AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene04595

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04595.t1 MTR_7g092770 99.613 775 3 0 1 775 1 775 0.0 1606
MS.gene04595.t1 MTR_0305s0020 93.428 776 48 3 1 775 1 774 0.0 1498
MS.gene04595.t1 MTR_4g066150 81.982 777 131 7 1 775 1 770 0.0 1315
MS.gene04595.t1 MTR_3g027150 68.734 790 225 7 7 775 34 822 0.0 1165
MS.gene04595.t1 MTR_4g023460 69.289 788 220 8 7 775 358 1142 0.0 1155
MS.gene04595.t1 MTR_5g010390 69.063 779 228 6 6 775 233 1007 0.0 1151
MS.gene04595.t1 MTR_0291s0010 67.215 790 241 6 3 775 9 797 0.0 1145
MS.gene04595.t1 MTR_4g033215 65.290 775 256 8 8 775 276 1044 0.0 1063
MS.gene04595.t1 MTR_8g031270 60.307 781 291 8 6 775 231 1003 0.0 997
MS.gene04595.t1 MTR_7g076900 59.696 789 287 10 8 775 235 1013 0.0 972
MS.gene04595.t1 MTR_4g057675 58.270 786 304 10 2 775 10 783 0.0 890
MS.gene04595.t1 MTR_4g071870 56.234 786 286 12 2 775 10 749 0.0 856
MS.gene04595.t1 MTR_4g107850 52.964 776 319 14 19 775 290 1038 0.0 808
MS.gene04595.t1 MTR_6g027540 51.175 766 325 13 30 775 273 1009 0.0 775
MS.gene04595.t1 MTR_6g028050 48.105 765 357 13 29 775 284 1026 0.0 738
MS.gene04595.t1 MTR_1g015540 48.528 781 369 13 12 775 9 773 0.0 696
MS.gene04595.t1 MTR_5g096980 42.125 781 415 13 8 775 7 763 0.0 603
MS.gene04595.t1 MTR_4g023250 66.923 130 41 1 645 774 1 128 3.76e-54 183
MS.gene04595.t1 MTR_4g023230 49.180 122 47 1 562 683 49 155 6.30e-32 122
MS.gene04595.t1 MTR_4g023390 50.000 104 30 1 648 751 16 97 2.32e-25 101
MS.gene04595.t1 MTR_7g052280 67.089 79 2 2 247 325 1 55 9.12e-25 98.2
MS.gene04595.t1 MTR_4g023240 66.667 60 20 0 496 555 10 69 9.51e-21 87.0
MS.gene04595.t1 MTR_2g027360 31.783 129 75 4 40 161 3 125 5.12e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene04595.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene04595.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene04595.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene04595.t1 AT3G57880 90.206 776 72 3 1 775 1 773 0.0 1473
MS.gene04595.t1 AT1G51570 88.288 777 88 3 1 775 1 776 0.0 1437
MS.gene04595.t1 AT5G12970 81.105 778 135 7 1 775 1 769 0.0 1305
MS.gene04595.t1 AT5G06850 67.090 787 238 7 7 775 11 794 0.0 1150
MS.gene04595.t1 AT4G11610 68.205 780 232 7 6 775 238 1011 0.0 1140
MS.gene04595.t1 AT4G11610 68.205 780 232 7 6 775 234 1007 0.0 1140
MS.gene04595.t1 AT4G11610 68.205 780 232 7 6 775 101 874 0.0 1138
MS.gene04595.t1 AT5G48060 66.624 779 249 7 7 775 259 1036 0.0 1118
MS.gene04595.t1 AT1G22610 65.613 791 250 9 1 775 245 1029 0.0 1080
MS.gene04595.t1 AT4G00700 59.515 783 301 6 6 775 227 1006 0.0 978
MS.gene04595.t1 AT4G00700 59.515 783 301 6 6 775 227 1006 0.0 978
MS.gene04595.t1 AT3G61300 58.922 779 290 13 4 775 217 972 0.0 945
MS.gene04595.t1 AT4G20080 57.827 773 307 10 9 775 15 774 0.0 927
MS.gene04595.t1 AT1G04150 57.828 792 290 13 8 775 241 1012 0.0 925
MS.gene04595.t1 AT1G74720 52.441 799 341 13 2 775 297 1081 0.0 823
MS.gene04595.t1 AT3G03680 52.529 771 313 18 31 775 274 1017 0.0 780
MS.gene04595.t1 AT5G17980 49.141 757 354 12 29 775 314 1049 0.0 756
MS.gene04595.t1 AT3G61720 38.923 817 424 24 7 775 6 795 1.43e-168 506
MS.gene04595.t1 AT5G03435 40.874 778 402 24 7 769 6 740 1.49e-167 502
MS.gene04595.t1 AT5G03435 43.426 578 291 16 7 575 6 556 2.49e-141 427
MS.gene04595.t1 AT5G44760 51.372 401 146 11 8 400 5 364 9.11e-123 377
MS.gene04595.t1 AT5G44760 23.664 524 283 14 179 677 20 451 6.67e-20 94.4
MS.gene04595.t1 AT1G03370 27.459 244 160 8 40 280 3 232 5.83e-14 76.3
MS.gene04595.t1 AT1G03370 27.459 244 160 8 40 280 3 232 8.25e-14 76.3

Find 218 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTATGTGAAGGCAATTT+TGG 0.161096 7.3:+61735308 MS.gene04595:CDS
TGAAAAGCATGTTGTTATTA+TGG 0.199124 7.3:+61735560 MS.gene04595:CDS
CTTCTTGTTCTTCATCCAAC+TGG 0.238193 7.3:+61736065 MS.gene04595:CDS
CTGTGCCACTCAATTTCTTC+AGG 0.239203 7.3:+61736915 MS.gene04595:CDS
TCCAACTGGGGTGAAGAAAA+TGG 0.246387 7.3:+61736079 MS.gene04595:CDS
TCGAGCTGGCTTACGGTTAA+TGG 0.248168 7.3:-61736200 None:intergenic
AAATGCAGTATCTTTATGTT+AGG 0.287072 7.3:+61734749 MS.gene04595:CDS
CTCCTAAGCTTTGGTATTTG+AGG 0.293908 7.3:+61735229 MS.gene04595:CDS
CCTAGCAGTTCCTCTTTGTT+AGG 0.294279 7.3:-61735462 None:intergenic
ACAAACTGTTGTCGGGGATT+TGG 0.302220 7.3:+61736712 MS.gene04595:CDS
AGAAGGTGGTTATCATGTTT+TGG 0.311177 7.3:+61735641 MS.gene04595:CDS
TTGGAGTTTGGTACTATAGA+TGG 0.323138 7.3:+61736531 MS.gene04595:CDS
ATGCCGATGAAATCAAATAA+TGG 0.326327 7.3:+61735768 MS.gene04595:CDS
GGGAGCTGATGCTGGCTGTT+TGG 0.327899 7.3:+61735100 MS.gene04595:CDS
AACTCTTCATCTAGTTCGTC+AGG 0.348361 7.3:-61736611 None:intergenic
TGCGGCGCCAGAGGACTATC+AGG 0.355118 7.3:-61735036 None:intergenic
GTGGGGATATTGAATGCTTC+GGG 0.361234 7.3:+61735741 MS.gene04595:CDS
GCTTATTGTGTAGCAAAGTA+TGG 0.361422 7.3:+61735807 MS.gene04595:CDS
CTGATGCTCTTGCAAATATT+AGG 0.364946 7.3:+61735190 MS.gene04595:CDS
ATTGTTGGTAAGATAAGTTC+AGG 0.373990 7.3:-61736488 None:intergenic
TTTGAATCTCTTTGTCCTCC+AGG 0.374663 7.3:-61735975 None:intergenic
CAAGTTGTGGCTCTTCTCAC+TGG 0.375373 7.3:+61736848 MS.gene04595:CDS
TCTTTCAACAGAAAATCTTC+TGG 0.377082 7.3:-61734658 None:intergenic
TGAATCAGAACTGTGGTGAT+AGG 0.377154 7.3:-61736437 None:intergenic
GGACTTGCAGCCGTCTGATA+AGG 0.381042 7.3:+61735272 MS.gene04595:CDS
TCCTAAGCTTTGGTATTTGA+GGG 0.385923 7.3:+61735230 MS.gene04595:CDS
TTCTTGTTCTTCATCCAACT+GGG 0.388106 7.3:+61736066 MS.gene04595:CDS
GACTGCAGTCTTTGCTGAGC+TGG 0.390838 7.3:+61736750 MS.gene04595:CDS
GAAGGATCGGATTCAGGCTT+CGG 0.396181 7.3:+61734918 MS.gene04595:CDS
GCTGATGCTGGCTGTTTGGA+TGG 0.398155 7.3:+61735104 MS.gene04595:CDS
CACCTTGGTGGTAAGGTCTC+TGG 0.400603 7.3:+61734691 MS.gene04595:CDS
TCGGATGCGGCGACGGTTAG+TGG 0.413525 7.3:+61735165 MS.gene04595:CDS
GAGAAATTCAACTGGCTGTA+AGG 0.416142 7.3:+61736102 MS.gene04595:CDS
AGTGGGGATATTGAATGCTT+CGG 0.416156 7.3:+61735740 MS.gene04595:CDS
GACTAATCCTGAATGGAATC+AGG 0.424124 7.3:+61734882 MS.gene04595:CDS
CATATGAGGGTCTGTCTAGA+AGG 0.427742 7.3:+61735624 MS.gene04595:CDS
TGCCGATGAAATCAAATAAT+GGG 0.427885 7.3:+61735769 MS.gene04595:CDS
CTACCTGCGAAAGATGTTAC+TGG 0.428150 7.3:+61734790 MS.gene04595:CDS
GTCTGATAAGGGAAGATTCC+CGG 0.431157 7.3:+61735284 MS.gene04595:CDS
AGAAGAGCCACAACTTGAAA+TGG 0.431378 7.3:-61736842 None:intergenic
GAATGAGGATTTGATGTTTG+TGG 0.433783 7.3:+61735386 MS.gene04595:CDS
AGGAAGAGTGATAAGGTGAG+AGG 0.436722 7.3:+61735078 MS.gene04595:CDS
TGTTATTCCCTTACAGATGA+TGG 0.437429 7.3:+61735491 MS.gene04595:CDS
CTTACCACCAAGGTGGGGTT+TGG 0.439462 7.3:-61734683 None:intergenic
AATGCAGTATCTTTATGTTA+GGG 0.439908 7.3:+61734750 MS.gene04595:CDS
CATTTGCTCAACAAGGTCAT+AGG 0.445253 7.3:-61734731 None:intergenic
CTATCAGGAGGAACCCTCTT+CGG 0.447291 7.3:-61735021 None:intergenic
GGTTTGACCAAATCTGCAAT+TGG 0.447777 7.3:+61736408 MS.gene04595:CDS
CCAAGCTTGACTTCAACATA+AGG 0.450353 7.3:-61734823 None:intergenic
CTCCCATTATTTGATTTCAT+CGG 0.451057 7.3:-61735771 None:intergenic
CAGACTGTCGAGCTGGCTTA+CGG 0.455302 7.3:-61736207 None:intergenic
TGTGACTCCATTTCAAGTTG+TGG 0.455642 7.3:+61736835 MS.gene04595:CDS
GACTTGCAGCCGTCTGATAA+GGG 0.457452 7.3:+61735273 MS.gene04595:CDS
TTGCAAGCAGAATTCATATG+AGG 0.457775 7.3:+61735610 MS.gene04595:CDS
CCGTGCACTGTCATTACAAT+TGG 0.462904 7.3:+61735912 MS.gene04595:CDS
TGTATCTATCTCCTAAGCTT+TGG 0.469644 7.3:+61735220 MS.gene04595:CDS
CCAACTGGGGTGAAGAAAAT+GGG 0.470245 7.3:+61736080 MS.gene04595:CDS
GTAGGATACAAACTGTTGTC+GGG 0.474674 7.3:+61736705 MS.gene04595:CDS
TCTCCGGTCCATCATCTGTA+AGG 0.477605 7.3:-61735499 None:intergenic
GGAGGATAGGAAGAGTGATA+AGG 0.478220 7.3:+61735071 MS.gene04595:CDS
CAGGTTTGTGATCGAGTCTC+CGG 0.480206 7.3:-61735515 None:intergenic
AAGCATGTTGTTATTATGGA+AGG 0.483057 7.3:+61735564 MS.gene04595:CDS
TGCCACTCAATTTCTTCAGG+AGG 0.483882 7.3:+61736918 MS.gene04595:CDS
GGATGAATGTAATGCATCTT+GGG 0.484486 7.3:-61736179 None:intergenic
AAAATCAGTGGCTCCTCAAA+CGG 0.484536 7.3:-61735417 None:intergenic
AAGAGGTAAAGGAAAATTGT+TGG 0.485200 7.3:-61736503 None:intergenic
GAAAATGGGAGAAATTCAAC+TGG 0.487642 7.3:+61736094 MS.gene04595:CDS
GGAAGAGTGATAAGGTGAGA+GGG 0.488372 7.3:+61735079 MS.gene04595:CDS
GGTGAGAGGGGAGCTGATGC+TGG 0.489453 7.3:+61735092 MS.gene04595:CDS
TGCTGAGCCACCGTTGAGAA+AGG 0.490101 7.3:+61736271 MS.gene04595:CDS
CAAACCCCACCTTGGTGGTA+AGG 0.491282 7.3:+61734684 MS.gene04595:CDS
GCATCCGAGTGCCACGCCTC+AGG 0.494760 7.3:-61735150 None:intergenic
TGGATGAATGTAATGCATCT+TGG 0.496196 7.3:-61736180 None:intergenic
GTCGGGGATTTGGCGACTCA+AGG 0.497341 7.3:+61736722 MS.gene04595:CDS
ATCTTTCGCAGGTAGCTCCT+TGG 0.498641 7.3:-61734782 None:intergenic
TCCACAGCTGTTTCGCAGTA+GGG 0.498706 7.3:-61735695 None:intergenic
TCCATGTGAGGTGGGTGCCT+AGG 0.499408 7.3:-61736557 None:intergenic
TAGCAAAGTATGGACAGAAA+TGG 0.499639 7.3:+61735817 MS.gene04595:CDS
GGCGCCGCAGTGGTATAGAT+TGG 0.501455 7.3:+61735050 MS.gene04595:CDS
AACAGAAAATCTTCTGGTGG+AGG 0.503215 7.3:-61734652 None:intergenic
AGAAGAAGACTAATCCTGAA+TGG 0.504293 7.3:+61734875 MS.gene04595:CDS
TGTGGCTGCGGAACCGTTTG+AGG 0.506146 7.3:+61735404 MS.gene04595:CDS
AAGAAATTGAGTGGCACAGA+AGG 0.506210 7.3:-61736911 None:intergenic
AGCAAAGTATGGACAGAAAT+GGG 0.506383 7.3:+61735818 MS.gene04595:CDS
TGAGGCGTGGCACTCGGATG+CGG 0.507184 7.3:+61735152 MS.gene04595:CDS
GAAGAGTGATAAGGTGAGAG+GGG 0.511445 7.3:+61735080 MS.gene04595:CDS
CAAGCTTGACTTCAACATAA+GGG 0.511908 7.3:-61734822 None:intergenic
ATTGCCTTCACATAAACCTC+CGG 0.511961 7.3:-61735303 None:intergenic
CTCAGCACGGCTAAGTCTCA+TGG 0.512975 7.3:-61736255 None:intergenic
CAGCTGTGGAAGTCAAGTAT+TGG 0.513039 7.3:+61735708 MS.gene04595:CDS
GTTTCCTGAGGCGTGGCACT+CGG 0.515073 7.3:+61735146 MS.gene04595:CDS
GCATGTTGTTATTATGGAAG+GGG 0.516659 7.3:+61735566 MS.gene04595:CDS
ACCCTCAAATACCAAAGCTT+AGG 0.516986 7.3:-61735231 None:intergenic
GGTTCCTCCTGATAGTCCTC+TGG 0.518825 7.3:+61735029 MS.gene04595:CDS
TAATGCATCTTGGGCAGCAA+TGG 0.519377 7.3:-61736170 None:intergenic
GGTGGAATGAGCAGTATACT+TGG 0.519885 7.3:+61735877 MS.gene04595:CDS
CGGTGCAAAGCTATCGATGA+TGG 0.520044 7.3:-61735853 None:intergenic
GAATCAGAACTGTGGTGATA+GGG 0.522130 7.3:-61736436 None:intergenic
CTGATGCTGGCTGTTTGGAT+GGG 0.522554 7.3:+61735105 MS.gene04595:CDS
GGATTTGATGTTTGTGGCTG+CGG 0.523650 7.3:+61735392 MS.gene04595:CDS
AGAACTGATTGCATGCTTTG+AGG 0.524185 7.3:+61736950 MS.gene04595:CDS
ATGAAATCAAATAATGGGAG+GGG 0.526239 7.3:+61735774 MS.gene04595:CDS
CCTTATGTTGAAGTCAAGCT+TGG 0.526765 7.3:+61734823 MS.gene04595:CDS
TTGAGTGGATTAATTGCTGT+TGG 0.528890 7.3:+61736380 MS.gene04595:CDS
AGTATTGGAGTTCTTGAAGT+GGG 0.528941 7.3:+61735723 MS.gene04595:CDS
GCCTAGGCACCCACCTCACA+TGG 0.528950 7.3:+61736556 MS.gene04595:CDS
TTCCACAGCTGTTTCGCAGT+AGG 0.529246 7.3:-61735696 None:intergenic
TTCAACAGAAAATCTTCTGG+TGG 0.529955 7.3:-61734655 None:intergenic
GGAGGTCGTGGAATATATGC+TGG 0.530323 7.3:+61736292 MS.gene04595:CDS
GGAAGCTTGTGACGAAACCT+TGG 0.530590 7.3:-61736890 None:intergenic
GATTCAGGCTTCGGTTCTTG+AGG 0.530948 7.3:+61734927 MS.gene04595:CDS
GGTTAATGTGATCGAGGCAC+AGG 0.532299 7.3:+61735251 MS.gene04595:CDS
TTCCCTTACAGATGATGGAC+CGG 0.532408 7.3:+61735496 MS.gene04595:CDS
AGCATGCAATCAGTTCTTGC+AGG 0.532832 7.3:-61736944 None:intergenic
TCTTTATGTTAGGGTTGTGA+AGG 0.534597 7.3:+61734759 MS.gene04595:CDS
ATCTAGTTCGTCAGGGTGTG+CGG 0.535646 7.3:-61736603 None:intergenic
CACCATGGTGGTGATAAGCC+TGG 0.536704 7.3:+61735957 MS.gene04595:CDS
GGACTAGAATCTCTCAGAGT+AGG 0.538732 7.3:+61735346 MS.gene04595:CDS
TTCTTCTCATACTCCACATG+TGG 0.540825 7.3:-61736325 None:intergenic
GGTAGGATACAAACTGTTGT+CGG 0.541500 7.3:+61736704 MS.gene04595:CDS
AGCATGTTGTTATTATGGAA+GGG 0.541928 7.3:+61735565 MS.gene04595:CDS
ACCGTTGAGAAAGGAGGTCG+TGG 0.543577 7.3:+61736280 MS.gene04595:CDS
GATGCCTCAGACTGTCGAGC+TGG 0.548419 7.3:-61736214 None:intergenic
GGTACTATAGATGGAGGCCT+AGG 0.549215 7.3:+61736540 MS.gene04595:CDS
TTGAACCACCTAGTGTTCAC+AGG 0.551877 7.3:-61735534 None:intergenic
TCTCAATGAGATTCCGAAGA+GGG 0.552069 7.3:+61735008 MS.gene04595:CDS
AGTGGTATAGATTGGAGGAT+AGG 0.552452 7.3:+61735058 MS.gene04595:CDS
CGCATCCTCACGATGTCAGA+AGG 0.560574 7.3:-61736656 None:intergenic
ATGAAGAACAAGAAGCGGAT+AGG 0.561332 7.3:-61736057 None:intergenic
AGACGTGTGTCCATGTGAGG+TGG 0.561408 7.3:-61736566 None:intergenic
CTGAGAGATTCTAGTCCTCA+AGG 0.562862 7.3:-61735340 None:intergenic
GAGACCAAACCCCACCTTGG+TGG 0.564488 7.3:+61734679 MS.gene04595:CDS
GTGGCACTCGGATGCGGCGA+CGG 0.568143 7.3:+61735158 MS.gene04595:CDS
GATTAATTGCTGTTGGAAAG+TGG 0.569868 7.3:+61736387 MS.gene04595:CDS
TTGCCTTCACATAAACCTCC+GGG 0.571620 7.3:-61735302 None:intergenic
CAGTCTCGAGTGTGGAAAGA+CGG 0.571907 7.3:-61736016 None:intergenic
CAGGGTGTGCGGAATCAGCA+TGG 0.574507 7.3:-61736592 None:intergenic
GACAACAGTTTGTATCCTAC+CGG 0.574843 7.3:-61736702 None:intergenic
TGTTAGGGTTGTGAAGGCCA+AGG 0.575221 7.3:+61734765 MS.gene04595:CDS
ATGTCAGAAGGTCTTGTGGT+TGG 0.576119 7.3:-61736644 None:intergenic
ATAGTCCTCTGGCGCCGCAG+TGG 0.576174 7.3:+61735040 MS.gene04595:CDS
CTATACCACTGCGGCGCCAG+AGG 0.580494 7.3:-61735045 None:intergenic
ATCACAAACCTGTGAACACT+AGG 0.581313 7.3:+61735526 MS.gene04595:CDS
CCTAACAAAGAGGAACTGCT+AGG 0.581474 7.3:+61735462 MS.gene04595:CDS
AGAGACCTTACCACCAAGGT+GGG 0.585249 7.3:-61734689 None:intergenic
TCCACGACCTCCTTTCTCAA+CGG 0.585923 7.3:-61736281 None:intergenic
TATCAATCCGATGTGGAATG+AGG 0.587518 7.3:+61735371 MS.gene04595:CDS
CACGATGTCAGAAGGTCTTG+TGG 0.588138 7.3:-61736648 None:intergenic
TTGTTGGTAAGATAAGTTCA+GGG 0.591225 7.3:-61736487 None:intergenic
GCCGCAGTGGTATAGATTGG+AGG 0.592270 7.3:+61735053 MS.gene04595:CDS
GCCCTACTGCGAAACAGCTG+TGG 0.599265 7.3:+61735694 MS.gene04595:CDS
GGGAATCTTCCCTTATCAGA+CGG 0.601816 7.3:-61735282 None:intergenic
GTCAAGCTTGGTAATTACAA+AGG 0.602299 7.3:+61734835 MS.gene04595:CDS
TGAAATCAAATAATGGGAGG+GGG 0.602820 7.3:+61735775 MS.gene04595:CDS
ATTCCCGGAGGTTTATGTGA+AGG 0.604425 7.3:+61735299 MS.gene04595:CDS
ACGACCTCCTTTCTCAACGG+TGG 0.605485 7.3:-61736278 None:intergenic
TGCAAGCAGAATTCATATGA+GGG 0.607458 7.3:+61735611 MS.gene04595:CDS
CTTCCAGTAACATCTTTCGC+AGG 0.611302 7.3:-61734793 None:intergenic
AGCTGATGAAGCGTTTCCTG+AGG 0.615613 7.3:+61735134 MS.gene04595:CDS
AGGGTGTGCGGAATCAGCAT+GGG 0.615690 7.3:-61736591 None:intergenic
CCAATTGTAATGACAGTGCA+CGG 0.615694 7.3:-61735912 None:intergenic
ATGAAGCGTTTCCTGAGGCG+TGG 0.618045 7.3:+61735139 MS.gene04595:CDS
GTGGAATATATGCTGGATGT+TGG 0.618722 7.3:+61736299 MS.gene04595:CDS
GACTCGATCAGTCTCGAGTG+TGG 0.619232 7.3:-61736024 None:intergenic
CTCCGGTCCATCATCTGTAA+GGG 0.619971 7.3:-61735498 None:intergenic
GAGTTTGGTACTATAGATGG+AGG 0.620027 7.3:+61736534 MS.gene04595:CDS
TTCTCAACGGTGGCTCAGCA+CGG 0.620730 7.3:-61736268 None:intergenic
TAAGCCAGCTCGACAGTCTG+AGG 0.621749 7.3:+61736210 MS.gene04595:CDS
TCTTGTTCTTCATCCAACTG+GGG 0.622521 7.3:+61736067 MS.gene04595:CDS
TCGATAGCTTTGCACCGAGG+TGG 0.623002 7.3:+61735859 MS.gene04595:CDS
GACGTGTGTCCATGTGAGGT+GGG 0.624040 7.3:-61736565 None:intergenic
AAAGAGACCAAACCCCACCT+TGG 0.627049 7.3:+61734676 MS.gene04595:CDS
GTGGAATGAGCAGTATACTT+GGG 0.627653 7.3:+61735878 MS.gene04595:CDS
TGGATGTTGGTTCCCACATG+TGG 0.629071 7.3:+61736312 MS.gene04595:CDS
CTAACAAAGAGGAACTGCTA+GGG 0.630417 7.3:+61735463 MS.gene04595:CDS
TCTTGCAAATATTAGGTCGA+AGG 0.630876 7.3:+61735197 MS.gene04595:CDS
CTTTGCTACACAATAAGCAT+CGG 0.631955 7.3:-61735802 None:intergenic
CGATGAAATCAAATAATGGG+AGG 0.632153 7.3:+61735772 MS.gene04595:CDS
GATCGTCTGAGAAGTATCGC+CGG 0.633165 7.3:+61736683 MS.gene04595:CDS
GATACTGCATTTGCTCAACA+AGG 0.633581 7.3:-61734738 None:intergenic
TTTGAAACAACAAGATGCAG+AGG 0.633933 7.3:+61734629 None:intergenic
CTCCAGGCTTATCACCACCA+TGG 0.635088 7.3:-61735959 None:intergenic
ATCAAATCCTCATTCCACAT+CGG 0.635499 7.3:-61735378 None:intergenic
AAGTATTGGAGTTCTTGAAG+TGG 0.644135 7.3:+61735722 MS.gene04595:CDS
ACTCTTCATCTAGTTCGTCA+GGG 0.644466 7.3:-61736610 None:intergenic
GATGAAATCAAATAATGGGA+GGG 0.644856 7.3:+61735773 MS.gene04595:CDS
GAATGAGCAGTATACTTGGG+AGG 0.645094 7.3:+61735881 MS.gene04595:CDS
GTATTGGAGTTCTTGAAGTG+GGG 0.645952 7.3:+61735724 MS.gene04595:CDS
CAGAGACCTTACCACCAAGG+TGG 0.649836 7.3:-61734690 None:intergenic
TAGGATACAAACTGTTGTCG+GGG 0.649861 7.3:+61736706 MS.gene04595:CDS
TTTGAGGGTTAATGTGATCG+AGG 0.650146 7.3:+61735245 MS.gene04595:CDS
TAGGGTTGCGCCTAACAAAG+AGG 0.652011 7.3:+61735452 MS.gene04595:CDS
ATGAGGGTCTGTCTAGAAGG+TGG 0.652057 7.3:+61735627 MS.gene04595:CDS
AACCTCCTGAAGAAATTGAG+TGG 0.658154 7.3:-61736920 None:intergenic
CAAGACCTTCTGACATCGTG+AGG 0.659186 7.3:+61736651 MS.gene04595:CDS
GTTGGATGAAGAACAAGAAG+CGG 0.659701 7.3:-61736062 None:intergenic
TGAGCCACCGTTGAGAAAGG+AGG 0.666930 7.3:+61736274 MS.gene04595:CDS
TTTATGTGTTGAGACATCCA+AGG 0.671355 7.3:+61736873 MS.gene04595:CDS
TCTTCCACACTCAAAATCAG+TGG 0.671716 7.3:-61735429 None:intergenic
CTCCAGAGACCTTACCACCA+AGG 0.672025 7.3:-61734693 None:intergenic
TAAGATATGAATCAGAACTG+TGG 0.676247 7.3:-61736444 None:intergenic
GTAGGAGTATCAATCCGATG+TGG 0.682079 7.3:+61735364 MS.gene04595:CDS
GATAACTGTCACTTGCACCA+TGG 0.683890 7.3:+61735942 MS.gene04595:CDS
CTTCTTCTCGAAATGCCTCG+TGG 0.684350 7.3:-61734860 None:intergenic
ATCTCAATGAGATTCCGAAG+AGG 0.685604 7.3:+61735007 MS.gene04595:CDS
TCTTCTCATACTCCACATGT+GGG 0.689277 7.3:-61736324 None:intergenic
GAGACCTTACCACCAAGGTG+GGG 0.689512 7.3:-61734688 None:intergenic
GAGAGACGTGTGTCCATGTG+AGG 0.692622 7.3:-61736569 None:intergenic
GTCTGAGAAGTATCGCCGGT+AGG 0.699160 7.3:+61736687 MS.gene04595:CDS
ACAAACCTGTGAACACTAGG+TGG 0.699365 7.3:+61735529 MS.gene04595:CDS
GGCGCCAGAGGACTATCAGG+AGG 0.702158 7.3:-61735033 None:intergenic
GTATACTGCTCATTCCACCT+CGG 0.723662 7.3:-61735873 None:intergenic
AACTGTCACTTGCACCATGG+TGG 0.724351 7.3:+61735945 MS.gene04595:CDS
TCATCGATAGCTTTGCACCG+AGG 0.746528 7.3:+61735856 MS.gene04595:CDS
CATGGTGGTGATAAGCCTGG+AGG 0.753318 7.3:+61735960 MS.gene04595:CDS
TCCTCCAATCTATACCACTG+CGG 0.756616 7.3:-61735054 None:intergenic
TGATAAGGGAAGATTCCCGG+AGG 0.760486 7.3:+61735287 MS.gene04595:CDS
GTAATTACAAAGGTACCACG+AGG 0.815880 7.3:+61734845 MS.gene04595:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAATGCAGTATCTTTATGTT+AGG + chr7.3:61734749-61734768 MS.gene04595:CDS 25.0%
! AATGCAGTATCTTTATGTTA+GGG + chr7.3:61734750-61734769 MS.gene04595:CDS 25.0%
!! TGAAAAGCATGTTGTTATTA+TGG + chr7.3:61735560-61735579 MS.gene04595:CDS 25.0%
!! TTTGTGAAGGATGATTTTAT+CGG + chr7.3:61734970-61734989 MS.gene04595:CDS 25.0%
AAGAGGTAAAGGAAAATTGT+TGG - chr7.3:61736506-61736525 None:intergenic 30.0%
ATGCCGATGAAATCAAATAA+TGG + chr7.3:61735768-61735787 MS.gene04595:CDS 30.0%
GGACAAAGAGATTCAAAAAT+CGG + chr7.3:61735981-61736000 MS.gene04595:CDS 30.0%
TAAGATATGAATCAGAACTG+TGG - chr7.3:61736447-61736466 None:intergenic 30.0%
TCTTTCAACAGAAAATCTTC+TGG - chr7.3:61734661-61734680 None:intergenic 30.0%
TGCCGATGAAATCAAATAAT+GGG + chr7.3:61735769-61735788 MS.gene04595:CDS 30.0%
! AAGCATGTTGTTATTATGGA+AGG + chr7.3:61735564-61735583 MS.gene04595:CDS 30.0%
! AGCATGTTGTTATTATGGAA+GGG + chr7.3:61735565-61735584 MS.gene04595:CDS 30.0%
! ATGAAATCAAATAATGGGAG+GGG + chr7.3:61735774-61735793 MS.gene04595:CDS 30.0%
! ATTGTTGGTAAGATAAGTTC+AGG - chr7.3:61736491-61736510 None:intergenic 30.0%
! CTCCCATTATTTGATTTCAT+CGG - chr7.3:61735774-61735793 None:intergenic 30.0%
! GAAAGATAAGGATTTTGTGA+AGG + chr7.3:61734957-61734976 MS.gene04595:CDS 30.0%
! GATGAAATCAAATAATGGGA+GGG + chr7.3:61735773-61735792 MS.gene04595:CDS 30.0%
! GTTTATGTGAAGGCAATTTT+GGG + chr7.3:61735309-61735328 MS.gene04595:CDS 30.0%
! TGAGGTTTTTGTGAAAGATA+AGG + chr7.3:61734945-61734964 MS.gene04595:CDS 30.0%
! TTCCTTTACCTCTTTTTGAT+TGG + chr7.3:61736512-61736531 MS.gene04595:CDS 30.0%
! TTGTTGGTAAGATAAGTTCA+GGG - chr7.3:61736490-61736509 None:intergenic 30.0%
!!! AGCCAATTTTTTCAGAATCA+TGG + chr7.3:61736352-61736371 MS.gene04595:CDS 30.0%
!!! CAATTTTTTCAGAATCATGG+GGG + chr7.3:61736355-61736374 MS.gene04595:CDS 30.0%
!!! CCAATTTTTTCAGAATCATG+GGG + chr7.3:61736354-61736373 MS.gene04595:CDS 30.0%
!!! GCCAATTTTTTCAGAATCAT+GGG + chr7.3:61736353-61736372 MS.gene04595:CDS 30.0%
!!! TTTTTGCTTTTTCGAAGGAT+CGG + chr7.3:61734905-61734924 MS.gene04595:CDS 30.0%
AAGAGATTCAAAAATCGGCA+AGG + chr7.3:61735986-61736005 MS.gene04595:CDS 35.0%
ACCAAACTCCAATCAAAAAG+AGG - chr7.3:61736523-61736542 None:intergenic 35.0%
AGAAGAAGACTAATCCTGAA+TGG + chr7.3:61734875-61734894 MS.gene04595:CDS 35.0%
AGCAAAGTATGGACAGAAAT+GGG + chr7.3:61735818-61735837 MS.gene04595:CDS 35.0%
ATCAAATCCTCATTCCACAT+CGG - chr7.3:61735381-61735400 None:intergenic 35.0%
CAAGCTTGACTTCAACATAA+GGG - chr7.3:61734825-61734844 None:intergenic 35.0%
CTCCAATCAAAAAGAGGTAA+AGG - chr7.3:61736517-61736536 None:intergenic 35.0%
CTGATGCTCTTGCAAATATT+AGG + chr7.3:61735190-61735209 MS.gene04595:CDS 35.0%
CTTTGCTACACAATAAGCAT+CGG - chr7.3:61735805-61735824 None:intergenic 35.0%
GAAAATGGGAGAAATTCAAC+TGG + chr7.3:61736094-61736113 MS.gene04595:CDS 35.0%
GAATGAGGATTTGATGTTTG+TGG + chr7.3:61735386-61735405 MS.gene04595:CDS 35.0%
GCTTATTGTGTAGCAAAGTA+TGG + chr7.3:61735807-61735826 MS.gene04595:CDS 35.0%
GGATGAATGTAATGCATCTT+GGG - chr7.3:61736182-61736201 None:intergenic 35.0%
TAGCAAAGTATGGACAGAAA+TGG + chr7.3:61735817-61735836 MS.gene04595:CDS 35.0%
TCTTGCAAATATTAGGTCGA+AGG + chr7.3:61735197-61735216 MS.gene04595:CDS 35.0%
TCTTTATGTTAGGGTTGTGA+AGG + chr7.3:61734759-61734778 MS.gene04595:CDS 35.0%
TGCAAGCAGAATTCATATGA+GGG + chr7.3:61735611-61735630 MS.gene04595:CDS 35.0%
TGGATGAATGTAATGCATCT+TGG - chr7.3:61736183-61736202 None:intergenic 35.0%
TGTATCTATCTCCTAAGCTT+TGG + chr7.3:61735220-61735239 MS.gene04595:CDS 35.0%
TGTTATTCCCTTACAGATGA+TGG + chr7.3:61735491-61735510 MS.gene04595:CDS 35.0%
TTCAACAGAAAATCTTCTGG+TGG - chr7.3:61734658-61734677 None:intergenic 35.0%
TTCTTGTTCTTCATCCAACT+GGG + chr7.3:61736066-61736085 MS.gene04595:CDS 35.0%
TTGCAAGCAGAATTCATATG+AGG + chr7.3:61735610-61735629 MS.gene04595:CDS 35.0%
TTGGAGTTTGGTACTATAGA+TGG + chr7.3:61736531-61736550 MS.gene04595:CDS 35.0%
TTTATGTGTTGAGACATCCA+AGG + chr7.3:61736873-61736892 MS.gene04595:CDS 35.0%
! AGAAGGTGGTTATCATGTTT+TGG + chr7.3:61735641-61735660 MS.gene04595:CDS 35.0%
! AGTATTGGAGTTCTTGAAGT+GGG + chr7.3:61735723-61735742 MS.gene04595:CDS 35.0%
! ATGATTTTATCGGTCGTGTT+TGG + chr7.3:61734980-61734999 MS.gene04595:CDS 35.0%
! CCCCATGATTCTGAAAAAAT+TGG - chr7.3:61736357-61736376 None:intergenic 35.0%
! CGATGAAATCAAATAATGGG+AGG + chr7.3:61735772-61735791 MS.gene04595:CDS 35.0%
! GATTAATTGCTGTTGGAAAG+TGG + chr7.3:61736387-61736406 MS.gene04595:CDS 35.0%
! GCATGTTGTTATTATGGAAG+GGG + chr7.3:61735566-61735585 MS.gene04595:CDS 35.0%
! GGTTTATGTGAAGGCAATTT+TGG + chr7.3:61735308-61735327 MS.gene04595:CDS 35.0%
! GGTTTTTCCAATTGCAGATT+TGG - chr7.3:61736418-61736437 None:intergenic 35.0%
! GTCAAGCTTGGTAATTACAA+AGG + chr7.3:61734835-61734854 MS.gene04595:CDS 35.0%
! TCCTAAGCTTTGGTATTTGA+GGG + chr7.3:61735230-61735249 MS.gene04595:CDS 35.0%
! TGAAATCAAATAATGGGAGG+GGG + chr7.3:61735775-61735794 MS.gene04595:CDS 35.0%
!! AAGTATTGGAGTTCTTGAAG+TGG + chr7.3:61735722-61735741 MS.gene04595:CDS 35.0%
!! ACCTCTTTTTGATTGGAGTT+TGG + chr7.3:61736519-61736538 MS.gene04595:CDS 35.0%
!! GATTTTGAGTGTGGAAGATA+GGG + chr7.3:61735434-61735453 MS.gene04595:CDS 35.0%
!! TGATTTTGAGTGTGGAAGAT+AGG + chr7.3:61735433-61735452 MS.gene04595:CDS 35.0%
!! TTGAGTGGATTAATTGCTGT+TGG + chr7.3:61736380-61736399 MS.gene04595:CDS 35.0%
!!! TCAGGTTTTTGCTTTTTCGA+AGG + chr7.3:61734900-61734919 MS.gene04595:CDS 35.0%
AAAATCAGTGGCTCCTCAAA+CGG - chr7.3:61735420-61735439 None:intergenic 40.0%
AACAGAAAATCTTCTGGTGG+AGG - chr7.3:61734655-61734674 None:intergenic 40.0%
AACCTCCTGAAGAAATTGAG+TGG - chr7.3:61736923-61736942 None:intergenic 40.0%
AAGAAATTGAGTGGCACAGA+AGG - chr7.3:61736914-61736933 None:intergenic 40.0%
ACCCTCAAATACCAAAGCTT+AGG - chr7.3:61735234-61735253 None:intergenic 40.0%
AGAAGAGCCACAACTTGAAA+TGG - chr7.3:61736845-61736864 None:intergenic 40.0%
AGTGGGGATATTGAATGCTT+CGG + chr7.3:61735740-61735759 MS.gene04595:CDS 40.0%
AGTGGTATAGATTGGAGGAT+AGG + chr7.3:61735058-61735077 MS.gene04595:CDS 40.0%
ATCACAAACCTGTGAACACT+AGG + chr7.3:61735526-61735545 MS.gene04595:CDS 40.0%
ATCTCAATGAGATTCCGAAG+AGG + chr7.3:61735007-61735026 MS.gene04595:CDS 40.0%
ATGAAGAACAAGAAGCGGAT+AGG - chr7.3:61736060-61736079 None:intergenic 40.0%
ATTGCCTTCACATAAACCTC+CGG - chr7.3:61735306-61735325 None:intergenic 40.0%
CATTTGCTCAACAAGGTCAT+AGG - chr7.3:61734734-61734753 None:intergenic 40.0%
CCAAGCTTGACTTCAACATA+AGG - chr7.3:61734826-61734845 None:intergenic 40.0%
CCAATTGTAATGACAGTGCA+CGG - chr7.3:61735915-61735934 None:intergenic 40.0%
CCTTATGTTGAAGTCAAGCT+TGG + chr7.3:61734823-61734842 MS.gene04595:CDS 40.0%
CTAACAAAGAGGAACTGCTA+GGG + chr7.3:61735463-61735482 MS.gene04595:CDS 40.0%
CTTCTTGTTCTTCATCCAAC+TGG + chr7.3:61736065-61736084 MS.gene04595:CDS 40.0%
GAATCAGAACTGTGGTGATA+GGG - chr7.3:61736439-61736458 None:intergenic 40.0%
GACAACAGTTTGTATCCTAC+CGG - chr7.3:61736705-61736724 None:intergenic 40.0%
GACTAATCCTGAATGGAATC+AGG + chr7.3:61734882-61734901 MS.gene04595:CDS 40.0%
GAGAAATTCAACTGGCTGTA+AGG + chr7.3:61736102-61736121 MS.gene04595:CDS 40.0%
GAGTTTGGTACTATAGATGG+AGG + chr7.3:61736534-61736553 MS.gene04595:CDS 40.0%
GATACTGCATTTGCTCAACA+AGG - chr7.3:61734741-61734760 None:intergenic 40.0%
GCAAAAACCTGATTCCATTC+AGG - chr7.3:61734892-61734911 None:intergenic 40.0%
GGTAGGATACAAACTGTTGT+CGG + chr7.3:61736704-61736723 MS.gene04595:CDS 40.0%
GGTTTGACCAAATCTGCAAT+TGG + chr7.3:61736408-61736427 MS.gene04595:CDS 40.0%
GTAGGATACAAACTGTTGTC+GGG + chr7.3:61736705-61736724 MS.gene04595:CDS 40.0%
GTATTGGAGTTCTTGAAGTG+GGG + chr7.3:61735724-61735743 MS.gene04595:CDS 40.0%
GTGGAATATATGCTGGATGT+TGG + chr7.3:61736299-61736318 MS.gene04595:CDS 40.0%
GTGGAATGAGCAGTATACTT+GGG + chr7.3:61735878-61735897 MS.gene04595:CDS 40.0%
GTTGGATGAAGAACAAGAAG+CGG - chr7.3:61736065-61736084 None:intergenic 40.0%
TAGGATACAAACTGTTGTCG+GGG + chr7.3:61736706-61736725 MS.gene04595:CDS 40.0%
TATCAATCCGATGTGGAATG+AGG + chr7.3:61735371-61735390 MS.gene04595:CDS 40.0%
TATGGAAGGGGACAAAAAGA+AGG + chr7.3:61735578-61735597 MS.gene04595:CDS 40.0%
TCTCAATGAGATTCCGAAGA+GGG + chr7.3:61735008-61735027 MS.gene04595:CDS 40.0%
TCTTCCACACTCAAAATCAG+TGG - chr7.3:61735432-61735451 None:intergenic 40.0%
TCTTCTCATACTCCACATGT+GGG - chr7.3:61736327-61736346 None:intergenic 40.0%
TCTTGTTCTTCATCCAACTG+GGG + chr7.3:61736067-61736086 MS.gene04595:CDS 40.0%
TGAATCAGAACTGTGGTGAT+AGG - chr7.3:61736440-61736459 None:intergenic 40.0%
TTCTTCTCATACTCCACATG+TGG - chr7.3:61736328-61736347 None:intergenic 40.0%
TTTGAATCTCTTTGTCCTCC+AGG - chr7.3:61735978-61735997 None:intergenic 40.0%
TTTGAGGGTTAATGTGATCG+AGG + chr7.3:61735245-61735264 MS.gene04595:CDS 40.0%
! AACTCTTCATCTAGTTCGTC+AGG - chr7.3:61736614-61736633 None:intergenic 40.0%
! ACTCTTCATCTAGTTCGTCA+GGG - chr7.3:61736613-61736632 None:intergenic 40.0%
! CTCCTAAGCTTTGGTATTTG+AGG + chr7.3:61735229-61735248 MS.gene04595:CDS 40.0%
! GAATAGCACAAAAAGTGCAG+TGG - chr7.3:61736789-61736808 None:intergenic 40.0%
!! GTAATTACAAAGGTACCACG+AGG + chr7.3:61734845-61734864 MS.gene04595:CDS 40.0%
!! TGTGACTCCATTTCAAGTTG+TGG + chr7.3:61736835-61736854 MS.gene04595:CDS 40.0%
!! TTTTGGGAAATCAGACCTTG+AGG + chr7.3:61735325-61735344 MS.gene04595:CDS 40.0%
!! TTTTTCGAAGGATCGGATTC+AGG + chr7.3:61734912-61734931 MS.gene04595:CDS 40.0%
ACAAACCTGTGAACACTAGG+TGG + chr7.3:61735529-61735548 MS.gene04595:CDS 45.0%
ACAAACTGTTGTCGGGGATT+TGG + chr7.3:61736712-61736731 MS.gene04595:CDS 45.0%
AGCATGCAATCAGTTCTTGC+AGG - chr7.3:61736947-61736966 None:intergenic 45.0%
AGGAAGAGTGATAAGGTGAG+AGG + chr7.3:61735078-61735097 MS.gene04595:CDS 45.0%
ATTCCCGGAGGTTTATGTGA+AGG + chr7.3:61735299-61735318 MS.gene04595:CDS 45.0%
CAGCTGTGGAAGTCAAGTAT+TGG + chr7.3:61735708-61735727 MS.gene04595:CDS 45.0%
CATATGAGGGTCTGTCTAGA+AGG + chr7.3:61735624-61735643 MS.gene04595:CDS 45.0%
CCAACTGGGGTGAAGAAAAT+GGG + chr7.3:61736080-61736099 MS.gene04595:CDS 45.0%
CCGTGCACTGTCATTACAAT+TGG + chr7.3:61735912-61735931 MS.gene04595:CDS 45.0%
CCTAACAAAGAGGAACTGCT+AGG + chr7.3:61735462-61735481 MS.gene04595:CDS 45.0%
CCTAGCAGTTCCTCTTTGTT+AGG - chr7.3:61735465-61735484 None:intergenic 45.0%
CTACCTGCGAAAGATGTTAC+TGG + chr7.3:61734790-61734809 MS.gene04595:CDS 45.0%
CTGAGAGATTCTAGTCCTCA+AGG - chr7.3:61735343-61735362 None:intergenic 45.0%
CTTCCAGTAACATCTTTCGC+AGG - chr7.3:61734796-61734815 None:intergenic 45.0%
GAAGAGTGATAAGGTGAGAG+GGG + chr7.3:61735080-61735099 MS.gene04595:CDS 45.0%
GAATGAGCAGTATACTTGGG+AGG + chr7.3:61735881-61735900 MS.gene04595:CDS 45.0%
GGAAGAGTGATAAGGTGAGA+GGG + chr7.3:61735079-61735098 MS.gene04595:CDS 45.0%
GGACTAGAATCTCTCAGAGT+AGG + chr7.3:61735346-61735365 MS.gene04595:CDS 45.0%
GGAGGATAGGAAGAGTGATA+AGG + chr7.3:61735071-61735090 MS.gene04595:CDS 45.0%
GGATTTGATGTTTGTGGCTG+CGG + chr7.3:61735392-61735411 MS.gene04595:CDS 45.0%
GGGAATCTTCCCTTATCAGA+CGG - chr7.3:61735285-61735304 None:intergenic 45.0%
GGTGGAATGAGCAGTATACT+TGG + chr7.3:61735877-61735896 MS.gene04595:CDS 45.0%
GTATACTGCTCATTCCACCT+CGG - chr7.3:61735876-61735895 None:intergenic 45.0%
GTCTGATAAGGGAAGATTCC+CGG + chr7.3:61735284-61735303 MS.gene04595:CDS 45.0%
GTGGGGATATTGAATGCTTC+GGG + chr7.3:61735741-61735760 MS.gene04595:CDS 45.0%
TAATGCATCTTGGGCAGCAA+TGG - chr7.3:61736173-61736192 None:intergenic 45.0%
TCCAACTGGGGTGAAGAAAA+TGG + chr7.3:61736079-61736098 MS.gene04595:CDS 45.0%
TCCTCCAATCTATACCACTG+CGG - chr7.3:61735057-61735076 None:intergenic 45.0%
TGCCACTCAATTTCTTCAGG+AGG + chr7.3:61736918-61736937 MS.gene04595:CDS 45.0%
TTGAACCACCTAGTGTTCAC+AGG - chr7.3:61735537-61735556 None:intergenic 45.0%
TTGCCTTCACATAAACCTCC+GGG - chr7.3:61735305-61735324 None:intergenic 45.0%
! ACAAAAAGTGCAGTGGCTCT+TGG - chr7.3:61736782-61736801 None:intergenic 45.0%
! ATGTCAGAAGGTCTTGTGGT+TGG - chr7.3:61736647-61736666 None:intergenic 45.0%
! CTGTGCCACTCAATTTCTTC+AGG + chr7.3:61736915-61736934 MS.gene04595:CDS 45.0%
! GATAACTGTCACTTGCACCA+TGG + chr7.3:61735942-61735961 MS.gene04595:CDS 45.0%
!! GTAGGAGTATCAATCCGATG+TGG + chr7.3:61735364-61735383 MS.gene04595:CDS 45.0%
!! TTCCCTTACAGATGATGGAC+CGG + chr7.3:61735496-61735515 MS.gene04595:CDS 45.0%
!!! AGAATCATGGGGGTTTTGAG+TGG + chr7.3:61736365-61736384 MS.gene04595:CDS 45.0%
AAAGAGACCAAACCCCACCT+TGG + chr7.3:61734676-61734695 MS.gene04595:CDS 50.0%
AGAGACCTTACCACCAAGGT+GGG - chr7.3:61734692-61734711 None:intergenic 50.0%
ATCTTTCGCAGGTAGCTCCT+TGG - chr7.3:61734785-61734804 None:intergenic 50.0%
ATGAGGGTCTGTCTAGAAGG+TGG + chr7.3:61735627-61735646 MS.gene04595:CDS 50.0%
CAAGACCTTCTGACATCGTG+AGG + chr7.3:61736651-61736670 MS.gene04595:CDS 50.0%
CAAGTTGTGGCTCTTCTCAC+TGG + chr7.3:61736848-61736867 MS.gene04595:CDS 50.0%
CACGATGTCAGAAGGTCTTG+TGG - chr7.3:61736651-61736670 None:intergenic 50.0%
CAGGTTTGTGATCGAGTCTC+CGG - chr7.3:61735518-61735537 None:intergenic 50.0%
CAGTCTCGAGTGTGGAAAGA+CGG - chr7.3:61736019-61736038 None:intergenic 50.0%
CGGTGCAAAGCTATCGATGA+TGG - chr7.3:61735856-61735875 None:intergenic 50.0%
CTATCAGGAGGAACCCTCTT+CGG - chr7.3:61735024-61735043 None:intergenic 50.0%
CTCCGGTCCATCATCTGTAA+GGG - chr7.3:61735501-61735520 None:intergenic 50.0%
CTTCTTCTCGAAATGCCTCG+TGG - chr7.3:61734863-61734882 None:intergenic 50.0%
GAAGGATCGGATTCAGGCTT+CGG + chr7.3:61734918-61734937 MS.gene04595:CDS 50.0%
GACTTGCAGCCGTCTGATAA+GGG + chr7.3:61735273-61735292 MS.gene04595:CDS 50.0%
GATTCAGGCTTCGGTTCTTG+AGG + chr7.3:61734927-61734946 MS.gene04595:CDS 50.0%
GGAAGCTTGTGACGAAACCT+TGG - chr7.3:61736893-61736912 None:intergenic 50.0%
GGAGGTCGTGGAATATATGC+TGG + chr7.3:61736292-61736311 MS.gene04595:CDS 50.0%
GGTACTATAGATGGAGGCCT+AGG + chr7.3:61736540-61736559 MS.gene04595:CDS 50.0%
GGTTAATGTGATCGAGGCAC+AGG + chr7.3:61735251-61735270 MS.gene04595:CDS 50.0%
TAGGGTTGCGCCTAACAAAG+AGG + chr7.3:61735452-61735471 MS.gene04595:CDS 50.0%
TCCACGACCTCCTTTCTCAA+CGG - chr7.3:61736284-61736303 None:intergenic 50.0%
TCTCCGGTCCATCATCTGTA+AGG - chr7.3:61735502-61735521 None:intergenic 50.0%
TGATAAGGGAAGATTCCCGG+AGG + chr7.3:61735287-61735306 MS.gene04595:CDS 50.0%
TGTTAGGGTTGTGAAGGCCA+AGG + chr7.3:61734765-61734784 MS.gene04595:CDS 50.0%
! AACTGTCACTTGCACCATGG+TGG + chr7.3:61735945-61735964 MS.gene04595:CDS 50.0%
! AGCTGATGAAGCGTTTCCTG+AGG + chr7.3:61735134-61735153 MS.gene04595:CDS 50.0%
! ATCTAGTTCGTCAGGGTGTG+CGG - chr7.3:61736606-61736625 None:intergenic 50.0%
! CCCATTTTCTTCACCCCAGT+TGG - chr7.3:61736083-61736102 None:intergenic 50.0%
! CTGATGCTGGCTGTTTGGAT+GGG + chr7.3:61735105-61735124 MS.gene04595:CDS 50.0%
! TCATCGATAGCTTTGCACCG+AGG + chr7.3:61735856-61735875 MS.gene04595:CDS 50.0%
! TCCACAGCTGTTTCGCAGTA+GGG - chr7.3:61735698-61735717 None:intergenic 50.0%
! TCGAGCTGGCTTACGGTTAA+TGG - chr7.3:61736203-61736222 None:intergenic 50.0%
! TTCCACAGCTGTTTCGCAGT+AGG - chr7.3:61735699-61735718 None:intergenic 50.0%
!! GATCGTCTGAGAAGTATCGC+CGG + chr7.3:61736683-61736702 MS.gene04595:CDS 50.0%
!! TGGATGTTGGTTCCCACATG+TGG + chr7.3:61736312-61736331 MS.gene04595:CDS 50.0%
!!! GGAGCCACTGATTTTGAGTG+TGG + chr7.3:61735425-61735444 MS.gene04595:CDS 50.0%
ACCGTTGAGAAAGGAGGTCG+TGG + chr7.3:61736280-61736299 MS.gene04595:CDS 55.0%
ACGACCTCCTTTCTCAACGG+TGG - chr7.3:61736281-61736300 None:intergenic 55.0%
AGACGTGTGTCCATGTGAGG+TGG - chr7.3:61736569-61736588 None:intergenic 55.0%
AGGGTGTGCGGAATCAGCAT+GGG - chr7.3:61736594-61736613 None:intergenic 55.0%
CAGAGACCTTACCACCAAGG+TGG - chr7.3:61734693-61734712 None:intergenic 55.0%
CGCATCCTCACGATGTCAGA+AGG - chr7.3:61736659-61736678 None:intergenic 55.0%
CTCAGCACGGCTAAGTCTCA+TGG - chr7.3:61736258-61736277 None:intergenic 55.0%
CTCCAGAGACCTTACCACCA+AGG - chr7.3:61734696-61734715 None:intergenic 55.0%
CTCCAGGCTTATCACCACCA+TGG - chr7.3:61735962-61735981 None:intergenic 55.0%
CTTACCACCAAGGTGGGGTT+TGG - chr7.3:61734686-61734705 None:intergenic 55.0%
GACGTGTGTCCATGTGAGGT+GGG - chr7.3:61736568-61736587 None:intergenic 55.0%
GACTCGATCAGTCTCGAGTG+TGG - chr7.3:61736027-61736046 None:intergenic 55.0%
GACTGCAGTCTTTGCTGAGC+TGG + chr7.3:61736750-61736769 MS.gene04595:CDS 55.0%
GAGACCTTACCACCAAGGTG+GGG - chr7.3:61734691-61734710 None:intergenic 55.0%
GAGAGACGTGTGTCCATGTG+AGG - chr7.3:61736572-61736591 None:intergenic 55.0%
GCCGCAGTGGTATAGATTGG+AGG + chr7.3:61735053-61735072 MS.gene04595:CDS 55.0%
GGACTTGCAGCCGTCTGATA+AGG + chr7.3:61735272-61735291 MS.gene04595:CDS 55.0%
GGTTCCTCCTGATAGTCCTC+TGG + chr7.3:61735029-61735048 MS.gene04595:CDS 55.0%
TAAGCCAGCTCGACAGTCTG+AGG + chr7.3:61736210-61736229 MS.gene04595:CDS 55.0%
TGAGCCACCGTTGAGAAAGG+AGG + chr7.3:61736274-61736293 MS.gene04595:CDS 55.0%
TGCTGAGCCACCGTTGAGAA+AGG + chr7.3:61736271-61736290 MS.gene04595:CDS 55.0%
TTCTCAACGGTGGCTCAGCA+CGG - chr7.3:61736271-61736290 None:intergenic 55.0%
! ATGAAGCGTTTCCTGAGGCG+TGG + chr7.3:61735139-61735158 MS.gene04595:CDS 55.0%
! CAAACCCCACCTTGGTGGTA+AGG + chr7.3:61734684-61734703 MS.gene04595:CDS 55.0%
! CACCATGGTGGTGATAAGCC+TGG + chr7.3:61735957-61735976 MS.gene04595:CDS 55.0%
! CACCTTGGTGGTAAGGTCTC+TGG + chr7.3:61734691-61734710 MS.gene04595:CDS 55.0%
! CAGACTGTCGAGCTGGCTTA+CGG - chr7.3:61736210-61736229 None:intergenic 55.0%
! CATGGTGGTGATAAGCCTGG+AGG + chr7.3:61735960-61735979 MS.gene04595:CDS 55.0%
! GCTGATGCTGGCTGTTTGGA+TGG + chr7.3:61735104-61735123 MS.gene04595:CDS 55.0%
! TCGATAGCTTTGCACCGAGG+TGG + chr7.3:61735859-61735878 MS.gene04595:CDS 55.0%
!! GTCTGAGAAGTATCGCCGGT+AGG + chr7.3:61736687-61736706 MS.gene04595:CDS 55.0%
CAGGGTGTGCGGAATCAGCA+TGG - chr7.3:61736595-61736614 None:intergenic 60.0%
GAGACCAAACCCCACCTTGG+TGG + chr7.3:61734679-61734698 MS.gene04595:CDS 60.0%
GATGCCTCAGACTGTCGAGC+TGG - chr7.3:61736217-61736236 None:intergenic 60.0%
GCCCTACTGCGAAACAGCTG+TGG + chr7.3:61735694-61735713 MS.gene04595:CDS 60.0%
GGCGCCGCAGTGGTATAGAT+TGG + chr7.3:61735050-61735069 MS.gene04595:CDS 60.0%
GTCGGGGATTTGGCGACTCA+AGG + chr7.3:61736722-61736741 MS.gene04595:CDS 60.0%
GTTTCCTGAGGCGTGGCACT+CGG + chr7.3:61735146-61735165 MS.gene04595:CDS 60.0%
TCCATGTGAGGTGGGTGCCT+AGG - chr7.3:61736560-61736579 None:intergenic 60.0%
TGTGGCTGCGGAACCGTTTG+AGG + chr7.3:61735404-61735423 MS.gene04595:CDS 60.0%
! GGGAGCTGATGCTGGCTGTT+TGG + chr7.3:61735100-61735119 MS.gene04595:CDS 60.0%
ATAGTCCTCTGGCGCCGCAG+TGG + chr7.3:61735040-61735059 MS.gene04595:CDS 65.0%
CTATACCACTGCGGCGCCAG+AGG - chr7.3:61735048-61735067 None:intergenic 65.0%
GCCTAGGCACCCACCTCACA+TGG + chr7.3:61736556-61736575 MS.gene04595:CDS 65.0%
GGCGCCAGAGGACTATCAGG+AGG - chr7.3:61735036-61735055 None:intergenic 65.0%
GGTGAGAGGGGAGCTGATGC+TGG + chr7.3:61735092-61735111 MS.gene04595:CDS 65.0%
TCGGATGCGGCGACGGTTAG+TGG + chr7.3:61735165-61735184 MS.gene04595:CDS 65.0%
TGAGGCGTGGCACTCGGATG+CGG + chr7.3:61735152-61735171 MS.gene04595:CDS 65.0%
TGCGGCGCCAGAGGACTATC+AGG - chr7.3:61735039-61735058 None:intergenic 65.0%
GCATCCGAGTGCCACGCCTC+AGG - chr7.3:61735153-61735172 None:intergenic 70.0%
GTGGCACTCGGATGCGGCGA+CGG + chr7.3:61735158-61735177 MS.gene04595:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 61734643 61736970 61734643 ID=MS.gene04595
chr7.3 mRNA 61734643 61736970 61734643 ID=MS.gene04595.t1;Parent=MS.gene04595
chr7.3 exon 61734643 61736970 61734643 ID=MS.gene04595.t1.exon1;Parent=MS.gene04595.t1
chr7.3 CDS 61734643 61736970 61734643 ID=cds.MS.gene04595.t1;Parent=MS.gene04595.t1
Gene Sequence

>MS.gene04595

ATGCAGAGGCCTCCACCAGAAGATTTTCTGTTGAAAGAGACCAAACCCCACCTTGGTGGTAAGGTCTCTGGAGACAAGCTTACAAGTACCTATGACCTTGTTGAGCAAATGCAGTATCTTTATGTTAGGGTTGTGAAGGCCAAGGAGCTACCTGCGAAAGATGTTACTGGAAGTTGTGACCCTTATGTTGAAGTCAAGCTTGGTAATTACAAAGGTACCACGAGGCATTTCGAGAAGAAGACTAATCCTGAATGGAATCAGGTTTTTGCTTTTTCGAAGGATCGGATTCAGGCTTCGGTTCTTGAGGTTTTTGTGAAAGATAAGGATTTTGTGAAGGATGATTTTATCGGTCGTGTTTGGTTTGATCTCAATGAGATTCCGAAGAGGGTTCCTCCTGATAGTCCTCTGGCGCCGCAGTGGTATAGATTGGAGGATAGGAAGAGTGATAAGGTGAGAGGGGAGCTGATGCTGGCTGTTTGGATGGGTACTCAAGCTGATGAAGCGTTTCCTGAGGCGTGGCACTCGGATGCGGCGACGGTTAGTGGTACTGATGCTCTTGCAAATATTAGGTCGAAGGTGTATCTATCTCCTAAGCTTTGGTATTTGAGGGTTAATGTGATCGAGGCACAGGACTTGCAGCCGTCTGATAAGGGAAGATTCCCGGAGGTTTATGTGAAGGCAATTTTGGGAAATCAGACCTTGAGGACTAGAATCTCTCAGAGTAGGAGTATCAATCCGATGTGGAATGAGGATTTGATGTTTGTGGCTGCGGAACCGTTTGAGGAGCCACTGATTTTGAGTGTGGAAGATAGGGTTGCGCCTAACAAAGAGGAACTGCTAGGGAAGTGTGTTATTCCCTTACAGATGATGGACCGGAGACTCGATCACAAACCTGTGAACACTAGGTGGTTCAATATTGAAAAGCATGTTGTTATTATGGAAGGGGACAAAAAGAAGGAAATTAAGTTTGCAAGCAGAATTCATATGAGGGTCTGTCTAGAAGGTGGTTATCATGTTTTGGATGAATCAACTCACTACAGTAGTGATCTTCGCCCTACTGCGAAACAGCTGTGGAAGTCAAGTATTGGAGTTCTTGAAGTGGGGATATTGAATGCTTCGGGTTTGATGCCGATGAAATCAAATAATGGGAGGGGGACTACCGATGCTTATTGTGTAGCAAAGTATGGACAGAAATGGGTGCGTACAAGAACCATCATCGATAGCTTTGCACCGAGGTGGAATGAGCAGTATACTTGGGAGGTTTTTGATCCGTGCACTGTCATTACAATTGGTGTATTCGATAACTGTCACTTGCACCATGGTGGTGATAAGCCTGGAGGACAAAGAGATTCAAAAATCGGCAAGGTAAGAATCCGTCTTTCCACACTCGAGACTGATCGAGTCTACACACATTCCTATCCGCTTCTTGTTCTTCATCCAACTGGGGTGAAGAAAATGGGAGAAATTCAACTGGCTGTAAGGTTTACTTGCTCTTCTTTGCTTAACATGATGCACATGTATTCAAATCCATTGCTGCCCAAGATGCATTACATTCATCCATTAACCGTAAGCCAGCTCGACAGTCTGAGGCATCAAGCTACTCAGATTGTTTCCATGAGACTTAGCCGTGCTGAGCCACCGTTGAGAAAGGAGGTCGTGGAATATATGCTGGATGTTGGTTCCCACATGTGGAGTATGAGAAGAAGCAAAGCCAATTTTTTCAGAATCATGGGGGTTTTGAGTGGATTAATTGCTGTTGGAAAGTGGTTTGACCAAATCTGCAATTGGAAAAACCCTATCACCACAGTTCTGATTCATATCTTATTTATAATACTTGTCATGTACCCTGAACTTATCTTACCAACAATTTTCCTTTACCTCTTTTTGATTGGAGTTTGGTACTATAGATGGAGGCCTAGGCACCCACCTCACATGGACACACGTCTCTCCCATGCTGATTCCGCACACCCTGACGAACTAGATGAAGAGTTCGACACGTTTCCAACCACAAGACCTTCTGACATCGTGAGGATGCGATACGATCGTCTGAGAAGTATCGCCGGTAGGATACAAACTGTTGTCGGGGATTTGGCGACTCAAGGCGAAAGACTGCAGTCTTTGCTGAGCTGGAGAGATCCAAGAGCCACTGCACTTTTTGTGCTATTCTGTTTGATTGCTGCTATTGTACTTTATGTGACTCCATTTCAAGTTGTGGCTCTTCTCACTGGAATTTATGTGTTGAGACATCCAAGGTTTCGTCACAAGCTTCCTTCTGTGCCACTCAATTTCTTCAGGAGGTTGCCTGCAAGAACTGATTGCATGCTTTGA
Protein sequence

>MS.gene04595.t1

MQRPPPEDFLLKETKPHLGGKVSGDKLTSTYDLVEQMQYLYVRVVKAKELPAKDVTGSCDPYVEVKLGNYKGTTRHFEKKTNPEWNQVFAFSKDRIQASVLEVFVKDKDFVKDDFIGRVWFDLNEIPKRVPPDSPLAPQWYRLEDRKSDKVRGELMLAVWMGTQADEAFPEAWHSDAATVSGTDALANIRSKVYLSPKLWYLRVNVIEAQDLQPSDKGRFPEVYVKAILGNQTLRTRISQSRSINPMWNEDLMFVAAEPFEEPLILSVEDRVAPNKEELLGKCVIPLQMMDRRLDHKPVNTRWFNIEKHVVIMEGDKKKEIKFASRIHMRVCLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLEVGILNASGLMPMKSNNGRGTTDAYCVAKYGQKWVRTRTIIDSFAPRWNEQYTWEVFDPCTVITIGVFDNCHLHHGGDKPGGQRDSKIGKVRIRLSTLETDRVYTHSYPLLVLHPTGVKKMGEIQLAVRFTCSSLLNMMHMYSNPLLPKMHYIHPLTVSQLDSLRHQATQIVSMRLSRAEPPLRKEVVEYMLDVGSHMWSMRRSKANFFRIMGVLSGLIAVGKWFDQICNWKNPITTVLIHILFIILVMYPELILPTIFLYLFLIGVWYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTTRPSDIVRMRYDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVLFCLIAAIVLYVTPFQVVALLTGIYVLRHPRFRHKLPSVPLNFFRRLPARTDCML