Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050761.t1 | XP_013450445.1 | 96.5 | 568 | 19 | 1 | 1 | 568 | 1 | 567 | 1.20E-301 | 1045 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050761.t1 | P56820 | 73.8 | 591 | 114 | 8 | 7 | 565 | 6 | 587 | 9.7e-231 | 800.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050761.t1 | A0A072U5R5 | 96.5 | 568 | 19 | 1 | 1 | 568 | 1 | 567 | 8.9e-302 | 1045.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050761 | MS.gene050964 | 0.996656 | 2.09E-230 | -1.69E-46 |
| MS.gene050761 | MS.gene072563 | 0.92797 | 5.58E-92 | -1.69E-46 |
| MS.gene050761 | MS.gene82382 | 0.80056 | 1.36E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050761 | MS.gene056601 | PPI |
| MS.gene050761 | MS.gene91826 | PPI |
| MS.gene050761 | MS.gene78764 | PPI |
| MS.gene050761 | MS.gene053952 | PPI |
| MS.gene050761 | MS.gene072563 | PPI |
| MS.gene050964 | MS.gene050761 | PPI |
| MS.gene050761 | MS.gene37709 | PPI |
| MS.gene050761 | MS.gene35379 | PPI |
| MS.gene050761 | MS.gene054381 | PPI |
| MS.gene05190 | MS.gene050761 | PPI |
| MS.gene43071 | MS.gene050761 | PPI |
| MS.gene042719 | MS.gene050761 | PPI |
| MS.gene073078 | MS.gene050761 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050761.t1 | MTR_7g111950 | 98.768 | 568 | 6 | 1 | 1 | 568 | 1 | 567 | 0.0 | 1158 |
| MS.gene050761.t1 | MTR_2g013930 | 42.593 | 162 | 17 | 5 | 271 | 432 | 7 | 92 | 3.81e-22 | 91.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050761.t1 | AT4G20980 | 75.382 | 589 | 110 | 9 | 6 | 565 | 5 | 587 | 0.0 | 879 |
| MS.gene050761.t1 | AT4G20980 | 75.382 | 589 | 110 | 9 | 6 | 565 | 5 | 587 | 0.0 | 879 |
| MS.gene050761.t1 | AT4G20980 | 75.382 | 589 | 110 | 9 | 6 | 565 | 5 | 587 | 0.0 | 879 |
| MS.gene050761.t1 | AT4G20980 | 75.382 | 589 | 110 | 9 | 6 | 565 | 5 | 587 | 0.0 | 879 |
| MS.gene050761.t1 | AT5G44320 | 73.005 | 589 | 128 | 9 | 6 | 568 | 5 | 588 | 0.0 | 854 |
Find 0 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAATAATGCTAATAAGT+TGG | + | 51761:51397-51416 | MS.gene050761:CDS | 20.0% |
| AGTTTGGAGAAAGTTGAAAA+CGG | - | 51761:50660-50679 | None:intergenic | 30.0% | |
| ATCTGAATCCAAACAATATG+TGG | + | 51761:51564-51583 | MS.gene050761:CDS | 30.0% | |
| ATGATATGTATCTTGTTGCT+AGG | + | 51761:51228-51247 | MS.gene050761:CDS | 30.0% | |
| TCTGAATCCAAACAATATGT+GGG | + | 51761:51565-51584 | MS.gene050761:CDS | 30.0% | |
| TTAATATCATCTTTAGCCTC+AGG | - | 51761:51038-51057 | None:intergenic | 30.0% | |
| TTCTAGGTCTGTTTATTCTT+GGG | + | 51761:50911-50930 | MS.gene050761:CDS | 30.0% | |
| TTTGATTAGAGATGGGAAAA+AGG | + | 51761:51118-51137 | MS.gene050761:CDS | 30.0% | |
| ! | TTTTCTTTGATAAGCGTGAT+GGG | + | 51761:50964-50983 | MS.gene050761:CDS | 30.0% |
| !!! | AGCAAGTTTTGATTAGAGAT+GGG | + | 51761:51111-51130 | MS.gene050761:CDS | 30.0% |
| ATAAGAAGCCTCAACACTAA+GGG | - | 51761:51072-51091 | None:intergenic | 35.0% | |
| CAATCAACACCAGAATACTT+GGG | - | 51761:51329-51348 | None:intergenic | 35.0% | |
| CAGCGTAGATAAAATAGCAT+CGG | - | 51761:50883-50902 | None:intergenic | 35.0% | |
| CATTCAACGCATTCAAAGTA+AGG | - | 51761:51298-51317 | None:intergenic | 35.0% | |
| CCTTCATTAGCAAAAGGATT+CGG | - | 51761:51158-51177 | None:intergenic | 35.0% | |
| CTGAAGATTTGAAAAGCTCA+CGG | - | 51761:50599-50618 | None:intergenic | 35.0% | |
| CTGAATCCAAACAATATGTG+GGG | + | 51761:51566-51585 | MS.gene050761:CDS | 35.0% | |
| CTTCTAGGTCTGTTTATTCT+TGG | + | 51761:50910-50929 | MS.gene050761:CDS | 35.0% | |
| CTTCTTATCTTCCACATCAT+TGG | - | 51761:51819-51838 | None:intergenic | 35.0% | |
| GTATAAACCTAAGGACTTTG+CGG | + | 51761:51532-51551 | MS.gene050761:CDS | 35.0% | |
| GTCTTGAGAGGTTTAAGAAT+AGG | + | 51761:50778-50797 | MS.gene050761:CDS | 35.0% | |
| GTTTGGAGAAAGTTGAAAAC+GGG | - | 51761:50659-50678 | None:intergenic | 35.0% | |
| TATAAGAAGCCTCAACACTA+AGG | - | 51761:51073-51092 | None:intergenic | 35.0% | |
| TCATTTCAACCATGTGATCT+TGG | + | 51761:51499-51518 | MS.gene050761:CDS | 35.0% | |
| TGAATCCAAACAATATGTGG+GGG | + | 51761:51567-51586 | MS.gene050761:CDS | 35.0% | |
| TTGTGCATGAAGTTGAATGA+GGG | + | 51761:51611-51630 | MS.gene050761:CDS | 35.0% | |
| TTGTTGATGTTAACAACCAG+AGG | + | 51761:51267-51286 | MS.gene050761:CDS | 35.0% | |
| ! | ATATTGTTGTTCAGCGTGTT+GGG | + | 51761:50934-50953 | MS.gene050761:CDS | 35.0% |
| ! | ATGCTAATAAGTTGGCTAAG+TGG | + | 51761:51405-51424 | MS.gene050761:CDS | 35.0% |
| ! | CGAATCCTTTTGCTAATGAA+GGG | + | 51761:51156-51175 | MS.gene050761:CDS | 35.0% |
| ! | CTTCTGTTGGTTATAGGTAT+AGG | + | 51761:51189-51208 | MS.gene050761:CDS | 35.0% |
| ! | CTTTTCTTTGATAAGCGTGA+TGG | + | 51761:50963-50982 | MS.gene050761:CDS | 35.0% |
| ! | GAATCCTTTTGCTAATGAAG+GGG | + | 51761:51157-51176 | MS.gene050761:CDS | 35.0% |
| !! | AGTGCTGATATGATGAAGTT+GGG | + | 51761:51449-51468 | MS.gene050761:CDS | 35.0% |
| !! | TAGTGCTGATATGATGAAGT+TGG | + | 51761:51448-51467 | MS.gene050761:CDS | 35.0% |
| !!! | CAGCAAGTTTTGATTAGAGA+TGG | + | 51761:51110-51129 | MS.gene050761:CDS | 35.0% |
| AAGATTTGAAAAGCTCACGG+CGG | - | 51761:50596-50615 | None:intergenic | 40.0% | |
| ACAATCCCCCACATATTGTT+TGG | - | 51761:51575-51594 | None:intergenic | 40.0% | |
| ACATGGTTGAAATGATCACG+AGG | - | 51761:51494-51513 | None:intergenic | 40.0% | |
| ACCTCATAAATCCTAACCTG+TGG | - | 51761:51668-51687 | None:intergenic | 40.0% | |
| ATTTGAGAACGACTATGTGG+AGG | + | 51761:51700-51719 | MS.gene050761:CDS | 40.0% | |
| CCAATCAACACCAGAATACT+TGG | - | 51761:51330-51349 | None:intergenic | 40.0% | |
| CTGATCATGCATGTTCCATT+CGG | - | 51761:50634-50653 | None:intergenic | 40.0% | |
| CTTGTGCATGAAGTTGAATG+AGG | + | 51761:51610-51629 | MS.gene050761:CDS | 40.0% | |
| GAGTTTGATCCCAAGTATTC+TGG | + | 51761:51317-51336 | MS.gene050761:CDS | 40.0% | |
| GGGGAAATATGTTCTTGTGA+AGG | + | 51761:51631-51650 | MS.gene050761:CDS | 40.0% | |
| GGTGAAATCGAAAGCAGTAT+CGG | - | 51761:50349-50368 | None:intergenic | 40.0% | |
| GTGGAAGATAAGAAGACTGA+TGG | + | 51761:51824-51843 | MS.gene050761:CDS | 40.0% | |
| TCAAAGTAAGGAAAGACCTC+TGG | - | 51761:51286-51305 | None:intergenic | 40.0% | |
| TCAAGACGACGTTCATTCTT+GGG | - | 51761:50765-50784 | None:intergenic | 40.0% | |
| TCTTCCCCTTCATTAGCAAA+AGG | - | 51761:51164-51183 | None:intergenic | 40.0% | |
| TGATCATGCATGTTCCATTC+GGG | - | 51761:50633-50652 | None:intergenic | 40.0% | |
| TGCATTTGAGAACGACTATG+TGG | + | 51761:51697-51716 | MS.gene050761:CDS | 40.0% | |
| TGTGCATGAAGTTGAATGAG+GGG | + | 51761:51612-51631 | MS.gene050761:CDS | 40.0% | |
| TGTGGTTGGGTATAAACCTA+AGG | + | 51761:51523-51542 | MS.gene050761:CDS | 40.0% | |
| TTCTGTTCATGAGACTTCTC+AGG | + | 51761:51004-51023 | MS.gene050761:CDS | 40.0% | |
| TTGGTTATAGGTATAGGAGG+TGG | + | 51761:51195-51214 | MS.gene050761:CDS | 40.0% | |
| TTTCTCAGCTTCACGTTTCT+TGG | - | 51761:50520-50539 | None:intergenic | 40.0% | |
| ! | AGGTTGCTTCTGTTGGTTAT+AGG | + | 51761:51183-51202 | MS.gene050761:CDS | 40.0% |
| ! | ATTTAGGGCCAAATTTGGGA+CGG | - | 51761:50443-50462 | None:intergenic | 40.0% |
| ! | CAGTTGATATTCAACCCGAA+TGG | + | 51761:50616-50635 | MS.gene050761:CDS | 40.0% |
| ! | CCGAATCCTTTTGCTAATGA+AGG | + | 51761:51155-51174 | MS.gene050761:CDS | 40.0% |
| ! | CTGTTGGTTATAGGTATAGG+AGG | + | 51761:51192-51211 | MS.gene050761:CDS | 40.0% |
| ! | GATATTGTTGTTCAGCGTGT+TGG | + | 51761:50933-50952 | MS.gene050761:CDS | 40.0% |
| ! | TTTTGCTAATGAAGGGGAAG+AGG | + | 51761:51163-51182 | MS.gene050761:CDS | 40.0% |
| !! | AGTATTCTGGTGTTGATTGG+AGG | + | 51761:51330-51349 | MS.gene050761:CDS | 40.0% |
| !! | CCAAGTATTCTGGTGTTGAT+TGG | + | 51761:51327-51346 | MS.gene050761:CDS | 40.0% |
| AATAACAGGGTCATCAGTGG+TGG | - | 51761:50820-50839 | None:intergenic | 45.0% | |
| ACGAATAACAGGGTCATCAG+TGG | - | 51761:50823-50842 | None:intergenic | 45.0% | |
| AGAATGAACGTCGTCTTGAG+AGG | + | 51761:50766-50785 | MS.gene050761:CDS | 45.0% | |
| AGGAACGATCGTAGGTTTCA+AGG | - | 51761:50728-50747 | None:intergenic | 45.0% | |
| ATCCATCTAAGCCACAGGTT+AGG | + | 51761:51654-51673 | MS.gene050761:CDS | 45.0% | |
| ATCCTAACCTGTGGCTTAGA+TGG | - | 51761:51659-51678 | None:intergenic | 45.0% | |
| ATGTGATCTTGGCTGTGGTT+GGG | + | 51761:51510-51529 | MS.gene050761:CDS | 45.0% | |
| ATTTGTGCCGCAAAGTCCTT+AGG | - | 51761:51542-51561 | None:intergenic | 45.0% | |
| CAAACTGTCTTTCACCGTCT+CGG | + | 51761:50674-50693 | MS.gene050761:CDS | 45.0% | |
| CAAGTTCAACCACATGCAGA+TGG | + | 51761:51743-51762 | MS.gene050761:CDS | 45.0% | |
| CAGAAGTTGGAGACACAAAG+GGG | + | 51761:51353-51372 | MS.gene050761:CDS | 45.0% | |
| CTCAAGACGACGTTCATTCT+TGG | - | 51761:50766-50785 | None:intergenic | 45.0% | |
| CTGATGACCCTGTTATTCGT+AGG | + | 51761:50823-50842 | MS.gene050761:CDS | 45.0% | |
| GCAGAAGTTGGAGACACAAA+GGG | + | 51761:51352-51371 | MS.gene050761:CDS | 45.0% | |
| GCCACAGGTTAGGATTTATG+AGG | + | 51761:51664-51683 | MS.gene050761:CDS | 45.0% | |
| GGAACGATCGTAGGTTTCAA+GGG | - | 51761:50727-50746 | None:intergenic | 45.0% | |
| GGGGATTGTGAAGTCTATTG+TGG | + | 51761:51586-51605 | MS.gene050761:CDS | 45.0% | |
| GTATCTTGTTGCTAGGTGTG+AGG | + | 51761:51235-51254 | MS.gene050761:CDS | 45.0% | |
| GTCCCAAATTTGGCCCTAAA+TGG | + | 51761:50442-50461 | MS.gene050761:CDS | 45.0% | |
| GTTGAAGTTCCGAGTCCAAT+CGG | - | 51761:50289-50308 | None:intergenic | 45.0% | |
| TCATCTTTAGCCTCAGGCAA+TGG | - | 51761:51032-51051 | None:intergenic | 45.0% | |
| TCGCAAGCCTACGAATAACA+GGG | - | 51761:50833-50852 | None:intergenic | 45.0% | |
| TCGTTCTCAAATGCATCAGC+AGG | - | 51761:51692-51711 | None:intergenic | 45.0% | |
| TGCGAACGAGGATAAAGCTA+CGG | + | 51761:50848-50867 | MS.gene050761:CDS | 45.0% | |
| TGCTACTGCTACCAATGATG+TGG | + | 51761:51805-51824 | MS.gene050761:CDS | 45.0% | |
| TGCTCATTCCCTTAGTGTTG+AGG | + | 51761:51061-51080 | MS.gene050761:CDS | 45.0% | |
| TTCGCAAGCCTACGAATAAC+AGG | - | 51761:50834-50853 | None:intergenic | 45.0% | |
| ! | CGCCATTTAGGGCCAAATTT+GGG | - | 51761:50447-50466 | None:intergenic | 45.0% |
| ! | GAAATCGAAAGCAGTATCGG+CGG | - | 51761:50346-50365 | None:intergenic | 45.0% |
| ! | TGTTGATTGGAGGCAGAAGT+TGG | + | 51761:51340-51359 | MS.gene050761:CDS | 45.0% |
| ! | TTTAGGGCCAAATTTGGGAC+GGG | - | 51761:50442-50461 | None:intergenic | 45.0% |
| !! | AAATCGAAAGCAGTATCGGC+GGG | - | 51761:50345-50364 | None:intergenic | 45.0% |
| !! | CGGGGTTTTTAGATCGGTTA+GGG | - | 51761:50326-50345 | None:intergenic | 45.0% |
| !! | TATCGGCGGGGTTTTTAGAT+CGG | - | 51761:50332-50351 | None:intergenic | 45.0% |
| ACGGAAAGAGGAGTCGTCTT+CGG | - | 51761:50397-50416 | None:intergenic | 50.0% | |
| ACTTCTTCATCGCGACGTTG+AGG | - | 51761:50492-50511 | None:intergenic | 50.0% | |
| ACTTGCTCCTCCTCTGGTAT+TGG | - | 51761:51728-51747 | None:intergenic | 50.0% | |
| AGTCGTCTTCGGCGAAGTTA+GGG | - | 51761:50386-50405 | None:intergenic | 50.0% | |
| AGTTTGTCGGAACGGGAGAA+AGG | - | 51761:50255-50274 | None:intergenic | 50.0% | |
| CAACCACAGCCAAGATCACA+TGG | - | 51761:51511-51530 | None:intergenic | 50.0% | |
| CAACCATGTGATCTTGGCTG+TGG | + | 51761:51505-51524 | MS.gene050761:CDS | 50.0% | |
| CATGTGATCTTGGCTGTGGT+TGG | + | 51761:51509-51528 | MS.gene050761:CDS | 50.0% | |
| CCACAGAGGAGAAGATCTTC+TGG | - | 51761:50702-50721 | None:intergenic | 50.0% | |
| CCAGAAGATCTTCTCCTCTG+TGG | + | 51761:50699-50718 | MS.gene050761:CDS | 50.0% | |
| CGAGACGGTGAAAGACAGTT+TGG | - | 51761:50676-50695 | None:intergenic | 50.0% | |
| CTACGCTGATGTGTGCTTCT+AGG | + | 51761:50895-50914 | MS.gene050761:CDS | 50.0% | |
| CTTGGGTGCAATTCGATCGT+AGG | - | 51761:50748-50767 | None:intergenic | 50.0% | |
| GAAGGATCCATCTAAGCCAC+AGG | + | 51761:51649-51668 | MS.gene050761:CDS | 50.0% | |
| GAAGTTAGGGAAGGAAGGGT+CGG | - | 51761:50373-50392 | None:intergenic | 50.0% | |
| GGCAGAAGTTGGAGACACAA+AGG | + | 51761:51351-51370 | MS.gene050761:CDS | 50.0% | |
| GGTGATTGCTAGGGTTAGAG+CGG | - | 51761:50575-50594 | None:intergenic | 50.0% | |
| TATTCGTAGGCTTGCGAACG+AGG | + | 51761:50836-50855 | MS.gene050761:CDS | 50.0% | |
| TCCTCTTTCCGTCTCGTTGA+CGG | + | 51761:50405-50424 | MS.gene050761:CDS | 50.0% | |
| TCGATCGTAGGAACGATCGT+AGG | - | 51761:50736-50755 | None:intergenic | 50.0% | |
| TTCTCCCGTTCCGACAAACT+CGG | + | 51761:50255-50274 | MS.gene050761:CDS | 50.0% | |
| TTCTGCCGAGTTTGTCGGAA+CGG | - | 51761:50263-50282 | None:intergenic | 50.0% | |
| ! | GCGCCATTTAGGGCCAAATT+TGG | - | 51761:50448-50467 | None:intergenic | 50.0% |
| ! | GGCTCTGGTAATGACGATCA+CGG | - | 51761:50554-50573 | None:intergenic | 50.0% |
| ! | TTAGGGCCAAATTTGGGACG+GGG | - | 51761:50441-50460 | None:intergenic | 50.0% |
| !! | AAGATCTTCTGGCTCCGAGA+CGG | - | 51761:50691-50710 | None:intergenic | 50.0% |
| !! | AATCGAAAGCAGTATCGGCG+GGG | - | 51761:50344-50363 | None:intergenic | 50.0% |
| !! | GAAGGGGACGTTGGTGTTAT+CGG | - | 51761:50229-50248 | None:intergenic | 50.0% |
| !! | GCGGGGTTTTTAGATCGGTT+AGG | - | 51761:50327-50346 | None:intergenic | 50.0% |
| !! | GTGGACTGCTCAAGCTCTTT+TGG | + | 51761:51424-51443 | MS.gene050761:CDS | 50.0% |
| !! | TAAGCGTGATGGGTCTCAGT+TGG | + | 51761:50974-50993 | MS.gene050761:CDS | 50.0% |
| AACGGGAGAAAGGAGCGAAG+GGG | - | 51761:50245-50264 | None:intergenic | 55.0% | |
| AACTCGGCAGAATCGCCGAT+TGG | + | 51761:50271-50290 | MS.gene050761:CDS | 55.0% | |
| ACATGCAGATGGTGCAGAGG+AGG | + | 51761:51754-51773 | MS.gene050761:CDS | 55.0% | |
| ACCACATGCAGATGGTGCAG+AGG | + | 51761:51751-51770 | MS.gene050761:CDS | 55.0% | |
| ACCGTCAACGAGACGGAAAG+AGG | - | 51761:50409-50428 | None:intergenic | 55.0% | |
| AGGTCGAATGTTGCAGCGGA+AGG | - | 51761:50156-50175 | None:intergenic | 55.0% | |
| CGGCGAAGTTAGGGAAGGAA+GGG | - | 51761:50377-50396 | None:intergenic | 55.0% | |
| GAACGGGAGAAAGGAGCGAA+GGG | - | 51761:50246-50265 | None:intergenic | 55.0% | |
| GACGTTGAGGAAGCTGAAGC+TGG | - | 51761:50479-50498 | None:intergenic | 55.0% | |
| GAGTCGTCTTCGGCGAAGTT+AGG | - | 51761:50387-50406 | None:intergenic | 55.0% | |
| GCCTAGGTCGAATGTTGCAG+CGG | - | 51761:50160-50179 | None:intergenic | 55.0% | |
| GGCGATTCTGCCGAGTTTGT+CGG | - | 51761:50268-50287 | None:intergenic | 55.0% | |
| GGGGAAGAGGTTGCTTCTGT+TGG | + | 51761:51176-51195 | MS.gene050761:CDS | 55.0% | |
| GGGGTTTACCGTCAACGAGA+CGG | - | 51761:50416-50435 | None:intergenic | 55.0% | |
| GTCTTCGGCGAAGTTAGGGA+AGG | - | 51761:50382-50401 | None:intergenic | 55.0% | |
| TCCGCTGCAACATTCGACCT+AGG | + | 51761:50156-50175 | MS.gene050761:CDS | 55.0% | |
| TCCGTCAGGGTTGAAGGGAA+CGG | - | 51761:50184-50203 | None:intergenic | 55.0% | |
| TCCTCTGCACCATCTGCATG+TGG | - | 51761:51755-51774 | None:intergenic | 55.0% | |
| TCGGCGAAGTTAGGGAAGGA+AGG | - | 51761:50378-50397 | None:intergenic | 55.0% | |
| TCTGCCGAGTTTGTCGGAAC+GGG | - | 51761:50262-50281 | None:intergenic | 55.0% | |
| TGTGGAGGAGCCAATACCAG+AGG | + | 51761:51715-51734 | MS.gene050761:CDS | 55.0% | |
| TTCCCTTCAACCCTGACGGA+TGG | + | 51761:50184-50203 | MS.gene050761:CDS | 55.0% | |
| TTCTCAGGAGCCATTGCCTG+AGG | + | 51761:51019-51038 | MS.gene050761:CDS | 55.0% | |
| ! | GCAGAATCGCCGATTGGACT+CGG | + | 51761:50277-50296 | MS.gene050761:CDS | 55.0% |
| ! | GGTTGAACTTGCTCCTCCTC+TGG | - | 51761:51734-51753 | None:intergenic | 55.0% |
| ! | TCCCTTCAACCCTGACGGAT+GGG | + | 51761:50185-50204 | MS.gene050761:CDS | 55.0% |
| ! | TTATCGGCGGTGGATTCGAG+TGG | - | 51761:50213-50232 | None:intergenic | 55.0% |
| !! | AGGTTTCAAGGGCACCACAG+AGG | - | 51761:50716-50735 | None:intergenic | 55.0% |
| !! | GACACAAAGGGGTGCTGTGT+TGG | + | 51761:51364-51383 | MS.gene050761:CDS | 55.0% |
| !! | GGCGTTGGAAGCGCCATTTA+GGG | - | 51761:50458-50477 | None:intergenic | 55.0% |
| !! | TGGCGTTGGAAGCGCCATTT+AGG | - | 51761:50459-50478 | None:intergenic | 55.0% |
| ACCCCATCCGTCAGGGTTGA+AGG | - | 51761:50190-50209 | None:intergenic | 60.0% | |
| AGCTCACGGCGGTGATTGCT+AGG | - | 51761:50585-50604 | None:intergenic | 60.0% | |
| CCCCATCCGTCAGGGTTGAA+GGG | - | 51761:50189-50208 | None:intergenic | 60.0% | |
| GAAAGGAGCGAAGGGGACGT+TGG | - | 51761:50238-50257 | None:intergenic | 60.0% | |
| GAGGAAGCTGAAGCTGGCGT+TGG | - | 51761:50473-50492 | None:intergenic | 60.0% | |
| GCCGTTCCCTTCAACCCTGA+CGG | + | 51761:50180-50199 | MS.gene050761:CDS | 60.0% | |
| GCTCACGGCGGTGATTGCTA+GGG | - | 51761:50584-50603 | None:intergenic | 60.0% | |
| GGAACGGGAGAAAGGAGCGA+AGG | - | 51761:50247-50266 | None:intergenic | 60.0% | |
| GGAGGAGCCAATACCAGAGG+AGG | + | 51761:51718-51737 | MS.gene050761:CDS | 60.0% | |
| GGTGCAGAGGAGGCTGTTGA+TGG | + | 51761:51764-51783 | MS.gene050761:CDS | 60.0% | |
| GTTAGGGAAGGAAGGGTCGG+AGG | - | 51761:50370-50389 | None:intergenic | 60.0% | |
| TGCTAGGGTTAGAGCGGCTC+TGG | - | 51761:50569-50588 | None:intergenic | 60.0% | |
| ! | CCAAATTTGGGACGGGGAGG+GGG | - | 51761:50435-50454 | None:intergenic | 60.0% |
| ! | CCCTTCAACCCTGACGGATG+GGG | + | 51761:50186-50205 | MS.gene050761:CDS | 60.0% |
| ! | GCCAAATTTGGGACGGGGAG+GGG | - | 51761:50436-50455 | None:intergenic | 60.0% |
| ! | GGCCAAATTTGGGACGGGGA+GGG | - | 51761:50437-50456 | None:intergenic | 60.0% |
| !! | GACGTTGGTGTTATCGGCGG+TGG | - | 51761:50223-50242 | None:intergenic | 60.0% |
| !! | GGAGGCTGTTGATGGTGCAG+AGG | + | 51761:51772-51791 | MS.gene050761:CDS | 60.0% |
| !! | GGGGACGTTGGTGTTATCGG+CGG | - | 51761:50226-50245 | None:intergenic | 60.0% |
| CCCCCTCCCCGTCCCAAATT+TGG | + | 51761:50432-50451 | MS.gene050761:CDS | 65.0% | |
| CGAGTGGACCCCATCCGTCA+GGG | - | 51761:50197-50216 | None:intergenic | 65.0% | |
| GGTTGAAGGGAACGGCGCCT+AGG | - | 51761:50176-50195 | None:intergenic | 65.0% | |
| TCGAGTGGACCCCATCCGTC+AGG | - | 51761:50198-50217 | None:intergenic | 65.0% | |
| ! | GGGCCAAATTTGGGACGGGG+AGG | - | 51761:50438-50457 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51761 | gene | 50150 | 51856 | 50150 | ID=MS.gene050761 |
| 51761 | mRNA | 50150 | 51856 | 50150 | ID=MS.gene050761.t1;Parent=MS.gene050761 |
| 51761 | exon | 50150 | 51856 | 50150 | ID=MS.gene050761.t1.exon1;Parent=MS.gene050761.t1 |
| 51761 | CDS | 50150 | 51856 | 50150 | ID=cds.MS.gene050761.t1;Parent=MS.gene050761.t1 |
| Gene Sequence |
| Protein sequence |
