AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049742

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049742.t1 MTR_4g056470 91.429 1015 53 3 1 988 1 1008 0.0 1862
MS.gene049742.t1 MTR_4g056430 79.536 992 178 9 1 988 1 971 0.0 1568
MS.gene049742.t1 MTR_6g477980 55.216 949 372 16 83 988 171 1109 0.0 994
MS.gene049742.t1 MTR_6g477980 55.216 949 372 16 83 988 177 1115 0.0 994
MS.gene049742.t1 MTR_1g041345 55.090 884 367 13 124 988 107 979 0.0 957
MS.gene049742.t1 MTR_1g102630 52.096 954 421 13 59 988 37 978 0.0 956
MS.gene049742.t1 MTR_2g059590 53.387 871 382 10 130 988 45 903 0.0 928
MS.gene049742.t1 MTR_4g113200 50.169 889 417 11 113 988 1 876 0.0 881
MS.gene049742.t1 MTR_2g059790 56.441 590 241 6 409 988 11 594 0.0 674
MS.gene049742.t1 MTR_2g059590 48.065 672 326 8 130 792 45 702 0.0 634
MS.gene049742.t1 MTR_5g042590 38.713 886 472 23 143 988 162 1016 0.0 579
MS.gene049742.t1 MTR_3g078647 35.849 901 508 23 128 987 51 922 1.09e-157 489
MS.gene049742.t1 MTR_5g087870 34.517 901 502 19 139 987 83 947 1.19e-149 468
MS.gene049742.t1 MTR_5g087890 35.388 876 512 21 139 987 43 891 6.39e-147 460
MS.gene049742.t1 MTR_6g043180 33.933 890 518 18 139 987 42 902 8.99e-146 457
MS.gene049742.t1 MTR_3g010650 33.933 890 512 20 139 988 23 876 1.36e-145 456
MS.gene049742.t1 MTR_3g083300 33.520 892 527 22 139 988 42 909 7.76e-138 436
MS.gene049742.t1 MTR_5g087870 33.185 901 492 20 139 987 83 925 1.81e-135 431
MS.gene049742.t1 MTR_4g083610 32.594 902 527 27 87 949 66 925 6.73e-130 417
MS.gene049742.t1 MTR_2g028910 33.026 869 493 24 125 949 158 981 2.72e-128 414
MS.gene049742.t1 MTR_3g101730 52.427 206 42 4 685 890 25 174 2.83e-54 187
MS.gene049742.t1 MTR_8g105540 66.667 165 40 4 16 169 12 172 5.86e-46 163
MS.gene049742.t1 MTR_6g037320 78.378 74 16 0 671 744 1 74 1.66e-32 122
MS.gene049742.t1 MTR_1g038380 28.406 345 177 12 513 852 145 424 5.69e-25 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049742.t1 AT2G27880 57.946 925 348 15 84 988 94 997 0.0 1040
MS.gene049742.t1 AT1G48410 56.545 932 361 16 90 988 128 1048 0.0 1002
MS.gene049742.t1 AT1G48410 56.424 934 361 17 90 988 128 1050 0.0 997
MS.gene049742.t1 AT1G48410 56.424 934 361 17 90 988 128 1050 0.0 997
MS.gene049742.t1 AT5G43810 54.514 875 372 11 131 988 123 988 0.0 940
MS.gene049742.t1 AT5G43810 54.514 875 372 11 131 988 123 988 0.0 940
MS.gene049742.t1 AT5G43810 54.514 875 372 11 131 988 123 988 0.0 940
MS.gene049742.t1 AT5G43810 54.514 875 372 11 131 988 123 988 0.0 940
MS.gene049742.t1 AT1G69440 38.212 895 467 25 131 988 145 990 0.0 563
MS.gene049742.t1 AT2G27040 35.470 905 501 21 134 988 53 924 9.79e-163 502
MS.gene049742.t1 AT2G27040 35.470 905 501 21 134 988 53 924 9.79e-163 502
MS.gene049742.t1 AT5G21150 34.403 904 526 22 122 988 23 896 9.54e-155 480
MS.gene049742.t1 AT2G32940 34.611 887 506 20 139 988 29 878 3.08e-141 444
MS.gene049742.t1 AT1G31280 32.279 917 535 25 70 949 96 963 2.45e-133 427
MS.gene049742.t1 AT5G21030 33.258 890 492 25 139 988 27 854 1.01e-128 410
MS.gene049742.t1 AT1G31290 32.984 858 507 20 123 949 249 1069 5.39e-128 416
MS.gene049742.t1 AT1G31290 32.984 858 507 20 123 949 287 1107 9.42e-128 416
MS.gene049742.t1 AT1G31290 32.984 858 507 20 123 949 323 1143 1.82e-127 416
MS.gene049742.t1 AT5G21030 33.483 890 486 27 139 988 27 850 6.57e-127 406

Find 265 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGTTGCAGCCTTCCTTTC+TGG 0.125276 4.2:-46992600 None:intergenic
TAAAATGTATCTGGAGAATT+TGG 0.162114 4.2:+46992818 MS.gene049742:CDS
TTGCTCTTCGTTCAATCTTT+TGG 0.200511 4.2:-46991639 None:intergenic
AAAGCGTGAACGCGAGTTTA+AGG 0.220933 4.2:+46990299 MS.gene049742:CDS
GATAAACCAACTATAATATT+TGG 0.229424 4.2:+46993008 MS.gene049742:CDS
TTCTGACTGCAGCTCAAATA+TGG 0.265038 4.2:+46991982 MS.gene049742:intron
TAATTTCTTCCCGTTGAATC+TGG 0.274864 4.2:-46993228 None:intergenic
TCAATTTCATTTGAATTGGC+TGG 0.282712 4.2:-46992523 None:intergenic
TTTCACATTCATGCTTTATA+TGG 0.282737 4.2:-46992740 None:intergenic
CTTTAGTGCAGATCAGTTAC+AGG 0.284815 4.2:+46994406 MS.gene049742:CDS
ATACGTGTAACACAAGTTAT+TGG 0.285490 4.2:-46994435 None:intergenic
ATCGGGTGTGATGTCTCTTT+TGG 0.290153 4.2:-46994010 None:intergenic
CATGAATGTGAAACTAAATT+AGG 0.293832 4.2:+46992750 MS.gene049742:CDS
TTTCTCAATTTCATTTGAAT+TGG 0.299617 4.2:-46992527 None:intergenic
ATGGGATTGTCCCTCAATAT+TGG 0.308151 4.2:+46990650 MS.gene049742:CDS
GTGAGTTTGGTATCAATATA+AGG 0.314846 4.2:+46991843 MS.gene049742:CDS
TTCCCTGACCGTCCTGGTTT+CGG 0.318886 4.2:+46988814 MS.gene049742:CDS
GGGGCACAGGGGCCTCTTGG+CGG 0.324509 4.2:+46990578 MS.gene049742:CDS
GCACAGGGGCCTCTTGGCGG+TGG 0.325849 4.2:+46990581 MS.gene049742:CDS
GGCAGTGCTGCAACAGAGTT+GGG 0.326213 4.2:-46994775 None:intergenic
TTTGAATTGGCTGGGGCTAT+AGG 0.331299 4.2:-46992514 None:intergenic
AGCTCTTGACATTGCTTTGC+GGG 0.331516 4.2:+46990413 MS.gene049742:CDS
ACAAAGTCAGTCACACAAAT+TGG 0.336326 4.2:-46990790 None:intergenic
ATGCATAAGGAGTCCCTATT+GGG 0.343290 4.2:+46990031 MS.gene049742:CDS
ATGGTGGCAAGGTGGAATTT+TGG 0.345519 4.2:+46992298 MS.gene049742:CDS
CAATTTCATTTGAATTGGCT+GGG 0.356644 4.2:-46992522 None:intergenic
GAGAACAAAGGATCCTCTTC+TGG 0.357763 4.2:+46990148 MS.gene049742:CDS
CAGGAATCCTATTCCCCAAT+AGG 0.362540 4.2:-46990045 None:intergenic
TTGGCGGTGGGACAGAATAT+TGG 0.363402 4.2:+46990594 MS.gene049742:CDS
CACTTTCTTCGATGCAATCT+CGG 0.363875 4.2:-46989978 None:intergenic
CATAGGCCTCGTGTCACTTC+CGG 0.366618 4.2:-46991475 None:intergenic
TTCATCTTTGCCGCTTTCCT+TGG 0.372765 4.2:-46992795 None:intergenic
GTTTCTCCGTCGTTTGCAGC+TGG 0.374422 4.2:+46990368 MS.gene049742:CDS
GCTTGCATTGGAGACGGTTC+CGG 0.383167 4.2:+46988756 MS.gene049742:CDS
AAAGATGAATAAAATGTATC+TGG 0.384065 4.2:+46992809 MS.gene049742:CDS
AGGAGTCCCTATTGGGGAAT+AGG 0.386970 4.2:+46990038 MS.gene049742:CDS
CCACTTGCAGAACCGGAATC+AGG 0.388462 4.2:-46994739 None:intergenic
GACAAAGTTGTGTGTGAGTT+TGG 0.389128 4.2:+46991830 MS.gene049742:CDS
CCGGTTCTGCAAGTGGTAAC+AGG 0.390122 4.2:+46994746 MS.gene049742:CDS
CCTGTTACCACTTGCAGAAC+CGG 0.392857 4.2:-46994746 None:intergenic
TGTATGAGATGGATGCAATT+TGG 0.393943 4.2:+46993583 MS.gene049742:CDS
AATGCATAAGGAGTCCCTAT+TGG 0.398682 4.2:+46990030 MS.gene049742:CDS
GAAGAAACGGTGACTGTAAC+CGG 0.399455 4.2:-46988589 None:intergenic
TCAGGCTTGTGCCTCATTTG+AGG 0.403027 4.2:+46993953 MS.gene049742:intron
AGCAATGTCAAGAGCTTGTA+TGG 0.405571 4.2:-46990406 None:intergenic
TAAAACCTCCCCTTGAAATC+AGG 0.407862 4.2:-46992637 None:intergenic
TCCGCTCCAAATATTATAGT+TGG 0.410769 4.2:-46993014 None:intergenic
GCATTTCAACAGAGATCCTT+TGG 0.410985 4.2:+46992489 MS.gene049742:intron
AAGTGAAGGGCAGTTTAGTC+AGG 0.411946 4.2:+46993554 MS.gene049742:CDS
TAGTTGGTTTATCAGTTACT+AGG 0.412044 4.2:-46992998 None:intergenic
TAATATCACTTTCCCTCTGA+TGG 0.413033 4.2:-46991697 None:intergenic
CACTAATGTAGCAGCGAGCT+CGG 0.415952 4.2:-46994705 None:intergenic
ACAACCACAAAAGTAACTTT+TGG 0.421539 4.2:-46993987 None:intergenic
AAGCTTACTGCAGCTATAGA+AGG 0.423121 4.2:-46993071 None:intergenic
AGAAACAAAACATCCTCAAA+AGG 0.424173 4.2:+46993267 MS.gene049742:CDS
CCTCAAAAGGGAACTGTGCC+TGG 0.426862 4.2:+46993280 MS.gene049742:CDS
TCCGTCAATGCTCCACGATC+AGG 0.432430 4.2:+46988496 MS.gene049742:CDS
TCACTTCCGGCTTGGAGAGC+GGG 0.436187 4.2:-46991462 None:intergenic
TGACCGAAACCAGGACGGTC+AGG 0.438282 4.2:-46988817 None:intergenic
CAGACTCTTCCTCCCATCAT+AGG 0.440017 4.2:-46990068 None:intergenic
GAAGGACTTGAGTCTTCTCC+TGG 0.440116 4.2:-46993053 None:intergenic
TTCTTGATTGTCTAGGTTGG+TGG 0.445134 4.2:+46992933 MS.gene049742:intron
CATATTCCATTGTCCCATCA+TGG 0.445861 4.2:-46992025 None:intergenic
TGAGTTTGGTATCAATATAA+GGG 0.446314 4.2:+46991844 MS.gene049742:CDS
TGCAGCACTGCCCTCAATCA+TGG 0.447218 4.2:+46994786 MS.gene049742:CDS
GGTTACAATTAAGTTAGCTT+CGG 0.448375 4.2:+46990320 MS.gene049742:CDS
TCTATAGATCAAATAATAAA+CGG 0.448662 4.2:+46993395 MS.gene049742:CDS
GAAAGCCTTGAGAGGTCTTA+AGG 0.450964 4.2:+46991082 MS.gene049742:CDS
TCCATCTTCCACTCCAACTC+CGG 0.451903 4.2:+46988570 MS.gene049742:CDS
TCCGTCTCTGCCTCCGACGA+AGG 0.452235 4.2:+46988696 MS.gene049742:CDS
AATAGGATTCCTGCCTATGA+TGG 0.454125 4.2:+46990055 MS.gene049742:CDS
CTGTAAAATATGATCCTCTC+AGG 0.455206 4.2:-46993421 None:intergenic
CAGAACTGACGGGAAAGAAT+CGG 0.455652 4.2:-46994028 None:intergenic
CCACGATCAGGCCGCGGCGG+TGG 0.457183 4.2:+46988508 MS.gene049742:CDS
TATAAAGGTGGTGGCATCCA+TGG 0.459482 4.2:+46993165 MS.gene049742:intron
CGTCGTCTCAGAAGGCGATA+AGG 0.461189 4.2:+46988791 MS.gene049742:CDS
AGAGCTTGTATGGTTTCATA+AGG 0.462204 4.2:-46990396 None:intergenic
AAATTCCCTGGGATGGCAAA+TGG 0.464334 4.2:-46994197 None:intergenic
CTTGAGTCTTCTCCTGGATG+AGG 0.464947 4.2:-46993047 None:intergenic
TCTCTCACGGAGGGATCATA+AGG 0.466958 4.2:+46991111 MS.gene049742:CDS
GCCTGATCGTGGAGCATTGA+CGG 0.467240 4.2:-46988497 None:intergenic
GATGTGGAAAATCCTGATTC+CGG 0.467393 4.2:+46994727 MS.gene049742:CDS
TGTACTCGATCGGTGTCAAT+AGG 0.470355 4.2:+46994558 MS.gene049742:CDS
GCCTCGTGTCACTTCCGGCT+TGG 0.470871 4.2:-46991470 None:intergenic
AGGAATCCTATTCCCCAATA+GGG 0.471191 4.2:-46990044 None:intergenic
CAACTTTGTCTATGTTGAAA+CGG 0.473789 4.2:-46991817 None:intergenic
AGTTGGTTTATCAGTTACTA+GGG 0.475352 4.2:-46992997 None:intergenic
TAGCTTTGTCAAATTGAGCC+TGG 0.476967 4.2:+46991605 MS.gene049742:intron
CCCCTGTACTTTGTGACGCA+AGG 0.482813 4.2:-46993193 None:intergenic
GGCTTTAAAGATTAATGTGA+AGG 0.483336 4.2:+46992839 MS.gene049742:CDS
TATTTGATCTATAGAAAGCC+AGG 0.483373 4.2:-46993387 None:intergenic
GGCTTGTGCCTCATTTGAGG+AGG 0.484796 4.2:+46993956 MS.gene049742:intron
ACTTTCTTCGATGCAATCTC+GGG 0.485239 4.2:-46989977 None:intergenic
AATATCACTTTCCCTCTGAT+GGG 0.485775 4.2:-46991696 None:intergenic
GGTTGCCGCTAGTTCGAGTT+CGG 0.485788 4.2:+46988657 MS.gene049742:CDS
GGTTTCTGCCCAGATTCAAC+GGG 0.486104 4.2:+46993219 MS.gene049742:CDS
CAAACAACATACTATTCCCT+TGG 0.487493 4.2:-46992388 None:intergenic
ATCCCATCTGTGTTGGCCTA+AGG 0.489430 4.2:-46990634 None:intergenic
GGGCAGTGCTGCAACAGAGT+TGG 0.490632 4.2:-46994776 None:intergenic
TCCATTACCCTTTACGTCGA+AGG 0.491707 4.2:+46990102 MS.gene049742:CDS
ACAGATGAATGATAAATAAC+CGG 0.492517 4.2:-46988625 None:intergenic
TTCTGCTCCGTCGTCTCAGA+AGG 0.494270 4.2:+46988783 MS.gene049742:CDS
ACTTGAAAAGAAGCTTGCAT+TGG 0.495997 4.2:+46988744 MS.gene049742:CDS
GGCCTTGCGTCACAAAGTAC+AGG 0.497162 4.2:+46993191 MS.gene049742:CDS
ACCTTCGACGTAAAGGGTAA+TGG 0.497958 4.2:-46990103 None:intergenic
AAGCCTTAGGCCAACACAGA+TGG 0.498729 4.2:+46990631 MS.gene049742:CDS
CTGATGGGGACGCTGACAGT+TGG 0.500384 4.2:-46991681 None:intergenic
ACCTTCGTCGGAGGCAGAGA+CGG 0.500660 4.2:-46988697 None:intergenic
AATTAAGTTAGCTTCGGAAA+CGG 0.501674 4.2:+46990326 MS.gene049742:CDS
ATATTCCATTGTCCCATCAT+GGG 0.501977 4.2:-46992024 None:intergenic
GTCACTTCCGGCTTGGAGAG+CGG 0.502635 4.2:-46991463 None:intergenic
AGAACTGACGGGAAAGAATC+GGG 0.502999 4.2:-46994027 None:intergenic
TGTTTCAGATGTTTCTTCGA+GGG 0.503034 4.2:+46990756 MS.gene049742:intron
CTCTTCCTCCCATCATAGGC+AGG 0.504888 4.2:-46990064 None:intergenic
GAAACAAAACATCCTCAAAA+GGG 0.505567 4.2:+46993268 MS.gene049742:CDS
TCAGTTGGTGAAAATGCATA+AGG 0.506488 4.2:+46990018 MS.gene049742:CDS
AACTCCGCACAAAATTGAGT+TGG 0.508580 4.2:-46992348 None:intergenic
ATAAGGTTCCCTGACCGTCC+TGG 0.508648 4.2:+46988808 MS.gene049742:CDS
AAGCTCTTGACATTGCTTTG+CGG 0.510525 4.2:+46990412 MS.gene049742:CDS
GAACTCGAACTAGCGGCAAC+CGG 0.513092 4.2:-46988655 None:intergenic
TAGAAGTAAAACCAATATTG+AGG 0.513680 4.2:-46990661 None:intergenic
ACTCCGCACAAAATTGAGTT+GGG 0.514577 4.2:-46992347 None:intergenic
CACAGGGGCCTCTTGGCGGT+GGG 0.515286 4.2:+46990582 MS.gene049742:CDS
TTGTTTCAGATGTTTCTTCG+AGG 0.515385 4.2:+46990755 MS.gene049742:intron
TCATTCATCTGTCGTAGCAC+CGG 0.517528 4.2:+46988636 MS.gene049742:CDS
AGGAAGAGTCTGTATACTGC+TGG 0.519034 4.2:+46990079 MS.gene049742:CDS
AAGGCTATTATCAAAGCCTT+AGG 0.519355 4.2:+46990618 MS.gene049742:CDS
CAACTGATTGATAACATCCC+TGG 0.519584 4.2:-46990002 None:intergenic
ACACAACCATTTGCCATCCC+AGG 0.521979 4.2:+46994191 MS.gene049742:CDS
ACTAATGTAGCAGCGAGCTC+GGG 0.526288 4.2:-46994704 None:intergenic
ACGGTGACTGTAACCGGAGT+TGG 0.526295 4.2:-46988583 None:intergenic
ACCGGAGTTGGAGTGGAAGA+TGG 0.526655 4.2:-46988571 None:intergenic
CTGGTTTCGGTCAAGTTGGA+AGG 0.527152 4.2:+46988827 MS.gene049742:CDS
TGGTTTCTGCCCAGATTCAA+CGG 0.530200 4.2:+46993218 MS.gene049742:CDS
CTTGTGCCTCATTTGAGGAG+GGG 0.531453 4.2:+46993958 MS.gene049742:CDS
CTTCCAACTTGACCGAAACC+AGG 0.532618 4.2:-46988826 None:intergenic
TTGAGTCTTCTCCTGGATGA+GGG 0.533127 4.2:-46993046 None:intergenic
AATTTCTTCCCGTTGAATCT+GGG 0.533165 4.2:-46993227 None:intergenic
CGTCCTGGTTTCGGTCAAGT+TGG 0.533821 4.2:+46988823 MS.gene049742:CDS
CCACCGCCGCGGCCTGATCG+TGG 0.533927 4.2:-46988508 None:intergenic
TAATGTTGCTACATTTCAGA+TGG 0.533939 4.2:-46990441 None:intergenic
TTTATCTGAACAGCCATGCT+GGG 0.535692 4.2:+46994224 MS.gene049742:CDS
TTGCATCGAAGAAAGTGTCC+AGG 0.535895 4.2:+46989984 MS.gene049742:CDS
GGTGGTCGTAACGGTGGTCG+TGG 0.536017 4.2:+46988526 MS.gene049742:CDS
GCTTGTGCCTCATTTGAGGA+GGG 0.536252 4.2:+46993957 MS.gene049742:CDS
ATCTGTCTGATCAGAACTGA+CGG 0.540297 4.2:-46994039 None:intergenic
GAGAAGTCGCCGGAGAAAGT+TGG 0.540705 4.2:-46988465 None:intergenic
GAACATTTCAATGAGAGATA+CGG 0.540923 4.2:+46991414 MS.gene049742:CDS
GCTTGGAGAGCGGGAAGAAG+TGG 0.541406 4.2:-46991453 None:intergenic
GACGACGGAGCAGAAGCCTC+CGG 0.541407 4.2:-46988775 None:intergenic
AGAAGTAAAACCAATATTGA+GGG 0.542446 4.2:-46990660 None:intergenic
CTTCTTCCCGCTCTCCAAGC+CGG 0.543891 4.2:+46991456 MS.gene049742:CDS
TTGTAGAAAGTGGTTAATGG+TGG 0.547686 4.2:+46992282 MS.gene049742:intron
GACTTGCACATGGAAATGAT+TGG 0.547744 4.2:-46988866 None:intergenic
CTGTGCCTGGTGGAATGATA+AGG 0.549809 4.2:+46993293 MS.gene049742:CDS
AGGTGGTGGCATCCATGGAT+TGG 0.550116 4.2:+46993170 MS.gene049742:intron
GGCCGCGGCGGTGGTCGTAA+CGG 0.551138 4.2:+46988517 MS.gene049742:CDS
TCTGATCAGACAGATAAAAG+TGG 0.551198 4.2:+46994047 MS.gene049742:CDS
AATGCTCCACGATCAGGCCG+CGG 0.552033 4.2:+46988502 MS.gene049742:CDS
GACTGTAACCGGAGTTGGAG+TGG 0.553046 4.2:-46988578 None:intergenic
CGTCACAAAGTACAGGGGAA+TGG 0.553940 4.2:+46993198 MS.gene049742:CDS
GGTTAATATGTGTCAAGCCA+AGG 0.555165 4.2:+46992371 MS.gene049742:CDS
TTCTTCATCAACATCAGCGC+CGG 0.555185 4.2:+46988606 MS.gene049742:CDS
AAAAGTGGAAACATAATGCC+AGG 0.555213 4.2:+46994062 MS.gene049742:CDS
TGACTCAATGTTGCGAGCCA+AGG 0.555528 4.2:+46992778 MS.gene049742:CDS
TCGCCGGAGAAAGTTGGTTA+CGG 0.557506 4.2:-46988459 None:intergenic
TCTTACCTTAAGACCTCTCA+AGG 0.559414 4.2:-46991087 None:intergenic
CGCTGATGTTGATGAAGAAA+CGG 0.560591 4.2:-46988602 None:intergenic
AACGGTGGTCGTGGTTCACA+CGG 0.561618 4.2:+46988535 MS.gene049742:CDS
AACAACACATGATAATGAGT+TGG 0.562837 4.2:-46994371 None:intergenic
GATGTAACACACCCTCATCC+AGG 0.564270 4.2:+46993035 MS.gene049742:CDS
ATAGGATTCCTGCCTATGAT+GGG 0.565127 4.2:+46990056 MS.gene049742:CDS
CTTATCGCCTTCTGAGACGA+CGG 0.565197 4.2:-46988790 None:intergenic
ATCAGAGATGGAGTAAGTGA+AGG 0.566585 4.2:+46993540 MS.gene049742:intron
AGCCTTAGGCCAACACAGAT+GGG 0.570716 4.2:+46990632 MS.gene049742:CDS
TCAGAGATGGAGTAAGTGAA+GGG 0.571301 4.2:+46993541 MS.gene049742:intron
ATAGTACAAACCAGAAAGGA+AGG 0.571897 4.2:+46992590 MS.gene049742:CDS
AGGGACAATCCCATCTGTGT+TGG 0.571974 4.2:-46990641 None:intergenic
TCGCCGTAACCAACTTTCTC+CGG 0.572583 4.2:+46988456 MS.gene049742:CDS
GGTTCAATCTAGAAAAGCTA+AGG 0.574538 4.2:-46992326 None:intergenic
GTTGGTTACGGCGAGGATCA+CGG 0.575866 4.2:-46988447 None:intergenic
CTTAATAGTACAAACCAGAA+AGG 0.576432 4.2:+46992586 MS.gene049742:CDS
AATTTCATTTGAATTGGCTG+GGG 0.576459 4.2:-46992521 None:intergenic
AAAGAAGCTTGCATTGGAGA+CGG 0.576628 4.2:+46988750 MS.gene049742:CDS
CCTGATTCCGGTTCTGCAAG+TGG 0.577895 4.2:+46994739 MS.gene049742:CDS
TGCATTGGAGACGGTTCCGG+AGG 0.579165 4.2:+46988759 MS.gene049742:CDS
ACTGTCAGCGTCCCCATCAG+AGG 0.583430 4.2:+46991684 MS.gene049742:CDS
ATATCACTTTCCCTCTGATG+GGG 0.584736 4.2:-46991695 None:intergenic
GACCGAAACCAGGACGGTCA+GGG 0.585562 4.2:-46988816 None:intergenic
CACAACCATTTGCCATCCCA+GGG 0.586919 4.2:+46994192 MS.gene049742:CDS
TCTGTCTGATCAGAACTGAC+GGG 0.589348 4.2:-46994038 None:intergenic
TAGATACCCCTCCTCAAATG+AGG 0.592498 4.2:-46993964 None:intergenic
TCACGTGTCAGAACCAGAAG+AGG 0.592795 4.2:-46990161 None:intergenic
ACCTCCATTGGAAAATACAT+AGG 0.595426 4.2:-46991492 None:intergenic
CAGGGATGTTATCAATCAGT+TGG 0.595980 4.2:+46990003 MS.gene049742:CDS
GCCTTGCGTCACAAAGTACA+GGG 0.595989 4.2:+46993192 MS.gene049742:CDS
GTCAAATTGAGCCTGGACAA+AGG 0.596533 4.2:+46991612 MS.gene049742:CDS
ATAAGGAGTTACAAGGTGAC+CGG 0.599243 4.2:+46991128 MS.gene049742:CDS
TTCACAATGTCTCGTCGCAG+TGG 0.599990 4.2:+46988403 None:intergenic
CATTACCTTATCATTCCACC+AGG 0.600279 4.2:-46993298 None:intergenic
AGTGGTTAATGGTGGCAAGG+TGG 0.600313 4.2:+46992290 MS.gene049742:CDS
CAGATCACGAAAGCCTTGAG+AGG 0.602088 4.2:+46991074 MS.gene049742:intron
GTTAATATGTGTCAAGCCAA+GGG 0.603461 4.2:+46992372 MS.gene049742:CDS
TTATGCAAGGTGTACTCGAT+CGG 0.603490 4.2:+46994548 MS.gene049742:CDS
TATCAGCAGCGACTTGCACA+TGG 0.604087 4.2:-46988876 None:intergenic
TAAACCTATGTATACCGTTG+GGG 0.608267 4.2:-46991903 None:intergenic
CTGTCAGCGTCCCCATCAGA+GGG 0.608962 4.2:+46991685 MS.gene049742:CDS
TGTGACGCAAGGCCAATCCA+TGG 0.611893 4.2:-46993182 None:intergenic
CGCGGCGGTGGTCGTAACGG+TGG 0.614699 4.2:+46988520 MS.gene049742:CDS
AGCTCGGGAAGCTAACAAGT+GGG 0.614711 4.2:-46994689 None:intergenic
GTCGGAGGCAGAGACGGAGA+CGG 0.614777 4.2:-46988691 None:intergenic
AGGTAAGATTCTCTCACGGA+GGG 0.617293 4.2:+46991102 MS.gene049742:CDS
AACAAGTGGGCATAATACGC+AGG 0.617579 4.2:-46994676 None:intergenic
CAGTGCTGCAACAGAGTTGG+GGG 0.618311 4.2:-46994773 None:intergenic
GCTCCACGATCAGGCCGCGG+CGG 0.618618 4.2:+46988505 MS.gene049742:CDS
TTGACCCCATGATGGGACAA+TGG 0.619403 4.2:+46992019 MS.gene049742:CDS
TGCATCGAAGAAAGTGTCCA+GGG 0.621024 4.2:+46989985 MS.gene049742:CDS
TCCGTCAAAACCTTCGTCGG+AGG 0.621164 4.2:-46988706 None:intergenic
GCTGGGGCTATAGGTACCAA+AGG 0.622248 4.2:-46992505 None:intergenic
ACCAACTATAATATTTGGAG+CGG 0.623264 4.2:+46993013 MS.gene049742:CDS
GCAGTGCTGCAACAGAGTTG+GGG 0.624034 4.2:-46994774 None:intergenic
AGGCAGAGACGGAGACGGAA+CGG 0.625655 4.2:-46988686 None:intergenic
AGTTGGAGTGGAAGATGGAA+CGG 0.627229 4.2:-46988566 None:intergenic
ATAATAAACGGAAGCCTGAG+AGG 0.630600 4.2:+46993407 MS.gene049742:CDS
GACAATCCAGCTGCAAACGA+CGG 0.631571 4.2:-46990374 None:intergenic
GAGCTCGGGAAGCTAACAAG+TGG 0.632350 4.2:-46994690 None:intergenic
TTTAGTGCAGATCAGTTACA+GGG 0.632903 4.2:+46994407 MS.gene049742:CDS
GAAGATTGTTGAGAAGTCGC+CGG 0.635262 4.2:-46988475 None:intergenic
TATTCTGTCCCACCGCCAAG+AGG 0.635481 4.2:-46990590 None:intergenic
AGGGATCATAAGGAGTTACA+AGG 0.636082 4.2:+46991121 MS.gene049742:CDS
GTCTGATCAAGATCGTGTCA+AGG 0.636610 4.2:+46990849 MS.gene049742:CDS
GTTGGTTTATCAGTTACTAG+GGG 0.639280 4.2:-46992996 None:intergenic
TGCATAAGGAGTCCCTATTG+GGG 0.639308 4.2:+46990032 MS.gene049742:CDS
CAAAAGGGAACTGTGCCTGG+TGG 0.640464 4.2:+46993283 MS.gene049742:CDS
TGACTGCAGCTCAAATATGG+TGG 0.646000 4.2:+46991985 MS.gene049742:intron
GACGGAGAAACTGAGCAAGA+TGG 0.646365 4.2:-46990356 None:intergenic
TATTCCATTGTCCCATCATG+GGG 0.648188 4.2:-46992023 None:intergenic
ATGTTGCGAGCCAAGGAAAG+CGG 0.650631 4.2:+46992785 MS.gene049742:CDS
GAAAGTGGTTAATGGTGGCA+AGG 0.650897 4.2:+46992287 MS.gene049742:intron
TCCAAGCCGGAAGTGACACG+AGG 0.650993 4.2:+46991469 MS.gene049742:CDS
CACCGTTACGACCACCGCCG+CGG 0.652231 4.2:-46988519 None:intergenic
TCGCTGCTACATTAGTGATG+TGG 0.653585 4.2:+46994711 MS.gene049742:CDS
TGCTTGATGACAAAGTAACT+CGG 0.655199 4.2:+46991379 MS.gene049742:CDS
TGAGATGGATGCAATTTGGA+AGG 0.658323 4.2:+46993587 MS.gene049742:CDS
GCTTCCGTCAAAACCTTCGT+CGG 0.661636 4.2:-46988709 None:intergenic
GGTGGGACAGAATATTGGAA+AGG 0.662462 4.2:+46990599 MS.gene049742:CDS
GGATTCCTGCCTATGATGGG+AGG 0.665713 4.2:+46990059 MS.gene049742:CDS
CTTAAGGTAAGATTCTCTCA+CGG 0.670373 4.2:+46991098 MS.gene049742:CDS
GTATTACTTGAATCCCAGCA+TGG 0.677912 4.2:-46994237 None:intergenic
TGAATTCGACAAGAACTGCA+AGG 0.678287 4.2:+46992558 MS.gene049742:CDS
TATAACTGCATCATTCAGCA+CGG 0.679587 4.2:-46992964 None:intergenic
AAACCTATGTATACCGTTGG+GGG 0.688291 4.2:-46991902 None:intergenic
TGAAATTGTCAAAGGAACTG+TGG 0.689720 4.2:+46994165 MS.gene049742:intron
CAACTTGACCGAAACCAGGA+CGG 0.691837 4.2:-46988822 None:intergenic
TGAAACCGAACTCGAACTAG+CGG 0.693620 4.2:-46988662 None:intergenic
GTTTGGTATCAATATAAGGG+AGG 0.701851 4.2:+46991847 MS.gene049742:CDS
AACTTGGTTGATGAGAACAA+AGG 0.702564 4.2:+46990136 MS.gene049742:CDS
GGAGAAAGTTGGTTACGGCG+AGG 0.708758 4.2:-46988454 None:intergenic
AAGTGGGCATAATACGCAGG+AGG 0.709427 4.2:-46994673 None:intergenic
TCAGGTATACTGTTGCAGGG+AGG 0.716268 4.2:+46990534 MS.gene049742:intron
AAGGTAAGATTCTCTCACGG+AGG 0.718698 4.2:+46991101 MS.gene049742:CDS
GGTGGTCGTGGTTCACACGG+CGG 0.731103 4.2:+46988538 MS.gene049742:CDS
CCTTGCGTCACAAAGTACAG+GGG 0.757115 4.2:+46993193 MS.gene049742:CDS
TTACGGCGAGGATCACGGCG+AGG 0.764698 4.2:-46988442 None:intergenic
ACTCACGTTAGGTCTCTGAG+TGG 0.780188 4.2:-46991164 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTATTTAATATTTTT+AGG + chr4.2:46989943-46989962 MS.gene049742:intron 0.0%
!! AACAAAAATAAAATAAAATG+TGG - chr4.2:46993629-46993648 None:intergenic 10.0%
!! TTCATAAAAAAACAAATTAT+GGG - chr4.2:46989577-46989596 None:intergenic 10.0%
!! AAAAAAACGGTTATATTTAA+AGG + chr4.2:46989142-46989161 MS.gene049742:intron 15.0%
!! AAAGTGATATTAAAAATGTA+TGG + chr4.2:46991708-46991727 MS.gene049742:intron 15.0%
!! AGATTATTAAATATTACACA+AGG - chr4.2:46991953-46991972 None:intergenic 15.0%
!! CTATTGTGTAATATTTAAAA+AGG + chr4.2:46991242-46991261 MS.gene049742:intron 15.0%
!! GGTTTATACTTAATAAAATT+TGG + chr4.2:46991920-46991939 MS.gene049742:intron 15.0%
!! GTTCATAAAAAAACAAATTA+TGG - chr4.2:46989578-46989597 None:intergenic 15.0%
!! TCTATAGATCAAATAATAAA+CGG + chr4.2:46993395-46993414 MS.gene049742:CDS 15.0%
!!! AAAGAAATTTTTAGTTTTAG+AGG + chr4.2:46989117-46989136 MS.gene049742:intron 15.0%
!!! AACTAAATTATAGTTTTGTA+TGG - chr4.2:46994621-46994640 None:intergenic 15.0%
!!! ATTTTAAGTTGAATTTTTCA+AGG + chr4.2:46990821-46990840 MS.gene049742:CDS 15.0%
!!! GATTTTTCTTTTAATTTTCA+GGG + chr4.2:46993357-46993376 MS.gene049742:intron 15.0%
!!! TATCACATTGTTTTTTTTTA+AGG - chr4.2:46989906-46989925 None:intergenic 15.0%
!!! TGATTTTTCTTTTAATTTTC+AGG + chr4.2:46993356-46993375 MS.gene049742:intron 15.0%
!!! TTTTAACTAAATGATACATA+AGG + chr4.2:46993455-46993474 MS.gene049742:intron 15.0%
!!! TTTTGATGAATTTTTCAATT+CGG + chr4.2:46993928-46993947 MS.gene049742:intron 15.0%
!!! TTTTTGTTTATTATGTTGAT+AGG + chr4.2:46989229-46989248 MS.gene049742:intron 15.0%
!! AAAAAAGAAAATATGAGATC+AGG - chr4.2:46994518-46994537 None:intergenic 20.0%
!! AAAAAGAAAATATGAGATCA+GGG - chr4.2:46994517-46994536 None:intergenic 20.0%
!! AAAAATTTAACCATTGTCAT+AGG - chr4.2:46992240-46992259 None:intergenic 20.0%
!! AAAATCTAAACACTTCAAAT+TGG - chr4.2:46989812-46989831 None:intergenic 20.0%
!! AAAGATGAATAAAATGTATC+TGG + chr4.2:46992809-46992828 MS.gene049742:CDS 20.0%
!! AAATGAAATGTCAATTATGA+AGG - chr4.2:46991775-46991794 None:intergenic 20.0%
!! AATGAAATGTCAATTATGAA+GGG - chr4.2:46991774-46991793 None:intergenic 20.0%
!! ATAATTGACATTTCATTTCT+TGG + chr4.2:46991777-46991796 MS.gene049742:intron 20.0%
!! ATATTTAAAGGACTGAATAT+TGG + chr4.2:46989154-46989173 MS.gene049742:intron 20.0%
!! ATCAGTACATATAGATAAAT+TGG - chr4.2:46994136-46994155 None:intergenic 20.0%
!! CAAGTAAAATAAAATTCAAG+AGG - chr4.2:46992146-46992165 None:intergenic 20.0%
!! CAAGTCTAAATTAATTTCTA+AGG + chr4.2:46992675-46992694 MS.gene049742:intron 20.0%
!! GACTAGAAAAATAAATGAAA+AGG - chr4.2:46994464-46994483 None:intergenic 20.0%
!! GATAAACCAACTATAATATT+TGG + chr4.2:46993008-46993027 MS.gene049742:CDS 20.0%
!! TCAATTAACATATTTAACCA+CGG + chr4.2:46993762-46993781 MS.gene049742:intron 20.0%
!! TTATGAACTTGTATTAAATG+AGG + chr4.2:46990907-46990926 MS.gene049742:intron 20.0%
!! TTTCTCAATTTCATTTGAAT+TGG - chr4.2:46992530-46992549 None:intergenic 20.0%
!!! AGCTTTATTTTAACATCTTT+AGG + chr4.2:46991306-46991325 MS.gene049742:intron 20.0%
!!! AGTTTTAGAGGAAAAAAAAA+CGG + chr4.2:46989129-46989148 MS.gene049742:intron 20.0%
!!! ATTTTATTTTTGTTTTCGGA+AGG + chr4.2:46993635-46993654 MS.gene049742:intron 20.0%
!!! CTAAATTAATTTCTAAGGTT+TGG + chr4.2:46992680-46992699 MS.gene049742:intron 20.0%
!!! TATTACTCTATTTTCTTTGT+TGG + chr4.2:46994583-46994602 MS.gene049742:intron 20.0%
!!! TATTTTATTTTTGAGTGTTC+AGG + chr4.2:46989331-46989350 MS.gene049742:intron 20.0%
!!! TATTTTTTGTGTGGTTTATT+TGG + chr4.2:46990462-46990481 MS.gene049742:intron 20.0%
!!! TTACAAAGTATTATGTGTTT+AGG + chr4.2:46989466-46989485 MS.gene049742:intron 20.0%
!!! TTGTAATTTGTTATCCATTA+AGG + chr4.2:46991352-46991371 MS.gene049742:intron 20.0%
!!! TTTTATTTTTGTTTTCGGAA+GGG + chr4.2:46993636-46993655 MS.gene049742:intron 20.0%
! AAAAACGAAAAACCTAAAGA+TGG - chr4.2:46989214-46989233 None:intergenic 25.0%
! AAAATAAAGTTACTCACGTT+AGG - chr4.2:46991178-46991197 None:intergenic 25.0%
! AAGTGTTTAGATTTGATTGT+TGG + chr4.2:46989739-46989758 MS.gene049742:intron 25.0%
! AATTAGTTACAATTGTGTTG+TGG + chr4.2:46989265-46989284 MS.gene049742:intron 25.0%
! ACAGATGAATGATAAATAAC+CGG - chr4.2:46988628-46988647 None:intergenic 25.0%
! AGAAGTAAAACCAATATTGA+GGG - chr4.2:46990663-46990682 None:intergenic 25.0%
! AGATAAAAATCAAATTCCCT+GGG - chr4.2:46994211-46994230 None:intergenic 25.0%
! ATACGAGCATACAAAATTAA+TGG - chr4.2:46994272-46994291 None:intergenic 25.0%
! ATATGTCATAAGAGAAAAGT+TGG + chr4.2:46989038-46989057 MS.gene049742:intron 25.0%
! ATGAAATGTCAATTATGAAG+GGG - chr4.2:46991773-46991792 None:intergenic 25.0%
! CAAACACAACCTATATAAAT+AGG - chr4.2:46991736-46991755 None:intergenic 25.0%
! CAAATCTAAACACTTCAAAT+TGG - chr4.2:46989734-46989753 None:intergenic 25.0%
! CAAGAAATAAATTGAAAACC+TGG - chr4.2:46994083-46994102 None:intergenic 25.0%
! CATCTAAGGAATAACTAAAA+TGG - chr4.2:46991206-46991225 None:intergenic 25.0%
! CATGAATGTGAAACTAAATT+AGG + chr4.2:46992750-46992769 MS.gene049742:CDS 25.0%
! CCACTTTCTACAAAATAAAA+AGG - chr4.2:46992275-46992294 None:intergenic 25.0%
! GTAAAAAAGGTTGTCAAAAT+GGG - chr4.2:46992450-46992469 None:intergenic 25.0%
! GTATATTATGATCCGATTTA+AGG + chr4.2:46990230-46990249 MS.gene049742:intron 25.0%
! TAAAAAAGGTTGTCAAAATG+GGG - chr4.2:46992449-46992468 None:intergenic 25.0%
! TAAAATGTATCTGGAGAATT+TGG + chr4.2:46992818-46992837 MS.gene049742:CDS 25.0%
! TAGAAGTAAAACCAATATTG+AGG - chr4.2:46990664-46990683 None:intergenic 25.0%
! TAGTTACTTACAATGTGTTA+TGG + chr4.2:46989388-46989407 MS.gene049742:intron 25.0%
! TGAATGCTTTCAAATTATTG+TGG + chr4.2:46992082-46992101 MS.gene049742:intron 25.0%
! TGAGTTTGGTATCAATATAA+GGG + chr4.2:46991844-46991863 MS.gene049742:CDS 25.0%
! TGTATGGTACCTATTTATAT+AGG + chr4.2:46991724-46991743 MS.gene049742:intron 25.0%
! TTTAGTTATTCCTTAGATGT+TGG + chr4.2:46991207-46991226 MS.gene049742:intron 25.0%
! TTTCACATTCATGCTTTATA+TGG - chr4.2:46992743-46992762 None:intergenic 25.0%
!! AGCAAGTAACTAATCTTTTA+AGG + chr4.2:46991657-46991676 MS.gene049742:CDS 25.0%
!! ATTTTGTAGAAAGTGGTTAA+TGG + chr4.2:46992279-46992298 MS.gene049742:intron 25.0%
!! GCAAGTAACTAATCTTTTAA+GGG + chr4.2:46991658-46991677 MS.gene049742:CDS 25.0%
!! TAATTTGTGTTTATCAGAGA+TGG + chr4.2:46993528-46993547 MS.gene049742:intron 25.0%
!! TTGATTTTATCATTTGTGAC+AGG + chr4.2:46990274-46990293 MS.gene049742:intron 25.0%
!!! AAATCGGTTTTTAATACTGA+TGG + chr4.2:46990193-46990212 MS.gene049742:intron 25.0%
!!! AACTCCTTATTTTATCTACA+AGG - chr4.2:46993854-46993873 None:intergenic 25.0%
!!! CCTTTTTATTTTGTAGAAAG+TGG + chr4.2:46992272-46992291 MS.gene049742:intron 25.0%
!!! GTTTTAATAATTTCATGCCA+AGG + chr4.2:46990970-46990989 MS.gene049742:intron 25.0%
!!! TAATTGATAGACTGTTTTTC+AGG + chr4.2:46990516-46990535 MS.gene049742:intron 25.0%
!!! TAGCAACATTATTTTTTGTG+TGG + chr4.2:46990453-46990472 MS.gene049742:intron 25.0%
!!! TTGTTGTTTGAAATTGTCAA+AGG + chr4.2:46994157-46994176 MS.gene049742:intron 25.0%
!!! TTTATTTTTGTTTTCGGAAG+GGG + chr4.2:46993637-46993656 MS.gene049742:intron 25.0%
AAAAATCAGTTGTCTCAACA+TGG - chr4.2:46993344-46993363 None:intergenic 30.0%
AAAATCAGTTGTCTCAACAT+GGG - chr4.2:46993343-46993362 None:intergenic 30.0%
AAGATCCAAACAGGTAAAAA+AGG - chr4.2:46992463-46992482 None:intergenic 30.0%
AATGTGTTATGGTTATTGAG+AGG + chr4.2:46989399-46989418 MS.gene049742:intron 30.0%
AATTTCATTTGAATTGGCTG+GGG - chr4.2:46992524-46992543 None:intergenic 30.0%
ACCAACTATAATATTTGGAG+CGG + chr4.2:46993013-46993032 MS.gene049742:CDS 30.0%
ACTCATACACAAAACACATT+GGG + chr4.2:46993679-46993698 MS.gene049742:intron 30.0%
AGAAACAAAACATCCTCAAA+AGG + chr4.2:46993267-46993286 MS.gene049742:CDS 30.0%
AGATAAATTGGAATGAGAAC+AGG - chr4.2:46994124-46994143 None:intergenic 30.0%
AGTAAGTTACAATTGTGAGT+TGG + chr4.2:46989661-46989680 MS.gene049742:intron 30.0%
AGTGCCTTGTAGATAAAATA+AGG + chr4.2:46993847-46993866 MS.gene049742:intron 30.0%
ATAAACCTATGTATACCGTT+GGG - chr4.2:46991907-46991926 None:intergenic 30.0%
ATACGTGTAACACAAGTTAT+TGG - chr4.2:46994438-46994457 None:intergenic 30.0%
CAACTTTGTCTATGTTGAAA+CGG - chr4.2:46991820-46991839 None:intergenic 30.0%
CAATGTGATATGAAATTGAG+AGG + chr4.2:46989916-46989935 MS.gene049742:intron 30.0%
CAATTTCATTTGAATTGGCT+GGG - chr4.2:46992525-46992544 None:intergenic 30.0%
CAGATAAAAATCAAATTCCC+TGG - chr4.2:46994212-46994231 None:intergenic 30.0%
CTTAATAGTACAAACCAGAA+AGG + chr4.2:46992586-46992605 MS.gene049742:CDS 30.0%
GAAAAACGAAGACATTCAAA+TGG - chr4.2:46994337-46994356 None:intergenic 30.0%
GAAACAAAACATCCTCAAAA+GGG + chr4.2:46993268-46993287 MS.gene049742:CDS 30.0%
GAAATGAAGAAAAATAGCCT+TGG - chr4.2:46990990-46991009 None:intergenic 30.0%
GAACATTTCAATGAGAGATA+CGG + chr4.2:46991414-46991433 MS.gene049742:CDS 30.0%
GAACTTAAATGCAAGTGTTT+GGG + chr4.2:46989594-46989613 MS.gene049742:intron 30.0%
GACATGAACTACTTATAACT+TGG + chr4.2:46990943-46990962 MS.gene049742:intron 30.0%
GGTAAAAAAGGTTGTCAAAA+TGG - chr4.2:46992451-46992470 None:intergenic 30.0%
GTGAGTTTGGTATCAATATA+AGG + chr4.2:46991843-46991862 MS.gene049742:CDS 30.0%
GTTAAAATAAAGCTTAGCCA+AGG - chr4.2:46991300-46991319 None:intergenic 30.0%
TAATGTTGCTACATTTCAGA+TGG - chr4.2:46990444-46990463 None:intergenic 30.0%
TAGATTCTTTCCTATGACAA+TGG + chr4.2:46992227-46992246 MS.gene049742:intron 30.0%
TAGCAATCGCATAAAAACAT+TGG - chr4.2:46992894-46992913 None:intergenic 30.0%
TATAAACCTATGTATACCGT+TGG - chr4.2:46991908-46991927 None:intergenic 30.0%
TATTTGATCTATAGAAAGCC+AGG - chr4.2:46993390-46993409 None:intergenic 30.0%
TCAATTTCATTTGAATTGGC+TGG - chr4.2:46992526-46992545 None:intergenic 30.0%
TGAACTTAAATGCAAGTGTT+TGG + chr4.2:46989593-46989612 MS.gene049742:intron 30.0%
TGGAGTAAAGAAAAATGCAA+GGG - chr4.2:46989714-46989733 None:intergenic 30.0%
TTCTATACGTCTATGTATTG+AGG + chr4.2:46991522-46991541 MS.gene049742:intron 30.0%
TTGGAGTAAAGAAAAATGCA+AGG - chr4.2:46989715-46989734 None:intergenic 30.0%
! AACAACACATGATAATGAGT+TGG - chr4.2:46994374-46994393 None:intergenic 30.0%
! AATTAAGTTAGCTTCGGAAA+CGG + chr4.2:46990326-46990345 MS.gene049742:CDS 30.0%
! ACAACCACAAAAGTAACTTT+TGG - chr4.2:46993990-46994009 None:intergenic 30.0%
! AGTTGGTTTATCAGTTACTA+GGG - chr4.2:46993000-46993019 None:intergenic 30.0%
! GAAGGTTTTTGTGATTAACT+TGG + chr4.2:46990120-46990139 MS.gene049742:CDS 30.0%
! GGTTACAATTAAGTTAGCTT+CGG + chr4.2:46990320-46990339 MS.gene049742:CDS 30.0%
! GTAATTTTGCCTGATTTCAA+GGG + chr4.2:46992628-46992647 MS.gene049742:CDS 30.0%
! TAATTTTGCCTGATTTCAAG+GGG + chr4.2:46992629-46992648 MS.gene049742:CDS 30.0%
! TAGTTGGTTTATCAGTTACT+AGG - chr4.2:46993001-46993020 None:intergenic 30.0%
! TGTAATTTTGCCTGATTTCA+AGG + chr4.2:46992627-46992646 MS.gene049742:CDS 30.0%
!! ACTCATTTTTCTCCATCTTT+AGG + chr4.2:46989199-46989218 MS.gene049742:intron 30.0%
!! ATACTTTACTTTTGTGCTTG+TGG + chr4.2:46992110-46992129 MS.gene049742:intron 30.0%
!! CATATTTTACAGGTTGGATT+TGG + chr4.2:46993432-46993451 MS.gene049742:intron 30.0%
!! CATTTAGTTCTTGATTGTCT+AGG + chr4.2:46992926-46992945 MS.gene049742:intron 30.0%
!! GGCTTTAAAGATTAATGTGA+AGG + chr4.2:46992839-46992858 MS.gene049742:CDS 30.0%
!! TTGAATGTCTTCGTTTTTCA+GGG + chr4.2:46994338-46994357 MS.gene049742:intron 30.0%
!! TTTCACTTTTCAGTTATGCA+AGG + chr4.2:46994535-46994554 MS.gene049742:intron 30.0%
!! TTTGAATGTCTTCGTTTTTC+AGG + chr4.2:46994337-46994356 MS.gene049742:intron 30.0%
!!! TCTACCAAAAGTTACTTTTG+TGG + chr4.2:46993983-46994002 MS.gene049742:CDS 30.0%
!!! TTCACGCTTTTTCCTTAAAT+CGG - chr4.2:46990245-46990264 None:intergenic 30.0%
AAAAATCAAATTCCCTGGGA+TGG - chr4.2:46994207-46994226 None:intergenic 35.0%
AAAACACCACAACAGATTTG+AGG - chr4.2:46991580-46991599 None:intergenic 35.0%
AAAAGTGGAAACATAATGCC+AGG + chr4.2:46994062-46994081 MS.gene049742:CDS 35.0%
AAAATAAAGCTTAGCCAAGG+AGG - chr4.2:46991297-46991316 None:intergenic 35.0%
AAAGGCTACTTATTTGCTTG+AGG + chr4.2:46991260-46991279 MS.gene049742:intron 35.0%
AAATCAGTTGTCTCAACATG+GGG - chr4.2:46993342-46993361 None:intergenic 35.0%
AAGGCTACTTATTTGCTTGA+GGG + chr4.2:46991261-46991280 MS.gene049742:intron 35.0%
AAGGCTATTATCAAAGCCTT+AGG + chr4.2:46990618-46990637 MS.gene049742:CDS 35.0%
AATATCACTTTCCCTCTGAT+GGG - chr4.2:46991699-46991718 None:intergenic 35.0%
AATTTCTTCCCGTTGAATCT+GGG - chr4.2:46993230-46993249 None:intergenic 35.0%
ACAAAAACCTTCGACGTAAA+GGG - chr4.2:46990112-46990131 None:intergenic 35.0%
ACAAAGTCAGTCACACAAAT+TGG - chr4.2:46990793-46990812 None:intergenic 35.0%
ACCTCCATTGGAAAATACAT+AGG - chr4.2:46991495-46991514 None:intergenic 35.0%
ACTTGAAAAGAAGCTTGCAT+TGG + chr4.2:46988744-46988763 MS.gene049742:CDS 35.0%
AGAGCTTGTATGGTTTCATA+AGG - chr4.2:46990399-46990418 None:intergenic 35.0%
ATAGTACAAACCAGAAAGGA+AGG + chr4.2:46992590-46992609 MS.gene049742:CDS 35.0%
ATATTCCATTGTCCCATCAT+GGG - chr4.2:46992027-46992046 None:intergenic 35.0%
ATTAGACCTCAAATCTGTTG+TGG + chr4.2:46991571-46991590 MS.gene049742:intron 35.0%
CAAACAACATACTATTCCCT+TGG - chr4.2:46992391-46992410 None:intergenic 35.0%
CACTCATACACAAAACACAT+TGG + chr4.2:46993678-46993697 MS.gene049742:intron 35.0%
CATATATCAGATATCCACTG+AGG + chr4.2:46993736-46993755 MS.gene049742:intron 35.0%
CATGTCACATTGTTAATCAC+TGG - chr4.2:46989878-46989897 None:intergenic 35.0%
CTCAGTGGATATCTGATATA+TGG - chr4.2:46993738-46993757 None:intergenic 35.0%
CTCTGCGTGTTGAATTATAA+AGG + chr4.2:46993150-46993169 MS.gene049742:intron 35.0%
CTGATATATGGACGTATGTT+AGG - chr4.2:46993726-46993745 None:intergenic 35.0%
CTGTAAAATATGATCCTCTC+AGG - chr4.2:46993424-46993443 None:intergenic 35.0%
CTTAAGGTAAGATTCTCTCA+CGG + chr4.2:46991098-46991117 MS.gene049742:CDS 35.0%
GCAATTTACTCCAACATCTA+AGG - chr4.2:46991220-46991239 None:intergenic 35.0%
GGAACATGCAGATTATTTAC+TGG - chr4.2:46992873-46992892 None:intergenic 35.0%
GGTTCAATCTAGAAAAGCTA+AGG - chr4.2:46992329-46992348 None:intergenic 35.0%
GTATGTACTAGTTGCTCAAA+TGG + chr4.2:46994288-46994307 MS.gene049742:intron 35.0%
GTGTTGAATTATAAAGGTGG+TGG + chr4.2:46993156-46993175 MS.gene049742:intron 35.0%
GTTAATATGTGTCAAGCCAA+GGG + chr4.2:46992372-46992391 MS.gene049742:CDS 35.0%
GTTTGGTATCAATATAAGGG+AGG + chr4.2:46991847-46991866 MS.gene049742:CDS 35.0%
TAAACCTATGTATACCGTTG+GGG - chr4.2:46991906-46991925 None:intergenic 35.0%
TAACTAACGTCTCATACTCT+TGG - chr4.2:46991023-46991042 None:intergenic 35.0%
TAATATCACTTTCCCTCTGA+TGG - chr4.2:46991700-46991719 None:intergenic 35.0%
TAATTTCTTCCCGTTGAATC+TGG - chr4.2:46993231-46993250 None:intergenic 35.0%
TACTTATTTGCTTGAGGGAA+AGG + chr4.2:46991266-46991285 MS.gene049742:intron 35.0%
TAGAAGAGAAAAACCTCCAT+TGG - chr4.2:46991507-46991526 None:intergenic 35.0%
TAGTTCTTGATTGTCTAGGT+TGG + chr4.2:46992930-46992949 MS.gene049742:intron 35.0%
TATAACTGCATCATTCAGCA+CGG - chr4.2:46992967-46992986 None:intergenic 35.0%
TCAAAAATTGACCCCATGAT+GGG + chr4.2:46992012-46992031 MS.gene049742:CDS 35.0%
TCATCAAGCATGAACCTTAA+TGG - chr4.2:46991369-46991388 None:intergenic 35.0%
TCCGCTCCAAATATTATAGT+TGG - chr4.2:46993017-46993036 None:intergenic 35.0%
TCTGATCAGACAGATAAAAG+TGG + chr4.2:46994047-46994066 MS.gene049742:CDS 35.0%
TGAAATTGTCAAAGGAACTG+TGG + chr4.2:46994165-46994184 MS.gene049742:intron 35.0%
TGCGTGTTGAATTATAAAGG+TGG + chr4.2:46993153-46993172 MS.gene049742:intron 35.0%
TGTATGAGATGGATGCAATT+TGG + chr4.2:46993583-46993602 MS.gene049742:CDS 35.0%
TGTTTCAGATGTTTCTTCGA+GGG + chr4.2:46990756-46990775 MS.gene049742:intron 35.0%
TTGTAGAAAGTGGTTAATGG+TGG + chr4.2:46992282-46992301 MS.gene049742:intron 35.0%
TTGTGTATGAGTGTATGAGT+TGG - chr4.2:46993671-46993690 None:intergenic 35.0%
TTGTTTCAGATGTTTCTTCG+AGG + chr4.2:46990755-46990774 MS.gene049742:intron 35.0%
TTTAGTGCAGATCAGTTACA+GGG + chr4.2:46994407-46994426 MS.gene049742:CDS 35.0%
! CTGAGAGGATCATATTTTAC+AGG + chr4.2:46993422-46993441 MS.gene049742:CDS 35.0%
! GAGGATCATATTTTACAGGT+TGG + chr4.2:46993426-46993445 MS.gene049742:intron 35.0%
! GTCATAAGAGAAAAGTTGGT+TGG + chr4.2:46989042-46989061 MS.gene049742:intron 35.0%
! GTTGGTTTATCAGTTACTAG+GGG - chr4.2:46992999-46993018 None:intergenic 35.0%
! TGCTTGATGACAAAGTAACT+CGG + chr4.2:46991379-46991398 MS.gene049742:CDS 35.0%
! TTGACGTTTTCCATGATTGA+GGG - chr4.2:46994799-46994818 None:intergenic 35.0%
! TTGCTCTTCGTTCAATCTTT+TGG - chr4.2:46991642-46991661 None:intergenic 35.0%
! TTTGACGTTTTCCATGATTG+AGG - chr4.2:46994800-46994819 None:intergenic 35.0%
!! AACTTGGTTGATGAGAACAA+AGG + chr4.2:46990136-46990155 MS.gene049742:CDS 35.0%
!! GAATTTTTCAATTCGGTCTC+AGG + chr4.2:46993935-46993954 MS.gene049742:intron 35.0%
!! TCAGTTGGTGAAAATGCATA+AGG + chr4.2:46990018-46990037 MS.gene049742:CDS 35.0%
!! TCATACTCTTGGTGTCATAA+AGG - chr4.2:46991012-46991031 None:intergenic 35.0%
!! TCATTTTTCTCTCCCAGTTT+GGG + chr4.2:46990557-46990576 MS.gene049742:CDS 35.0%
!! TGAATGTCTTCGTTTTTCAG+GGG + chr4.2:46994339-46994358 MS.gene049742:intron 35.0%
!!! CTGATCGTGTTTTAATGTTC+AGG + chr4.2:46990490-46990509 MS.gene049742:intron 35.0%
!!! GACAACCTTTTTTACCTGTT+TGG + chr4.2:46992455-46992474 MS.gene049742:intron 35.0%
!!! TTTTCAGGTATACTGTTGCA+GGG + chr4.2:46990531-46990550 MS.gene049742:intron 35.0%
!!! TTTTTCAGGTATACTGTTGC+AGG + chr4.2:46990530-46990549 MS.gene049742:intron 35.0%
AAACCTATGTATACCGTTGG+GGG - chr4.2:46991905-46991924 None:intergenic 40.0%
AAAGAAGCTTGCATTGGAGA+CGG + chr4.2:46988750-46988769 MS.gene049742:CDS 40.0%
AACTCCGCACAAAATTGAGT+TGG - chr4.2:46992351-46992370 None:intergenic 40.0%
AAGCTCTTGACATTGCTTTG+CGG + chr4.2:46990412-46990431 MS.gene049742:CDS 40.0%
AAGCTTACTGCAGCTATAGA+AGG - chr4.2:46993074-46993093 None:intergenic 40.0%
AAGGATCTCTGTTGAAATGC+TGG - chr4.2:46992489-46992508 None:intergenic 40.0%
AATAGGATTCCTGCCTATGA+TGG + chr4.2:46990055-46990074 MS.gene049742:CDS 40.0%
AATGCATAAGGAGTCCCTAT+TGG + chr4.2:46990030-46990049 MS.gene049742:CDS 40.0%
ACAAAACACATTGGGTCATG+CGG + chr4.2:46993687-46993706 MS.gene049742:intron 40.0%
ACTCCGCACAAAATTGAGTT+GGG - chr4.2:46992350-46992369 None:intergenic 40.0%
ACTTTCTTCGATGCAATCTC+GGG - chr4.2:46989980-46989999 None:intergenic 40.0%
AGCAATGTCAAGAGCTTGTA+TGG - chr4.2:46990409-46990428 None:intergenic 40.0%
AGGAATCCTATTCCCCAATA+GGG - chr4.2:46990047-46990066 None:intergenic 40.0%
AGGGATCATAAGGAGTTACA+AGG + chr4.2:46991121-46991140 MS.gene049742:CDS 40.0%
ATAAGGAGTTACAAGGTGAC+CGG + chr4.2:46991128-46991147 MS.gene049742:CDS 40.0%
ATAATAAACGGAAGCCTGAG+AGG + chr4.2:46993407-46993426 MS.gene049742:CDS 40.0%
ATAGGATTCCTGCCTATGAT+GGG + chr4.2:46990056-46990075 MS.gene049742:CDS 40.0%
ATATCACTTTCCCTCTGATG+GGG - chr4.2:46991698-46991717 None:intergenic 40.0%
ATATCAGATATCCACTGAGG+AGG + chr4.2:46993739-46993758 MS.gene049742:intron 40.0%
ATCAGAGATGGAGTAAGTGA+AGG + chr4.2:46993540-46993559 MS.gene049742:intron 40.0%
ATCTGTCTGATCAGAACTGA+CGG - chr4.2:46994042-46994061 None:intergenic 40.0%
ATGCATAAGGAGTCCCTATT+GGG + chr4.2:46990031-46990050 MS.gene049742:CDS 40.0%
ATGGGATTGTCCCTCAATAT+TGG + chr4.2:46990650-46990669 MS.gene049742:CDS 40.0%
ATGTTAATTGACCTCCTCAG+TGG - chr4.2:46993753-46993772 None:intergenic 40.0%
CAAATGGAAACAGCACAGAT+TGG - chr4.2:46994321-46994340 None:intergenic 40.0%
CACAAAAACCTTCGACGTAA+AGG - chr4.2:46990113-46990132 None:intergenic 40.0%
CACGTGAGTTCGTTGTAAAT+CGG + chr4.2:46990177-46990196 MS.gene049742:intron 40.0%
CACTTTCTTCGATGCAATCT+CGG - chr4.2:46989981-46990000 None:intergenic 40.0%
CAGGGATGTTATCAATCAGT+TGG + chr4.2:46990003-46990022 MS.gene049742:CDS 40.0%
CATATTCCATTGTCCCATCA+TGG - chr4.2:46992028-46992047 None:intergenic 40.0%
CATTACCTTATCATTCCACC+AGG - chr4.2:46993301-46993320 None:intergenic 40.0%
CTGGTGGAATGATAAGGTAA+TGG + chr4.2:46993299-46993318 MS.gene049742:intron 40.0%
CTTTAGTGCAGATCAGTTAC+AGG + chr4.2:46994406-46994425 MS.gene049742:CDS 40.0%
GACAAAGTTGTGTGTGAGTT+TGG + chr4.2:46991830-46991849 MS.gene049742:CDS 40.0%
GACTTGCACATGGAAATGAT+TGG - chr4.2:46988869-46988888 None:intergenic 40.0%
GATGTGGAAAATCCTGATTC+CGG + chr4.2:46994727-46994746 MS.gene049742:CDS 40.0%
GCATTTCAACAGAGATCCTT+TGG + chr4.2:46992489-46992508 MS.gene049742:intron 40.0%
GGTTAATATGTGTCAAGCCA+AGG + chr4.2:46992371-46992390 MS.gene049742:CDS 40.0%
GTATTACTTGAATCCCAGCA+TGG - chr4.2:46994240-46994259 None:intergenic 40.0%
GTCAAAAATTGACCCCATGA+TGG + chr4.2:46992011-46992030 MS.gene049742:CDS 40.0%
TAAAACCTCCCCTTGAAATC+AGG - chr4.2:46992640-46992659 None:intergenic 40.0%
TATTCCATTGTCCCATCATG+GGG - chr4.2:46992026-46992045 None:intergenic 40.0%
TCAGAGATGGAGTAAGTGAA+GGG + chr4.2:46993541-46993560 MS.gene049742:intron 40.0%
TCTTACCTTAAGACCTCTCA+AGG - chr4.2:46991090-46991109 None:intergenic 40.0%
TGAATTCGACAAGAACTGCA+AGG + chr4.2:46992558-46992577 MS.gene049742:CDS 40.0%
TGAGATGGATGCAATTTGGA+AGG + chr4.2:46993587-46993606 MS.gene049742:CDS 40.0%
TGGATGCAATTTGGAAGGTA+TGG + chr4.2:46993592-46993611 MS.gene049742:intron 40.0%
TTATGCAAGGTGTACTCGAT+CGG + chr4.2:46994548-46994567 MS.gene049742:CDS 40.0%
TTCTGACTGCAGCTCAAATA+TGG + chr4.2:46991982-46992001 MS.gene049742:intron 40.0%
TTTATCTGAACAGCCATGCT+GGG + chr4.2:46994224-46994243 MS.gene049742:CDS 40.0%
! AACTCAATTTTGTGCGGAGT+TGG + chr4.2:46992350-46992369 MS.gene049742:CDS 40.0%
! ATTTTTCTCTCCCAGTTTGG+GGG + chr4.2:46990559-46990578 MS.gene049742:CDS 40.0%
! CAACTGATTGATAACATCCC+TGG - chr4.2:46990005-46990024 None:intergenic 40.0%
! CATTTTTCTCTCCCAGTTTG+GGG + chr4.2:46990558-46990577 MS.gene049742:CDS 40.0%
! CGCTGATGTTGATGAAGAAA+CGG - chr4.2:46988605-46988624 None:intergenic 40.0%
! GAACCCAACTCAATTTTGTG+CGG + chr4.2:46992344-46992363 MS.gene049742:CDS 40.0%
! GAGGCCTATGTATTTTCCAA+TGG + chr4.2:46991488-46991507 MS.gene049742:CDS 40.0%
! GATTTCAAGGGGAGGTTTTA+TGG + chr4.2:46992640-46992659 MS.gene049742:CDS 40.0%
! GCCTATGTATTTTCCAATGG+AGG + chr4.2:46991491-46991510 MS.gene049742:CDS 40.0%
! TTCTTGATTGTCTAGGTTGG+TGG + chr4.2:46992933-46992952 MS.gene049742:intron 40.0%
! TTTTATCTGAACAGCCATGC+TGG + chr4.2:46994223-46994242 MS.gene049742:CDS 40.0%
! TTTTGTGCTTGTGGAGCTTT+TGG + chr4.2:46992119-46992138 MS.gene049742:intron 40.0%
!! AAACAGCAAGAGCATTTCTG+TGG - chr4.2:46993798-46993817 None:intergenic 40.0%
!! AATTTTCAGGGAGTTACTCC+TGG + chr4.2:46993369-46993388 MS.gene049742:intron 40.0%
!! TAGCTTTGTCAAATTGAGCC+TGG + chr4.2:46991605-46991624 MS.gene049742:intron 40.0%
!! TCAGGTTTTGCTGTATGAGA+TGG + chr4.2:46993572-46993591 MS.gene049742:CDS 40.0%
!!! GTCATTTTTCTCTCCCAGTT+TGG + chr4.2:46990556-46990575 MS.gene049742:CDS 40.0%
AAAGCGTGAACGCGAGTTTA+AGG + chr4.2:46990299-46990318 MS.gene049742:CDS 45.0%
AAATTCCCTGGGATGGCAAA+TGG - chr4.2:46994200-46994219 None:intergenic 45.0%
AACAAGTGGGCATAATACGC+AGG - chr4.2:46994679-46994698 None:intergenic 45.0%
AAGGTAAGATTCTCTCACGG+AGG + chr4.2:46991101-46991120 MS.gene049742:CDS 45.0%
AAGTGAAGGGCAGTTTAGTC+AGG + chr4.2:46993554-46993573 MS.gene049742:CDS 45.0%
ACCTTCGACGTAAAGGGTAA+TGG - chr4.2:46990106-46990125 None:intergenic 45.0%
AGAACTGACGGGAAAGAATC+GGG - chr4.2:46994030-46994049 None:intergenic 45.0%
AGCTCTTGACATTGCTTTGC+GGG + chr4.2:46990413-46990432 MS.gene049742:CDS 45.0%
AGGAAGAGTCTGTATACTGC+TGG + chr4.2:46990079-46990098 MS.gene049742:CDS 45.0%
AGGTAAGATTCTCTCACGGA+GGG + chr4.2:46991102-46991121 MS.gene049742:CDS 45.0%
AGTTGGAGTGGAAGATGGAA+CGG - chr4.2:46988569-46988588 None:intergenic 45.0%
CAAAACACATTGGGTCATGC+GGG + chr4.2:46993688-46993707 MS.gene049742:intron 45.0%
CAGAACTGACGGGAAAGAAT+CGG - chr4.2:46994031-46994050 None:intergenic 45.0%
CAGGAATCCTATTCCCCAAT+AGG - chr4.2:46990048-46990067 None:intergenic 45.0%
GAAAGCCTTGAGAGGTCTTA+AGG + chr4.2:46991082-46991101 MS.gene049742:CDS 45.0%
GAAAGTGGTTAATGGTGGCA+AGG + chr4.2:46992287-46992306 MS.gene049742:intron 45.0%
GAAGAAACGGTGACTGTAAC+CGG - chr4.2:46988592-46988611 None:intergenic 45.0%
GAAGATTGTTGAGAAGTCGC+CGG - chr4.2:46988478-46988497 None:intergenic 45.0%
GAGAACAAAGGATCCTCTTC+TGG + chr4.2:46990148-46990167 MS.gene049742:CDS 45.0%
GAGAACAGGTACCAGTTGTA+GGG - chr4.2:46994110-46994129 None:intergenic 45.0%
GGTGGGACAGAATATTGGAA+AGG + chr4.2:46990599-46990618 MS.gene049742:CDS 45.0%
GTCAAATTGAGCCTGGACAA+AGG + chr4.2:46991612-46991631 MS.gene049742:CDS 45.0%
GTCTGATCAAGATCGTGTCA+AGG + chr4.2:46990849-46990868 MS.gene049742:CDS 45.0%
TAGATACCCCTCCTCAAATG+AGG - chr4.2:46993967-46993986 None:intergenic 45.0%
TCATTCATCTGTCGTAGCAC+CGG + chr4.2:46988636-46988655 MS.gene049742:CDS 45.0%
TCCATTACCCTTTACGTCGA+AGG + chr4.2:46990102-46990121 MS.gene049742:CDS 45.0%
TCGCTGCTACATTAGTGATG+TGG + chr4.2:46994711-46994730 MS.gene049742:CDS 45.0%
TCTGTCTGATCAGAACTGAC+GGG - chr4.2:46994041-46994060 None:intergenic 45.0%
TGAAACCGAACTCGAACTAG+CGG - chr4.2:46988665-46988684 None:intergenic 45.0%
TGACTGCAGCTCAAATATGG+TGG + chr4.2:46991985-46992004 MS.gene049742:intron 45.0%
TGAGAACAGGTACCAGTTGT+AGG - chr4.2:46994111-46994130 None:intergenic 45.0%
TGCATAAGGAGTCCCTATTG+GGG + chr4.2:46990032-46990051 MS.gene049742:CDS 45.0%
TGCTGGTACAAGATCCAAAC+AGG - chr4.2:46992472-46992491 None:intergenic 45.0%
TGGTTTCTGCCCAGATTCAA+CGG + chr4.2:46993218-46993237 MS.gene049742:CDS 45.0%
TTCTTCATCAACATCAGCGC+CGG + chr4.2:46988606-46988625 MS.gene049742:CDS 45.0%
TTGAGTCTTCTCCTGGATGA+GGG - chr4.2:46993049-46993068 None:intergenic 45.0%
TTTCTTGCCTTCCCTACAAC+TGG + chr4.2:46994096-46994115 MS.gene049742:intron 45.0%
TTTGAATTGGCTGGGGCTAT+AGG - chr4.2:46992517-46992536 None:intergenic 45.0%
! ATCGGGTGTGATGTCTCTTT+TGG - chr4.2:46994013-46994032 None:intergenic 45.0%
! ATGGTGGCAAGGTGGAATTT+TGG + chr4.2:46992298-46992317 MS.gene049742:CDS 45.0%
! TATAAAGGTGGTGGCATCCA+TGG + chr4.2:46993165-46993184 MS.gene049742:intron 45.0%
! TCGTGTCAAGGTATTCGTGA+TGG + chr4.2:46990861-46990880 MS.gene049742:intron 45.0%
! TTTTGCCTGATTTCAAGGGG+AGG + chr4.2:46992632-46992651 MS.gene049742:CDS 45.0%
!! TGCATCGAAGAAAGTGTCCA+GGG + chr4.2:46989985-46990004 MS.gene049742:CDS 45.0%
!! TGTACTCGATCGGTGTCAAT+AGG + chr4.2:46994558-46994577 MS.gene049742:CDS 45.0%
!! TTCATCTTTGCCGCTTTCCT+TGG - chr4.2:46992798-46992817 None:intergenic 45.0%
!! TTGCATCGAAGAAAGTGTCC+AGG + chr4.2:46989984-46990003 MS.gene049742:CDS 45.0%
!!! CTTTTGGAGTACCTTTGTCC+AGG - chr4.2:46991626-46991645 None:intergenic 45.0%
!!! TTTTATTTTATTTTTGTTTT+CGG + chr4.2:46993631-46993650 MS.gene049742:intron 5.0%
AAGCCTTAGGCCAACACAGA+TGG + chr4.2:46990631-46990650 MS.gene049742:CDS 50.0%
AAGTGGGCATAATACGCAGG+AGG - chr4.2:46994676-46994695 None:intergenic 50.0%
ACACAACCATTTGCCATCCC+AGG + chr4.2:46994191-46994210 MS.gene049742:CDS 50.0%
ACAGGTACCAGTTGTAGGGA+AGG - chr4.2:46994106-46994125 None:intergenic 50.0%
ACAGTTGCAGCCTTCCTTTC+TGG - chr4.2:46992603-46992622 None:intergenic 50.0%
ACTAATGTAGCAGCGAGCTC+GGG - chr4.2:46994707-46994726 None:intergenic 50.0%
ACTCACGTTAGGTCTCTGAG+TGG - chr4.2:46991167-46991186 None:intergenic 50.0%
AGCCTTAGGCCAACACAGAT+GGG + chr4.2:46990632-46990651 MS.gene049742:CDS 50.0%
AGCTCGGGAAGCTAACAAGT+GGG - chr4.2:46994692-46994711 None:intergenic 50.0%
AGGAGTCCCTATTGGGGAAT+AGG + chr4.2:46990038-46990057 MS.gene049742:CDS 50.0%
AGGGACAATCCCATCTGTGT+TGG - chr4.2:46990644-46990663 None:intergenic 50.0%
AGTGGTTAATGGTGGCAAGG+TGG + chr4.2:46992290-46992309 MS.gene049742:CDS 50.0%
ATGTTGCGAGCCAAGGAAAG+CGG + chr4.2:46992785-46992804 MS.gene049742:CDS 50.0%
CAACTTGACCGAAACCAGGA+CGG - chr4.2:46988825-46988844 None:intergenic 50.0%
CACAACCATTTGCCATCCCA+GGG + chr4.2:46994192-46994211 MS.gene049742:CDS 50.0%
CACTAATGTAGCAGCGAGCT+CGG - chr4.2:46994708-46994727 None:intergenic 50.0%
CAGACTCTTCCTCCCATCAT+AGG - chr4.2:46990071-46990090 None:intergenic 50.0%
CAGATCACGAAAGCCTTGAG+AGG + chr4.2:46991074-46991093 MS.gene049742:intron 50.0%
CCTGTTACCACTTGCAGAAC+CGG - chr4.2:46994749-46994768 None:intergenic 50.0%
CCTTGCGTCACAAAGTACAG+GGG + chr4.2:46993193-46993212 MS.gene049742:CDS 50.0%
CGTCACAAAGTACAGGGGAA+TGG + chr4.2:46993198-46993217 MS.gene049742:CDS 50.0%
CTGTGCCTGGTGGAATGATA+AGG + chr4.2:46993293-46993312 MS.gene049742:CDS 50.0%
CTTCCAACTTGACCGAAACC+AGG - chr4.2:46988829-46988848 None:intergenic 50.0%
CTTGAGTCTTCTCCTGGATG+AGG - chr4.2:46993050-46993069 None:intergenic 50.0%
CTTGTGCCTCATTTGAGGAG+GGG + chr4.2:46993958-46993977 MS.gene049742:CDS 50.0%
GAAGGACTTGAGTCTTCTCC+TGG - chr4.2:46993056-46993075 None:intergenic 50.0%
GACAATCCAGCTGCAAACGA+CGG - chr4.2:46990377-46990396 None:intergenic 50.0%
GACGGAGAAACTGAGCAAGA+TGG - chr4.2:46990359-46990378 None:intergenic 50.0%
GATGTAACACACCCTCATCC+AGG + chr4.2:46993035-46993054 MS.gene049742:CDS 50.0%
GCCTTGCGTCACAAAGTACA+GGG + chr4.2:46993192-46993211 MS.gene049742:CDS 50.0%
GCTTCCGTCAAAACCTTCGT+CGG - chr4.2:46988712-46988731 None:intergenic 50.0%
GCTTGTGCCTCATTTGAGGA+GGG + chr4.2:46993957-46993976 MS.gene049742:CDS 50.0%
GGTTTCTGCCCAGATTCAAC+GGG + chr4.2:46993219-46993238 MS.gene049742:CDS 50.0%
TATCAGCAGCGACTTGCACA+TGG - chr4.2:46988879-46988898 None:intergenic 50.0%
TCACGTGTCAGAACCAGAAG+AGG - chr4.2:46990164-46990183 None:intergenic 50.0%
TCAGGCTTGTGCCTCATTTG+AGG + chr4.2:46993953-46993972 MS.gene049742:intron 50.0%
TCAGGTATACTGTTGCAGGG+AGG + chr4.2:46990534-46990553 MS.gene049742:intron 50.0%
TCCATCTTCCACTCCAACTC+CGG + chr4.2:46988570-46988589 MS.gene049742:CDS 50.0%
TCGCCGTAACCAACTTTCTC+CGG + chr4.2:46988456-46988475 MS.gene049742:CDS 50.0%
TCTCTCACGGAGGGATCATA+AGG + chr4.2:46991111-46991130 MS.gene049742:CDS 50.0%
TCTGTGGTCACTATGTTCCG+TGG - chr4.2:46993782-46993801 None:intergenic 50.0%
TGACTCAATGTTGCGAGCCA+AGG + chr4.2:46992778-46992797 MS.gene049742:CDS 50.0%
TTGGCGGTGGGACAGAATAT+TGG + chr4.2:46990594-46990613 MS.gene049742:CDS 50.0%
! AGGGAAAGGTGTATCCTCCT+TGG + chr4.2:46991280-46991299 MS.gene049742:intron 50.0%
! ATCCCATCTGTGTTGGCCTA+AGG - chr4.2:46990637-46990656 None:intergenic 50.0%
! TCGCCGGAGAAAGTTGGTTA+CGG - chr4.2:46988462-46988481 None:intergenic 50.0%
! TTGACCCCATGATGGGACAA+TGG + chr4.2:46992019-46992038 MS.gene049742:CDS 50.0%
! TTGTTTTCGGAAGGGGCTAG+TGG + chr4.2:46993644-46993663 MS.gene049742:intron 50.0%
!! CTGGTTTCGGTCAAGTTGGA+AGG + chr4.2:46988827-46988846 MS.gene049742:CDS 50.0%
!! CTTATCGCCTTCTGAGACGA+CGG - chr4.2:46988793-46988812 None:intergenic 50.0%
!!! GAGTGGCTCTTTTGAGACAC+CGG - chr4.2:46991150-46991169 None:intergenic 50.0%
AACGGTGGTCGTGGTTCACA+CGG + chr4.2:46988535-46988554 MS.gene049742:CDS 55.0%
ACCGGAGTTGGAGTGGAAGA+TGG - chr4.2:46988574-46988593 None:intergenic 55.0%
ACGGTGACTGTAACCGGAGT+TGG - chr4.2:46988586-46988605 None:intergenic 55.0%
ATAAGGTTCCCTGACCGTCC+TGG + chr4.2:46988808-46988827 MS.gene049742:CDS 55.0%
CAAAAGGGAACTGTGCCTGG+TGG + chr4.2:46993283-46993302 MS.gene049742:CDS 55.0%
CAGTGCTGCAACAGAGTTGG+GGG - chr4.2:46994776-46994795 None:intergenic 55.0%
CCACTTGCAGAACCGGAATC+AGG - chr4.2:46994742-46994761 None:intergenic 55.0%
CCCCTGTACTTTGTGACGCA+AGG - chr4.2:46993196-46993215 None:intergenic 55.0%
CCGGTTCTGCAAGTGGTAAC+AGG + chr4.2:46994746-46994765 MS.gene049742:CDS 55.0%
CCTATGTATACCGTTGGGGG+AGG - chr4.2:46991902-46991921 None:intergenic 55.0%
CCTCAAAAGGGAACTGTGCC+TGG + chr4.2:46993280-46993299 MS.gene049742:CDS 55.0%
CCTCCCCCAACGGTATACAT+AGG + chr4.2:46991899-46991918 MS.gene049742:intron 55.0%
CCTGATTCCGGTTCTGCAAG+TGG + chr4.2:46994739-46994758 MS.gene049742:CDS 55.0%
CGCAGGAGGAACTGCATACA+AGG - chr4.2:46994662-46994681 None:intergenic 55.0%
CGTCCTGGTTTCGGTCAAGT+TGG + chr4.2:46988823-46988842 MS.gene049742:CDS 55.0%
CGTCGTCTCAGAAGGCGATA+AGG + chr4.2:46988791-46988810 MS.gene049742:CDS 55.0%
CTCTTCCTCCCATCATAGGC+AGG - chr4.2:46990067-46990086 None:intergenic 55.0%
GAACTCGAACTAGCGGCAAC+CGG - chr4.2:46988658-46988677 None:intergenic 55.0%
GACTGTAACCGGAGTTGGAG+TGG - chr4.2:46988581-46988600 None:intergenic 55.0%
GAGAAGTCGCCGGAGAAAGT+TGG - chr4.2:46988468-46988487 None:intergenic 55.0%
GAGCTCGGGAAGCTAACAAG+TGG - chr4.2:46994693-46994712 None:intergenic 55.0%
GCAGTGCTGCAACAGAGTTG+GGG - chr4.2:46994777-46994796 None:intergenic 55.0%
GCTGGGGCTATAGGTACCAA+AGG - chr4.2:46992508-46992527 None:intergenic 55.0%
GCTTGCATTGGAGACGGTTC+CGG + chr4.2:46988756-46988775 MS.gene049742:CDS 55.0%
GGCAGTGCTGCAACAGAGTT+GGG - chr4.2:46994778-46994797 None:intergenic 55.0%
GGCCTTGCGTCACAAAGTAC+AGG + chr4.2:46993191-46993210 MS.gene049742:CDS 55.0%
GGCTTGTGCCTCATTTGAGG+AGG + chr4.2:46993956-46993975 MS.gene049742:intron 55.0%
GTTGGTTACGGCGAGGATCA+CGG - chr4.2:46988450-46988469 None:intergenic 55.0%
GTTTCTCCGTCGTTTGCAGC+TGG + chr4.2:46990368-46990387 MS.gene049742:CDS 55.0%
TATTCTGTCCCACCGCCAAG+AGG - chr4.2:46990593-46990612 None:intergenic 55.0%
TCCGTCAAAACCTTCGTCGG+AGG - chr4.2:46988709-46988728 None:intergenic 55.0%
TCCGTCAATGCTCCACGATC+AGG + chr4.2:46988496-46988515 MS.gene049742:CDS 55.0%
TGCAGCACTGCCCTCAATCA+TGG + chr4.2:46994786-46994805 MS.gene049742:CDS 55.0%
TGTGACGCAAGGCCAATCCA+TGG - chr4.2:46993185-46993204 None:intergenic 55.0%
TTCCCTGACCGTCCTGGTTT+CGG + chr4.2:46988814-46988833 MS.gene049742:CDS 55.0%
TTCTGCTCCGTCGTCTCAGA+AGG + chr4.2:46988783-46988802 MS.gene049742:CDS 55.0%
! AGGTGGTGGCATCCATGGAT+TGG + chr4.2:46993170-46993189 MS.gene049742:intron 55.0%
! CCAGGCACAGTTCCCTTTTG+AGG - chr4.2:46993283-46993302 None:intergenic 55.0%
! GGAGAAAGTTGGTTACGGCG+AGG - chr4.2:46988457-46988476 None:intergenic 55.0%
! GGATTCCTGCCTATGATGGG+AGG + chr4.2:46990059-46990078 MS.gene049742:CDS 55.0%
! GGTTGCCGCTAGTTCGAGTT+CGG + chr4.2:46988657-46988676 MS.gene049742:CDS 55.0%
! TCGTGTTTTGCCTCCCCCAA+CGG + chr4.2:46991889-46991908 MS.gene049742:CDS 55.0%
!! CATAGGCCTCGTGTCACTTC+CGG - chr4.2:46991478-46991497 None:intergenic 55.0%
!! GCCTCCGACGAAGGTTTTGA+CGG + chr4.2:46988705-46988724 MS.gene049742:CDS 55.0%
!! GCCTGATCGTGGAGCATTGA+CGG - chr4.2:46988500-46988519 None:intergenic 55.0%
AATGCTCCACGATCAGGCCG+CGG + chr4.2:46988502-46988521 MS.gene049742:CDS 60.0%
ACCTTCGTCGGAGGCAGAGA+CGG - chr4.2:46988700-46988719 None:intergenic 60.0%
ACTGTCAGCGTCCCCATCAG+AGG + chr4.2:46991684-46991703 MS.gene049742:CDS 60.0%
AGGCAGAGACGGAGACGGAA+CGG - chr4.2:46988689-46988708 None:intergenic 60.0%
CTGATGGGGACGCTGACAGT+TGG - chr4.2:46991684-46991703 None:intergenic 60.0%
CTGTCAGCGTCCCCATCAGA+GGG + chr4.2:46991685-46991704 MS.gene049742:CDS 60.0%
CTTCTTCCCGCTCTCCAAGC+CGG + chr4.2:46991456-46991475 MS.gene049742:CDS 60.0%
GACCGAAACCAGGACGGTCA+GGG - chr4.2:46988819-46988838 None:intergenic 60.0%
GCTTGGAGAGCGGGAAGAAG+TGG - chr4.2:46991456-46991475 None:intergenic 60.0%
GGGCAGTGCTGCAACAGAGT+TGG - chr4.2:46994779-46994798 None:intergenic 60.0%
TCCAAGCCGGAAGTGACACG+AGG + chr4.2:46991469-46991488 MS.gene049742:CDS 60.0%
TGACCGAAACCAGGACGGTC+AGG - chr4.2:46988820-46988839 None:intergenic 60.0%
TGCATTGGAGACGGTTCCGG+AGG + chr4.2:46988759-46988778 MS.gene049742:CDS 60.0%
! TCTCCCAGTTTGGGGGCACA+GGG + chr4.2:46990566-46990585 MS.gene049742:CDS 60.0%
!! GTCACTTCCGGCTTGGAGAG+CGG - chr4.2:46991466-46991485 None:intergenic 60.0%
!! TCACTTCCGGCTTGGAGAGC+GGG - chr4.2:46991465-46991484 None:intergenic 60.0%
GACGACGGAGCAGAAGCCTC+CGG - chr4.2:46988778-46988797 None:intergenic 65.0%
GGTGGTCGTAACGGTGGTCG+TGG + chr4.2:46988526-46988545 MS.gene049742:CDS 65.0%
GGTGGTCGTGGTTCACACGG+CGG + chr4.2:46988538-46988557 MS.gene049742:CDS 65.0%
GTCGGAGGCAGAGACGGAGA+CGG - chr4.2:46988694-46988713 None:intergenic 65.0%
TCCGTCTCTGCCTCCGACGA+AGG + chr4.2:46988696-46988715 MS.gene049742:CDS 65.0%
TTACGGCGAGGATCACGGCG+AGG - chr4.2:46988445-46988464 None:intergenic 65.0%
! CTCCCAGTTTGGGGGCACAG+GGG + chr4.2:46990567-46990586 MS.gene049742:CDS 65.0%
! CTCTCCCAGTTTGGGGGCAC+AGG + chr4.2:46990565-46990584 MS.gene049742:CDS 65.0%
!! GCCTCGTGTCACTTCCGGCT+TGG - chr4.2:46991473-46991492 None:intergenic 65.0%
AGGCCCCTGTGCCCCCAAAC+TGG - chr4.2:46990573-46990592 None:intergenic 70.0%
CACAGGGGCCTCTTGGCGGT+GGG + chr4.2:46990582-46990601 MS.gene049742:CDS 70.0%
CACCGTTACGACCACCGCCG+CGG - chr4.2:46988522-46988541 None:intergenic 70.0%
GGCCCCTGTGCCCCCAAACT+GGG - chr4.2:46990572-46990591 None:intergenic 70.0%
! TTGGGGGCACAGGGGCCTCT+TGG + chr4.2:46990575-46990594 MS.gene049742:CDS 70.0%
CGCGGCGGTGGTCGTAACGG+TGG + chr4.2:46988520-46988539 MS.gene049742:CDS 75.0%
GCACAGGGGCCTCTTGGCGG+TGG + chr4.2:46990581-46990600 MS.gene049742:CDS 75.0%
GCTCCACGATCAGGCCGCGG+CGG + chr4.2:46988505-46988524 MS.gene049742:CDS 75.0%
GGCCGCGGCGGTGGTCGTAA+CGG + chr4.2:46988517-46988536 MS.gene049742:CDS 75.0%
GGGGCACAGGGGCCTCTTGG+CGG + chr4.2:46990578-46990597 MS.gene049742:CDS 75.0%
! CCACCGCCGCGGCCTGATCG+TGG - chr4.2:46988511-46988530 None:intergenic 80.0%
! CCACGATCAGGCCGCGGCGG+TGG + chr4.2:46988508-46988527 MS.gene049742:CDS 80.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 46988409 46994840 46988409 ID=MS.gene049742
chr4.2 mRNA 46988409 46994840 46988409 ID=MS.gene049742.t1;Parent=MS.gene049742
chr4.2 exon 46988409 46988918 46988409 ID=MS.gene049742.t1.exon1;Parent=MS.gene049742.t1
chr4.2 CDS 46988409 46988918 46988409 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46989965 46990179 46989965 ID=MS.gene049742.t1.exon2;Parent=MS.gene049742.t1
chr4.2 CDS 46989965 46990179 46989965 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46990296 46990451 46990296 ID=MS.gene049742.t1.exon3;Parent=MS.gene049742.t1
chr4.2 CDS 46990296 46990451 46990296 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46990538 46990671 46990538 ID=MS.gene049742.t1.exon4;Parent=MS.gene049742.t1
chr4.2 CDS 46990538 46990671 46990538 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46990764 46990870 46990764 ID=MS.gene049742.t1.exon5;Parent=MS.gene049742.t1
chr4.2 CDS 46990764 46990870 46990764 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46991077 46991180 46991077 ID=MS.gene049742.t1.exon6;Parent=MS.gene049742.t1
chr4.2 CDS 46991077 46991180 46991077 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46991374 46991512 46991374 ID=MS.gene049742.t1.exon7;Parent=MS.gene049742.t1
chr4.2 CDS 46991374 46991512 46991374 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46991608 46991724 46991608 ID=MS.gene049742.t1.exon8;Parent=MS.gene049742.t1
chr4.2 CDS 46991608 46991724 46991608 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46991803 46991910 46991803 ID=MS.gene049742.t1.exon9;Parent=MS.gene049742.t1
chr4.2 CDS 46991803 46991910 46991803 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46991994 46992056 46991994 ID=MS.gene049742.t1.exon10;Parent=MS.gene049742.t1
chr4.2 CDS 46991994 46992056 46991994 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46992288 46992398 46992288 ID=MS.gene049742.t1.exon11;Parent=MS.gene049742.t1
chr4.2 CDS 46992288 46992398 46992288 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46992490 46992661 46992490 ID=MS.gene049742.t1.exon12;Parent=MS.gene049742.t1
chr4.2 CDS 46992490 46992661 46992490 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46992739 46992860 46992739 ID=MS.gene049742.t1.exon13;Parent=MS.gene049742.t1
chr4.2 CDS 46992739 46992860 46992739 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46992948 46993085 46992948 ID=MS.gene049742.t1.exon14;Parent=MS.gene049742.t1
chr4.2 CDS 46992948 46993085 46992948 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46993172 46993314 46993172 ID=MS.gene049742.t1.exon15;Parent=MS.gene049742.t1
chr4.2 CDS 46993172 46993314 46993172 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46993378 46993443 46993378 ID=MS.gene049742.t1.exon16;Parent=MS.gene049742.t1
chr4.2 CDS 46993378 46993443 46993378 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46993545 46993608 46993545 ID=MS.gene049742.t1.exon17;Parent=MS.gene049742.t1
chr4.2 CDS 46993545 46993608 46993545 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46993957 46994083 46993957 ID=MS.gene049742.t1.exon18;Parent=MS.gene049742.t1
chr4.2 CDS 46993957 46994083 46993957 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46994179 46994252 46994179 ID=MS.gene049742.t1.exon19;Parent=MS.gene049742.t1
chr4.2 CDS 46994179 46994252 46994179 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46994359 46994453 46994359 ID=MS.gene049742.t1.exon20;Parent=MS.gene049742.t1
chr4.2 CDS 46994359 46994453 46994359 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46994548 46994579 46994548 ID=MS.gene049742.t1.exon21;Parent=MS.gene049742.t1
chr4.2 CDS 46994548 46994579 46994548 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
chr4.2 exon 46994671 46994840 46994671 ID=MS.gene049742.t1.exon22;Parent=MS.gene049742.t1
chr4.2 CDS 46994671 46994840 46994671 ID=cds.MS.gene049742.t1;Parent=MS.gene049742.t1
Gene Sequence

>MS.gene049742

ATGTCTCGTCGCAGTGGCGCAAACGATTATGATCCTCGCCGTGATCCTCGCCGTAACCAACTTTCTCCGGCGACTTCTCAACAATCTTCCGTCAATGCTCCACGATCAGGCCGCGGCGGTGGTCGTAACGGTGGTCGTGGTTCACACGGCGGACACACCGTTCCATCTTCCACTCCAACTCCGGTTACAGTCACCGTTTCTTCATCAACATCAGCGCCGGTTATTTATCATTCATCTGTCGTAGCACCGGTTGCCGCTAGTTCGAGTTCGGTTTCAACCGTTCCGTCTCCGTCTCTGCCTCCGACGAAGGTTTTGACGGAAGCGCTGAGTTCTGAACTTGAAAAGAAGCTTGCATTGGAGACGGTTCCGGAGGCTTCTGCTCCGTCGTCTCAGAAGGCGATAAGGTTCCCTGACCGTCCTGGTTTCGGTCAAGTTGGAAGGAAGATTCGAGTTCGCGCCAATCATTTCCATGTGCAAGTCGCTGCTGATAAAGTTCTTCATCATTACGATGTTTGTATCTTTAATTCTTTAATCTTTATCACTAATTACTAATATATCTATAACTTCAAATTAATAATATGAAATTGTTAAATTTCTGATTAAACAGTTAAATTACTAAACTAAGTATGATATGTCATAAGAGAAAAGTTGGTTGGAACGCGAAATATGAAATTTTGTGAAGACAGAAAATTTAGAGACAAAAAATTGAAAGAAATTTTTAGTTTTAGAGGAAAAAAAAACGGTTATATTTAAAGGACTGAATATTGGAAGAAAATTATGAAATTTTTTAACTCATTTTTCTCCATCTTTAGGTTTTTCGTTTTTGTTTATTATGTTGATAGGAAACTATAAAACAAATTAGTTACAATTGTGTTGTGGATTTAGAGATACTGAAAATTTGATTATGCTATTTTATATTCTTTATTTTATTTTTGAGTGTTCAGGCTTTGTTTATTGTGTTGATTTGAAAAAATAAATCTAGTTACTTACAATGTGTTATGGTTATTGAGAGGTTCAAAATTTTAATTACACTCAAGTGTTGATTTGAAATTTTTTATTACAAAGTATTATGTGTTTAGGTTTTGTTTATTATGTTGCTTTGAAACAATGAAACTTGCAAGTTAAAATGTGTCTGAATTTAGAGAGATTGAAAATTTTAATTATGCCCATAATTTGTTTTTTTATGAACTTAAATGCAAGTGTTTGGGTTTTTTGTTTTTGTTTATTATGTTTGATCTAAAACAATAAATCTAGTAAGTTACAATTGTGAGTTGGATTTAGAGACTGAAAATTTTGATTATGCCCTTGCATTTTTCTTTACTCCAATTTGAAGTGTTTAGATTTGATTGTTGGATTTAGAGACTGAAAATTTTGATTATGCTCTTGCATTTTTCTTAACTCCAATTTGAAGTGTTTAGATTTTTTTTTTTTTGTTTTGTTTATTATACTGATTTTAAAAAATCAAGCCAGTGATTAACAATGTGACATGAAATTCCTTAAAAAAAAACAATGTGATATGAAATTGAGAGGCTGAAAATTTTATTTAATATTTTTAGGTATTGATTGCACCCGAGATTGCATCGAAGAAAGTGTCCAGGGATGTTATCAATCAGTTGGTGAAAATGCATAAGGAGTCCCTATTGGGGAATAGGATTCCTGCCTATGATGGGAGGAAGAGTCTGTATACTGCTGGTCCATTACCCTTTACGTCGAAGGTTTTTGTGATTAACTTGGTTGATGAGAACAAAGGATCCTCTTCTGGTTCTGACACGTGAGTTCGTTGTAAATCGGTTTTTAATACTGATGGATACTACTTTCAATGTATATTATGATCCGATTTAAGGAAAAAGCGTGAACTGAAGCTTTTGATTTTATCATTTGTGACAGGAAAAAGCGTGAACGCGAGTTTAAGGTTACAATTAAGTTAGCTTCGGAAACGGATCTGAACCATCTTGCTCAGTTTCTCCGTCGTTTGCAGCTGGATTGTCCTTATGAAACCATACAAGCTCTTGACATTGCTTTGCGGGCAACTCCATCTGAAATGTAGCAACATTATTTTTTGTGTGGTTTATTTGGATTTGCTGATCGTGTTTTAATGTTCAGGTTTTAATTGATAGACTGTTTTTCAGGTATACTGTTGCAGGGAGGTCATTTTTCTCTCCCAGTTTGGGGGCACAGGGGCCTCTTGGCGGTGGGACAGAATATTGGAAAGGCTATTATCAAAGCCTTAGGCCAACACAGATGGGATTGTCCCTCAATATTGGTTTTACTTCTACACATTACTGATATTTTTCTTGTTGAGTATTTACAATTGAATCTATATTTCAGTCTTTGACAAGTGATACTTTGTTTCAGATGTTTCTTCGAGGGCTTTTTATGAACCAATTTGTGTGACTGACTTTGTTTCTAAGCATTTTAAGTTGAATTTTTCAAGGCGACTGTCTGATCAAGATCGTGTCAAGGTATTCGTGATGGATTTTTATTTTTTTATTATTATGTTATGAACTTGTATTAAATGAGGTGACATAAAATGAGACATGAACTACTTATAACTTGGTTATGTTTTAATAATTTCATGCCAAGGCTATTTTTCTTCATTTCCTTTATGACACCAAGAGTATGAGACGTTAGTTATCATTAGCGAATATATTTTTTTACTTTGTTTCAGATCACGAAAGCCTTGAGAGGTCTTAAGGTAAGATTCTCTCACGGAGGGATCATAAGGAGTTACAAGGTGACCGGTGTCTCAAAAGAGCCACTCAGAGACCTAACGTGAGTAACTTTATTTTCTTTACCATTTTAGTTATTCCTTAGATGTTGGAGTAAATTGCGTCTATTGTGTAATATTTAAAAAGGCTACTTATTTGCTTGAGGGAAAGGTGTATCCTCCTTGGCTAAGCTTTATTTTAACATCTTTAGGCTTGATCTCACTCTTCATTTTGTTTGTAATTTGTTATCCATTAAGGTTCATGCTTGATGACAAAGTAACTCGGAAAAAAGTTGTTGAACATTTCAATGAGAGATACGGTATTGTGTTAAAGCATCCACTTCTTCCCGCTCTCCAAGCCGGAAGTGACACGAGGCCTATGTATTTTCCAATGGAGGTTTTTCTCTTCTATACGTCTATGTATTGAGGTTCTGCATAATGTTTTATGATGTTGTATTAGACCTCAAATCTGTTGTGGTGTTTTTGTTGTAGCTTTGTCAAATTGAGCCTGGACAAAGGTACTCCAAAAGATTGAACGAAGAGCAAGTAACTAATCTTTTAAGGGCCAACTGTCAGCGTCCCCATCAGAGGGAAAGTGATATTAAAAATGTATGGTACCTATTTATATAGGTTGTGTTTGTGTGCGTGTTTTTTCCCCTTCATAATTGACATTTCATTTCTTGGCAGATCGTGAAGAAGCACCGTTTCAACATAGACAAAGTTGTGTGTGAGTTTGGTATCAATATAAGGGAGGAACTTGCTTTGATTGATGCTCGTGTTTTGCCTCCCCCAACGGTATACATAGGTTTATACTTAATAAAATTTGGCTAATTACCTTGTGTAATATTTAATAATCTTTAATTTTCTTCTGACTGCAGCTCAAATATGGTGGAGAGTCAAAAATTGACCCCATGATGGGACAATGGAATATGATGAAACATGTATGATAAATCTATTCTTTTTGTATGAATGCTTTCAAATTATTGTGGTCTTTATACTTTACTTTTGTGCTTGTGGAGCTTTTGGTCCTCTTGAATTTTATTTTACTTGTGTGTTCGATCTTATGTAAACATGTGACAATCTAAATTAATTTGATTTTAATATTAGATATTAGATTCTTTCCTATGACAATGGTTAAATTTTTTATCAATGTTGACCTTTTTATTTTGTAGAAAGTGGTTAATGGTGGCAAGGTGGAATTTTGGAGTTGCCTTAGCTTTTCTAGATTGAACCCAACTCAATTTTGTGCGGAGTTGGTTAATATGTGTCAAGCCAAGGGAATAGTATGTTGTTTGTTTGTACTATTTCATTTAATAATTATTATATGCTTCCCCATTTTGACAACCTTTTTTACCTGTTTGGATCTTGTACCAGCATTTCAACAGAGATCCTTTGGTACCTATAGCCCCAGCCAATTCAAATGAAATTGAGAAAGAGCTTGATGAATTCGACAAGAACTGCAAGGCAAAACTTAATAGTACAAACCAGAAAGGAAGGCTGCAACTGTTGATTGTAATTTTGCCTGATTTCAAGGGGAGGTTTTATGGTAAGTTTTCTATCAAGTCTAAATTAATTTCTAAGGTTTGGTTTTACTTTATTGAATTACTTTGTTTTGTTTTGCAGACCATATAAAGCATGAATGTGAAACTAAATTAGGAATTGTGACTCAATGTTGCGAGCCAAGGAAAGCGGCAAAGATGAATAAAATGTATCTGGAGAATTTGGCTTTAAAGATTAATGTGAAGGTAAGTTGTCCAGTAAATAATCTGCATGTTCCAATGTTTTTATGCGATTGCTACTAAGTTTTAAACATTTAGTTCTTGATTGTCTAGGTTGGTGGTCGTAACACCGTGCTGAATGATGCAGTTATATATAATATTCCCCTAGTAACTGATAAACCAACTATAATATTTGGAGCGGATGTAACACACCCTCATCCAGGAGAAGACTCAAGTCCTTCTATAGCTGCAGTAAGCTTTGTCTTTTTGCGTACTTATTTGCAGTTTTTTTATGAAATCATATTTATATTTTGTACTCTGCGTGTTGAATTATAAAGGTGGTGGCATCCATGGATTGGCCTTGCGTCACAAAGTACAGGGGAATGGTTTCTGCCCAGATTCAACGGGAAGAAATTATTCAAGATCTTTATACAGAAACAAAACATCCTCAAAAGGGAACTGTGCCTGGTGGAATGATAAGGTAATGGTGTTAGATTTGCATATTCCCCATGTTGAGACAACTGATTTTTCTTTTAATTTTCAGGGAGTTACTCCTGGCTTTCTATAGATCAAATAATAAACGGAAGCCTGAGAGGATCATATTTTACAGGTTGGATTTGGTTTTAACTAAATGATACATAAGGATGTCTATGTGCATATTTTAATTTATTTAATATCATTTCTTTTTCAATATTAATTTGTGTTTATCAGAGATGGAGTAAGTGAAGGGCAGTTTAGTCAGGTTTTGCTGTATGAGATGGATGCAATTTGGAAGGTATGGCAAATATGACTCCACATTTTATTTTATTTTTGTTTTCGGAAGGGGCTAGTGGTCCAACTCATACACTCATACACAAAACACATTGGGTCATGCGGGTTTGAATCTGCGCCTAACATACGTCCATATATCAGATATCCACTGAGGAGGTCAATTAACATATTTAACCACGGAACATAGTGACCACAGAAATGCTCTTGCTGTTTTTTCTTTATTTTTTTACTCGTTCTATGCAAGTGCCTTGTAGATAAAATAAGGAGTTTCTCAATATCTTTTTACTTTTTATTCTTTTTCTTTATATACAAATGTGTTCTATTTTTGATGAATTTTTCAATTCGGTCTCAGGCTTGTGCCTCATTTGAGGAGGGGTATCTACCAAAAGTTACTTTTGTGGTTGTCCAAAAGAGACATCACACCCGATTCTTTCCCGTCAGTTCTGATCAGACAGATAAAAGTGGAAACATAATGCCAGGTTTTCAATTTATTTCTTGCCTTCCCTACAACTGGTACCTGTTCTCATTCCAATTTATCTATATGTACTGATTTTGTTGTTTGAAATTGTCAAAGGAACTGTGGTAGACACAACCATTTGCCATCCCAGGGAATTTGATTTTTATCTGAACAGCCATGCTGGGATTCAAGTAATACTTACTAGATCCATTAATTTTGTATGCTCGTATGTACTAGTTGCTCAAATGGCATTTAACCAATCTGTGCTGTTTCCATTTGAATGTCTTCGTTTTTCAGGGGACTAGTCGACCAACTCATTATCATGTGTTGTTTGATGAAAATAACTTTAGTGCAGATCAGTTACAGGGTTTAACCAATAACTTGTGTTACACGTATGAACCTTTTCATTTATTTTTCTAGTCTGAACTACTGTTTTCATTTAATTTTAGAAGCCCTGATCTCATATTTTCTTTTTTCACTTTTCAGTTATGCAAGGTGTACTCGATCGGTGTCAATAGGTATATTACTCTATTTTCTTTGTTGGTTTTACTGTAGTCCATACAAAACTATAATTTAGTTTTTTACTAGAATATTGATCCTTGTATGCAGTTCCTCCTGCGTATTATGCCCACTTGTTAGCTTCCCGAGCTCGCTGCTACATTAGTGATGTGGAAAATCCTGATTCCGGTTCTGCAAGTGGTAACAGGAGTGCCCCCAACTCTGTTGCAGCACTGCCCTCAATCATGGAAAACGTCAAAGAATTTATGTTTTACTGTTGA
Protein sequence

>MS.gene049742.t1

MSRRSGANDYDPRRDPRRNQLSPATSQQSSVNAPRSGRGGGRNGGRGSHGGHTVPSSTPTPVTVTVSSSTSAPVIYHSSVVAPVAASSSSVSTVPSPSLPPTKVLTEALSSELEKKLALETVPEASAPSSQKAIRFPDRPGFGQVGRKIRVRANHFHVQVAADKVLHHYDVLIAPEIASKKVSRDVINQLVKMHKESLLGNRIPAYDGRKSLYTAGPLPFTSKVFVINLVDENKGSSSGSDTKKREREFKVTIKLASETDLNHLAQFLRRLQLDCPYETIQALDIALRATPSEMYTVAGRSFFSPSLGAQGPLGGGTEYWKGYYQSLRPTQMGLSLNIDVSSRAFYEPICVTDFVSKHFKLNFSRRLSDQDRVKITKALRGLKVRFSHGGIIRSYKVTGVSKEPLRDLTFMLDDKVTRKKVVEHFNERYGIVLKHPLLPALQAGSDTRPMYFPMELCQIEPGQRYSKRLNEEQVTNLLRANCQRPHQRESDIKNIVKKHRFNIDKVVCEFGINIREELALIDARVLPPPTLKYGGESKIDPMMGQWNMMKHKVVNGGKVEFWSCLSFSRLNPTQFCAELVNMCQAKGIHFNRDPLVPIAPANSNEIEKELDEFDKNCKAKLNSTNQKGRLQLLIVILPDFKGRFYDHIKHECETKLGIVTQCCEPRKAAKMNKMYLENLALKINVKVGGRNTVLNDAVIYNIPLVTDKPTIIFGADVTHPHPGEDSSPSIAAVVASMDWPCVTKYRGMVSAQIQREEIIQDLYTETKHPQKGTVPGGMIRELLLAFYRSNNKRKPERIIFYRDGVSEGQFSQVLLYEMDAIWKACASFEEGYLPKVTFVVVQKRHHTRFFPVSSDQTDKSGNIMPGTVVDTTICHPREFDFYLNSHAGIQGTSRPTHYHVLFDENNFSADQLQGLTNNLCYTYARCTRSVSIVPPAYYAHLLASRARCYISDVENPDSGSASGNRSAPNSVAALPSIMENVKEFMFYC