AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060530.t1 MTR_8g027375 97.023 571 17 0 1 571 1 571 0.0 1153
MS.gene060530.t1 MTR_3g462760 48.346 544 262 5 34 571 26 556 0.0 543
MS.gene060530.t1 MTR_5g069680 48.346 544 263 5 34 571 27 558 0.0 539
MS.gene060530.t1 MTR_7g062310 44.558 588 300 9 2 571 14 593 0.0 528
MS.gene060530.t1 MTR_4g015120 47.339 545 269 6 34 571 24 557 0.0 527
MS.gene060530.t1 MTR_5g081810 46.667 540 265 8 40 571 5 529 1.18e-177 512
MS.gene060530.t1 MTR_7g062250 47.207 555 268 10 33 571 33 578 1.75e-177 514
MS.gene060530.t1 MTR_7g058690 45.455 583 283 11 9 571 13 580 2.25e-177 513
MS.gene060530.t1 MTR_4g064530 48.080 547 260 10 23 555 33 569 9.35e-177 512
MS.gene060530.t1 MTR_5g083360 44.444 585 293 6 1 571 1 567 1.15e-176 511
MS.gene060530.t1 MTR_7g060460 46.168 561 279 9 28 571 27 581 1.25e-175 509
MS.gene060530.t1 MTR_7g458880 44.674 582 287 11 10 571 14 580 2.23e-175 508
MS.gene060530.t1 MTR_5g073210 43.617 564 307 7 13 571 3 560 5.37e-175 507
MS.gene060530.t1 MTR_5g020620 44.464 560 291 7 18 571 16 561 1.06e-173 503
MS.gene060530.t1 MTR_5g020600 43.717 565 298 8 14 571 15 566 2.78e-173 503
MS.gene060530.t1 MTR_4g064530 46.869 527 256 10 23 535 33 549 4.85e-161 471
MS.gene060530.t1 MTR_7g065970 42.561 578 313 8 5 571 1 570 3.25e-158 464
MS.gene060530.t1 MTR_2g008330 41.869 578 314 10 4 571 14 579 3.28e-158 464
MS.gene060530.t1 MTR_3g101640 42.133 572 314 10 10 571 7 571 2.60e-154 454
MS.gene060530.t1 MTR_4g019225 41.788 548 304 8 36 571 28 572 9.48e-153 450
MS.gene060530.t1 MTR_3g101635 44.195 534 282 10 31 555 24 550 2.84e-152 449
MS.gene060530.t1 MTR_7g065980 41.176 578 315 10 9 571 4 571 6.30e-150 443
MS.gene060530.t1 MTR_3g071890 45.691 499 263 5 33 527 32 526 2.69e-149 441
MS.gene060530.t1 MTR_8g091390 31.103 553 332 14 34 562 34 561 1.62e-67 229
MS.gene060530.t1 MTR_3g078740 30.249 562 334 19 30 549 22 567 3.24e-64 221
MS.gene060530.t1 MTR_3g078700 29.945 541 316 20 28 549 22 518 1.15e-55 196
MS.gene060530.t1 MTR_3g078730 29.511 532 320 17 34 549 25 517 9.58e-55 194
MS.gene060530.t1 MTR_5g081790 53.061 147 62 1 34 173 24 170 3.10e-51 182
MS.gene060530.t1 MTR_5g081790 37.500 280 151 8 258 529 157 420 9.07e-50 178
MS.gene060530.t1 MTR_4g101650 28.023 521 338 14 36 546 29 522 4.41e-47 174
MS.gene060530.t1 MTR_3g008580 27.122 542 352 15 5 536 8 516 6.99e-47 173
MS.gene060530.t1 MTR_1g090707 28.155 515 323 15 48 552 38 515 1.48e-43 164
MS.gene060530.t1 MTR_4g075690 24.638 552 373 13 12 559 8 520 3.24e-40 154
MS.gene060530.t1 MTR_1g026410 25.800 531 320 14 34 544 29 505 8.54e-39 150
MS.gene060530.t1 MTR_4g049390 25.591 508 337 13 28 531 20 490 8.06e-38 147
MS.gene060530.t1 MTR_8g479380 25.824 546 354 15 34 571 29 531 3.10e-37 145
MS.gene060530.t1 MTR_3g115050 25.731 513 343 11 34 544 30 506 5.02e-37 145
MS.gene060530.t1 MTR_7g051440 26.750 557 351 18 30 567 25 543 5.69e-37 145
MS.gene060530.t1 MTR_4g083210 26.471 544 344 17 21 551 11 511 1.98e-35 140
MS.gene060530.t1 MTR_4g048350 25.394 508 337 15 28 531 20 489 1.27e-34 137
MS.gene060530.t1 MTR_8g073840 37.912 182 74 3 34 214 30 173 2.17e-34 132
MS.gene060530.t1 MTR_4g075690 25.361 485 308 14 12 487 8 447 4.87e-34 134
MS.gene060530.t1 MTR_4g132320 27.593 511 310 17 34 531 31 494 6.99e-34 135
MS.gene060530.t1 MTR_8g479390 25.227 551 351 17 34 571 31 533 1.04e-33 135
MS.gene060530.t1 MTR_3g083450 24.777 561 353 20 35 566 27 547 2.95e-33 134
MS.gene060530.t1 MTR_3g083430 24.144 555 364 15 35 566 26 546 6.64e-33 133
MS.gene060530.t1 MTR_2g088080 25.150 501 335 10 34 531 30 493 7.37e-33 132
MS.gene060530.t1 MTR_5g018270 24.288 527 351 15 34 555 31 514 2.76e-32 131
MS.gene060530.t1 MTR_3g083440 24.687 559 356 18 35 566 26 546 2.78e-32 131
MS.gene060530.t1 MTR_3g083400 24.687 559 356 18 35 566 26 546 3.26e-32 130
MS.gene060530.t1 MTR_3g083390 24.687 559 356 18 35 566 26 546 5.90e-32 130
MS.gene060530.t1 MTR_4g083190 24.291 494 331 15 52 537 45 503 2.64e-31 128
MS.gene060530.t1 MTR_3g083410 24.675 539 341 18 55 566 10 510 1.58e-29 122
MS.gene060530.t1 MTR_7g058670 54.118 85 38 1 91 174 13 97 7.83e-28 107
MS.gene060530.t1 MTR_2g088080 24.775 444 294 10 91 531 6 412 1.43e-23 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060530.t1 AT2G46570 65.517 551 190 0 21 571 19 569 0.0 794
MS.gene060530.t1 AT2G46570 66.528 481 161 0 91 571 4 484 0.0 702
MS.gene060530.t1 AT5G01190 48.188 552 266 5 26 571 21 558 0.0 536
MS.gene060530.t1 AT5G05390 47.963 540 274 4 36 571 29 565 0.0 531
MS.gene060530.t1 AT2G38080 46.972 545 269 8 34 571 27 558 0.0 522
MS.gene060530.t1 AT2G40370 44.118 578 301 7 13 571 6 580 2.37e-180 521
MS.gene060530.t1 AT5G01190 48.381 525 255 4 53 571 30 544 8.02e-179 516
MS.gene060530.t1 AT5G58910 45.246 568 289 6 15 571 11 567 6.90e-178 514
MS.gene060530.t1 AT5G03260 45.878 558 282 8 21 571 13 557 9.28e-178 514
MS.gene060530.t1 AT5G58910 45.423 568 287 7 15 571 11 566 2.77e-177 513
MS.gene060530.t1 AT5G60020 44.655 580 291 12 14 571 6 577 8.50e-173 502
MS.gene060530.t1 AT2G30210 43.082 571 304 8 12 571 10 570 6.19e-172 499
MS.gene060530.t1 AT5G07130 45.027 553 280 9 35 571 25 569 3.64e-170 495
MS.gene060530.t1 AT5G58910 45.896 536 261 7 47 571 6 523 1.15e-169 492
MS.gene060530.t1 AT5G60020 45.554 551 271 11 43 571 2 545 2.86e-169 491
MS.gene060530.t1 AT2G29130 46.512 559 277 11 27 571 23 573 2.18e-168 490
MS.gene060530.t1 AT1G18140 44.658 571 277 13 28 571 23 581 9.46e-167 486
MS.gene060530.t1 AT5G09360 42.782 568 304 10 12 571 15 569 1.28e-154 455
MS.gene060530.t1 AT3G09220 43.364 535 275 9 36 554 28 550 1.01e-153 452
MS.gene060530.t1 AT5G60020 44.238 538 270 12 14 529 6 535 4.12e-153 451
MS.gene060530.t1 AT5G48100 42.806 556 290 10 12 555 8 547 2.86e-149 441
MS.gene060530.t1 AT5G01050 40.480 583 313 8 1 571 8 568 3.57e-149 442
MS.gene060530.t1 AT5G07130 45.902 488 240 9 100 571 5 484 1.33e-147 434
MS.gene060530.t1 AT5G07130 45.902 488 240 9 100 571 5 484 1.33e-147 434
MS.gene060530.t1 AT5G01040 39.415 581 320 8 1 571 8 566 4.78e-144 429
MS.gene060530.t1 AT3G09220 42.765 463 241 9 106 554 1 453 1.12e-125 377
MS.gene060530.t1 AT4G39830 30.551 599 337 19 6 562 10 571 2.68e-70 237
MS.gene060530.t1 AT5G21100 31.194 561 314 19 25 550 19 542 2.26e-66 226
MS.gene060530.t1 AT5G21105 31.142 578 334 20 4 549 13 558 2.99e-66 226
MS.gene060530.t1 AT5G21105 30.660 561 325 21 4 532 13 541 2.75e-56 198
MS.gene060530.t1 AT4G39830 30.279 502 278 16 100 562 6 474 1.58e-52 187
MS.gene060530.t1 AT4G39830 30.279 502 278 16 100 562 8 476 1.96e-52 186
MS.gene060530.t1 AT4G25240 28.807 545 345 14 36 567 31 545 1.08e-48 178
MS.gene060530.t1 AT4G25240 28.807 545 345 14 36 567 31 545 1.08e-48 178
MS.gene060530.t1 AT5G48450 28.388 546 335 18 16 546 10 514 5.05e-48 176
MS.gene060530.t1 AT5G48450 28.388 546 335 18 16 546 10 514 1.02e-47 176
MS.gene060530.t1 AT4G39830 29.142 501 272 15 100 562 8 463 1.65e-47 173
MS.gene060530.t1 AT5G51480 28.058 556 345 17 36 571 30 550 2.00e-47 175
MS.gene060530.t1 AT4G12420 27.307 531 343 16 35 552 26 526 1.94e-46 172
MS.gene060530.t1 AT4G12420 27.307 531 343 16 35 552 26 526 1.94e-46 172
MS.gene060530.t1 AT1G75790 26.909 550 332 19 36 566 29 527 4.59e-43 162
MS.gene060530.t1 AT1G21850 27.083 528 337 16 23 544 18 503 2.41e-40 154
MS.gene060530.t1 AT5G66920 24.542 546 371 12 29 571 31 538 8.50e-40 153
MS.gene060530.t1 AT1G21860 25.191 524 330 11 34 544 29 503 9.87e-40 152
MS.gene060530.t1 AT5G21105 32.647 340 197 12 219 549 51 367 1.10e-38 147
MS.gene060530.t1 AT4G28090 24.542 546 360 17 29 567 23 523 9.50e-36 141
MS.gene060530.t1 AT4G22010 26.296 540 330 23 16 536 5 495 1.26e-34 138
MS.gene060530.t1 AT4G38420 24.950 501 342 13 34 531 30 499 7.19e-34 135
MS.gene060530.t1 AT1G76160 23.735 514 351 12 34 544 28 503 3.18e-33 134
MS.gene060530.t1 AT2G23630 25.741 540 360 14 35 571 31 532 1.89e-32 131
MS.gene060530.t1 AT2G23630 25.494 557 340 15 35 571 36 537 1.93e-32 131
MS.gene060530.t1 AT1G41830 23.689 515 350 14 34 544 29 504 6.09e-32 130
MS.gene060530.t1 AT4G37160 24.675 539 368 13 35 571 32 534 6.32e-32 130
MS.gene060530.t1 AT1G55570 25.992 504 299 16 52 531 47 500 1.45e-30 126
MS.gene060530.t1 AT4G38420 24.435 487 330 14 34 515 30 483 6.42e-30 124
MS.gene060530.t1 AT1G55560 25.048 519 328 18 30 531 22 496 6.54e-30 124
MS.gene060530.t1 AT3G13390 25.502 498 323 16 45 531 39 499 3.16e-29 122
MS.gene060530.t1 AT4G38420 23.859 482 327 14 10 487 9 454 5.44e-29 120
MS.gene060530.t1 AT3G13400 24.105 531 347 19 14 531 10 497 1.18e-27 117
MS.gene060530.t1 AT3G13400 24.105 531 347 19 14 531 10 497 1.18e-27 117
MS.gene060530.t1 AT4G37160 27.397 292 195 7 35 325 32 307 3.19e-22 100

Find 153 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGGGTACCTTTCCCATTTA+AGG 0.142601 8.1:+75019273 MS.gene060530:CDS
GTGTCATATGGAATGTTATT+AGG 0.191294 8.1:-75020683 None:intergenic
TCTTGATAAGGAGCCTTAAA+TGG 0.196962 8.1:-75019286 None:intergenic
AACATTGAAAGGTGTCTTAT+TGG 0.207388 8.1:-75018960 None:intergenic
AAGTTCTACGACTTCGTTAA+TGG 0.217996 8.1:+75020656 MS.gene060530:CDS
TTTGGCATGCTCATGTTTCT+TGG 0.221846 8.1:+75019206 MS.gene060530:CDS
ATTCACCACTGTAAAGTTAT+AGG 0.222232 8.1:-75019167 None:intergenic
ACTCCAATTGTATTCATATA+TGG 0.236387 8.1:-75020896 None:intergenic
AACTGTCAAGCCATGAATAA+TGG 0.250740 8.1:+75020515 MS.gene060530:CDS
GGGAAAGGTACCCTATTCTT+TGG 0.277356 8.1:-75019265 None:intergenic
TTGTTACCTTGTTTATACTA+TGG 0.282371 8.1:+75018613 MS.gene060530:CDS
GCTTATTATAAGAAAATAAA+TGG 0.283522 8.1:+75020599 MS.gene060530:CDS
ACTAACTGCACAATTCAATT+TGG 0.283999 8.1:+75020865 MS.gene060530:CDS
TTATTTGAGCAGTTGTAGTT+AGG 0.302065 8.1:-75019529 None:intergenic
TGTCATATGGAATGTTATTA+GGG 0.310467 8.1:-75020682 None:intergenic
AACTACAACTGCTCAAATAA+TGG 0.313353 8.1:+75019532 MS.gene060530:CDS
ATCAAAAGGGCACTTTCTTT+TGG 0.315039 8.1:+75019188 MS.gene060530:CDS
GGATTATGACAGGGGAATAT+TGG 0.318844 8.1:+75019413 MS.gene060530:intron
TAGCCTACTTCAATTATATA+GGG 0.322498 8.1:+75020306 MS.gene060530:CDS
ACTGTCAAGCCATGAATAAT+GGG 0.326976 8.1:+75020516 MS.gene060530:CDS
AGCTTCTAGGATTGAAATAT+AGG 0.340995 8.1:-75020579 None:intergenic
AGAACTAAGGTCCTTGAATA+TGG 0.349233 8.1:+75020725 MS.gene060530:CDS
ATAGCCTACTTCAATTATAT+AGG 0.351392 8.1:+75020305 MS.gene060530:CDS
AAACTCTGGCCTGCTTGAAT+TGG 0.352309 8.1:-75019142 None:intergenic
AGACAGTCATGGATGGATTA+AGG 0.352838 8.1:+75020393 MS.gene060530:CDS
TGGCTGAGAGGAACGGTTCA+TGG 0.360623 8.1:+75019226 MS.gene060530:CDS
GTACCAACTTAACGTGATTC+CGG 0.363195 8.1:+75020028 MS.gene060530:CDS
TGTCAGAACCCCATTATTCA+TGG 0.367775 8.1:-75020525 None:intergenic
AAATTGAATTGTGCAGTTAG+TGG 0.377880 8.1:-75020863 None:intergenic
AGGGCCTGGATGACTGTTAA+TGG 0.379057 8.1:-75019509 None:intergenic
AATTGGACATTGTGTAATAA+AGG 0.383075 8.1:-75019125 None:intergenic
ATAATTATTTGCTCTTGATA+AGG 0.389280 8.1:-75019298 None:intergenic
CTCCAATTGTATTCATATAT+GGG 0.391433 8.1:-75020895 None:intergenic
GCCAGCTTATCATCAGGTTT+AGG 0.392466 8.1:-75020365 None:intergenic
CTTAACAAGTAGGTCCTTCC+CGG 0.393276 8.1:-75020047 None:intergenic
TATGAATACAATTGGAGTTC+CGG 0.398110 8.1:+75020901 MS.gene060530:CDS
TGATTGTTTATCCAAAGAAT+AGG 0.399902 8.1:+75019254 MS.gene060530:CDS
CCTTAACATGATGGCAGATC+TGG 0.409750 8.1:-75021281 None:intergenic
TTCAATGACTCCGTGTCATA+TGG 0.413446 8.1:-75020695 None:intergenic
GATTGTTTATCCAAAGAATA+GGG 0.418861 8.1:+75019255 MS.gene060530:CDS
TAGAACTTAGAGGGTGCATC+GGG 0.424101 8.1:-75020641 None:intergenic
GAAGAATGGAAAAGGAGAAC+TGG 0.425055 8.1:+75021238 MS.gene060530:CDS
ACATTGATATACACCAATCA+TGG 0.428766 8.1:+75021192 MS.gene060530:CDS
AACGAAGTCGTAGAACTTAG+AGG 0.434172 8.1:-75020651 None:intergenic
CCAGATCTGCCATCATGTTA+AGG 0.436349 8.1:+75021281 MS.gene060530:CDS
CTGTAGCCATGGATGTGAAT+TGG 0.439868 8.1:-75020803 None:intergenic
AACTGCACAATTCAATTTGG+TGG 0.440435 8.1:+75020868 MS.gene060530:CDS
CTTTACAGTGGTGAATCAAA+AGG 0.446706 8.1:+75019174 MS.gene060530:CDS
GCTTCTAGGATTGAAATATA+GGG 0.448642 8.1:-75020578 None:intergenic
TATTTGAGCAGTTGTAGTTA+GGG 0.448988 8.1:-75019528 None:intergenic
TACCAACTTAACGTGATTCC+GGG 0.449429 8.1:+75020029 MS.gene060530:CDS
ACAATCCTGCCAGACTTGTA+AGG 0.451834 8.1:-75020260 None:intergenic
AAAGACATTGTCACAGTCAA+TGG 0.458479 8.1:+75018878 MS.gene060530:CDS
CGGCTATCATGCTGGTATGA+TGG 0.460038 8.1:+75019097 MS.gene060530:CDS
TTGGAGTTCCGGTCGGTGGA+TGG 0.462730 8.1:+75020912 MS.gene060530:CDS
TTAACAGCCAGCTTATCATC+AGG 0.463496 8.1:-75020371 None:intergenic
ATTGAATGGAACTAGAACTA+AGG 0.468333 8.1:+75020712 MS.gene060530:CDS
CAAGAGCAAATAATTATACT+AGG 0.472623 8.1:+75019304 MS.gene060530:CDS
TCTTCTTGCGCGTAAACAAC+AGG 0.474363 8.1:-75018914 None:intergenic
ACCTAAACCTGATGATAAGC+TGG 0.474955 8.1:+75020364 MS.gene060530:CDS
TGCGCGTAAACAACAGGTCC+TGG 0.474976 8.1:-75018908 None:intergenic
CTTTCAATGTTACAATTCAC+TGG 0.476945 8.1:+75018972 MS.gene060530:CDS
GCTGTTGCACCTTACAAGTC+TGG 0.478773 8.1:+75020251 MS.gene060530:CDS
CTTGATAAGGAGCCTTAAAT+GGG 0.480376 8.1:-75019285 None:intergenic
GAGCAGTTGTAGTTAGGGCC+TGG 0.483325 8.1:-75019523 None:intergenic
TTTATAGTGAAGAATGGAAA+AGG 0.484441 8.1:+75021230 MS.gene060530:CDS
TGTAGCCATGGATGTGAATT+GGG 0.485014 8.1:-75020802 None:intergenic
ATGGTATTTATAGTGAAGAA+TGG 0.486058 8.1:+75021224 MS.gene060530:CDS
CTGGTCGATCAGCTGAAACT+AGG 0.488914 8.1:-75020211 None:intergenic
CCATTCCTAGTCCCCATGAT+TGG 0.490748 8.1:-75021205 None:intergenic
ATTCTTTGGATAAACAATCA+TGG 0.494706 8.1:-75019251 None:intergenic
TATGACACGGAGTCATTGAA+TGG 0.494839 8.1:+75020698 MS.gene060530:CDS
ATTTATTAGTCTTAACAAGT+AGG 0.500396 8.1:-75020057 None:intergenic
TCAGGTTTAGGTAATTTAGC+TGG 0.504745 8.1:-75020353 None:intergenic
CAGTGAATTGTAACATTGAA+AGG 0.505375 8.1:-75018971 None:intergenic
TACGTTGTCGGATATGGCAC+AGG 0.505791 8.1:+75020830 MS.gene060530:CDS
TGGAGTTCCGGTCGGTGGAT+GGG 0.506523 8.1:+75020913 MS.gene060530:CDS
ATCACTGTGTCTGTCGTGAA+TGG 0.510117 8.1:-75020161 None:intergenic
TTTACAGTGGTGAATCAAAA+GGG 0.516141 8.1:+75019175 MS.gene060530:CDS
TATAAACAAGGTAACAAAGT+TGG 0.520156 8.1:-75018607 None:intergenic
TATATAATTGAAGTAGGCTA+TGG 0.522248 8.1:-75020303 None:intergenic
AACTTATGGCACATGGTGCA+AGG 0.522324 8.1:+75018667 MS.gene060530:CDS
TTGTTAAGACTAATAAATGC+AGG 0.524233 8.1:+75020062 MS.gene060530:CDS
ACGACAGACACAGTGATGCT+TGG 0.527387 8.1:+75020167 MS.gene060530:CDS
TGTTTCTTGGCTGAGAGGAA+CGG 0.529635 8.1:+75019219 MS.gene060530:CDS
GACAGGGGAATATTGGCTGC+AGG 0.531339 8.1:+75019420 MS.gene060530:intron
TTAATGGTATATGCATCTGC+TGG 0.533299 8.1:-75019493 None:intergenic
AGGTCCTTGAATATGGTACC+AGG 0.534835 8.1:+75020732 MS.gene060530:CDS
TCCAATTGTATTCATATATG+GGG 0.536273 8.1:-75020894 None:intergenic
TTGCACCTTACAAGTCTGGC+AGG 0.539924 8.1:+75020255 MS.gene060530:CDS
TTCCCGGAATCACGTTAAGT+TGG 0.539938 8.1:-75020031 None:intergenic
GAGCATGCCACTCTAGTGAA+TGG 0.540227 8.1:+75019457 MS.gene060530:CDS
CCAATCATGGGGACTAGGAA+TGG 0.541532 8.1:+75021205 MS.gene060530:CDS
ACAGTCAATGGTATGTATCC+AGG 0.543289 8.1:+75018890 MS.gene060530:CDS
TCCGGCAGCGGCTATCATGC+TGG 0.545473 8.1:+75019089 MS.gene060530:CDS
TAACATGATGGCAGATCTGG+TGG 0.545956 8.1:-75021278 None:intergenic
ACATGATGGCAGATCTGGTG+GGG 0.548065 8.1:-75021276 None:intergenic
CATTGATATACACCAATCAT+GGG 0.549375 8.1:+75021193 MS.gene060530:CDS
GCACCCTGGTACCATATTCA+AGG 0.552988 8.1:-75020736 None:intergenic
TATACCATTAACAGTCATCC+AGG 0.553014 8.1:+75019505 MS.gene060530:CDS
ACTTATGGCACATGGTGCAA+GGG 0.559084 8.1:+75018668 MS.gene060530:CDS
TAAAGTTATAGGTGAAACTC+TGG 0.559122 8.1:-75019156 None:intergenic
TTAGGCATGGTATCCGGCAG+CGG 0.562296 8.1:+75019077 MS.gene060530:intron
ACAGCTGCCCATCCACCGAC+CGG 0.565254 8.1:-75020920 None:intergenic
GTATATGCATCTGCTGGAGG+TGG 0.568362 8.1:-75019487 None:intergenic
ACCAGCATGATAGCCGCTGC+CGG 0.569605 8.1:-75019090 None:intergenic
TGTTAAGCTGTGATTAGCAA+TGG 0.570639 8.1:-75020108 None:intergenic
TTTGTTTGGGTGTCTTCGAG+TGG 0.572380 8.1:-75020493 None:intergenic
CTTGTAAGGTGCAACAGCCA+TGG 0.573214 8.1:-75020246 None:intergenic
CAACGTAAAAGCTGTAGCCA+TGG 0.575280 8.1:-75020814 None:intergenic
GTCGGTAGTCCTTAACATGA+TGG 0.577159 8.1:-75021290 None:intergenic
GCTCATGTTTCTTGGCTGAG+AGG 0.578994 8.1:+75019214 MS.gene060530:CDS
GGACATTGTGTAATAAAGGA+TGG 0.579344 8.1:-75019121 None:intergenic
ATACACCAATCATGGGGACT+AGG 0.580579 8.1:+75021200 MS.gene060530:CDS
GACACAGTGATGCTTGGACC+AGG 0.583332 8.1:+75020173 MS.gene060530:CDS
GCTGTTAAGACAGTCATGGA+TGG 0.584431 8.1:+75020386 MS.gene060530:CDS
AATCACCCAATTCACATCCA+TGG 0.590062 8.1:+75020797 MS.gene060530:CDS
GTAGAACTTAGAGGGTGCAT+CGG 0.590381 8.1:-75020642 None:intergenic
ACAATTGGAGTTCCGGTCGG+TGG 0.593840 8.1:+75020908 MS.gene060530:CDS
AACATGATGGCAGATCTGGT+GGG 0.594938 8.1:-75021277 None:intergenic
TAAGGAGCCTTAAATGGGAA+AGG 0.596691 8.1:-75019280 None:intergenic
CTTATGGCACATGGTGCAAG+GGG 0.596985 8.1:+75018669 MS.gene060530:CDS
TTAACAATCGTGGAAGCTGA+TGG 0.598033 8.1:+75020125 MS.gene060530:CDS
ACACAATGTCCAATTCAAGC+AGG 0.599564 8.1:+75019133 MS.gene060530:CDS
GTTTCAGCTGATCGACCAGT+AGG 0.599812 8.1:+75020215 MS.gene060530:CDS
AGCTCCTCCATTCACTAGAG+TGG 0.606885 8.1:-75019464 None:intergenic
ACCAGTAGGAAAATATTCCA+TGG 0.612836 8.1:+75020229 MS.gene060530:CDS
TGCCCCTATATAATTGAAGT+AGG 0.615587 8.1:-75020309 None:intergenic
AGATGACAGAATCGTAGTCA+AGG 0.618005 8.1:+75018934 MS.gene060530:CDS
AGCCTACTTCAATTATATAG+GGG 0.623554 8.1:+75020307 MS.gene060530:CDS
ACGAAGTCGTAGAACTTAGA+GGG 0.623619 8.1:-75020650 None:intergenic
GCTGGCTGTTAAGACAGTCA+TGG 0.632833 8.1:+75020382 MS.gene060530:CDS
CATGATGGCAGATCTGGTGG+GGG 0.639539 8.1:-75021275 None:intergenic
AGGACATTCAGTGTTTGACC+TGG 0.640728 8.1:-75020191 None:intergenic
AACTTAACGTGATTCCGGGA+AGG 0.644475 8.1:+75020033 MS.gene060530:CDS
CTGTCAAGCCATGAATAATG+GGG 0.645622 8.1:+75020517 MS.gene060530:CDS
TATGTCAAACTTATGGCACA+TGG 0.655710 8.1:+75018660 MS.gene060530:CDS
CCAATTGTATTCATATATGG+GGG 0.658094 8.1:-75020893 None:intergenic
TAATCACAGCTTAACAATCG+TGG 0.664550 8.1:+75020115 MS.gene060530:CDS
ATGGTATATGCATCTGCTGG+AGG 0.664774 8.1:-75019490 None:intergenic
GTCATATGGAATGTTATTAG+GGG 0.668087 8.1:-75020681 None:intergenic
TTTCACCTATAACTTTACAG+TGG 0.669501 8.1:+75019162 MS.gene060530:CDS
AATACAATTGGAGTTCCGGT+CGG 0.670994 8.1:+75020905 MS.gene060530:CDS
CATGCCACTCTAGTGAATGG+AGG 0.673164 8.1:+75019460 MS.gene060530:CDS
GGTCCTTGAATATGGTACCA+GGG 0.679440 8.1:+75020733 MS.gene060530:CDS
ACTCAACCATAGTATAAACA+AGG 0.684052 8.1:-75018619 None:intergenic
CTGCAAAATGAGTTGCACCC+TGG 0.684133 8.1:-75020750 None:intergenic
TAATAACATTCCATATGACA+CGG 0.686240 8.1:+75020685 MS.gene060530:CDS
GTGCAAGGGGAGAATCAACA+AGG 0.699031 8.1:+75018682 MS.gene060530:CDS
ATTGATATACACCAATCATG+GGG 0.703520 8.1:+75021194 MS.gene060530:CDS
AATAAATGCAGGTTTAAACA+CGG 0.710080 8.1:+75020073 MS.gene060530:CDS
ATGATTGGTGTATATCAATG+TGG 0.739350 8.1:-75021190 None:intergenic
AGAACTTAGAGGGTGCATCG+GGG 0.784339 8.1:-75020640 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATATTTCTATTTATTTG+TGG + chr8.1:75018760-75018779 MS.gene060530:intron 10.0%
!!! CTATTTTTTAAAATTATTAC+TGG + chr8.1:75019717-75019736 MS.gene060530:intron 10.0%
!! GCTTATTATAAGAAAATAAA+TGG + chr8.1:75020599-75020618 MS.gene060530:CDS 15.0%
!! TTAAGTTACATCAAATAATT+TGG + chr8.1:75019852-75019871 MS.gene060530:intron 15.0%
!!! AAAATACTGATTTCATTTAA+TGG + chr8.1:75019595-75019614 MS.gene060530:intron 15.0%
!!! AAATACTGATTTCATTTAAT+GGG + chr8.1:75019596-75019615 MS.gene060530:intron 15.0%
!!! TTATTTCTTTTTTTTCTCTA+TGG + chr8.1:75021100-75021119 MS.gene060530:intron 15.0%
!! AAAAATATATTCATCACCAT+TGG + chr8.1:75020452-75020471 MS.gene060530:CDS 20.0%
!! AATTATACTAGGTAAGTTAA+AGG + chr8.1:75019315-75019334 MS.gene060530:intron 20.0%
!! ATAATTATTTGCTCTTGATA+AGG - chr8.1:75019301-75019320 None:intergenic 20.0%
!!! AAACTTGATTTTCGAATTTT+AGG + chr8.1:75019059-75019078 MS.gene060530:intron 20.0%
!!! AATACTGATTTCATTTAATG+GGG + chr8.1:75019597-75019616 MS.gene060530:intron 20.0%
!!! ATTTATTAGTCTTAACAAGT+AGG - chr8.1:75020060-75020079 None:intergenic 20.0%
!!! CTTTTAAAACAAATGTTAGT+GGG - chr8.1:75021067-75021086 None:intergenic 20.0%
!!! TATTTTACTGAAACATTTCA+GGG + chr8.1:75020996-75021015 MS.gene060530:intron 20.0%
!!! TATTTTTTCTACAAATGTGA+AGG - chr8.1:75018746-75018765 None:intergenic 20.0%
!!! TCTTTTAAAACAAATGTTAG+TGG - chr8.1:75021068-75021087 None:intergenic 20.0%
!!! TTTTAACTATGTCAAACTTA+TGG + chr8.1:75018653-75018672 MS.gene060530:CDS 20.0%
!!! TTTTCTTATAATAAGCTTCT+AGG - chr8.1:75020595-75020614 None:intergenic 20.0%
! AATAAATGCAGGTTTAAACA+CGG + chr8.1:75020073-75020092 MS.gene060530:CDS 25.0%
! AATTGGACATTGTGTAATAA+AGG - chr8.1:75019128-75019147 None:intergenic 25.0%
! ACTCCAATTGTATTCATATA+TGG - chr8.1:75020899-75020918 None:intergenic 25.0%
! ATAGCCTACTTCAATTATAT+AGG + chr8.1:75020305-75020324 MS.gene060530:CDS 25.0%
! ATCAAATAATTTGGCTAACA+TGG + chr8.1:75019861-75019880 MS.gene060530:intron 25.0%
! ATGGTATTTATAGTGAAGAA+TGG + chr8.1:75021224-75021243 MS.gene060530:CDS 25.0%
! ATTCTTTGGATAAACAATCA+TGG - chr8.1:75019254-75019273 None:intergenic 25.0%
! CAAGAGCAAATAATTATACT+AGG + chr8.1:75019304-75019323 MS.gene060530:CDS 25.0%
! CTCCAATTGTATTCATATAT+GGG - chr8.1:75020898-75020917 None:intergenic 25.0%
! GATTGTTTATCCAAAGAATA+GGG + chr8.1:75019255-75019274 MS.gene060530:CDS 25.0%
! TAATAACATTCCATATGACA+CGG + chr8.1:75020685-75020704 MS.gene060530:CDS 25.0%
! TAGCCTACTTCAATTATATA+GGG + chr8.1:75020306-75020325 MS.gene060530:CDS 25.0%
! TATAAACAAGGTAACAAAGT+TGG - chr8.1:75018610-75018629 None:intergenic 25.0%
! TATATAATTGAAGTAGGCTA+TGG - chr8.1:75020306-75020325 None:intergenic 25.0%
! TCCAATTGTATTCATATATG+GGG - chr8.1:75020897-75020916 None:intergenic 25.0%
! TGATTGTTTATCCAAAGAAT+AGG + chr8.1:75019254-75019273 MS.gene060530:CDS 25.0%
! TGTCATATGGAATGTTATTA+GGG - chr8.1:75020685-75020704 None:intergenic 25.0%
! TTGTTAAGACTAATAAATGC+AGG + chr8.1:75020062-75020081 MS.gene060530:CDS 25.0%
! TTTATAGTGAAGAATGGAAA+AGG + chr8.1:75021230-75021249 MS.gene060530:CDS 25.0%
!! AACAAGGTTCTATGATTTTA+AGG + chr8.1:75018698-75018717 MS.gene060530:CDS 25.0%
!! CATAGGTTGTATACAATTTT+AGG - chr8.1:75019627-75019646 None:intergenic 25.0%
!! CTATTTTACTGAAACATTTC+AGG + chr8.1:75020995-75021014 MS.gene060530:intron 25.0%
!! CTTTTTAACATTCAATCCAA+TGG - chr8.1:75020471-75020490 None:intergenic 25.0%
!! TTGTTACCTTGTTTATACTA+TGG + chr8.1:75018613-75018632 MS.gene060530:CDS 25.0%
!!! ACTATTTTTGATGTGCTTAA+TGG + chr8.1:75018808-75018827 MS.gene060530:intron 25.0%
!!! ATACTGATTTCATTTAATGG+GGG + chr8.1:75019598-75019617 MS.gene060530:intron 25.0%
!!! TTTTTTTTCTCTATGGCTAA+AGG + chr8.1:75021107-75021126 MS.gene060530:intron 25.0%
AAACACTGAATTCAAACCAA+AGG - chr8.1:75019346-75019365 None:intergenic 30.0%
AAATTGAATTGTGCAGTTAG+TGG - chr8.1:75020866-75020885 None:intergenic 30.0%
AACTACAACTGCTCAAATAA+TGG + chr8.1:75019532-75019551 MS.gene060530:CDS 30.0%
AATGAACTGCATTATGTATG+CGG - chr8.1:75019013-75019032 None:intergenic 30.0%
ACATTGATATACACCAATCA+TGG + chr8.1:75021192-75021211 MS.gene060530:CDS 30.0%
ACCTGCAAAAAGTTATGTTA+CGG - chr8.1:75021153-75021172 None:intergenic 30.0%
ACTAACTGCACAATTCAATT+TGG + chr8.1:75020865-75020884 MS.gene060530:CDS 30.0%
ACTCAACCATAGTATAAACA+AGG - chr8.1:75018622-75018641 None:intergenic 30.0%
AGCCTACTTCAATTATATAG+GGG + chr8.1:75020307-75020326 MS.gene060530:CDS 30.0%
ATGATTGGTGTATATCAATG+TGG - chr8.1:75021193-75021212 None:intergenic 30.0%
ATTCACCACTGTAAAGTTAT+AGG - chr8.1:75019170-75019189 None:intergenic 30.0%
ATTGAATGGAACTAGAACTA+AGG + chr8.1:75020712-75020731 MS.gene060530:CDS 30.0%
ATTGATATACACCAATCATG+GGG + chr8.1:75021194-75021213 MS.gene060530:CDS 30.0%
CAGTGAATTGTAACATTGAA+AGG - chr8.1:75018974-75018993 None:intergenic 30.0%
CATTGATATACACCAATCAT+GGG + chr8.1:75021193-75021212 MS.gene060530:CDS 30.0%
CCAATTGTATTCATATATGG+GGG - chr8.1:75020896-75020915 None:intergenic 30.0%
CTTTCAATGTTACAATTCAC+TGG + chr8.1:75018972-75018991 MS.gene060530:CDS 30.0%
GTCATATGGAATGTTATTAG+GGG - chr8.1:75020684-75020703 None:intergenic 30.0%
GTGTCATATGGAATGTTATT+AGG - chr8.1:75020686-75020705 None:intergenic 30.0%
TAAAGTTATAGGTGAAACTC+TGG - chr8.1:75019159-75019178 None:intergenic 30.0%
TAGTCTCATGGATATTGTTA+TGG - chr8.1:75019926-75019945 None:intergenic 30.0%
TATACATTGAGATGTATACC+TGG - chr8.1:75020965-75020984 None:intergenic 30.0%
TATACTAGGTAAGTTAAAGG+TGG + chr8.1:75019318-75019337 MS.gene060530:intron 30.0%
TATGAATACAATTGGAGTTC+CGG + chr8.1:75020901-75020920 MS.gene060530:CDS 30.0%
TATTTGAGCAGTTGTAGTTA+GGG - chr8.1:75019531-75019550 None:intergenic 30.0%
TTATTTGAGCAGTTGTAGTT+AGG - chr8.1:75019532-75019551 None:intergenic 30.0%
TTTACAGTGGTGAATCAAAA+GGG + chr8.1:75019175-75019194 MS.gene060530:CDS 30.0%
TTTCACCTATAACTTTACAG+TGG + chr8.1:75019162-75019181 MS.gene060530:CDS 30.0%
! TACACATCTGAAAAGTTGAT+AGG - chr8.1:75020011-75020030 None:intergenic 30.0%
! TGATTTTCGAATTTTAGGCA+TGG + chr8.1:75019064-75019083 MS.gene060530:intron 30.0%
! TTCAATATGAAGTGTCAATG+TGG - chr8.1:75019650-75019669 None:intergenic 30.0%
!! AACATTGAAAGGTGTCTTAT+TGG - chr8.1:75018963-75018982 None:intergenic 30.0%
!! AGCTTCTAGGATTGAAATAT+AGG - chr8.1:75020582-75020601 None:intergenic 30.0%
!! ATGTTAGTGGGTAATTTGTT+AGG - chr8.1:75021055-75021074 None:intergenic 30.0%
!! GCTTCTAGGATTGAAATATA+GGG - chr8.1:75020581-75020600 None:intergenic 30.0%
!! TGTTAGTGGGTAATTTGTTA+GGG - chr8.1:75021054-75021073 None:intergenic 30.0%
AAAGACATTGTCACAGTCAA+TGG + chr8.1:75018878-75018897 MS.gene060530:CDS 35.0%
AACTGCACAATTCAATTTGG+TGG + chr8.1:75020868-75020887 MS.gene060530:CDS 35.0%
AACTGTCAAGCCATGAATAA+TGG + chr8.1:75020515-75020534 MS.gene060530:CDS 35.0%
AAGTTCTACGACTTCGTTAA+TGG + chr8.1:75020656-75020675 MS.gene060530:CDS 35.0%
ACCAGTAGGAAAATATTCCA+TGG + chr8.1:75020229-75020248 MS.gene060530:CDS 35.0%
ACTGTCAAGCCATGAATAAT+GGG + chr8.1:75020516-75020535 MS.gene060530:CDS 35.0%
AGAACTAAGGTCCTTGAATA+TGG + chr8.1:75020725-75020744 MS.gene060530:CDS 35.0%
AGCTAATTCGGATTATGACA+GGG + chr8.1:75019404-75019423 MS.gene060530:intron 35.0%
CCCCCATATATGAATACAAT+TGG + chr8.1:75020893-75020912 MS.gene060530:CDS 35.0%
CTTGATAAGGAGCCTTAAAT+GGG - chr8.1:75019288-75019307 None:intergenic 35.0%
CTTTACAGTGGTGAATCAAA+AGG + chr8.1:75019174-75019193 MS.gene060530:CDS 35.0%
GGACATTGTGTAATAAAGGA+TGG - chr8.1:75019124-75019143 None:intergenic 35.0%
TAAGTTAAAGGTGGTTCCTT+TGG + chr8.1:75019327-75019346 MS.gene060530:intron 35.0%
TAATCACAGCTTAACAATCG+TGG + chr8.1:75020115-75020134 MS.gene060530:CDS 35.0%
TACAAATGTGAAGGTCAGAA+TGG - chr8.1:75018737-75018756 None:intergenic 35.0%
TATACCATTAACAGTCATCC+AGG + chr8.1:75019505-75019524 MS.gene060530:CDS 35.0%
TATGTCAAACTTATGGCACA+TGG + chr8.1:75018660-75018679 MS.gene060530:CDS 35.0%
TCAGGTTTAGGTAATTTAGC+TGG - chr8.1:75020356-75020375 None:intergenic 35.0%
TCTTGATAAGGAGCCTTAAA+TGG - chr8.1:75019289-75019308 None:intergenic 35.0%
TGCCCCTATATAATTGAAGT+AGG - chr8.1:75020312-75020331 None:intergenic 35.0%
TGTATCCATTGTGTTAGTGT+CGG - chr8.1:75019687-75019706 None:intergenic 35.0%
TGTTAAGCTGTGATTAGCAA+TGG - chr8.1:75020111-75020130 None:intergenic 35.0%
TTAATGGTATATGCATCTGC+TGG - chr8.1:75019496-75019515 None:intergenic 35.0%
! CTTCATATTGAAAGCATGTC+CGG + chr8.1:75019658-75019677 MS.gene060530:intron 35.0%
! TCCGTAACATAACTTTTTGC+AGG + chr8.1:75021149-75021168 MS.gene060530:intron 35.0%
!! GTTAGTGGGTAATTTGTTAG+GGG - chr8.1:75021053-75021072 None:intergenic 35.0%
!! TTAGTGGGTAATTTGTTAGG+GGG - chr8.1:75021052-75021071 None:intergenic 35.0%
!!! ATCAAAAGGGCACTTTCTTT+TGG + chr8.1:75019188-75019207 MS.gene060530:CDS 35.0%
!!! ATGGCTTGACAGTTTTGTTT+GGG - chr8.1:75020509-75020528 None:intergenic 35.0%
AACGAAGTCGTAGAACTTAG+AGG - chr8.1:75020654-75020673 None:intergenic 40.0%
AATACAATTGGAGTTCCGGT+CGG + chr8.1:75020905-75020924 MS.gene060530:CDS 40.0%
AATCACCCAATTCACATCCA+TGG + chr8.1:75020797-75020816 MS.gene060530:CDS 40.0%
AATTTGGCTAACATGGTGCA+TGG + chr8.1:75019868-75019887 MS.gene060530:intron 40.0%
ACACAATGTCCAATTCAAGC+AGG + chr8.1:75019133-75019152 MS.gene060530:CDS 40.0%
ACAGTCAATGGTATGTATCC+AGG + chr8.1:75018890-75018909 MS.gene060530:CDS 40.0%
ACCTAAACCTGATGATAAGC+TGG + chr8.1:75020364-75020383 MS.gene060530:CDS 40.0%
ACGAAGTCGTAGAACTTAGA+GGG - chr8.1:75020653-75020672 None:intergenic 40.0%
ACTGATGTTGCGAGCTAATT+CGG + chr8.1:75019392-75019411 MS.gene060530:intron 40.0%
AGATGACAGAATCGTAGTCA+AGG + chr8.1:75018934-75018953 MS.gene060530:CDS 40.0%
CTGTCAAGCCATGAATAATG+GGG + chr8.1:75020517-75020536 MS.gene060530:CDS 40.0%
GAAGAATGGAAAAGGAGAAC+TGG + chr8.1:75021238-75021257 MS.gene060530:CDS 40.0%
GAGCTAATTCGGATTATGAC+AGG + chr8.1:75019403-75019422 MS.gene060530:intron 40.0%
GCTAATTCGGATTATGACAG+GGG + chr8.1:75019405-75019424 MS.gene060530:intron 40.0%
GGATTATGACAGGGGAATAT+TGG + chr8.1:75019413-75019432 MS.gene060530:intron 40.0%
GTACCAACTTAACGTGATTC+CGG + chr8.1:75020028-75020047 MS.gene060530:CDS 40.0%
GTGCTTAATGGTTACTGTAC+AGG + chr8.1:75018820-75018839 MS.gene060530:intron 40.0%
TAAGGAGCCTTAAATGGGAA+AGG - chr8.1:75019283-75019302 None:intergenic 40.0%
TACCAACTTAACGTGATTCC+GGG + chr8.1:75020029-75020048 MS.gene060530:CDS 40.0%
TATGACACGGAGTCATTGAA+TGG + chr8.1:75020698-75020717 MS.gene060530:CDS 40.0%
TGTAGCCATGGATGTGAATT+GGG - chr8.1:75020805-75020824 None:intergenic 40.0%
TGTCAGAACCCCATTATTCA+TGG - chr8.1:75020528-75020547 None:intergenic 40.0%
TGTCTGTGTTAGTGCTTCAT+AGG + chr8.1:75019778-75019797 MS.gene060530:intron 40.0%
TTAACAATCGTGGAAGCTGA+TGG + chr8.1:75020125-75020144 MS.gene060530:CDS 40.0%
TTAACAGCCAGCTTATCATC+AGG - chr8.1:75020374-75020393 None:intergenic 40.0%
TTCAATGACTCCGTGTCATA+TGG - chr8.1:75020698-75020717 None:intergenic 40.0%
TTGTGAGTTACGTAGTCTCA+TGG - chr8.1:75019938-75019957 None:intergenic 40.0%
TTTGGCATGCTCATGTTTCT+TGG + chr8.1:75019206-75019225 MS.gene060530:CDS 40.0%
! AGCTTTTACGTTGTCGGATA+TGG + chr8.1:75020824-75020843 MS.gene060530:CDS 40.0%
! ATGAAGTGTCAATGTGGCAT+AGG - chr8.1:75019644-75019663 None:intergenic 40.0%
! CAACTCATTTTGCAGAACAC+AGG + chr8.1:75020758-75020777 MS.gene060530:CDS 40.0%
! CATAACTTTTTGCAGGTGTG+TGG + chr8.1:75021156-75021175 MS.gene060530:intron 40.0%
! CGAATTTTAGGCATGGTATC+CGG + chr8.1:75019071-75019090 MS.gene060530:intron 40.0%
! CGTTTTGTAGCTGATAATCC+AGG + chr8.1:75020944-75020963 MS.gene060530:CDS 40.0%
! GCCATGGAATATTTTCCTAC+TGG - chr8.1:75020233-75020252 None:intergenic 40.0%
! TAGGGTACCTTTCCCATTTA+AGG + chr8.1:75019273-75019292 MS.gene060530:CDS 40.0%
!! AGACAGTCATGGATGGATTA+AGG + chr8.1:75020393-75020412 MS.gene060530:CDS 40.0%
!!! CATGGCTTGACAGTTTTGTT+TGG - chr8.1:75020510-75020529 None:intergenic 40.0%
AAACTCTGGCCTGCTTGAAT+TGG - chr8.1:75019145-75019164 None:intergenic 45.0%
AACATGATGGCAGATCTGGT+GGG - chr8.1:75021280-75021299 None:intergenic 45.0%
AACTTAACGTGATTCCGGGA+AGG + chr8.1:75020033-75020052 MS.gene060530:CDS 45.0%
AACTTATGGCACATGGTGCA+AGG + chr8.1:75018667-75018686 MS.gene060530:CDS 45.0%
ACAATCCTGCCAGACTTGTA+AGG - chr8.1:75020263-75020282 None:intergenic 45.0%
ACTTATGGCACATGGTGCAA+GGG + chr8.1:75018668-75018687 MS.gene060530:CDS 45.0%
AGGACATTCAGTGTTTGACC+TGG - chr8.1:75020194-75020213 None:intergenic 45.0%
AGGTCCTTGAATATGGTACC+AGG + chr8.1:75020732-75020751 MS.gene060530:CDS 45.0%
ATACACCAATCATGGGGACT+AGG + chr8.1:75021200-75021219 MS.gene060530:CDS 45.0%
ATCACTGTGTCTGTCGTGAA+TGG - chr8.1:75020164-75020183 None:intergenic 45.0%
ATGGTATATGCATCTGCTGG+AGG - chr8.1:75019493-75019512 None:intergenic 45.0%
CAACGTAAAAGCTGTAGCCA+TGG - chr8.1:75020817-75020836 None:intergenic 45.0%
CTGTAGCCATGGATGTGAAT+TGG - chr8.1:75020806-75020825 None:intergenic 45.0%
CTTAACAAGTAGGTCCTTCC+CGG - chr8.1:75020050-75020069 None:intergenic 45.0%
GCCAGCTTATCATCAGGTTT+AGG - chr8.1:75020368-75020387 None:intergenic 45.0%
GCTGTTAAGACAGTCATGGA+TGG + chr8.1:75020386-75020405 MS.gene060530:CDS 45.0%
GGTCCTTGAATATGGTACCA+GGG + chr8.1:75020733-75020752 MS.gene060530:CDS 45.0%
TAACATGATGGCAGATCTGG+TGG - chr8.1:75021281-75021300 None:intergenic 45.0%
TCTTCTTGCGCGTAAACAAC+AGG - chr8.1:75018917-75018936 None:intergenic 45.0%
TGTTTCTTGGCTGAGAGGAA+CGG + chr8.1:75019219-75019238 MS.gene060530:CDS 45.0%
TTCCCGGAATCACGTTAAGT+TGG - chr8.1:75020034-75020053 None:intergenic 45.0%
TTTGTTTGGGTGTCTTCGAG+TGG - chr8.1:75020496-75020515 None:intergenic 45.0%
! GGCTACAGCTTTTACGTTGT+CGG + chr8.1:75020818-75020837 MS.gene060530:CDS 45.0%
! GTAGAACTTAGAGGGTGCAT+CGG - chr8.1:75020645-75020664 None:intergenic 45.0%
! TAGAACTTAGAGGGTGCATC+GGG - chr8.1:75020644-75020663 None:intergenic 45.0%
!! GGGAAAGGTACCCTATTCTT+TGG - chr8.1:75019268-75019287 None:intergenic 45.0%
!! TGGGTAATTTGTTAGGGGGA+GGG - chr8.1:75021048-75021067 None:intergenic 45.0%
ACATGATGGCAGATCTGGTG+GGG - chr8.1:75021279-75021298 None:intergenic 50.0%
ACGACAGACACAGTGATGCT+TGG + chr8.1:75020167-75020186 MS.gene060530:CDS 50.0%
AGCTCCTCCATTCACTAGAG+TGG - chr8.1:75019467-75019486 None:intergenic 50.0%
AGGGCCTGGATGACTGTTAA+TGG - chr8.1:75019512-75019531 None:intergenic 50.0%
CATGCCACTCTAGTGAATGG+AGG + chr8.1:75019460-75019479 MS.gene060530:CDS 50.0%
CCAATCATGGGGACTAGGAA+TGG + chr8.1:75021205-75021224 MS.gene060530:CDS 50.0%
CCATTCCTAGTCCCCATGAT+TGG - chr8.1:75021208-75021227 None:intergenic 50.0%
CGGCTATCATGCTGGTATGA+TGG + chr8.1:75019097-75019116 MS.gene060530:CDS 50.0%
CTGCAAAATGAGTTGCACCC+TGG - chr8.1:75020753-75020772 None:intergenic 50.0%
CTGGTCGATCAGCTGAAACT+AGG - chr8.1:75020214-75020233 None:intergenic 50.0%
CTTATGGCACATGGTGCAAG+GGG + chr8.1:75018669-75018688 MS.gene060530:CDS 50.0%
CTTGTAAGGTGCAACAGCCA+TGG - chr8.1:75020249-75020268 None:intergenic 50.0%
GAGCATGCCACTCTAGTGAA+TGG + chr8.1:75019457-75019476 MS.gene060530:CDS 50.0%
GCACCCTGGTACCATATTCA+AGG - chr8.1:75020739-75020758 None:intergenic 50.0%
GCTCATGTTTCTTGGCTGAG+AGG + chr8.1:75019214-75019233 MS.gene060530:CDS 50.0%
GCTGGCTGTTAAGACAGTCA+TGG + chr8.1:75020382-75020401 MS.gene060530:CDS 50.0%
GCTGTTGCACCTTACAAGTC+TGG + chr8.1:75020251-75020270 MS.gene060530:CDS 50.0%
GTATATGCATCTGCTGGAGG+TGG - chr8.1:75019490-75019509 None:intergenic 50.0%
GTGCAAGGGGAGAATCAACA+AGG + chr8.1:75018682-75018701 MS.gene060530:CDS 50.0%
GTTTCAGCTGATCGACCAGT+AGG + chr8.1:75020215-75020234 MS.gene060530:CDS 50.0%
TACGTTGTCGGATATGGCAC+AGG + chr8.1:75020830-75020849 MS.gene060530:CDS 50.0%
TTGCACCTTACAAGTCTGGC+AGG + chr8.1:75020255-75020274 MS.gene060530:CDS 50.0%
TTGGCTAACATGGTGCATGG+TGG + chr8.1:75019871-75019890 MS.gene060530:intron 50.0%
! AGAACTTAGAGGGTGCATCG+GGG - chr8.1:75020643-75020662 None:intergenic 50.0%
! ATTGTGTTAGTGTCGGACGC+CGG - chr8.1:75019680-75019699 None:intergenic 50.0%
!! GGGTAATTTGTTAGGGGGAG+GGG - chr8.1:75021047-75021066 None:intergenic 50.0%
!! GGTAATTTGTTAGGGGGAGG+GGG - chr8.1:75021046-75021065 None:intergenic 50.0%
!! GTAATTTGTTAGGGGGAGGG+GGG - chr8.1:75021045-75021064 None:intergenic 50.0%
!! GTGGGTAATTTGTTAGGGGG+AGG - chr8.1:75021049-75021068 None:intergenic 50.0%
ACAATTGGAGTTCCGGTCGG+TGG + chr8.1:75020908-75020927 MS.gene060530:CDS 55.0%
CATGATGGCAGATCTGGTGG+GGG - chr8.1:75021278-75021297 None:intergenic 55.0%
GACACAGTGATGCTTGGACC+AGG + chr8.1:75020173-75020192 MS.gene060530:CDS 55.0%
GAGCAGTTGTAGTTAGGGCC+TGG - chr8.1:75019526-75019545 None:intergenic 55.0%
GGCGTCCGACACTAACACAA+TGG + chr8.1:75019679-75019698 MS.gene060530:intron 55.0%
TGCGCGTAAACAACAGGTCC+TGG - chr8.1:75018911-75018930 None:intergenic 55.0%
TGGCTGAGAGGAACGGTTCA+TGG + chr8.1:75019226-75019245 MS.gene060530:CDS 55.0%
TTAGGCATGGTATCCGGCAG+CGG + chr8.1:75019077-75019096 MS.gene060530:intron 55.0%
! GACAGGGGAATATTGGCTGC+AGG + chr8.1:75019420-75019439 MS.gene060530:intron 55.0%
ACCAGCATGATAGCCGCTGC+CGG - chr8.1:75019093-75019112 None:intergenic 60.0%
TGGAGTTCCGGTCGGTGGAT+GGG + chr8.1:75020913-75020932 MS.gene060530:CDS 60.0%
TTGGAGTTCCGGTCGGTGGA+TGG + chr8.1:75020912-75020931 MS.gene060530:CDS 60.0%
ACAGCTGCCCATCCACCGAC+CGG - chr8.1:75020923-75020942 None:intergenic 65.0%
GGCAGATCTGGTGGGGGATG+TGG - chr8.1:75021272-75021291 None:intergenic 65.0%
TCCGGCAGCGGCTATCATGC+TGG + chr8.1:75019089-75019108 MS.gene060530:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 75018603 75021301 75018603 ID=MS.gene060530
chr8.1 mRNA 75018603 75021301 75018603 ID=MS.gene060530.t1;Parent=MS.gene060530
chr8.1 exon 75018603 75018719 75018603 ID=MS.gene060530.t1.exon1;Parent=MS.gene060530.t1
chr8.1 CDS 75018603 75018719 75018603 ID=cds.MS.gene060530.t1;Parent=MS.gene060530.t1
chr8.1 exon 75018842 75018993 75018842 ID=MS.gene060530.t1.exon2;Parent=MS.gene060530.t1
chr8.1 CDS 75018842 75018993 75018842 ID=cds.MS.gene060530.t1;Parent=MS.gene060530.t1
chr8.1 exon 75019081 75019325 75019081 ID=MS.gene060530.t1.exon3;Parent=MS.gene060530.t1
chr8.1 CDS 75019081 75019325 75019081 ID=cds.MS.gene060530.t1;Parent=MS.gene060530.t1
chr8.1 exon 75019425 75019553 75019425 ID=MS.gene060530.t1.exon4;Parent=MS.gene060530.t1
chr8.1 CDS 75019425 75019553 75019425 ID=cds.MS.gene060530.t1;Parent=MS.gene060530.t1
chr8.1 exon 75020024 75020965 75020024 ID=MS.gene060530.t1.exon5;Parent=MS.gene060530.t1
chr8.1 CDS 75020024 75020965 75020024 ID=cds.MS.gene060530.t1;Parent=MS.gene060530.t1
chr8.1 exon 75021171 75021301 75021171 ID=MS.gene060530.t1.exon6;Parent=MS.gene060530.t1
chr8.1 CDS 75021171 75021301 75021171 ID=cds.MS.gene060530.t1;Parent=MS.gene060530.t1
Gene Sequence

>MS.gene060530

ATGGCCAACTTTGTTACCTTGTTTATACTATGGTTGAGTGTTATATGTACTTTTAACTATGTCAAACTTATGGCACATGGTGCAAGGGGAGAATCAACAAGGTTCTATGATTTTAAGGTATTTTCTTTGTTCCATTCTGACCTTCACATTTGTAGAAAAAATATTTCTATTTATTTGTGGTTTTCAAAATTCAAAAGCAATATTAACTATTTTTGATGTGCTTAATGGTTACTGTACAGGTTCAAACTAAAAGAGTTGCAAAACTTTGCAACTCAAAAGACATTGTCACAGTCAATGGTATGTATCCAGGACCTGTTGTTTACGCGCAAGAAGATGACAGAATCGTAGTCAAGGTTACCAATAAGACACCTTTCAATGTTACAATTCACTGGTAATTTCAAGCAATACCGCATACATAATGCAGTTCATTTAATAAAAAATGATAATTTAACTAACAAACTTGATTTTCGAATTTTAGGCATGGTATCCGGCAGCGGCTATCATGCTGGTATGATGGACCATCCTTTATTACACAATGTCCAATTCAAGCAGGCCAGAGTTTCACCTATAACTTTACAGTGGTGAATCAAAAGGGCACTTTCTTTTGGCATGCTCATGTTTCTTGGCTGAGAGGAACGGTTCATGGAGCCATGATTGTTTATCCAAAGAATAGGGTACCTTTCCCATTTAAGGCTCCTTATCAAGAGCAAATAATTATACTAGGTAAGTTAAAGGTGGTTCCTTTGGTTTGAATTCAGTGTTTCAAGTTGTATGTTTTCTCTATACAACACTGATGTTGCGAGCTAATTCGGATTATGACAGGGGAATATTGGCTGCAGGATCTTCAACAAATTGAGCATGCCACTCTAGTGAATGGAGGAGCTCCACCTCCAGCAGATGCATATACCATTAACAGTCATCCAGGCCCTAACTACAACTGCTCAAATAATGGTATTTTTGAGATAAAAGAAGATAAATAATAAGTGATCGTGAAAATACTGATTTCATTTAATGGGGGTTTCCTAAAATTGTATACAACCTATGCCACATTGACACTTCATATTGAAAGCATGTCCGGCGTCCGACACTAACACAATGGATACACTCAATCATTCTATTTTTTAAAATTATTACTGGTCTCTACGTGTATGTGTCAATGTCGTTTTTGATGTTTGTGTCTGTGTTAGTGCTTCATAGGATACAACTAACAATGTCAGTGATTATTTTATAAAGTGATGTTTCAATCAGATTAAGTTACATCAAATAATTTGGCTAACATGGTGCATGGTGGTAATCTTTTTCACTAAGAATCTATTGACACCATAACAATATCCATGAGACTACGTAACTCACAACTTTGTAATTTAAATTTTCTATCTTCAGTTTTCACTGATATGTTTCATTTCCTATCAACTTTTCAGATGTGTACCAACTTAACGTGATTCCGGGAAGGACCTACTTGTTAAGACTAATAAATGCAGGTTTAAACACGGAGAACTTCTTTGCCATTGCTAATCACAGCTTAACAATCGTGGAAGCTGATGGTGAATACACGAAGCCATTCACGACAGACACAGTGATGCTTGGACCAGGTCAAACACTGAATGTCCTAGTTTCAGCTGATCGACCAGTAGGAAAATATTCCATGGCTGTTGCACCTTACAAGTCTGGCAGGATTGTCAAATATCAAAATGTTTCAGCCATAGCCTACTTCAATTATATAGGGGCAGAATCTAACAGTTCGTATTTACCAGCTAAATTACCTAAACCTGATGATAAGCTGGCTGTTAAGACAGTCATGGATGGATTAAGGAGCTTAAATCAAGTGAACGTTTTCAAAGAAATTGATAAAAATATATTCATCACCATTGGATTGAATGTTAAAAAGTGCCACTCGAAGACACCCAAACAAAACTGTCAAGCCATGAATAATGGGGTTCTGACAGCTTCAATGAACAATATAAGTTTCGTTCATCCCTATATTTCAATCCTAGAAGCTTATTATAAGAAAATAAATGGATCGTATACTGAAGATTTCCCCGATGCACCCTCTAAGTTCTACGACTTCGTTAATGGTGCCCCTAATAACATTCCATATGACACGGAGTCATTGAATGGAACTAGAACTAAGGTCCTTGAATATGGTACCAGGGTGCAACTCATTTTGCAGAACACAGGAACAGTCAACATTGAAAATCACCCAATTCACATCCATGGCTACAGCTTTTACGTTGTCGGATATGGCACAGGCAACTACAATCCACTAACTGCACAATTCAATTTGGTGGATCCCCCATATATGAATACAATTGGAGTTCCGGTCGGTGGATGGGCAGCTGTTCGTTTTGTAGCTGATAATCCAGGTATACATCTCAATGTATATTTCTTTTTTCTATTTTACTGAAACATTTCAGGGTTCGATCTCTGTTGCTAACAAATCCCCCCTCCCCCTAACAAATTACCCACTAACATTTGTTTTAAAAGATCAAGAAACTGTTTATTTCTTTTTTTTCTCTATGGCTAAAGGAATAATTCATTTTTTATAATCCGTAACATAACTTTTTGCAGGTGTGTGGTACATGCACTGCCACATTGATATACACCAATCATGGGGACTAGGAATGGTATTTATAGTGAAGAATGGAAAAGGAGAACTGGAGTCTTTACCACATCCCCCACCAGATCTGCCATCATGTTAA
Protein sequence

>MS.gene060530.t1

MANFVTLFILWLSVICTFNYVKLMAHGARGESTRFYDFKVQTKRVAKLCNSKDIVTVNGMYPGPVVYAQEDDRIVVKVTNKTPFNVTIHWHGIRQRLSCWYDGPSFITQCPIQAGQSFTYNFTVVNQKGTFFWHAHVSWLRGTVHGAMIVYPKNRVPFPFKAPYQEQIIILGEYWLQDLQQIEHATLVNGGAPPPADAYTINSHPGPNYNCSNNDVYQLNVIPGRTYLLRLINAGLNTENFFAIANHSLTIVEADGEYTKPFTTDTVMLGPGQTLNVLVSADRPVGKYSMAVAPYKSGRIVKYQNVSAIAYFNYIGAESNSSYLPAKLPKPDDKLAVKTVMDGLRSLNQVNVFKEIDKNIFITIGLNVKKCHSKTPKQNCQAMNNGVLTASMNNISFVHPYISILEAYYKKINGSYTEDFPDAPSKFYDFVNGAPNNIPYDTESLNGTRTKVLEYGTRVQLILQNTGTVNIENHPIHIHGYSFYVVGYGTGNYNPLTAQFNLVDPPYMNTIGVPVGGWAAVRFVADNPGVWYMHCHIDIHQSWGLGMVFIVKNGKGELESLPHPPPDLPSC