTGAAATTGTTTTTCCTTATTCAGTTCATGCATGGATAAACAACTTAATTAAGTGTTTATAGTATAAGTGCTTATAAATAAGCTACTTCTATGACAAAAGATAAAATAAAGTCAAACTGTTTTCAAATAAGATGTAAGTTGAAATAACCTATGGACATGTCATAACTTGCTTGTATAATCTCTCCCAAGAAATTTCGCAAGTGCTTATGTCAGTAGATAAGCTTAAATAAGTCAATTCAAACAATTATTTTTAAAAATATATTAAAACATTAAAATTAAAATTAAAAACTTTTTTTAATTAATTTCTGCAAATAATTCTCTTGGACAGGATGAACAGGATTCTCTAAGGACTAATTTTGGAGAAGAATTTCTTACATGGCAGGACTATAAAGCAATGCCATTTACTCAGTGTGTAAGTGATTAACATTTTTGGCTATTTTTCATAACAGATTGTCTTCAACTCAATTTTGATGAGGTAGTTCATCTCATAAATATTTTTCTATTGAAAGATAATAATTAATTTATAGTTGGCATATTCAGTAGAGACCAGTTTGTGAAGGTTTCATTGTGTCTTCCACTAACAGGTTATTGATGAAACACTTAGACTTGGTGGCATTGCAATTTGGTTACTTAGAGAAGCAAAAGAAGACATTCAATACCAAGGTACACAATTTTGAGAGTGGTTGGTATGCAAGTTCATTGTATAAGAACTTATATCAGTATCCACTAATATGTTCATTATTGACACATCATTATCTATACTTATTTTAATTCTCTCAATGATTAAAATAACTTAAATAAATAATGTTTTGTTTTGTCAACCTATTAATATATGTAAGTATAAACTCTCTTACATTGAAAATGATATCATTTAATATTAGTACATGAATGAATATCCAATTTGGTCATGAAAATGTTGGACCGCATCAACTTAGTCCCTACACCAACAACATTTCAAAATGATCAGTGAAATTGAAAAATGTTAATCAGATTCGTCTCTCCACTGGTGTATTCGCACGAACTATAATGACATTATGTTGGTAATTTTATAGATACATTTGAAAGTTGAAACTAAGAGAATAATGTCGGGGATGTCATGAATGTATTTGATAACATATTTAGGGTCTAGACAGAGAGTCCGACCTGATTAATATTATACAATTTTAAAGATTATTTTGAAATATTAATAATGTGGAGGACTAAATTGATACTTGATATGGTCCTACAATTTAGGACCAAATTATATATTGACTCATTAGTGCAGCTATGATATGCATGTAAAAGCTTAATACTATAAATTACTGACAAAAACTCATCTATTTTTGAGCAGATTTTGTTATTCCAAAAGGATGTTTTGTGGTTCCATTTATCTCAGCAGTTCATTTAGATGAGAAGGTGTACAATGAAGCTAAAAATTTCAATCCTTGGAGATGGATGGAACCTGAAAATGAGGTTAAGCCACATAACATTTTAGTGAATAATGCATATAATTTTGTACTTTTAGTTCAATTGTTTTCTTAATTGTTATGGTCTCAATTATGAAGGAAAAGAGAAATTGGAGAAGTAGTCCATTTTATGCACCCTTTGGAGGAGGTGCTAGATTTTGTCCTGGAGCTGAACTAGCTCGCCTTCAAATTGCTCTTTTTCTTCATTACTTTGTTACAAATTATAGGTAATGCCTCTCTCTCCCTCCCTCTTGACCATAGCAGACCTAAGAAGCACAGACACGGACACCAGACACGACACGAATACTGATACGCCGACATCGTTAATAATTTGAGAACGGTGGTTAATGGATTGTGACACCTTGTTATATTCATTAGTCATCCACCAAACATAATTAACTACATATTAGATCGGCGTTAACCATCCAAATTATTGTCGATTTTGTTGTAAAATTTGTGTTCCACTTGTATGACTTGTAGTTGAAGCATAATCTATCAAATTTGATCCTACCTAACATGTTTGAATGATTTACAACAGATGGAAACAAATGAAGGAAGATAGGATGTCCTTTTTTCCCTCAGCTCGGTTAGTGAATGGCTTTGAAATTTGTCTAACAAAAAGACATGATAATAATCAAAGAAACTGA
Protein sequence

>MS.gene042846.t1

MRENISETWLVMIIVILFTAIFAKVIQIKKRKEDKSIGRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVQRYGKIFSCSLFGKWAVVSSDPSFNRFVMQNEGKLFMSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLDKLKFHFMNDIQNVMIKTLSNFKNQEVILLQDVCRKVAINLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSVPINIPGSSYHTAMKAREKIISKINKIIEVQRQNGPPTEGNNGVLGRLIEEDSLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPNAMEQLLDEQDSLRTNFGEEFLTWQDYKAMPFTQCVIDETLRLGGIAIWLLREAKEDIQYQDFVIPKGCFVVPFISAVHLDEKVYNEAKNFNPWRWMEPENEEKRNWRSSPFYAPFGGGARFCPGAELARLQIALFLHYFVTNYRWKQMKEDRMSFFPSARLVNGFEICLTKRHDNNQRN