Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05030.t1 | XP_003600621.1 | 99.6 | 492 | 2 | 0 | 1 | 492 | 1 | 492 | 1.70E-291 | 1011.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05030.t1 | Q8H191 | 70.0 | 490 | 143 | 3 | 7 | 492 | 8 | 497 | 2.7e-205 | 716.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05030.t1 | G7J7X8 | 99.6 | 492 | 2 | 0 | 1 | 492 | 1 | 492 | 1.2e-291 | 1011.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene22232 | MS.gene05030 | PPI |
MS.gene05030 | MS.gene92026 | PPI |
MS.gene05030 | MS.gene038090 | PPI |
MS.gene05030 | MS.gene017025 | PPI |
MS.gene05030 | MS.gene47679 | PPI |
MS.gene019144 | MS.gene05030 | PPI |
MS.gene05030 | MS.gene46961 | PPI |
MS.gene05030 | MS.gene46317 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05030.t1 | MTR_3g064370 | 99.593 | 492 | 2 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1021 |
MS.gene05030.t1 | MTR_3g064370 | 99.759 | 415 | 1 | 0 | 78 | 492 | 1 | 415 | 0.0 | 865 |
MS.gene05030.t1 | MTR_3g064370 | 99.486 | 389 | 2 | 0 | 1 | 389 | 1 | 389 | 0.0 | 806 |
MS.gene05030.t1 | MTR_5g090300 | 64.431 | 492 | 171 | 1 | 1 | 492 | 1 | 488 | 0.0 | 634 |
MS.gene05030.t1 | MTR_3g449620 | 64.059 | 473 | 168 | 1 | 20 | 492 | 20 | 490 | 0.0 | 619 |
MS.gene05030.t1 | MTR_1g023510 | 33.925 | 507 | 247 | 16 | 15 | 454 | 856 | 1341 | 4.07e-66 | 232 |
MS.gene05030.t1 | MTR_3g113170 | 34.755 | 469 | 251 | 14 | 30 | 454 | 883 | 1340 | 9.88e-65 | 228 |
MS.gene05030.t1 | MTR_3g113170 | 34.755 | 469 | 251 | 14 | 30 | 454 | 883 | 1340 | 1.03e-64 | 228 |
MS.gene05030.t1 | MTR_6g084700 | 33.261 | 463 | 269 | 12 | 29 | 464 | 221 | 670 | 8.10e-56 | 199 |
MS.gene05030.t1 | MTR_3g055090 | 31.236 | 445 | 272 | 12 | 29 | 454 | 160 | 589 | 7.71e-54 | 193 |
MS.gene05030.t1 | MTR_1g050535 | 30.892 | 437 | 268 | 12 | 44 | 460 | 225 | 647 | 2.49e-49 | 181 |
MS.gene05030.t1 | MTR_1g050535 | 30.892 | 437 | 268 | 12 | 44 | 460 | 225 | 647 | 3.30e-49 | 181 |
MS.gene05030.t1 | MTR_8g464450 | 30.337 | 445 | 276 | 13 | 29 | 454 | 163 | 592 | 6.35e-43 | 162 |
MS.gene05030.t1 | MTR_5g087920 | 59.649 | 114 | 46 | 0 | 280 | 393 | 12 | 125 | 1.70e-39 | 140 |
MS.gene05030.t1 | MTR_3g033000 | 25.727 | 447 | 283 | 12 | 53 | 474 | 33 | 455 | 1.88e-26 | 112 |
MS.gene05030.t1 | MTR_3g033000 | 24.474 | 380 | 239 | 11 | 53 | 407 | 33 | 389 | 4.63e-17 | 83.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05030.t1 | AT1G65840 | 70.000 | 490 | 143 | 3 | 7 | 492 | 8 | 497 | 0.0 | 719 |
MS.gene05030.t1 | AT2G43020 | 65.880 | 466 | 157 | 1 | 27 | 492 | 27 | 490 | 0.0 | 627 |
MS.gene05030.t1 | AT3G59050 | 63.617 | 470 | 166 | 1 | 23 | 492 | 24 | 488 | 0.0 | 622 |
MS.gene05030.t1 | AT4G16310 | 33.266 | 496 | 243 | 17 | 30 | 454 | 620 | 1098 | 1.03e-62 | 222 |
MS.gene05030.t1 | AT4G16310 | 33.266 | 496 | 243 | 17 | 30 | 454 | 620 | 1098 | 1.03e-62 | 222 |
MS.gene05030.t1 | AT4G16310 | 33.266 | 496 | 243 | 17 | 30 | 454 | 620 | 1098 | 1.03e-62 | 222 |
MS.gene05030.t1 | AT4G16310 | 33.266 | 496 | 243 | 17 | 30 | 454 | 620 | 1098 | 1.03e-62 | 222 |
MS.gene05030.t1 | AT4G16310 | 33.266 | 496 | 243 | 17 | 30 | 454 | 620 | 1098 | 1.03e-62 | 222 |
MS.gene05030.t1 | AT3G10390 | 32.522 | 452 | 272 | 12 | 24 | 456 | 181 | 618 | 4.05e-58 | 206 |
MS.gene05030.t1 | AT3G10390 | 32.522 | 452 | 272 | 12 | 24 | 456 | 181 | 618 | 1.08e-57 | 205 |
MS.gene05030.t1 | AT3G10390 | 32.522 | 452 | 272 | 12 | 24 | 456 | 233 | 670 | 1.13e-57 | 206 |
MS.gene05030.t1 | AT3G10390 | 32.522 | 452 | 272 | 12 | 24 | 456 | 233 | 670 | 1.49e-57 | 206 |
MS.gene05030.t1 | AT1G62830 | 32.379 | 454 | 271 | 12 | 28 | 459 | 266 | 705 | 5.04e-54 | 195 |
MS.gene05030.t1 | AT3G13682 | 31.982 | 444 | 270 | 12 | 29 | 454 | 161 | 590 | 6.62e-46 | 171 |
MS.gene05030.t1 | AT4G29720 | 24.953 | 529 | 292 | 14 | 30 | 460 | 7 | 528 | 8.17e-34 | 134 |
MS.gene05030.t1 | AT5G13700 | 27.014 | 422 | 257 | 13 | 53 | 451 | 30 | 423 | 1.32e-28 | 118 |
Find 125 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGGATTGCCTGTTGCTTTA+TGG | 0.106802 | 3.4:-66107110 | None:intergenic |
AGAAACTTTCAAGAGAATTT+TGG | 0.193423 | 3.4:+66104492 | MS.gene05030:CDS |
GCTCCGTCAGTTATAGTTAT+TGG | 0.214197 | 3.4:+66103698 | MS.gene05030:CDS |
GGCTCCATTGATACGTTGCC+TGG | 0.228369 | 3.4:+66104170 | MS.gene05030:CDS |
CCCTTAGGTAATATCTTCTT+TGG | 0.252164 | 3.4:+66107911 | MS.gene05030:CDS |
AGCTTATTCTGCTGGGGTTA+TGG | 0.271739 | 3.4:+66107976 | MS.gene05030:CDS |
AAAACTGTCAAAGATATCTT+TGG | 0.275839 | 3.4:+66108005 | MS.gene05030:CDS |
GTTTGGTCAGGTCACTCTTT+TGG | 0.276177 | 3.4:+66103885 | MS.gene05030:intron |
TTGGCCTGACGTAGAACTTA+TGG | 0.323181 | 3.4:+66107041 | MS.gene05030:CDS |
CAATCCGGTTCTTGTTTATA+TGG | 0.326429 | 3.4:+66107125 | MS.gene05030:CDS |
TTTGCAAGAGCATTTATAAC+TGG | 0.327061 | 3.4:-66106286 | None:intergenic |
GTGCATGGAGCTTATTCTGC+TGG | 0.342809 | 3.4:+66107968 | MS.gene05030:CDS |
GTTTCTGCAATTTCAGATCT+TGG | 0.343293 | 3.4:+66106973 | MS.gene05030:CDS |
TGAAATTCGACAAAGTGTTT+TGG | 0.350873 | 3.4:+66107022 | MS.gene05030:CDS |
CTCAATCTCCATAAAGCAAC+AGG | 0.361876 | 3.4:+66107102 | MS.gene05030:CDS |
GTTATTGGTGCTGGAATCTC+AGG | 0.368456 | 3.4:+66103713 | MS.gene05030:CDS |
GAGTAACACCCAAGAGAGTT+TGG | 0.372369 | 3.4:-66107839 | None:intergenic |
TGGCCTGACGTAGAACTTAT+GGG | 0.372848 | 3.4:+66107042 | MS.gene05030:CDS |
GCTATCATAACTGTTCCTAT+TGG | 0.374869 | 3.4:+66106898 | MS.gene05030:CDS |
CATGTACTCTCTGGTGGTCA+TGG | 0.381933 | 3.4:+66106241 | MS.gene05030:CDS |
GTTGTAGCCACTAGATATCT+TGG | 0.391602 | 3.4:-66106827 | None:intergenic |
ATTCATACTGACTACTCGTT+TGG | 0.393779 | 3.4:+66103934 | MS.gene05030:CDS |
TATACCATTGCAGCACTTCA+TGG | 0.399265 | 3.4:-66105519 | None:intergenic |
TCAGTATCTTGTGTCACATT+GGG | 0.401037 | 3.4:+66107808 | MS.gene05030:CDS |
TCTGCTAGACATGAAACATT+AGG | 0.401567 | 3.4:+66108064 | MS.gene05030:CDS |
TGGGTGTTACTCTTATGATT+TGG | 0.403171 | 3.4:+66107850 | MS.gene05030:CDS |
TGCATGGAGCTTATTCTGCT+GGG | 0.408422 | 3.4:+66107969 | MS.gene05030:CDS |
CACGAGGCTCCCATGTCAAC+TGG | 0.412257 | 3.4:-66103961 | None:intergenic |
CCGTCTGCTGTGGAACTTGA+TGG | 0.413992 | 3.4:-66104456 | None:intergenic |
GGAACAGATCCAAACTCTCT+TGG | 0.417611 | 3.4:+66107830 | MS.gene05030:CDS |
CTGACGGAGCTGGTCTTTGT+TGG | 0.419602 | 3.4:-66103685 | None:intergenic |
CTCTGGTGGTCATGGGCTCA+TGG | 0.428377 | 3.4:+66106249 | MS.gene05030:CDS |
ATAATTACCTTTCCAGATCA+TGG | 0.433077 | 3.4:-66104239 | None:intergenic |
CTAACCATCGAGAAAATTGT+TGG | 0.435965 | 3.4:-66102659 | None:intergenic |
ACTTTCCTCTTCAAATTTCG+AGG | 0.438614 | 3.4:+66108092 | MS.gene05030:CDS |
ACCTTCCAATCAGGAAGTCT+TGG | 0.440787 | 3.4:-66106952 | None:intergenic |
TTCACTGAAAACCTGGGATC+AGG | 0.441813 | 3.4:+66105585 | MS.gene05030:CDS |
AAACTGTCAAAGATATCTTT+GGG | 0.441972 | 3.4:+66108006 | MS.gene05030:CDS |
TTGAACCAAGACTTCCTGAT+TGG | 0.448952 | 3.4:+66106947 | MS.gene05030:CDS |
GAACAGATCCAAACTCTCTT+GGG | 0.451977 | 3.4:+66107831 | MS.gene05030:CDS |
TGATTACTTTCCAGGCTACA+TGG | 0.454213 | 3.4:+66104126 | MS.gene05030:intron |
AAAATAGCCACATGCATAAG+AGG | 0.456214 | 3.4:-66107079 | None:intergenic |
CGATTTCAATTGTGCTGGAT+AGG | 0.458980 | 3.4:+66105383 | MS.gene05030:CDS |
CTTAATCTCTACCTTAGTTG+TGG | 0.460116 | 3.4:-66105409 | None:intergenic |
TGATTTGGTTGGAAAATCAA+TGG | 0.460678 | 3.4:+66107865 | MS.gene05030:CDS |
TCAGTTATAGTTATTGGTGC+TGG | 0.465534 | 3.4:+66103704 | MS.gene05030:CDS |
TTGTTTATATGGCAGCTGGC+AGG | 0.468868 | 3.4:+66107136 | MS.gene05030:CDS |
GCTCCATTGATACGTTGCCT+GGG | 0.470172 | 3.4:+66104171 | MS.gene05030:CDS |
TAGGTAATATCTTCTTTGGT+GGG | 0.470512 | 3.4:+66107915 | MS.gene05030:CDS |
ATTGCAGAAACCTTCCAATC+AGG | 0.470713 | 3.4:-66106961 | None:intergenic |
TGAAGCGATTTCAATTGTGC+TGG | 0.471283 | 3.4:+66105378 | MS.gene05030:CDS |
GTTTGGTTGTCCAGTTGACA+TGG | 0.475397 | 3.4:+66103951 | MS.gene05030:CDS |
CAGCAGACGGTCATTGAAGT+TGG | 0.479919 | 3.4:+66104469 | MS.gene05030:CDS |
TGTCTTATATGACCATGATC+TGG | 0.483301 | 3.4:+66104227 | MS.gene05030:CDS |
AGCTATGAGCTTAGACAACC+AGG | 0.487346 | 3.4:+66107940 | MS.gene05030:CDS |
TTCAGTATCTTGTGTCACAT+TGG | 0.491990 | 3.4:+66107807 | MS.gene05030:CDS |
CCATAAAGCAACAGGCAATC+CGG | 0.494292 | 3.4:+66107110 | MS.gene05030:CDS |
GTTCTTGTTTATATGGCAGC+TGG | 0.495748 | 3.4:+66107132 | MS.gene05030:CDS |
AGCCCCAGGCAACGTATCAA+TGG | 0.496497 | 3.4:-66104174 | None:intergenic |
ACCAAAGAAGATATTACCTA+AGG | 0.498919 | 3.4:-66107912 | None:intergenic |
GCTGCCATATAAACAAGAAC+CGG | 0.501410 | 3.4:-66107129 | None:intergenic |
ATATGATTTCACTGAAAACC+TGG | 0.505825 | 3.4:+66105578 | MS.gene05030:CDS |
ATGTACTCTCTGGTGGTCAT+GGG | 0.512052 | 3.4:+66106242 | MS.gene05030:CDS |
GACAAGCTTCGTGCACCCTT+AGG | 0.512503 | 3.4:+66107896 | MS.gene05030:CDS |
TTAGGTAATATCTTCTTTGG+TGG | 0.515446 | 3.4:+66107914 | MS.gene05030:CDS |
CAAGGTAATGGTTACCTTGG+AGG | 0.520100 | 3.4:+66106849 | MS.gene05030:CDS |
TTGGAGTCACGAGATAGGCT+TGG | 0.522491 | 3.4:+66103904 | MS.gene05030:CDS |
TCAGAAACTGAAATGTCCTC+AGG | 0.524543 | 3.4:-66105358 | None:intergenic |
CTTACTGGCTCACAAGCATC+AGG | 0.525314 | 3.4:-66107234 | None:intergenic |
TTATAGGAACATGTACTCTC+TGG | 0.527260 | 3.4:+66106232 | MS.gene05030:intron |
TGTTACTCTTATGATTTGGT+TGG | 0.527321 | 3.4:+66107854 | MS.gene05030:CDS |
AATGGCACTTGCCTGATCCC+AGG | 0.528379 | 3.4:-66105596 | None:intergenic |
CAACAAGGTAATGGTTACCT+TGG | 0.528876 | 3.4:+66106846 | MS.gene05030:CDS |
GCAATTTCAGATCTTGGTGT+AGG | 0.529421 | 3.4:+66106979 | MS.gene05030:CDS |
ACCAAGACTTCCTGATTGGA+AGG | 0.533754 | 3.4:+66106951 | MS.gene05030:CDS |
ATATATGCAGAATGGAAGCT+TGG | 0.534236 | 3.4:+66105539 | MS.gene05030:CDS |
TTGATATACGCTTGAACCAC+AGG | 0.534596 | 3.4:+66106314 | MS.gene05030:CDS |
AACTGCAGACAGGGAAAGTG+AGG | 0.534952 | 3.4:+66105326 | MS.gene05030:intron |
GACAACCAGGGGTCTGTGCA+TGG | 0.535236 | 3.4:+66107953 | MS.gene05030:CDS |
AAGCTCCATGCACAGACCCC+TGG | 0.544046 | 3.4:-66107958 | None:intergenic |
ATACCATTGCAGCACTTCAT+GGG | 0.544743 | 3.4:-66105518 | None:intergenic |
TGGATAGGCATCCACAACTA+AGG | 0.553526 | 3.4:+66105398 | MS.gene05030:CDS |
TAGTGGCTACAACAAGGTAA+TGG | 0.557798 | 3.4:+66106837 | MS.gene05030:CDS |
GAGTCACGAGATAGGCTTGG+TGG | 0.558084 | 3.4:+66103907 | MS.gene05030:CDS |
GTCTAGCAGAAACTTGAGAC+AGG | 0.561810 | 3.4:-66108051 | None:intergenic |
CTCCATTGATACGTTGCCTG+GGG | 0.562679 | 3.4:+66104172 | MS.gene05030:CDS |
TTTCCCATGAAGTGCTGCAA+TGG | 0.564817 | 3.4:+66105515 | MS.gene05030:CDS |
CAGTATCTTGTGTCACATTG+GGG | 0.571869 | 3.4:+66107809 | MS.gene05030:CDS |
CATATCCTCGAAATTTGAAG+AGG | 0.574076 | 3.4:-66108097 | None:intergenic |
ACACCCATAAGTTCTACGTC+AGG | 0.575126 | 3.4:-66107045 | None:intergenic |
TTTGGTTGTCCAGTTGACAT+GGG | 0.582802 | 3.4:+66103952 | MS.gene05030:CDS |
AAAGTTTCTGCCATCCTCCA+AGG | 0.584080 | 3.4:-66106863 | None:intergenic |
GCAACGTATCAATGGAGCCA+AGG | 0.586871 | 3.4:-66104166 | None:intergenic |
ACTTCAATGACCGTCTGCTG+TGG | 0.590093 | 3.4:-66104466 | None:intergenic |
TACGATATAGTGTAAGCCCC+AGG | 0.596492 | 3.4:-66104188 | None:intergenic |
CCAAAGAAGATATTACCTAA+GGG | 0.599654 | 3.4:-66107911 | None:intergenic |
GGTCATGGGCTCATGGTGCA+AGG | 0.600222 | 3.4:+66106256 | MS.gene05030:CDS |
CCTCGTCAGATAACTTCTCA+AGG | 0.605882 | 3.4:-66107170 | None:intergenic |
ATAACTATAACTGACGGAGC+TGG | 0.605968 | 3.4:-66103695 | None:intergenic |
GCTCCTACCTCTTATGCATG+TGG | 0.608376 | 3.4:+66107072 | MS.gene05030:CDS |
AGGTAATATCTTCTTTGGTG+GGG | 0.611340 | 3.4:+66107916 | MS.gene05030:CDS |
TATATGACCATGATCTGGAA+AGG | 0.611366 | 3.4:+66104232 | MS.gene05030:CDS |
GCATGGAGCTTATTCTGCTG+GGG | 0.612462 | 3.4:+66107970 | MS.gene05030:CDS |
GCAATGGTATATATGCAGAA+TGG | 0.613146 | 3.4:+66105531 | MS.gene05030:CDS |
CCATCAAGTTCCACAGCAGA+CGG | 0.613687 | 3.4:+66104456 | MS.gene05030:CDS |
CAACGTATCAATGGAGCCAA+GGG | 0.616610 | 3.4:-66104165 | None:intergenic |
TAGCCACATGCATAAGAGGT+AGG | 0.626496 | 3.4:-66107075 | None:intergenic |
GTAATGGTTACCTTGGAGGA+TGG | 0.627124 | 3.4:+66106853 | MS.gene05030:CDS |
TTATTGGTGCTGGAATCTCA+GGG | 0.628361 | 3.4:+66103714 | MS.gene05030:CDS |
TATGATTTCACTGAAAACCT+GGG | 0.633061 | 3.4:+66105579 | MS.gene05030:CDS |
TAGGAACATGTACTCTCTGG+TGG | 0.636418 | 3.4:+66106235 | MS.gene05030:intron |
GATATCTAGTGGCTACAACA+AGG | 0.637340 | 3.4:+66106831 | MS.gene05030:CDS |
TATGTTAATTGCAGGCAACA+AGG | 0.639625 | 3.4:+66105490 | MS.gene05030:intron |
TGAAATCATATCAGCATCAG+CGG | 0.641993 | 3.4:-66105566 | None:intergenic |
CCTTGAGAAGTTATCTGACG+AGG | 0.645323 | 3.4:+66107170 | MS.gene05030:CDS |
AGTTTGTAATGAGAATCCCT+TGG | 0.647576 | 3.4:+66104149 | MS.gene05030:CDS |
GCACCAATAACTATAACTGA+CGG | 0.665849 | 3.4:-66103701 | None:intergenic |
CTATGAGCTTAGACAACCAG+GGG | 0.673759 | 3.4:+66107942 | MS.gene05030:CDS |
AGGGTGACCAAGATATCTAG+TGG | 0.675271 | 3.4:+66106820 | MS.gene05030:intron |
GCTATGAGCTTAGACAACCA+GGG | 0.687589 | 3.4:+66107941 | MS.gene05030:CDS |
CTTACACTATATCGTACAAG+CGG | 0.701168 | 3.4:+66104195 | MS.gene05030:CDS |
AGTGAGGGATGAGCATCCTG+AGG | 0.703505 | 3.4:+66105342 | MS.gene05030:CDS |
ACTGCAGACAGGGAAAGTGA+GGG | 0.709241 | 3.4:+66105327 | MS.gene05030:intron |
ACACCTTAAAAGATGCATCG+TGG | 0.717302 | 3.4:-66103757 | None:intergenic |
CAGTTGACATGGGAGCCTCG+TGG | 0.734644 | 3.4:+66103962 | MS.gene05030:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATCAAATAATATTAAAAG+GGG | - | chr3.4:66102709-66102728 | None:intergenic | 10.0% |
!! | AATATTATAATCTTAAAACA+TGG | - | chr3.4:66103105-66103124 | None:intergenic | 10.0% |
!! | ATATAACAATAATAACTAAT+AGG | - | chr3.4:66106132-66106151 | None:intergenic | 10.0% |
!! | GTAAATCAAATAATATTAAA+AGG | - | chr3.4:66102711-66102730 | None:intergenic | 10.0% |
!!! | ATTTGATTTACTAAAAAAAT+TGG | + | chr3.4:66102720-66102739 | MS.gene05030:intron | 10.0% |
!!! | GATATTTTATATTATTTTTC+CGG | + | chr3.4:66103208-66103227 | MS.gene05030:intron | 10.0% |
!!! | TTTCTTTTATGATATATAAT+AGG | + | chr3.4:66103450-66103469 | MS.gene05030:intron | 10.0% |
!!! | TTTGATTTACTAAAAAAATT+GGG | + | chr3.4:66102721-66102740 | MS.gene05030:intron | 10.0% |
!! | TCTTGATATTTATACAATTT+AGG | + | chr3.4:66105182-66105201 | MS.gene05030:intron | 15.0% |
!! | TGTAAAATGTTGTTAAAAAT+GGG | + | chr3.4:66107610-66107629 | MS.gene05030:intron | 15.0% |
!! | TTGTAAAATGTTGTTAAAAA+TGG | + | chr3.4:66107609-66107628 | MS.gene05030:intron | 15.0% |
!!! | AAACTTTAGTTTTTTCATAA+TGG | + | chr3.4:66105811-66105830 | MS.gene05030:intron | 15.0% |
!!! | AATTTTTTACAATTCACAAA+TGG | + | chr3.4:66104540-66104559 | MS.gene05030:intron | 15.0% |
!!! | ATTTTTTAGATCAATTTTGT+CGG | - | chr3.4:66107372-66107391 | None:intergenic | 15.0% |
!!! | GATGTATAGAAAATATATTT+TGG | + | chr3.4:66105628-66105647 | MS.gene05030:intron | 15.0% |
!!! | TTTTAAAGATACAGTTAAAT+TGG | + | chr3.4:66106549-66106568 | MS.gene05030:intron | 15.0% |
!!! | TTTTAACAACATTTTACAAA+TGG | - | chr3.4:66107608-66107627 | None:intergenic | 15.0% |
!!! | TTTTGTTTTTACTTTTTACA+TGG | + | chr3.4:66105678-66105697 | MS.gene05030:intron | 15.0% |
!! | AAAAGAAAGACTAAATAAAG+AGG | - | chr3.4:66103804-66103823 | None:intergenic | 20.0% |
!! | AAACAAAACTTGAAAAGAAA+TGG | + | chr3.4:66106590-66106609 | MS.gene05030:intron | 20.0% |
!! | AAATGAAAAACAAAACTACA+GGG | + | chr3.4:66104868-66104887 | MS.gene05030:intron | 20.0% |
!! | ACATGAGAAAAAATTATCAT+AGG | - | chr3.4:66106016-66106035 | None:intergenic | 20.0% |
!! | ATAAATGAGGTATAAAAAAC+TGG | + | chr3.4:66105921-66105940 | MS.gene05030:intron | 20.0% |
!! | ATATACAAAATCATAACTAC+TGG | - | chr3.4:66103553-66103572 | None:intergenic | 20.0% |
!! | ATATCATGTAAATGTTAATG+AGG | - | chr3.4:66105132-66105151 | None:intergenic | 20.0% |
!! | ATTTAGAAAACATGTCTTAA+CGG | - | chr3.4:66102908-66102927 | None:intergenic | 20.0% |
!! | CTATACATCAAATAATACAA+TGG | - | chr3.4:66105617-66105636 | None:intergenic | 20.0% |
!! | TAAATGAAAAACAAAACTAC+AGG | + | chr3.4:66104867-66104886 | MS.gene05030:intron | 20.0% |
!! | TATAAAATATCCAAGTCTAT+AGG | - | chr3.4:66103199-66103218 | None:intergenic | 20.0% |
!! | TCAACAATAATCTTAAATGA+AGG | - | chr3.4:66105736-66105755 | None:intergenic | 20.0% |
!! | TGAATATATTTGATGAGAAT+TGG | - | chr3.4:66104824-66104843 | None:intergenic | 20.0% |
!!! | AAATGGTTTTTGTTTAATTG+TGG | + | chr3.4:66102924-66102943 | MS.gene05030:intron | 20.0% |
!!! | AGGAAAGATTTTTCATTATA+TGG | + | chr3.4:66103581-66103600 | MS.gene05030:intron | 20.0% |
!!! | ATAATTTTTTCTCATGTCAT+TGG | + | chr3.4:66106019-66106038 | MS.gene05030:intron | 20.0% |
!!! | ATTTATTTTCATTTGTCGTT+TGG | + | chr3.4:66103868-66103887 | MS.gene05030:intron | 20.0% |
!!! | GATTTTGTATATTGAAAAAC+AGG | + | chr3.4:66103561-66103580 | MS.gene05030:intron | 20.0% |
!!! | GTTTTTTCAAAAGAAATTGA+CGG | + | chr3.4:66107537-66107556 | MS.gene05030:intron | 20.0% |
!!! | TAAGTTGATCTTCTATATAT+TGG | - | chr3.4:66106159-66106178 | None:intergenic | 20.0% |
!!! | TAATTTTTTCTCATGTCATT+GGG | + | chr3.4:66106020-66106039 | MS.gene05030:intron | 20.0% |
!!! | TTTAGTTTTTTCATAATGGT+TGG | + | chr3.4:66105815-66105834 | MS.gene05030:intron | 20.0% |
!!! | TTTTTTGTTGATTTATGTGT+GGG | + | chr3.4:66102763-66102782 | MS.gene05030:intron | 20.0% |
!!! | TTTTTTTGTTGATTTATGTG+TGG | + | chr3.4:66102762-66102781 | MS.gene05030:intron | 20.0% |
! | AAAACTGTCAAAGATATCTT+TGG | + | chr3.4:66108005-66108024 | MS.gene05030:CDS | 25.0% |
! | AAACTGTCAAAGATATCTTT+GGG | + | chr3.4:66108006-66108025 | MS.gene05030:CDS | 25.0% |
! | AATGAAAAACAAAACTACAG+GGG | + | chr3.4:66104869-66104888 | MS.gene05030:intron | 25.0% |
! | ACAAATCATAGATGTATGAT+TGG | + | chr3.4:66106498-66106517 | MS.gene05030:intron | 25.0% |
! | ATGTAAATGTTAATGAGGTA+TGG | - | chr3.4:66105127-66105146 | None:intergenic | 25.0% |
! | ATTCATGTTGTGATACTAAT+AGG | - | chr3.4:66104751-66104770 | None:intergenic | 25.0% |
! | CTGTTATGTGTTCTAATTAT+AGG | + | chr3.4:66106216-66106235 | MS.gene05030:intron | 25.0% |
! | GAATAAATGTACAACCATTT+AGG | + | chr3.4:66105436-66105455 | MS.gene05030:intron | 25.0% |
! | GATATAGTTAAACATCACTT+AGG | + | chr3.4:66106623-66106642 | MS.gene05030:intron | 25.0% |
! | TAATTGACTATGTTAATTGC+AGG | + | chr3.4:66105482-66105501 | MS.gene05030:intron | 25.0% |
! | TAATTTAAATACACTGTCCA+TGG | + | chr3.4:66103078-66103097 | MS.gene05030:intron | 25.0% |
! | TTATACACAAAAATCAGAAG+CGG | - | chr3.4:66103633-66103652 | None:intergenic | 25.0% |
! | TTTACAAAATGGTCAAAATC+TGG | - | chr3.4:66106788-66106807 | None:intergenic | 25.0% |
!! | AACTCAGATTTTATTCTGTT+AGG | + | chr3.4:66105039-66105058 | MS.gene05030:intron | 25.0% |
!! | AATTCACAAATGGATTTACT+TGG | + | chr3.4:66104550-66104569 | MS.gene05030:intron | 25.0% |
!! | AGAAACTTTCAAGAGAATTT+TGG | + | chr3.4:66104492-66104511 | MS.gene05030:CDS | 25.0% |
!! | CTTCTGATTTTTGTGTATAA+TGG | + | chr3.4:66103633-66103652 | MS.gene05030:intron | 25.0% |
!! | GTTAAGACATGTTTTCTAAA+TGG | + | chr3.4:66102907-66102926 | MS.gene05030:intron | 25.0% |
!! | GTTTTTATATCTCTCGTAAA+TGG | - | chr3.4:66107565-66107584 | None:intergenic | 25.0% |
!! | TAGTTTTCTTTTCTCACAAA+TGG | + | chr3.4:66104689-66104708 | MS.gene05030:intron | 25.0% |
!! | TCTTTTTACCTGAATTATGT+CGG | + | chr3.4:66103818-66103837 | MS.gene05030:intron | 25.0% |
!! | TTGAGTGTTTGTTAGTTATA+AGG | + | chr3.4:66103256-66103275 | MS.gene05030:intron | 25.0% |
!!! | AAAGCAAACTTTTAAGATAC+GGG | - | chr3.4:66107722-66107741 | None:intergenic | 25.0% |
!!! | ATTGTTTTTACCTATAGACT+TGG | + | chr3.4:66103186-66103205 | MS.gene05030:intron | 25.0% |
!!! | GAAAGCAAACTTTTAAGATA+CGG | - | chr3.4:66107723-66107742 | None:intergenic | 25.0% |
!!! | GGAATTACTAGCATTTTAAT+TGG | + | chr3.4:66103277-66103296 | MS.gene05030:intron | 25.0% |
!!! | TGGTCATTTTTCATGATTTA+TGG | + | chr3.4:66106372-66106391 | MS.gene05030:intron | 25.0% |
AAATGATGAATCTTGTGACT+TGG | + | chr3.4:66105767-66105786 | MS.gene05030:intron | 30.0% | |
AAGATGAGGAATATAACCTA+AGG | - | chr3.4:66106074-66106093 | None:intergenic | 30.0% | |
ACCAAAGAAGATATTACCTA+AGG | - | chr3.4:66107915-66107934 | None:intergenic | 30.0% | |
AGTCAATTACACTGATAGAT+TGG | - | chr3.4:66105471-66105490 | None:intergenic | 30.0% | |
ATAATGAAGCGAGATAAATG+AGG | + | chr3.4:66105908-66105927 | MS.gene05030:intron | 30.0% | |
ATAATTACCTTTCCAGATCA+TGG | - | chr3.4:66104242-66104261 | None:intergenic | 30.0% | |
ATATGATTTCACTGAAAACC+TGG | + | chr3.4:66105578-66105597 | MS.gene05030:CDS | 30.0% | |
ATCATATGATGACTCACAAA+TGG | + | chr3.4:66104588-66104607 | MS.gene05030:intron | 30.0% | |
ATTGAATTGCAGAAACACAA+TGG | - | chr3.4:66104265-66104284 | None:intergenic | 30.0% | |
CCAAAGAAGATATTACCTAA+GGG | - | chr3.4:66107914-66107933 | None:intergenic | 30.0% | |
GAATTGGTTAAAGAAAAGTG+TGG | - | chr3.4:66104808-66104827 | None:intergenic | 30.0% | |
GATTTCTTTCTTTAGTGATC+TGG | + | chr3.4:66103147-66103166 | MS.gene05030:intron | 30.0% | |
TAAGTACGTAACCATAAAGA+GGG | - | chr3.4:66106760-66106779 | None:intergenic | 30.0% | |
TAATCTTAAAACATGGACCA+TGG | - | chr3.4:66103098-66103117 | None:intergenic | 30.0% | |
TAGGTAATATCTTCTTTGGT+GGG | + | chr3.4:66107915-66107934 | MS.gene05030:CDS | 30.0% | |
TATGATTTCACTGAAAACCT+GGG | + | chr3.4:66105579-66105598 | MS.gene05030:CDS | 30.0% | |
TATTGTGATACTAATAGCAC+TGG | - | chr3.4:66104645-66104664 | None:intergenic | 30.0% | |
TCATATGATGACTCACAAAT+GGG | + | chr3.4:66104589-66104608 | MS.gene05030:intron | 30.0% | |
TCTTTATGGTTACGTACTTA+GGG | + | chr3.4:66106760-66106779 | MS.gene05030:intron | 30.0% | |
TGCATTGTAATCATGAACTT+TGG | + | chr3.4:66104049-66104068 | MS.gene05030:intron | 30.0% | |
TGTTGGAGAAAAAGAGTTTA+GGG | - | chr3.4:66102645-66102664 | None:intergenic | 30.0% | |
TTAGGTAATATCTTCTTTGG+TGG | + | chr3.4:66107914-66107933 | MS.gene05030:CDS | 30.0% | |
TTGATTTATGTGTGGGATTT+AGG | + | chr3.4:66102770-66102789 | MS.gene05030:intron | 30.0% | |
TTGTTGGAGAAAAAGAGTTT+AGG | - | chr3.4:66102646-66102665 | None:intergenic | 30.0% | |
! | AACTTTCAAGAGAATTTTGG+AGG | + | chr3.4:66104495-66104514 | MS.gene05030:CDS | 30.0% |
! | AATGTCAAAAAGCATACAAC+TGG | - | chr3.4:66104431-66104450 | None:intergenic | 30.0% |
! | AGATATCTTTGGGAAAAACA+AGG | + | chr3.4:66108016-66108035 | MS.gene05030:CDS | 30.0% |
! | ATTTTATTCTGTTAGGCTCA+TGG | + | chr3.4:66105046-66105065 | MS.gene05030:intron | 30.0% |
! | CATAGTGAGGTTTTACAAAA+TGG | - | chr3.4:66106799-66106818 | None:intergenic | 30.0% |
! | GATTTTTGTGTATAATGGTC+AGG | + | chr3.4:66103638-66103657 | MS.gene05030:intron | 30.0% |
! | TTCTTTGTTGATTACTTTCC+AGG | + | chr3.4:66104118-66104137 | MS.gene05030:intron | 30.0% |
!! | TGAAATTCGACAAAGTGTTT+TGG | + | chr3.4:66107022-66107041 | MS.gene05030:CDS | 30.0% |
!! | TGATTTGGTTGGAAAATCAA+TGG | + | chr3.4:66107865-66107884 | MS.gene05030:CDS | 30.0% |
!! | TGTATGCTTTTTGACATTGA+TGG | + | chr3.4:66104433-66104452 | MS.gene05030:CDS | 30.0% |
!! | TGTTACTCTTATGATTTGGT+TGG | + | chr3.4:66107854-66107873 | MS.gene05030:CDS | 30.0% |
!! | TTTGCAAGAGCATTTATAAC+TGG | - | chr3.4:66106289-66106308 | None:intergenic | 30.0% |
!!! | AAGCAAACTTTTAAGATACG+GGG | - | chr3.4:66107721-66107740 | None:intergenic | 30.0% |
!!! | GGATTTTTTTGTTAGTCCTT+AGG | + | chr3.4:66106055-66106074 | MS.gene05030:intron | 30.0% |
!!! | TTTGCTTTTAGGATTCCAAT+AGG | - | chr3.4:66106916-66106935 | None:intergenic | 30.0% |
AAAAGTCAGGTTCTCAAAGT+TGG | - | chr3.4:66107762-66107781 | None:intergenic | 35.0% | |
AAAAGTTAGTCCCTATAGAC+TGG | - | chr3.4:66107480-66107499 | None:intergenic | 35.0% | |
AAAATAGCCACATGCATAAG+AGG | - | chr3.4:66107082-66107101 | None:intergenic | 35.0% | |
AAACTGAGACGATCTAAACT+TGG | - | chr3.4:66107521-66107540 | None:intergenic | 35.0% | |
AACAGTGTAAGCAATACTTC+AGG | - | chr3.4:66106201-66106220 | None:intergenic | 35.0% | |
AACATGAGAGGTTAACTTAC+TGG | - | chr3.4:66107252-66107271 | None:intergenic | 35.0% | |
AACTGAGACGATCTAAACTT+GGG | - | chr3.4:66107520-66107539 | None:intergenic | 35.0% | |
AACTTAAACGAGAGAAGATG+AGG | - | chr3.4:66106088-66106107 | None:intergenic | 35.0% | |
AAGTACGTAACCATAAAGAG+GGG | - | chr3.4:66106759-66106778 | None:intergenic | 35.0% | |
ACAGTCTTTAAACACACTTG+TGG | - | chr3.4:66103430-66103449 | None:intergenic | 35.0% | |
ACTTTCCTCTTCAAATTTCG+AGG | + | chr3.4:66108092-66108111 | MS.gene05030:CDS | 35.0% | |
AGGTAATATCTTCTTTGGTG+GGG | + | chr3.4:66107916-66107935 | MS.gene05030:CDS | 35.0% | |
AGTTTGTAATGAGAATCCCT+TGG | + | chr3.4:66104149-66104168 | MS.gene05030:CDS | 35.0% | |
ATATATGCAGAATGGAAGCT+TGG | + | chr3.4:66105539-66105558 | MS.gene05030:CDS | 35.0% | |
ATGTTCACGACTTAACTACT+TGG | + | chr3.4:66106352-66106371 | MS.gene05030:intron | 35.0% | |
ATTGGAACGTAAAGCCTAAA+TGG | - | chr3.4:66105453-66105472 | None:intergenic | 35.0% | |
CAACACACAAACAAAAAGTC+AGG | - | chr3.4:66107775-66107794 | None:intergenic | 35.0% | |
CATATCCTCGAAATTTGAAG+AGG | - | chr3.4:66108100-66108119 | None:intergenic | 35.0% | |
CCATCTCTCAAAAGAAATAG+AGG | - | chr3.4:66107679-66107698 | None:intergenic | 35.0% | |
CCCTTAGGTAATATCTTCTT+TGG | + | chr3.4:66107911-66107930 | MS.gene05030:CDS | 35.0% | |
CGGTTCAAAATTAGAGAAGT+CGG | - | chr3.4:66107352-66107371 | None:intergenic | 35.0% | |
CTAACCATCGAGAAAATTGT+TGG | - | chr3.4:66102662-66102681 | None:intergenic | 35.0% | |
CTAAGTACGTAACCATAAAG+AGG | - | chr3.4:66106761-66106780 | None:intergenic | 35.0% | |
CTAATGTTGTGTTTGAGTGA+TGG | + | chr3.4:66102829-66102848 | MS.gene05030:intron | 35.0% | |
CTCTTTATGGTTACGTACTT+AGG | + | chr3.4:66106759-66106778 | MS.gene05030:intron | 35.0% | |
CTTAATCTCTACCTTAGTTG+TGG | - | chr3.4:66105412-66105431 | None:intergenic | 35.0% | |
CTTACACTATATCGTACAAG+CGG | + | chr3.4:66104195-66104214 | MS.gene05030:CDS | 35.0% | |
GAAGTCATCTAGTAATTCAC+AGG | - | chr3.4:66105975-66105994 | None:intergenic | 35.0% | |
GACAGAATGTTGTCAAATAG+TGG | + | chr3.4:66103304-66103323 | MS.gene05030:intron | 35.0% | |
GCAATGGTATATATGCAGAA+TGG | + | chr3.4:66105531-66105550 | MS.gene05030:CDS | 35.0% | |
GCACCAATAACTATAACTGA+CGG | - | chr3.4:66103704-66103723 | None:intergenic | 35.0% | |
GCTATCATAACTGTTCCTAT+TGG | + | chr3.4:66106898-66106917 | MS.gene05030:CDS | 35.0% | |
GGATTCGCAATTTAATAGCT+AGG | + | chr3.4:66105203-66105222 | MS.gene05030:intron | 35.0% | |
GTAAGGAATCTCTTACTACA+GGG | - | chr3.4:66107290-66107309 | None:intergenic | 35.0% | |
GTTTCTGCAATTTCAGATCT+TGG | + | chr3.4:66106973-66106992 | MS.gene05030:CDS | 35.0% | |
TAAAAGGGGAATGAGCATAT+AGG | - | chr3.4:66102695-66102714 | None:intergenic | 35.0% | |
TAACCATAAAGAGGGGATAA+AGG | - | chr3.4:66106752-66106771 | None:intergenic | 35.0% | |
TATATGACCATGATCTGGAA+AGG | + | chr3.4:66104232-66104251 | MS.gene05030:CDS | 35.0% | |
TATGTTAATTGCAGGCAACA+AGG | + | chr3.4:66105490-66105509 | MS.gene05030:intron | 35.0% | |
TATTTCCACCGACATAATTC+AGG | - | chr3.4:66103829-66103848 | None:intergenic | 35.0% | |
TCAGTATCTTGTGTCACATT+GGG | + | chr3.4:66107808-66107827 | MS.gene05030:CDS | 35.0% | |
TCAGTTATAGTTATTGGTGC+TGG | + | chr3.4:66103704-66103723 | MS.gene05030:CDS | 35.0% | |
TCTCATGTCATTGGGTTATT+AGG | + | chr3.4:66106028-66106047 | MS.gene05030:intron | 35.0% | |
TCTGCTAGACATGAAACATT+AGG | + | chr3.4:66108064-66108083 | MS.gene05030:CDS | 35.0% | |
TGAAATCATATCAGCATCAG+CGG | - | chr3.4:66105569-66105588 | None:intergenic | 35.0% | |
TGTAAGGAATCTCTTACTAC+AGG | - | chr3.4:66107291-66107310 | None:intergenic | 35.0% | |
TGTATGAGCAAGTGATTGAA+TGG | - | chr3.4:66104934-66104953 | None:intergenic | 35.0% | |
TGTCTTATATGACCATGATC+TGG | + | chr3.4:66104227-66104246 | MS.gene05030:CDS | 35.0% | |
TGTGGGATTTAGGAATTTGT+TGG | + | chr3.4:66102780-66102799 | MS.gene05030:intron | 35.0% | |
TGTTGTGATACTAATAGGAC+TGG | - | chr3.4:66104746-66104765 | None:intergenic | 35.0% | |
TTATAGGAACATGTACTCTC+TGG | + | chr3.4:66106232-66106251 | MS.gene05030:intron | 35.0% | |
TTCAATCACTTGCTCATACA+CGG | + | chr3.4:66104934-66104953 | MS.gene05030:intron | 35.0% | |
TTCAGTATCTTGTGTCACAT+TGG | + | chr3.4:66107807-66107826 | MS.gene05030:CDS | 35.0% | |
TTGTAAAACCTCACTATGCA+GGG | + | chr3.4:66106801-66106820 | MS.gene05030:intron | 35.0% | |
TTTCCTTTATCCCCTCTTTA+TGG | + | chr3.4:66106746-66106765 | MS.gene05030:intron | 35.0% | |
TTTGTAAAACCTCACTATGC+AGG | + | chr3.4:66106800-66106819 | MS.gene05030:intron | 35.0% | |
! | ATTCATACTGACTACTCGTT+TGG | + | chr3.4:66103934-66103953 | MS.gene05030:CDS | 35.0% |
! | CAATCCGGTTCTTGTTTATA+TGG | + | chr3.4:66107125-66107144 | MS.gene05030:CDS | 35.0% |
! | TGATCTTTGAAAAGATGGCT+TGG | - | chr3.4:66107414-66107433 | None:intergenic | 35.0% |
! | TTAGTGATCTGGAATCTAGA+TGG | + | chr3.4:66103158-66103177 | MS.gene05030:intron | 35.0% |
! | TTCTCCAACAATTTTCTCGA+TGG | + | chr3.4:66102655-66102674 | MS.gene05030:CDS | 35.0% |
! | TTTTACCTGAATTATGTCGG+TGG | + | chr3.4:66103821-66103840 | MS.gene05030:intron | 35.0% |
!! | AGAAGTGCTTATTACTCTCT+TGG | - | chr3.4:66106456-66106475 | None:intergenic | 35.0% |
!! | AGGACTGGTTCATACATAAA+TGG | - | chr3.4:66104731-66104750 | None:intergenic | 35.0% |
!! | ATCATGAACTTTGGAGTTAG+TGG | + | chr3.4:66104058-66104077 | MS.gene05030:intron | 35.0% |
!! | ATGGTTTGTTTCTCATGTGT+TGG | + | chr3.4:66103600-66103619 | MS.gene05030:intron | 35.0% |
!! | CCTCTATTTCTTTTGAGAGA+TGG | + | chr3.4:66107676-66107695 | MS.gene05030:intron | 35.0% |
!! | CTGACTTTTTGTTTGTGTGT+TGG | + | chr3.4:66107773-66107792 | MS.gene05030:intron | 35.0% |
!! | GCATTGAACTTGTTTCTAGT+GGG | + | chr3.4:66102980-66102999 | MS.gene05030:intron | 35.0% |
!! | TCATGAACTTTGGAGTTAGT+GGG | + | chr3.4:66104059-66104078 | MS.gene05030:intron | 35.0% |
!! | TGCATTGAACTTGTTTCTAG+TGG | + | chr3.4:66102979-66102998 | MS.gene05030:intron | 35.0% |
!! | TGGGTGTTACTCTTATGATT+TGG | + | chr3.4:66107850-66107869 | MS.gene05030:CDS | 35.0% |
!! | TGGTTTGTTTCTCATGTGTT+GGG | + | chr3.4:66103601-66103620 | MS.gene05030:intron | 35.0% |
!! | TTATTTTGCAAGCATACCTG+TGG | - | chr3.4:66106333-66106352 | None:intergenic | 35.0% |
!! | TTTCAAGAGAATTTTGGAGG+AGG | + | chr3.4:66104498-66104517 | MS.gene05030:CDS | 35.0% |
!! | TTTTCATTTGTCGTTTGGTC+AGG | + | chr3.4:66103873-66103892 | MS.gene05030:intron | 35.0% |
!!! | TGCAATTGTTGACTCTTTTC+AGG | + | chr3.4:66103493-66103512 | MS.gene05030:intron | 35.0% |
AAATAGAGGACTCCATTTGC+GGG | - | chr3.4:66107665-66107684 | None:intergenic | 40.0% | |
ACACCTTAAAAGATGCATCG+TGG | - | chr3.4:66103760-66103779 | None:intergenic | 40.0% | |
AGCAAATTGAACTTACCACG+AGG | - | chr3.4:66103980-66103999 | None:intergenic | 40.0% | |
AGTTAACCTCTCATGTTGTC+CGG | + | chr3.4:66107255-66107274 | MS.gene05030:intron | 40.0% | |
ATAACTATAACTGACGGAGC+TGG | - | chr3.4:66103698-66103717 | None:intergenic | 40.0% | |
ATACCATTGCAGCACTTCAT+GGG | - | chr3.4:66105521-66105540 | None:intergenic | 40.0% | |
ATCTCTTACTACAGGGACTA+TGG | - | chr3.4:66107283-66107302 | None:intergenic | 40.0% | |
ATTACAAACTCCATGTAGCC+TGG | - | chr3.4:66104139-66104158 | None:intergenic | 40.0% | |
ATTGCAGAAACCTTCCAATC+AGG | - | chr3.4:66106964-66106983 | None:intergenic | 40.0% | |
CAGTATCTTGTGTCACATTG+GGG | + | chr3.4:66107809-66107828 | MS.gene05030:CDS | 40.0% | |
CGATTTCAATTGTGCTGGAT+AGG | + | chr3.4:66105383-66105402 | MS.gene05030:CDS | 40.0% | |
CTCAATCTCCATAAAGCAAC+AGG | + | chr3.4:66107102-66107121 | MS.gene05030:CDS | 40.0% | |
CTGCAGATTGTGTGAATGTA+AGG | - | chr3.4:66107307-66107326 | None:intergenic | 40.0% | |
CTGCTATGCTCATCTATGTT+TGG | - | chr3.4:66104023-66104042 | None:intergenic | 40.0% | |
GAAATAGAGGACTCCATTTG+CGG | - | chr3.4:66107666-66107685 | None:intergenic | 40.0% | |
GAACAGATCCAAACTCTCTT+GGG | + | chr3.4:66107831-66107850 | MS.gene05030:CDS | 40.0% | |
GAGTCAACAATTGCAAGTTC+AGG | - | chr3.4:66103488-66103507 | None:intergenic | 40.0% | |
GATATCTAGTGGCTACAACA+AGG | + | chr3.4:66106831-66106850 | MS.gene05030:CDS | 40.0% | |
GCTCCGTCAGTTATAGTTAT+TGG | + | chr3.4:66103698-66103717 | MS.gene05030:CDS | 40.0% | |
GCTGCCATATAAACAAGAAC+CGG | - | chr3.4:66107132-66107151 | None:intergenic | 40.0% | |
GGATTTCTGACCAGTCTATA+GGG | + | chr3.4:66107467-66107486 | MS.gene05030:intron | 40.0% | |
GGGATGGACACATGAAATAT+TGG | - | chr3.4:66107641-66107660 | None:intergenic | 40.0% | |
GTAATTCACAGGTGATCTCA+AGG | - | chr3.4:66105964-66105983 | None:intergenic | 40.0% | |
GTCATTGGGTTATTAGGAGA+AGG | + | chr3.4:66106034-66106053 | MS.gene05030:intron | 40.0% | |
GTTGTAGCCACTAGATATCT+TGG | - | chr3.4:66106830-66106849 | None:intergenic | 40.0% | |
TACTCTCTTGGCTTCAAACA+TGG | - | chr3.4:66106444-66106463 | None:intergenic | 40.0% | |
TAGTGGCTACAACAAGGTAA+TGG | + | chr3.4:66106837-66106856 | MS.gene05030:CDS | 40.0% | |
TATACCATTGCAGCACTTCA+TGG | - | chr3.4:66105522-66105541 | None:intergenic | 40.0% | |
TATTGTCACAGTGCAGCAAA+TGG | + | chr3.4:66105231-66105250 | MS.gene05030:intron | 40.0% | |
TCAATCACTTGCTCATACAC+GGG | + | chr3.4:66104935-66104954 | MS.gene05030:intron | 40.0% | |
TCAGAAACTGAAATGTCCTC+AGG | - | chr3.4:66105361-66105380 | None:intergenic | 40.0% | |
TGAAGCGATTTCAATTGTGC+TGG | + | chr3.4:66105378-66105397 | MS.gene05030:CDS | 40.0% | |
TGATTACTTTCCAGGCTACA+TGG | + | chr3.4:66104126-66104145 | MS.gene05030:intron | 40.0% | |
TGGATTTCTGACCAGTCTAT+AGG | + | chr3.4:66107466-66107485 | MS.gene05030:intron | 40.0% | |
TTGAACCAAGACTTCCTGAT+TGG | + | chr3.4:66106947-66106966 | MS.gene05030:CDS | 40.0% | |
TTGATATACGCTTGAACCAC+AGG | + | chr3.4:66106314-66106333 | MS.gene05030:CDS | 40.0% | |
TTTGGTTGTCCAGTTGACAT+GGG | + | chr3.4:66103952-66103971 | MS.gene05030:CDS | 40.0% | |
TTTGTGTGTTGGACTAATGC+AGG | + | chr3.4:66107784-66107803 | MS.gene05030:intron | 40.0% | |
! | ACCGCTGATCTTTGAAAAGA+TGG | - | chr3.4:66107419-66107438 | None:intergenic | 40.0% |
! | ACTGCAGTTGTAGTTTTTGC+TGG | + | chr3.4:66103125-66103144 | MS.gene05030:intron | 40.0% |
! | CAACAAGGTAATGGTTACCT+TGG | + | chr3.4:66106846-66106865 | MS.gene05030:CDS | 40.0% |
! | GCAATTTCAGATCTTGGTGT+AGG | + | chr3.4:66106979-66106998 | MS.gene05030:CDS | 40.0% |
! | GCCATCTTTTCAAAGATCAG+CGG | + | chr3.4:66107415-66107434 | MS.gene05030:intron | 40.0% |
! | GTTCTTGTTTATATGGCAGC+TGG | + | chr3.4:66107132-66107151 | MS.gene05030:CDS | 40.0% |
! | TCTCCACGATGCATCTTTTA+AGG | + | chr3.4:66103754-66103773 | MS.gene05030:CDS | 40.0% |
!! | AGGCGTGTAAGATCTTGTTT+TGG | - | chr3.4:66106112-66106131 | None:intergenic | 40.0% |
!! | CTTGTTTCTAGTGGGATGTT+TGG | + | chr3.4:66102988-66103007 | MS.gene05030:intron | 40.0% |
!! | TTATTGGTGCTGGAATCTCA+GGG | + | chr3.4:66103714-66103733 | MS.gene05030:CDS | 40.0% |
!!! | CTTTTAAGATACGGGGAGAA+AGG | - | chr3.4:66107714-66107733 | None:intergenic | 40.0% |
AAAGTTTCTGCCATCCTCCA+AGG | - | chr3.4:66106866-66106885 | None:intergenic | 45.0% | |
ACACCCATAAGTTCTACGTC+AGG | - | chr3.4:66107048-66107067 | None:intergenic | 45.0% | |
ACCAAGACTTCCTGATTGGA+AGG | + | chr3.4:66106951-66106970 | MS.gene05030:CDS | 45.0% | |
ACCTTCCAATCAGGAAGTCT+TGG | - | chr3.4:66106955-66106974 | None:intergenic | 45.0% | |
ACCTTCTGATAACTGCAGAC+AGG | + | chr3.4:66105316-66105335 | MS.gene05030:intron | 45.0% | |
AGCTATGAGCTTAGACAACC+AGG | + | chr3.4:66107940-66107959 | MS.gene05030:CDS | 45.0% | |
AGCTTATTCTGCTGGGGTTA+TGG | + | chr3.4:66107976-66107995 | MS.gene05030:CDS | 45.0% | |
AGGGTGACCAAGATATCTAG+TGG | + | chr3.4:66106820-66106839 | MS.gene05030:intron | 45.0% | |
ATGTACTCTCTGGTGGTCAT+GGG | + | chr3.4:66106242-66106261 | MS.gene05030:CDS | 45.0% | |
CAACGTATCAATGGAGCCAA+GGG | - | chr3.4:66104168-66104187 | None:intergenic | 45.0% | |
CCATAAAGCAACAGGCAATC+CGG | + | chr3.4:66107110-66107129 | MS.gene05030:CDS | 45.0% | |
CCTCGTCAGATAACTTCTCA+AGG | - | chr3.4:66107173-66107192 | None:intergenic | 45.0% | |
CCTTCTGATAACTGCAGACA+GGG | + | chr3.4:66105317-66105336 | MS.gene05030:intron | 45.0% | |
CCTTGAGAAGTTATCTGACG+AGG | + | chr3.4:66107170-66107189 | MS.gene05030:CDS | 45.0% | |
CGATCTAAACTTGGGCAATG+AGG | - | chr3.4:66107512-66107531 | None:intergenic | 45.0% | |
CTATGAGCTTAGACAACCAG+GGG | + | chr3.4:66107942-66107961 | MS.gene05030:CDS | 45.0% | |
CTTGGGCAATGAGGATAGTA+TGG | - | chr3.4:66107503-66107522 | None:intergenic | 45.0% | |
GAGTAACACCCAAGAGAGTT+TGG | - | chr3.4:66107842-66107861 | None:intergenic | 45.0% | |
GCTATGAGCTTAGACAACCA+GGG | + | chr3.4:66107941-66107960 | MS.gene05030:CDS | 45.0% | |
GGAACAGATCCAAACTCTCT+TGG | + | chr3.4:66107830-66107849 | MS.gene05030:CDS | 45.0% | |
GTAATGGTTACCTTGGAGGA+TGG | + | chr3.4:66106853-66106872 | MS.gene05030:CDS | 45.0% | |
GTCTAGCAGAAACTTGAGAC+AGG | - | chr3.4:66108054-66108073 | None:intergenic | 45.0% | |
GTTTGGTTGTCCAGTTGACA+TGG | + | chr3.4:66103951-66103970 | MS.gene05030:CDS | 45.0% | |
TACGATATAGTGTAAGCCCC+AGG | - | chr3.4:66104191-66104210 | None:intergenic | 45.0% | |
TACTACAGGGACTATGGATC+CGG | - | chr3.4:66107277-66107296 | None:intergenic | 45.0% | |
TAGCCACATGCATAAGAGGT+AGG | - | chr3.4:66107078-66107097 | None:intergenic | 45.0% | |
TAGGAACATGTACTCTCTGG+TGG | + | chr3.4:66106235-66106254 | MS.gene05030:intron | 45.0% | |
TCTTCTTGTCCCCAGTAGAT+GGG | - | chr3.4:66103033-66103052 | None:intergenic | 45.0% | |
TGCATGGAGCTTATTCTGCT+GGG | + | chr3.4:66107969-66107988 | MS.gene05030:CDS | 45.0% | |
TGGAGTTAGTGGGATGAGTA+AGG | + | chr3.4:66104069-66104088 | MS.gene05030:intron | 45.0% | |
TGGATAGGCATCCACAACTA+AGG | + | chr3.4:66105398-66105417 | MS.gene05030:CDS | 45.0% | |
TGGCCTGACGTAGAACTTAT+GGG | + | chr3.4:66107042-66107061 | MS.gene05030:CDS | 45.0% | |
TTCACTGAAAACCTGGGATC+AGG | + | chr3.4:66105585-66105604 | MS.gene05030:CDS | 45.0% | |
TTGGCCTGACGTAGAACTTA+TGG | + | chr3.4:66107041-66107060 | MS.gene05030:CDS | 45.0% | |
TTGTTTATATGGCAGCTGGC+AGG | + | chr3.4:66107136-66107155 | MS.gene05030:CDS | 45.0% | |
! | AAGTTGTCAATCGCGGATTG+CGG | - | chr3.4:66103385-66103404 | None:intergenic | 45.0% |
! | ATTTTTCCGGAGCTCATGAG+TGG | + | chr3.4:66103221-66103240 | MS.gene05030:intron | 45.0% |
! | CAAGGTAATGGTTACCTTGG+AGG | + | chr3.4:66106849-66106868 | MS.gene05030:CDS | 45.0% |
! | GTTTGGTCAGGTCACTCTTT+TGG | + | chr3.4:66103885-66103904 | MS.gene05030:intron | 45.0% |
! | TGCTGACTGTGTGAATGTAG+TGG | + | chr3.4:66107446-66107465 | MS.gene05030:intron | 45.0% |
!! | GTTATTGGTGCTGGAATCTC+AGG | + | chr3.4:66103713-66103732 | MS.gene05030:CDS | 45.0% |
!! | TTTCCCATGAAGTGCTGCAA+TGG | + | chr3.4:66105515-66105534 | MS.gene05030:CDS | 45.0% |
!!! | CTCTTTTGGAGTCACGAGAT+AGG | + | chr3.4:66103899-66103918 | MS.gene05030:CDS | 45.0% |
!! | CAAATTAATAATATTAATAA+CGG | - | chr3.4:66105282-66105301 | None:intergenic | 5.0% |
!! | TAAATCAAATAATATTAAAA+GGG | - | chr3.4:66102710-66102729 | None:intergenic | 5.0% |
AACTGCAGACAGGGAAAGTG+AGG | + | chr3.4:66105326-66105345 | MS.gene05030:intron | 50.0% | |
ACAGTGCAGCAAATGGCTAG+TGG | + | chr3.4:66105238-66105257 | MS.gene05030:intron | 50.0% | |
ACTGCAGACAGGGAAAGTGA+GGG | + | chr3.4:66105327-66105346 | MS.gene05030:intron | 50.0% | |
ACTTCAATGACCGTCTGCTG+TGG | - | chr3.4:66104469-66104488 | None:intergenic | 50.0% | |
ATGGATCCGGACAACATGAG+AGG | - | chr3.4:66107264-66107283 | None:intergenic | 50.0% | |
CAGCAGACGGTCATTGAAGT+TGG | + | chr3.4:66104469-66104488 | MS.gene05030:CDS | 50.0% | |
CATGTACTCTCTGGTGGTCA+TGG | + | chr3.4:66106241-66106260 | MS.gene05030:CDS | 50.0% | |
CATTCACCACTCATGAGCTC+CGG | - | chr3.4:66103230-66103249 | None:intergenic | 50.0% | |
CCAGGGTAAGTTGTCAATCG+CGG | - | chr3.4:66103392-66103411 | None:intergenic | 50.0% | |
CCATCAAGTTCCACAGCAGA+CGG | + | chr3.4:66104456-66104475 | MS.gene05030:CDS | 50.0% | |
CCCTGTCTGCAGTTATCAGA+AGG | - | chr3.4:66105320-66105339 | None:intergenic | 50.0% | |
CTCCATTGATACGTTGCCTG+GGG | + | chr3.4:66104172-66104191 | MS.gene05030:CDS | 50.0% | |
CTTCTTGTCCCCAGTAGATG+GGG | - | chr3.4:66103032-66103051 | None:intergenic | 50.0% | |
GCAACGTATCAATGGAGCCA+AGG | - | chr3.4:66104169-66104188 | None:intergenic | 50.0% | |
GCATGGAGCTTATTCTGCTG+GGG | + | chr3.4:66107970-66107989 | MS.gene05030:CDS | 50.0% | |
GCCATAGCACTGTTGCATAG+CGG | + | chr3.4:66103337-66103356 | MS.gene05030:intron | 50.0% | |
GCTATGCAACAGTGCTATGG+CGG | - | chr3.4:66103338-66103357 | None:intergenic | 50.0% | |
GCTCCATTGATACGTTGCCT+GGG | + | chr3.4:66104171-66104190 | MS.gene05030:CDS | 50.0% | |
GCTCCTACCTCTTATGCATG+TGG | + | chr3.4:66107072-66107091 | MS.gene05030:CDS | 50.0% | |
GTCTTCTTGTCCCCAGTAGA+TGG | - | chr3.4:66103034-66103053 | None:intergenic | 50.0% | |
GTGCATGGAGCTTATTCTGC+TGG | + | chr3.4:66107968-66107987 | MS.gene05030:CDS | 50.0% | |
TCCGCTATGCAACAGTGCTA+TGG | - | chr3.4:66103341-66103360 | None:intergenic | 50.0% | |
TGACAACTTACCCTGGACTC+TGG | + | chr3.4:66103396-66103415 | MS.gene05030:intron | 50.0% | |
TTGGAGTCACGAGATAGGCT+TGG | + | chr3.4:66103904-66103923 | MS.gene05030:CDS | 50.0% | |
! | AGTTGTCAATCGCGGATTGC+GGG | - | chr3.4:66103384-66103403 | None:intergenic | 50.0% |
! | TTCAAAGATCAGCGGTGCTG+AGG | + | chr3.4:66107423-66107442 | MS.gene05030:intron | 50.0% |
!! | CCGGATTGCCTGTTGCTTTA+TGG | - | chr3.4:66107113-66107132 | None:intergenic | 50.0% |
!! | CTTACTGGCTCACAAGCATC+AGG | - | chr3.4:66107237-66107256 | None:intergenic | 50.0% |
AATGGCACTTGCCTGATCCC+AGG | - | chr3.4:66105599-66105618 | None:intergenic | 55.0% | |
AGAGGACTCCATTTGCGGGA+GGG | - | chr3.4:66107661-66107680 | None:intergenic | 55.0% | |
AGCCCCAGGCAACGTATCAA+TGG | - | chr3.4:66104177-66104196 | None:intergenic | 55.0% | |
AGTGAGGGATGAGCATCCTG+AGG | + | chr3.4:66105342-66105361 | MS.gene05030:CDS | 55.0% | |
ATGCAGCTGACCCCATCTAC+TGG | + | chr3.4:66103019-66103038 | MS.gene05030:intron | 55.0% | |
CCGCGATTGACAACTTACCC+TGG | + | chr3.4:66103389-66103408 | MS.gene05030:intron | 55.0% | |
CCGTCTGCTGTGGAACTTGA+TGG | - | chr3.4:66104459-66104478 | None:intergenic | 55.0% | |
CTTGGTCACCCTGCATAGTG+AGG | - | chr3.4:66106812-66106831 | None:intergenic | 55.0% | |
GACAAGCTTCGTGCACCCTT+AGG | + | chr3.4:66107896-66107915 | MS.gene05030:CDS | 55.0% | |
GAGTCACGAGATAGGCTTGG+TGG | + | chr3.4:66103907-66103926 | MS.gene05030:CDS | 55.0% | |
GGCTCCATTGATACGTTGCC+TGG | + | chr3.4:66104170-66104189 | MS.gene05030:CDS | 55.0% | |
GGTATGCACTCCAGAGTCCA+GGG | - | chr3.4:66103409-66103428 | None:intergenic | 55.0% | |
TAGAGGACTCCATTTGCGGG+AGG | - | chr3.4:66107662-66107681 | None:intergenic | 55.0% | |
TGCAGCTGACCCCATCTACT+GGG | + | chr3.4:66103020-66103039 | MS.gene05030:intron | 55.0% | |
TGGTATGCACTCCAGAGTCC+AGG | - | chr3.4:66103410-66103429 | None:intergenic | 55.0% | |
! | GTTGTCAATCGCGGATTGCG+GGG | - | chr3.4:66103383-66103402 | None:intergenic | 55.0% |
!! | CTGACGGAGCTGGTCTTTGT+TGG | - | chr3.4:66103688-66103707 | None:intergenic | 55.0% |
AAGCTCCATGCACAGACCCC+TGG | - | chr3.4:66107961-66107980 | None:intergenic | 60.0% | |
ACAGTGCTATGGCGGCGCTA+TGG | - | chr3.4:66103330-66103349 | None:intergenic | 60.0% | |
CACGAGGCTCCCATGTCAAC+TGG | - | chr3.4:66103964-66103983 | None:intergenic | 60.0% | |
CAGTTGACATGGGAGCCTCG+TGG | + | chr3.4:66103962-66103981 | MS.gene05030:CDS | 60.0% | |
CTCTGGTGGTCATGGGCTCA+TGG | + | chr3.4:66106249-66106268 | MS.gene05030:CDS | 60.0% | |
GACAACCAGGGGTCTGTGCA+TGG | + | chr3.4:66107953-66107972 | MS.gene05030:CDS | 60.0% | |
GACTCCATTTGCGGGAGGGA+TGG | - | chr3.4:66107657-66107676 | None:intergenic | 60.0% | |
GCAGCTGACCCCATCTACTG+GGG | + | chr3.4:66103021-66103040 | MS.gene05030:intron | 60.0% | |
GGTCATGGGCTCATGGTGCA+AGG | + | chr3.4:66106256-66106275 | MS.gene05030:CDS | 60.0% | |
GTGTCCATCCCTCCCGCAAA+TGG | + | chr3.4:66107650-66107669 | MS.gene05030:intron | 60.0% | |
! | TCGCGGATTGCGGGGAAAAG+CGG | - | chr3.4:66103375-66103394 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 66102637 | 66108120 | 66102637 | ID=MS.gene05030 |
chr3.4 | mRNA | 66102637 | 66108120 | 66102637 | ID=MS.gene05030.t1;Parent=MS.gene05030 |
chr3.4 | exon | 66102637 | 66102676 | 66102637 | ID=MS.gene05030.t1.exon1;Parent=MS.gene05030.t1 |
chr3.4 | CDS | 66102637 | 66102676 | 66102637 | ID=cds.MS.gene05030.t1;Parent=MS.gene05030.t1 |
chr3.4 | exon | 66103660 | 66103775 | 66103660 | ID=MS.gene05030.t1.exon2;Parent=MS.gene05030.t1 |
chr3.4 | CDS | 66103660 | 66103775 | 66103660 | ID=cds.MS.gene05030.t1;Parent=MS.gene05030.t1 |
chr3.4 | exon | 66103895 | 66103983 | 66103895 | ID=MS.gene05030.t1.exon3;Parent=MS.gene05030.t1 |
chr3.4 | CDS | 66103895 | 66103983 | 66103895 | ID=cds.MS.gene05030.t1;Parent=MS.gene05030.t1 |
chr3.4 | exon | 66104140 | 66104253 | 66104140 | ID=MS.gene05030.t1.exon4;Parent=MS.gene05030.t1 |
chr3.4 | CDS | 66104140 | 66104253 | 66104140 | ID=cds.MS.gene05030.t1;Parent=MS.gene05030.t1 |
chr3.4 | exon | 66104432 | 66104519 | 66104432 | ID=MS.gene05030.t1.exon5;Parent=MS.gene05030.t1 |
chr3.4 | CDS | 66104432 | 66104519 | 66104432 | ID=cds.MS.gene05030.t1;Parent=MS.gene05030.t1 |
chr3.4 | exon | 66105334 | 66105419 | 66105334 | ID=MS.gene05030.t1.exon6;Parent=MS.gene05030.t1 |
chr3.4 | CDS | 66105334 | 66105419 | 66105334 | ID=cds.MS.gene05030.t1;Parent=MS.gene05030.t1 |
chr3.4 | exon | 66105504 | 66105606 | 66105504 | ID=MS.gene05030.t1.exon7;Parent=MS.gene05030.t1 |
chr3.4 | CDS | 66105504 | 66105606 | 66105504 | ID=cds.MS.gene05030.t1;Parent=MS.gene05030.t1 |
chr3.4 | exon | 66106238 | 66106335 | 66106238 | ID=MS.gene05030.t1.exon8;Parent=MS.gene05030.t1 |
chr3.4 | CDS | 66106238 | 66106335 | 66106238 | ID=cds.MS.gene05030.t1;Parent=MS.gene05030.t1 |
chr3.4 | exon | 66106822 | 66107251 | 66106822 | ID=MS.gene05030.t1.exon9;Parent=MS.gene05030.t1 |
chr3.4 | CDS | 66106822 | 66107251 | 66106822 | ID=cds.MS.gene05030.t1;Parent=MS.gene05030.t1 |
chr3.4 | exon | 66107806 | 66108120 | 66107806 | ID=MS.gene05030.t1.exon10;Parent=MS.gene05030.t1 |
chr3.4 | CDS | 66107806 | 66108120 | 66107806 | ID=cds.MS.gene05030.t1;Parent=MS.gene05030.t1 |
Gene Sequence |
Protein sequence |