Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053952.t1 | XP_013442308.1 | 93.9 | 66 | 4 | 0 | 1 | 66 | 1 | 66 | 3.10E-23 | 117.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053952.t1 | Q9SLF7 | 75.8 | 66 | 16 | 0 | 1 | 66 | 1 | 66 | 1.4e-19 | 97.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053952.t1 | B7FMX7 | 93.9 | 66 | 4 | 0 | 1 | 66 | 1 | 66 | 2.3e-23 | 117.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene053952 | 0.820085 | 8.26E-53 | -1.69E-46 |
| MS.gene050320 | MS.gene053952 | 0.828133 | 1.06E-54 | -1.69E-46 |
| MS.gene050752 | MS.gene053952 | 0.819597 | 1.07E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene053952 | 0.848867 | 4.66E-60 | -1.69E-46 |
| MS.gene051063 | MS.gene053952 | 0.80905 | 2.29E-50 | -1.69E-46 |
| MS.gene051330 | MS.gene053952 | 0.806154 | 9.44E-50 | -1.69E-46 |
| MS.gene051451 | MS.gene053952 | 0.820454 | 6.80E-53 | -1.69E-46 |
| MS.gene051746 | MS.gene053952 | 0.832109 | 1.14E-55 | -1.69E-46 |
| MS.gene051748 | MS.gene053952 | 0.855338 | 6.75E-62 | -1.69E-46 |
| MS.gene051756 | MS.gene053952 | 0.846366 | 2.27E-59 | -1.69E-46 |
| MS.gene051850 | MS.gene053952 | 0.81698 | 4.18E-52 | -1.69E-46 |
| MS.gene051903 | MS.gene053952 | 0.89672 | 2.81E-76 | -1.69E-46 |
| MS.gene052947 | MS.gene053952 | 0.842925 | 1.92E-58 | -1.69E-46 |
| MS.gene053058 | MS.gene053952 | 0.804713 | 1.89E-49 | -1.69E-46 |
| MS.gene053109 | MS.gene053952 | 0.841211 | 5.45E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene054403 | 0.817264 | 3.61E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene054937 | 0.811882 | 5.61E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene055424 | 0.806325 | 8.69E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene056075 | 0.822614 | 2.16E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene056631 | 0.825048 | 5.80E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene057094 | 0.896702 | 2.86E-76 | -1.69E-46 |
| MS.gene053952 | MS.gene057234 | 0.824719 | 6.93E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene057999 | 0.804168 | 2.46E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene058074 | 0.803661 | 3.13E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene058238 | 0.812759 | 3.61E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene058906 | 0.817386 | 3.39E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene059171 | 0.805304 | 1.42E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene059227 | 0.804686 | 1.92E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene059726 | 0.805092 | 1.58E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene06001 | 0.8761 | 1.83E-68 | -1.69E-46 |
| MS.gene053952 | MS.gene06011 | 0.819092 | 1.39E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene060465 | 0.80367 | 3.12E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene060763 | 0.805809 | 1.12E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene061145 | 0.842274 | 2.86E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene06131 | 0.808886 | 2.49E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene06172 | 0.819308 | 1.24E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene061898 | 0.817358 | 3.44E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene063817 | 0.826125 | 3.22E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene065072 | 0.815204 | 1.04E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene065513 | 0.813712 | 2.23E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene065599 | 0.822309 | 2.54E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene065602 | 0.831935 | 1.26E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene065715 | 0.822338 | 2.50E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene065998 | 0.810978 | 8.81E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene066034 | 0.826301 | 2.93E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene066035 | 0.875137 | 3.90E-68 | -1.69E-46 |
| MS.gene053952 | MS.gene066455 | 0.862723 | 4.14E-64 | -1.69E-46 |
| MS.gene053952 | MS.gene066953 | 0.851309 | 9.65E-61 | -1.69E-46 |
| MS.gene053952 | MS.gene067571 | 0.834628 | 2.68E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene067938 | 0.832172 | 1.10E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene068166 | 0.812392 | 4.34E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene068255 | 0.819365 | 1.21E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene06837 | 0.83037 | 3.05E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene069065 | 0.800198 | 1.61E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene069225 | 0.810366 | 1.19E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene069310 | 0.887789 | 1.05E-72 | -1.69E-46 |
| MS.gene053952 | MS.gene06982 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene06984 | 0.83785 | 4.07E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene06989 | 0.839661 | 1.39E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene069962 | 0.89573 | 7.26E-76 | -1.69E-46 |
| MS.gene053952 | MS.gene070222 | 0.852181 | 5.46E-61 | -1.69E-46 |
| MS.gene053952 | MS.gene070569 | 0.837777 | 4.25E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene07100 | 0.807596 | 4.68E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene07101 | 0.822802 | 1.95E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene071958 | 0.803383 | 3.58E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene071987 | 0.800476 | 1.42E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene072057 | 0.892491 | 1.51E-74 | -1.69E-46 |
| MS.gene053952 | MS.gene07217 | 0.833376 | 5.53E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene07222 | 0.891805 | 2.84E-74 | -1.69E-46 |
| MS.gene053952 | MS.gene072424 | 0.812174 | 4.84E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene072455 | 0.806563 | 7.74E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene072555 | 0.820849 | 5.52E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene072641 | 0.842797 | 2.08E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene072782 | 0.808363 | 3.21E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene072969 | 0.819354 | 1.21E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene073078 | 0.816364 | 5.74E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene073332 | 0.846635 | 1.92E-59 | -1.69E-46 |
| MS.gene053952 | MS.gene07339 | 0.861617 | 9.05E-64 | -1.69E-46 |
| MS.gene053952 | MS.gene073564 | 0.811776 | 5.91E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene073827 | 0.81803 | 2.43E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene074000 | 0.829135 | 6.10E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene074584 | 0.8121 | 5.02E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene07506 | 0.809692 | 1.67E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene07552 | 0.80674 | 7.10E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene07608 | 0.824902 | 6.28E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene08793 | 0.80918 | 2.15E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene09032 | 0.837965 | 3.81E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene09056 | 0.813181 | 2.91E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene09212 | 0.818512 | 1.89E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene09297 | 0.802322 | 5.93E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene09852 | 0.811978 | 5.34E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene20239 | 0.803113 | 4.07E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene20740 | 0.886835 | 2.42E-72 | -1.69E-46 |
| MS.gene053952 | MS.gene20886 | 0.839048 | 2.00E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene21089 | 0.802228 | 6.20E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene21219 | 0.824266 | 8.86E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene21636 | 0.832653 | 8.36E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene22968 | 0.83551 | 1.61E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene23059 | 0.866062 | 3.75E-65 | -1.69E-46 |
| MS.gene053952 | MS.gene23123 | 0.833988 | 3.89E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene23491 | 0.833854 | 4.20E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene23506 | 0.80983 | 1.56E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene23954 | 0.828243 | 1.00E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene23983 | 0.861738 | 8.30E-64 | -1.69E-46 |
| MS.gene053952 | MS.gene24597 | 0.841744 | 3.95E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene24930 | 0.860384 | 2.15E-63 | -1.69E-46 |
| MS.gene053952 | MS.gene25923 | 0.821069 | 4.91E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene25942 | 0.803547 | 3.31E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene26267 | 0.800942 | 1.14E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene26426 | 0.831371 | 1.73E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene26584 | 0.807535 | 4.82E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene26605 | 0.809067 | 2.27E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene26974 | 0.824566 | 7.53E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene26985 | 0.80314 | 4.02E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene27413 | 0.809507 | 1.83E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene27678 | 0.800901 | 1.16E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene27879 | 0.865659 | 5.03E-65 | -1.69E-46 |
| MS.gene053952 | MS.gene27991 | 0.800331 | 1.52E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene28159 | 0.814807 | 1.28E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene28323 | 0.839268 | 1.75E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene28632 | 0.850215 | 1.96E-60 | -1.69E-46 |
| MS.gene053952 | MS.gene29053 | -0.815815 | 7.62E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene29581 | 0.805295 | 1.43E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene29719 | 0.828314 | 9.63E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene29736 | 0.844294 | 8.27E-59 | -1.69E-46 |
| MS.gene053952 | MS.gene30904 | 0.813196 | 2.89E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene31196 | 0.83202 | 1.20E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene31405 | 0.875605 | 2.70E-68 | -1.69E-46 |
| MS.gene053952 | MS.gene33183 | 0.816404 | 5.63E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene33384 | 0.878617 | 2.43E-69 | -1.69E-46 |
| MS.gene053952 | MS.gene33907 | 0.800215 | 1.60E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene34283 | 0.80177 | 7.70E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene35379 | 0.868208 | 7.75E-66 | -1.69E-46 |
| MS.gene053952 | MS.gene36392 | 0.82102 | 5.04E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene36468 | 0.851164 | 1.06E-60 | -1.69E-46 |
| MS.gene053952 | MS.gene36627 | 0.807187 | 5.71E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene38070 | 0.81367 | 2.28E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene38262 | 0.827984 | 1.16E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene39222 | 0.8005 | 1.40E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene40055 | 0.832702 | 8.13E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene40648 | 0.808793 | 2.60E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene41088 | 0.830735 | 2.48E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene41171 | 0.854123 | 1.52E-61 | -1.69E-46 |
| MS.gene053952 | MS.gene41901 | 0.88961 | 2.08E-73 | -1.69E-46 |
| MS.gene053952 | MS.gene41902 | 0.885733 | 6.30E-72 | -1.69E-46 |
| MS.gene053952 | MS.gene42247 | 0.886172 | 4.31E-72 | -1.69E-46 |
| MS.gene053952 | MS.gene42455 | 0.80415 | 2.48E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene44141 | 0.841746 | 3.94E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene44260 | 0.809989 | 1.44E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene46252 | 0.811286 | 7.55E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene46355 | 0.802486 | 5.48E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene46373 | 0.801869 | 7.35E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene46392 | 0.852134 | 5.63E-61 | -1.69E-46 |
| MS.gene053952 | MS.gene46491 | 0.800145 | 1.65E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene47819 | 0.81811 | 2.33E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene47995 | 0.811093 | 8.32E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene48256 | 0.86517 | 7.17E-65 | -1.69E-46 |
| MS.gene053952 | MS.gene48661 | 0.818715 | 1.70E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene49777 | 0.87222 | 3.76E-67 | -1.69E-46 |
| MS.gene053952 | MS.gene49816 | 0.800562 | 1.36E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene50013 | 0.814126 | 1.81E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene51111 | 0.828932 | 6.83E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene51445 | 0.837074 | 6.44E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene51515 | 0.828541 | 8.49E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene51920 | 0.827017 | 1.97E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene52281 | 0.840584 | 7.96E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene54547 | 0.806121 | 9.59E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene55063 | 0.815349 | 9.68E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene55282 | 0.827221 | 1.76E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene55732 | 0.874941 | 4.55E-68 | -1.69E-46 |
| MS.gene053952 | MS.gene56011 | 0.802629 | 5.12E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene56166 | 0.831885 | 1.30E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene56436 | 0.823015 | 1.74E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene56696 | 0.849632 | 2.86E-60 | -1.69E-46 |
| MS.gene053952 | MS.gene57210 | 0.809593 | 1.75E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene57391 | 0.839752 | 1.31E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene57462 | 0.840233 | 9.84E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene57847 | 0.828968 | 6.69E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene58098 | 0.80977 | 1.61E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene58215 | 0.80943 | 1.90E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene58227 | 0.881506 | 2.27E-70 | -1.69E-46 |
| MS.gene053952 | MS.gene58467 | 0.803589 | 3.24E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene58693 | 0.816254 | 6.08E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene58776 | 0.805659 | 1.20E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene59505 | 0.823142 | 1.62E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene59979 | 0.808431 | 3.11E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene60093 | 0.813623 | 2.33E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene60120 | 0.801204 | 1.01E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene60265 | 0.833837 | 4.24E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene60717 | 0.865818 | 4.48E-65 | -1.69E-46 |
| MS.gene053952 | MS.gene61001 | 0.803617 | 3.20E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene61257 | 0.805902 | 1.07E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene61542 | 0.808087 | 3.68E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene61543 | 0.825683 | 4.10E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene62834 | 0.89198 | 2.42E-74 | -1.69E-46 |
| MS.gene053952 | MS.gene62943 | 0.824493 | 7.84E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene63726 | 0.851655 | 7.70E-61 | -1.69E-46 |
| MS.gene053952 | MS.gene63846 | 0.813931 | 1.99E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene64396 | 0.810456 | 1.14E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene64806 | 0.82245 | 2.35E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene64920 | 0.803039 | 4.22E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene65076 | 0.847798 | 9.21E-60 | -1.69E-46 |
| MS.gene053952 | MS.gene65412 | 0.809207 | 2.12E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene66089 | 0.918243 | 1.98E-86 | -1.69E-46 |
| MS.gene053952 | MS.gene66119 | 0.819762 | 9.80E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene66475 | 0.849878 | 2.44E-60 | -1.69E-46 |
| MS.gene053952 | MS.gene66818 | 0.833292 | 5.80E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene67485 | 0.808 | 3.84E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene67681 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene67690 | 0.80824 | 3.41E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene69262 | 0.800077 | 1.71E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene69611 | 0.801454 | 8.94E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene69649 | 0.842537 | 2.43E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene70105 | 0.837485 | 5.06E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene70175 | 0.801697 | 7.97E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene70215 | 0.837208 | 5.95E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene70383 | 0.810775 | 9.75E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene70530 | 0.80438 | 2.22E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene70596 | 0.809033 | 2.31E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene70613 | 0.801983 | 6.96E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene71547 | 0.81301 | 3.18E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene72285 | 0.877316 | 6.93E-69 | -1.69E-46 |
| MS.gene053952 | MS.gene72894 | 0.862383 | 5.27E-64 | -1.69E-46 |
| MS.gene053952 | MS.gene74854 | 0.814347 | 1.61E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene74900 | 0.800718 | 1.26E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene74989 | 0.808671 | 2.76E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene75060 | 0.800928 | 1.14E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene75062 | 0.806546 | 7.81E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene75105 | 0.801885 | 7.29E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene75171 | 0.865099 | 7.55E-65 | -1.69E-46 |
| MS.gene053952 | MS.gene75477 | 0.834266 | 3.31E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene75625 | 0.818642 | 1.76E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene75781 | 0.825314 | 5.02E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene76248 | 0.821082 | 4.88E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene76440 | 0.844232 | 8.59E-59 | -1.69E-46 |
| MS.gene053952 | MS.gene76478 | 0.828051 | 1.11E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene76576 | 0.830791 | 2.41E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene77163 | 0.825275 | 5.12E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene77282 | 0.854827 | 9.50E-62 | -1.69E-46 |
| MS.gene053952 | MS.gene77391 | 0.826398 | 2.77E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene77441 | 0.820485 | 6.69E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene77647 | 0.806423 | 8.29E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene78232 | 0.813494 | 2.49E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene78314 | 0.804315 | 2.29E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene78764 | 0.85526 | 7.11E-62 | -1.69E-46 |
| MS.gene053952 | MS.gene79605 | 0.833313 | 5.73E-56 | -1.69E-46 |
| MS.gene053952 | MS.gene81055 | 0.819316 | 1.24E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene81280 | 0.818091 | 2.35E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene81703 | 0.821853 | 3.24E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene83135 | 0.805658 | 1.20E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene83217 | 0.893161 | 8.13E-75 | -1.69E-46 |
| MS.gene053952 | MS.gene83961 | 0.806607 | 7.58E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene84455 | 0.827856 | 1.24E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene85108 | 0.849453 | 3.20E-60 | -1.69E-46 |
| MS.gene053952 | MS.gene85110 | 0.826494 | 2.63E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene85610 | 0.810371 | 1.19E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene86214 | 0.81923 | 1.30E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene86265 | 0.804868 | 1.76E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene86392 | 0.84361 | 1.26E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene86937 | 0.839434 | 1.59E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene88427 | 0.881326 | 2.63E-70 | -1.69E-46 |
| MS.gene053952 | MS.gene88859 | 0.820806 | 5.65E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene88976 | 0.804975 | 1.67E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene89027 | 0.838776 | 2.35E-57 | -1.69E-46 |
| MS.gene053952 | MS.gene89562 | 0.800727 | 1.26E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene89663 | 0.841842 | 3.72E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene89677 | 0.824353 | 8.45E-54 | -1.69E-46 |
| MS.gene053952 | MS.gene89712 | 0.803241 | 3.83E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene89721 | 0.852076 | 5.85E-61 | -1.69E-46 |
| MS.gene053952 | MS.gene90698 | 0.80721 | 5.65E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene90833 | 0.862744 | 4.08E-64 | -1.69E-46 |
| MS.gene053952 | MS.gene91524 | 0.855482 | 6.12E-62 | -1.69E-46 |
| MS.gene053952 | MS.gene92135 | 0.822884 | 1.87E-53 | -1.69E-46 |
| MS.gene053952 | MS.gene92557 | 0.853076 | 3.03E-61 | -1.69E-46 |
| MS.gene053952 | MS.gene92572 | 0.871851 | 4.99E-67 | -1.69E-46 |
| MS.gene053952 | MS.gene92818 | 0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene92819 | 0.84267 | 2.24E-58 | -1.69E-46 |
| MS.gene053952 | MS.gene93973 | 0.870272 | 1.65E-66 | -1.69E-46 |
| MS.gene053952 | MS.gene93983 | 0.80315 | 4.00E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene94183 | 0.856894 | 2.36E-62 | -1.69E-46 |
| MS.gene053952 | MS.gene95251 | 0.804211 | 2.41E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene95469 | 0.829775 | 4.26E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene96690 | 0.803365 | 3.61E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene98889 | 0.8276 | 1.43E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067331 | MS.gene053952 | PPI |
| MS.gene045633 | MS.gene053952 | PPI |
| MS.gene050761 | MS.gene053952 | PPI |
| MS.gene053952 | MS.gene052268 | PPI |
| MS.gene053952 | MS.gene052265 | PPI |
| MS.gene44900 | MS.gene053952 | PPI |
| MS.gene053952 | MS.gene91826 | PPI |
| MS.gene053952 | MS.gene78764 | PPI |
| MS.gene82009 | MS.gene053952 | PPI |
| MS.gene073078 | MS.gene053952 | PPI |
| MS.gene003413 | MS.gene053952 | PPI |
| MS.gene009874 | MS.gene053952 | PPI |
| MS.gene28964 | MS.gene053952 | PPI |
| MS.gene072563 | MS.gene053952 | PPI |
| MS.gene053952 | MS.gene032942 | PPI |
| MS.gene28704 | MS.gene053952 | PPI |
| MS.gene053952 | MS.gene35379 | PPI |
| MS.gene050964 | MS.gene053952 | PPI |
| MS.gene060483 | MS.gene053952 | PPI |
| MS.gene06617 | MS.gene053952 | PPI |
| MS.gene053952 | MS.gene054381 | PPI |
| MS.gene08521 | MS.gene053952 | PPI |
| MS.gene042719 | MS.gene053952 | PPI |
| MS.gene013506 | MS.gene053952 | PPI |
| MS.gene76615 | MS.gene053952 | PPI |
| MS.gene057237 | MS.gene053952 | PPI |
| MS.gene88792 | MS.gene053952 | PPI |
| MS.gene01952 | MS.gene053952 | PPI |
| MS.gene43071 | MS.gene053952 | PPI |
| MS.gene06833 | MS.gene053952 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053952.t1 | MTR_0227s0020 | 96.460 | 113 | 4 | 0 | 1 | 113 | 1 | 113 | 7.83e-71 | 207 |
| MS.gene053952.t1 | MTR_2g085085 | 89.381 | 113 | 12 | 0 | 1 | 113 | 1 | 113 | 1.22e-45 | 143 |
| MS.gene053952.t1 | MTR_1g060600 | 73.451 | 113 | 29 | 1 | 1 | 113 | 1 | 112 | 4.45e-28 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053952.t1 | AT2G27710 | 77.143 | 70 | 16 | 0 | 1 | 70 | 1 | 70 | 3.52e-32 | 108 |
| MS.gene053952.t1 | AT3G44590 | 65.487 | 113 | 37 | 2 | 1 | 113 | 1 | 111 | 7.62e-31 | 106 |
| MS.gene053952.t1 | AT3G44590 | 65.487 | 113 | 37 | 2 | 1 | 113 | 1 | 111 | 7.62e-31 | 106 |
| MS.gene053952.t1 | AT2G27720 | 66.087 | 115 | 37 | 1 | 1 | 113 | 1 | 115 | 4.70e-28 | 99.4 |
| MS.gene053952.t1 | AT2G27710 | 75.385 | 65 | 16 | 0 | 1 | 65 | 1 | 65 | 1.72e-25 | 92.8 |
| MS.gene053952.t1 | AT2G27710 | 75.385 | 65 | 16 | 0 | 1 | 65 | 1 | 65 | 1.72e-25 | 92.8 |
| MS.gene053952.t1 | AT2G27710 | 75.385 | 65 | 16 | 0 | 1 | 65 | 1 | 65 | 1.72e-25 | 92.8 |
| MS.gene053952.t1 | AT2G27720 | 59.843 | 127 | 37 | 2 | 1 | 113 | 1 | 127 | 1.82e-24 | 90.5 |
| MS.gene053952.t1 | AT3G28500 | 55.556 | 117 | 46 | 4 | 1 | 113 | 1 | 115 | 3.59e-24 | 89.4 |
| MS.gene053952.t1 | AT2G27720 | 57.692 | 130 | 38 | 2 | 1 | 113 | 1 | 130 | 2.99e-23 | 87.4 |
| MS.gene053952.t1 | AT2G27720 | 66.667 | 87 | 27 | 1 | 29 | 113 | 5 | 91 | 2.48e-14 | 63.5 |
| MS.gene053952.t1 | AT5G40040 | 57.018 | 114 | 48 | 1 | 1 | 113 | 1 | 114 | 8.82e-14 | 62.8 |
Find 27 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTATTTGTTGGCTGTTT+TGG | 0.077686 | 5.3:+41125747 | MS.gene053952:CDS |
| TCCTCCTTTGCTTCGGCAGC+TGG | 0.312544 | 5.3:-41127577 | None:intergenic |
| AAGTTGGCTTCAGTGCCTTC+TGG | 0.324137 | 5.3:+41127499 | MS.gene053952:CDS |
| ATCAAAACCATCCTCGCTTC+AGG | 0.368870 | 5.3:+41125799 | MS.gene053952:CDS |
| GCTGTGGCTGTTGCTGCTTC+CGG | 0.372107 | 5.3:+41127529 | MS.gene053952:CDS |
| GGAAAAGAAGGTTGAAGAAA+AGG | 0.373370 | 5.3:+41127597 | MS.gene053952:CDS |
| GATCATCGCAGCTTATTTGT+TGG | 0.413285 | 5.3:+41125738 | MS.gene053952:CDS |
| GCTGTTGCTGCTTCCGGTGG+AGG | 0.434566 | 5.3:+41127535 | MS.gene053952:CDS |
| GCTTCAGTGCCTTCTGGTGG+AGG | 0.435432 | 5.3:+41127505 | MS.gene053952:CDS |
| AGCAGCTGCAGCACCTCCAC+CGG | 0.469171 | 5.3:-41127548 | None:intergenic |
| CAACTCAACATTTGAGTCCT+CGG | 0.476762 | 5.3:-41127419 | None:intergenic |
| TGCTAGTGGAAGAGAGAAGT+TGG | 0.493210 | 5.3:+41127483 | MS.gene053952:CDS |
| TGCACCAGCTGCCGAAGCAA+AGG | 0.494374 | 5.3:+41127573 | MS.gene053952:CDS |
| GCCTTCTGGTGGAGGTGCTG+TGG | 0.497647 | 5.3:+41127513 | MS.gene053952:CDS |
| TTGGCTTCAGTGCCTTCTGG+TGG | 0.507222 | 5.3:+41127502 | MS.gene053952:CDS |
| GCCACAGCACCTCCACCAGA+AGG | 0.515129 | 5.3:-41127514 | None:intergenic |
| TTTGATATCATCAGCGGAAG+GGG | 0.519904 | 5.3:-41125782 | None:intergenic |
| AACAAAGAAACTTACATCAT+CGG | 0.541190 | 5.3:-41127626 | None:intergenic |
| CGAAGCAAAGGAGGAAAAGA+AGG | 0.550592 | 5.3:+41127585 | MS.gene053952:CDS |
| GTGGCTGTTGCTGCTTCCGG+TGG | 0.555914 | 5.3:+41127532 | MS.gene053952:CDS |
| TTTGAGTGAAGTCAAGGGCA+AGG | 0.559487 | 5.3:+41127444 | MS.gene053952:CDS |
| GTAAGAACCTGAAGCGAGGA+TGG | 0.572739 | 5.3:-41125806 | None:intergenic |
| ACCAGCTGCCGAAGCAAAGG+AGG | 0.585812 | 5.3:+41127576 | MS.gene053952:CDS |
| TTTGCCGAGCTAATTGCTAG+TGG | 0.606320 | 5.3:+41127469 | MS.gene053952:CDS |
| TCTTCCACTAGCAATTAGCT+CGG | 0.634325 | 5.3:-41127473 | None:intergenic |
| TATAGTTGGAGTTGAAGCCG+AGG | 0.682665 | 5.3:+41127402 | MS.gene053952:intron |
| AGAGGTAAGAACCTGAAGCG+AGG | 0.691907 | 5.3:-41125810 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATGGAAAAAATTATATT+TGG | + | chr5.3:41126222-41126241 | MS.gene053952:intron | 10.0% |
| !! | ATTTGTTTATATATATTCTT+CGG | + | chr5.3:41127262-41127281 | MS.gene053952:intron | 10.0% |
| !! | GTATTTAAGTATATTATTTA+AGG | - | chr5.3:41126363-41126382 | None:intergenic | 10.0% |
| !!! | ACAATATAATTTTTAGTTTT+AGG | - | chr5.3:41126185-41126204 | None:intergenic | 10.0% |
| !!! | CAATATAATTTTTAGTTTTA+GGG | - | chr5.3:41126184-41126203 | None:intergenic | 10.0% |
| !! | AACAATAAATAAATTTGTCA+AGG | - | chr5.3:41127234-41127253 | None:intergenic | 15.0% |
| !!! | AATATTGTTTTTTAGCATTA+TGG | - | chr5.3:41126385-41126404 | None:intergenic | 15.0% |
| !!! | TAATTTTTTCCATAATTTCT+TGG | - | chr5.3:41126218-41126237 | None:intergenic | 15.0% |
| !!! | TTCTTTGTTATTTTTATAGT+TGG | + | chr5.3:41127388-41127407 | MS.gene053952:intron | 15.0% |
| !! | ATCAAAATTCAATGTTTATC+AGG | - | chr5.3:41127207-41127226 | None:intergenic | 20.0% |
| !! | CAATAATCAAAATCTATGAA+CGG | - | chr5.3:41127157-41127176 | None:intergenic | 20.0% |
| !! | TTGATTGTAATTGAATATAG+TGG | + | chr5.3:41125962-41125981 | MS.gene053952:intron | 20.0% |
| !!! | AAAAAAAAGTACATTGCTTA+AGG | - | chr5.3:41126414-41126433 | None:intergenic | 20.0% |
| ! | AAACAAAAAATTGCAAAGAG+TGG | - | chr5.3:41125998-41126017 | None:intergenic | 25.0% |
| ! | AAACATAACCAAAAAAAGAG+AGG | - | chr5.3:41125831-41125850 | None:intergenic | 25.0% |
| ! | AACAAAGAAACTTACATCAT+CGG | - | chr5.3:41127629-41127648 | None:intergenic | 25.0% |
| ! | AAGCGACAAATAATAGTAAT+TGG | + | chr5.3:41126667-41126686 | MS.gene053952:intron | 25.0% |
| ! | AATAAAGGACCAAGAAATTA+TGG | + | chr5.3:41126206-41126225 | MS.gene053952:intron | 25.0% |
| ! | AGCGACAAATAATAGTAATT+GGG | + | chr5.3:41126668-41126687 | MS.gene053952:intron | 25.0% |
| ! | GGCATTAACTAATAGTAATT+GGG | + | chr5.3:41126714-41126733 | MS.gene053952:intron | 25.0% |
| ! | GTTATGTAGTTGAATGAATT+AGG | + | chr5.3:41125938-41125957 | MS.gene053952:intron | 25.0% |
| ! | TTACTACGTTGAATTGTTAT+CGG | + | chr5.3:41127096-41127115 | MS.gene053952:intron | 25.0% |
| AATGTTTATCAGGCTTCAAA+AGG | - | chr5.3:41127197-41127216 | None:intergenic | 30.0% | |
| ATTATCTCTGTTGTCAATAG+CGG | - | chr5.3:41127077-41127096 | None:intergenic | 30.0% | |
| GGGCATTAACTAATAGTAAT+TGG | + | chr5.3:41126713-41126732 | MS.gene053952:intron | 30.0% | |
| TAATAGTAATTGGGAGTAGT+GGG | + | chr5.3:41126723-41126742 | MS.gene053952:intron | 30.0% | |
| AATAGTAATTGGGAGTAGAG+AGG | + | chr5.3:41126678-41126697 | MS.gene053952:intron | 35.0% | |
| AATTACCATGGTTGTCAAAG+CGG | + | chr5.3:41126076-41126095 | MS.gene053952:intron | 35.0% | |
| ATAGTAATTGGGAGTAGAGA+GGG | + | chr5.3:41126679-41126698 | MS.gene053952:intron | 35.0% | |
| CTAATAGTAATTGGGAGTAG+TGG | + | chr5.3:41126722-41126741 | MS.gene053952:intron | 35.0% | |
| GACACTACACATAATTACCA+TGG | + | chr5.3:41126064-41126083 | MS.gene053952:intron | 35.0% | |
| GGAAAAGAAGGTTGAAGAAA+AGG | + | chr5.3:41127597-41127616 | MS.gene053952:CDS | 35.0% | |
| GTAAGATCCGTATATGCTAA+CGG | - | chr5.3:41126872-41126891 | None:intergenic | 35.0% | |
| TAAGATCCGTATATGCTAAC+GGG | - | chr5.3:41126871-41126890 | None:intergenic | 35.0% | |
| ! | TTTTGATATCATCAGCGGAA+GGG | - | chr5.3:41125786-41125805 | None:intergenic | 35.0% |
| !! | AGCTTATTTGTTGGCTGTTT+TGG | + | chr5.3:41125747-41125766 | MS.gene053952:CDS | 35.0% |
| !! | GCTTATTTGTTGGCTGTTTT+GGG | + | chr5.3:41125748-41125767 | MS.gene053952:CDS | 35.0% |
| !! | TTGCTTTTGAGTGAAGTCAA+GGG | + | chr5.3:41127439-41127458 | MS.gene053952:CDS | 35.0% |
| !!! | ATCTTTGTTTTGCAGGACAT+GGG | + | chr5.3:41127710-41127729 | MS.gene053952:intron | 35.0% |
| !!! | GATGGTTTTGATATCATCAG+CGG | - | chr5.3:41125791-41125810 | None:intergenic | 35.0% |
| !!! | GGTTCTTACCTCTCTTTTTT+TGG | + | chr5.3:41125820-41125839 | MS.gene053952:intron | 35.0% |
| AACACGTTTAGTCACGTGAA+TGG | - | chr5.3:41126781-41126800 | None:intergenic | 40.0% | |
| CAAAATCTATGAACGGACAC+CGG | - | chr5.3:41127150-41127169 | None:intergenic | 40.0% | |
| CAACTCAACATTTGAGTCCT+CGG | - | chr5.3:41127422-41127441 | None:intergenic | 40.0% | |
| GATCATCGCAGCTTATTTGT+TGG | + | chr5.3:41125738-41125757 | MS.gene053952:CDS | 40.0% | |
| GCATCATCGTTGTAACATAG+TGG | + | chr5.3:41126832-41126851 | MS.gene053952:intron | 40.0% | |
| TCGGGTTCTGTGTAAAATAC+TGG | - | chr5.3:41126906-41126925 | None:intergenic | 40.0% | |
| TCTGTGTAAAATACTGGTGC+TGG | - | chr5.3:41126900-41126919 | None:intergenic | 40.0% | |
| TCTTCCACTAGCAATTAGCT+CGG | - | chr5.3:41127476-41127495 | None:intergenic | 40.0% | |
| TTTGATATCATCAGCGGAAG+GGG | - | chr5.3:41125785-41125804 | None:intergenic | 40.0% | |
| ! | CTTCTTTTCCTCCTTTGCTT+CGG | - | chr5.3:41127587-41127606 | None:intergenic | 40.0% |
| !! | CGTTGTAACATAGTGGATCT+TGG | + | chr5.3:41126839-41126858 | MS.gene053952:intron | 40.0% |
| !! | GTTTTGATATCATCAGCGGA+AGG | - | chr5.3:41125787-41125806 | None:intergenic | 40.0% |
| !! | TATTTGTTGGCTGTTTTGGG+CGG | + | chr5.3:41125751-41125770 | MS.gene053952:CDS | 40.0% |
| !!! | CATCTTTGTTTTGCAGGACA+TGG | + | chr5.3:41127709-41127728 | MS.gene053952:intron | 40.0% |
| !!! | CGTTGTCATCTTTGTTTTGC+AGG | + | chr5.3:41127703-41127722 | MS.gene053952:intron | 40.0% |
| !!! | GTTGCTTTTGAGTGAAGTCA+AGG | + | chr5.3:41127438-41127457 | MS.gene053952:CDS | 40.0% |
| AGGGAAAAGCGGATCAAAAG+CGG | - | chr5.3:41126979-41126998 | None:intergenic | 45.0% | |
| ATCAAAACCATCCTCGCTTC+AGG | + | chr5.3:41125799-41125818 | MS.gene053952:CDS | 45.0% | |
| ATCCGACCCGTTAGCATATA+CGG | + | chr5.3:41126862-41126881 | MS.gene053952:intron | 45.0% | |
| CGAAGCAAAGGAGGAAAAGA+AGG | + | chr5.3:41127585-41127604 | MS.gene053952:CDS | 45.0% | |
| TATAGTTGGAGTTGAAGCCG+AGG | + | chr5.3:41127402-41127421 | MS.gene053952:intron | 45.0% | |
| TGCTAGTGGAAGAGAGAAGT+TGG | + | chr5.3:41127483-41127502 | MS.gene053952:CDS | 45.0% | |
| TTTGAGTGAAGTCAAGGGCA+AGG | + | chr5.3:41127444-41127463 | MS.gene053952:CDS | 45.0% | |
| TTTGCCGAGCTAATTGCTAG+TGG | + | chr5.3:41127469-41127488 | MS.gene053952:CDS | 45.0% | |
| ! | ATCCGTATATGCTAACGGGT+CGG | - | chr5.3:41126867-41126886 | None:intergenic | 45.0% |
| !! | GTTATCGGTTTCGATTTGCC+TGG | + | chr5.3:41127111-41127130 | MS.gene053952:intron | 45.0% |
| !! | AAAAATTATATTGTTAATAA+AGG | + | chr5.3:41126191-41126210 | MS.gene053952:intron | 5.0% |
| !! | ATAATCATAATAATAATAAT+AGG | - | chr5.3:41126547-41126566 | None:intergenic | 5.0% |
| !! | ATAATTATTGAAAATAAAAA+AGG | + | chr5.3:41126609-41126628 | MS.gene053952:intron | 5.0% |
| !! | TAATCATAATAATAATAATA+GGG | - | chr5.3:41126546-41126565 | None:intergenic | 5.0% |
| AGAGGTAAGAACCTGAAGCG+AGG | - | chr5.3:41125813-41125832 | None:intergenic | 50.0% | |
| AGTAGAGAGGGTTACAGCTG+TGG | + | chr5.3:41126691-41126710 | MS.gene053952:intron | 50.0% | |
| ATCTATGAACGGACACCGGA+CGG | - | chr5.3:41127146-41127165 | None:intergenic | 50.0% | |
| CGTTTAGTCACGTGAATGGC+TGG | - | chr5.3:41126777-41126796 | None:intergenic | 50.0% | |
| CGTTTCCGCTTTGACAACCA+TGG | - | chr5.3:41126084-41126103 | None:intergenic | 50.0% | |
| GCTTTCGCTCACTTCTTCAG+AGG | - | chr5.3:41127296-41127315 | None:intergenic | 50.0% | |
| GGGAAAAGCGGATCAAAAGC+GGG | - | chr5.3:41126978-41126997 | None:intergenic | 50.0% | |
| GTAAGAACCTGAAGCGAGGA+TGG | - | chr5.3:41125809-41125828 | None:intergenic | 50.0% | |
| GTAGAGAGGGTTACAGCTGT+GGG | + | chr5.3:41126692-41126711 | MS.gene053952:intron | 50.0% | |
| TAGAGAGGGTTACAGCTGTG+GGG | + | chr5.3:41126693-41126712 | MS.gene053952:intron | 50.0% | |
| TGGTTGTCAAAGCGGAAACG+CGG | + | chr5.3:41126084-41126103 | MS.gene053952:intron | 50.0% | |
| TTGTCAATAGCGGCCAAACG+CGG | - | chr5.3:41127067-41127086 | None:intergenic | 50.0% | |
| ! | AAGTTGGCTTCAGTGCCTTC+TGG | + | chr5.3:41127499-41127518 | MS.gene053952:CDS | 50.0% |
| !! | GAGTAGTGGGTTACAGCTGT+GGG | + | chr5.3:41126736-41126755 | MS.gene053952:intron | 50.0% |
| AGTCGCGCGTTAGGGAAAAG+CGG | - | chr5.3:41126990-41127009 | None:intergenic | 55.0% | |
| GGCCACCCCAAAAATTGACG+CGG | + | chr5.3:41126115-41126134 | MS.gene053952:intron | 55.0% | |
| TTGGCTTCAGTGCCTTCTGG+TGG | + | chr5.3:41127502-41127521 | MS.gene053952:CDS | 55.0% | |
| ! | ACCGCGCCGCGTCAATTTTT+GGG | - | chr5.3:41126124-41126143 | None:intergenic | 55.0% |
| ! | CGGATCAAAAGCGGGTTTCG+CGG | - | chr5.3:41126970-41126989 | None:intergenic | 55.0% |
| ! | CTTTTCCCTAACGCGCGACT+CGG | + | chr5.3:41126990-41127009 | MS.gene053952:intron | 55.0% |
| ! | TACCGCGCCGCGTCAATTTT+TGG | - | chr5.3:41126125-41126144 | None:intergenic | 55.0% |
| !! | CTGACGCGCTAGGCTGTTTT+CGG | + | chr5.3:41127020-41127039 | MS.gene053952:intron | 55.0% |
| !! | GGAGTAGTGGGTTACAGCTG+TGG | + | chr5.3:41126735-41126754 | MS.gene053952:intron | 55.0% |
| AATTGACGCGGCGCGGTATG+CGG | + | chr5.3:41126127-41126146 | MS.gene053952:intron | 60.0% | |
| ACCAGCTGCCGAAGCAAAGG+AGG | + | chr5.3:41127576-41127595 | MS.gene053952:CDS | 60.0% | |
| ACCGGACGGACACAGATACC+AGG | - | chr5.3:41127132-41127151 | None:intergenic | 60.0% | |
| CCCCAAAAATTGACGCGGCG+CGG | + | chr5.3:41126120-41126139 | MS.gene053952:intron | 60.0% | |
| CGCTCCGCTACACCGAAAAG+CGG | + | chr5.3:41126944-41126963 | MS.gene053952:intron | 60.0% | |
| GCCTGGTATCTGTGTCCGTC+CGG | + | chr5.3:41127128-41127147 | MS.gene053952:intron | 60.0% | |
| GCGGGGGCTATTACATGACG+CGG | + | chr5.3:41126157-41126176 | MS.gene053952:intron | 60.0% | |
| GCTTCAGTGCCTTCTGGTGG+AGG | + | chr5.3:41127505-41127524 | MS.gene053952:CDS | 60.0% | |
| TCCTCCTTTGCTTCGGCAGC+TGG | - | chr5.3:41127580-41127599 | None:intergenic | 60.0% | |
| TGCACCAGCTGCCGAAGCAA+AGG | + | chr5.3:41127573-41127592 | MS.gene053952:CDS | 60.0% | |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | - | chr5.3:41126123-41126142 | None:intergenic | 60.0% |
| ! | GCTGTGGCTGTTGCTGCTTC+CGG | + | chr5.3:41127529-41127548 | MS.gene053952:CDS | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | - | chr5.3:41126120-41126139 | None:intergenic | 60.0% |
| !! | CGCTTTTCGGTGTAGCGGAG+CGG | - | chr5.3:41126946-41126965 | None:intergenic | 60.0% |
| !! | GCTTTTCGGTGTAGCGGAGC+GGG | - | chr5.3:41126945-41126964 | None:intergenic | 60.0% |
| AGCAGCTGCAGCACCTCCAC+CGG | - | chr5.3:41127551-41127570 | None:intergenic | 65.0% | |
| ATTGACGCGGCGCGGTATGC+GGG | + | chr5.3:41126128-41126147 | MS.gene053952:intron | 65.0% | |
| GCCACAGCACCTCCACCAGA+AGG | - | chr5.3:41127517-41127536 | None:intergenic | 65.0% | |
| GGGTCAAAGGCGGCGCGATT+CGG | - | chr5.3:41126925-41126944 | None:intergenic | 65.0% | |
| GGTCAAAGGCGGCGCGATTC+GGG | - | chr5.3:41126924-41126943 | None:intergenic | 65.0% | |
| ! | GCTGTTGCTGCTTCCGGTGG+AGG | + | chr5.3:41127535-41127554 | MS.gene053952:CDS | 65.0% |
| ! | GGTGTAGCGGAGCGGGTCAA+AGG | - | chr5.3:41126938-41126957 | None:intergenic | 65.0% |
| ! | GTAGCGGAGCGGGTCAAAGG+CGG | - | chr5.3:41126935-41126954 | None:intergenic | 65.0% |
| ! | GTGGCTGTTGCTGCTTCCGG+TGG | + | chr5.3:41127532-41127551 | MS.gene053952:CDS | 65.0% |
| !! | GCCTTCTGGTGGAGGTGCTG+TGG | + | chr5.3:41127513-41127532 | MS.gene053952:CDS | 65.0% |
| !!! | CGGGTTTCGCGGCCGCTTTT+CGG | - | chr5.3:41126959-41126978 | None:intergenic | 65.0% |
| !!! | GCGGCCGCTTTTCGGTGTAG+CGG | - | chr5.3:41126951-41126970 | None:intergenic | 65.0% |
| CGCGACCGAGTCGCGCGTTA+GGG | - | chr5.3:41126998-41127017 | None:intergenic | 70.0% | |
| AGCGGAAACGCGGCGCGACG+CGG | + | chr5.3:41126094-41126113 | MS.gene053952:intron | 75.0% | |
| CGGTCGCGCTCTGACGCGCT+AGG | + | chr5.3:41127010-41127029 | MS.gene053952:intron | 75.0% | |
| GCGCGACCGAGTCGCGCGTT+AGG | - | chr5.3:41126999-41127018 | None:intergenic | 75.0% | |
| GGCCAAACGCGGCGCGATCG+CGG | - | chr5.3:41127056-41127075 | None:intergenic | 75.0% | |
| ! | AACGCGGCGCGATCGCGGCG+CGG | - | chr5.3:41127051-41127070 | None:intergenic | 80.0% |
| ! | CGCCGCGATCGCGCCGCGTT+TGG | + | chr5.3:41127051-41127070 | MS.gene053952:intron | 80.0% |
| ! | CGCGGTATGCGGGCGCGACG+CGG | + | chr5.3:41126138-41126157 | MS.gene053952:intron | 80.0% |
| ! | CGGTATGCGGGCGCGACGCG+GGG | + | chr5.3:41126140-41126159 | MS.gene053952:intron | 80.0% |
| ! | GCGGTATGCGGGCGCGACGC+GGG | + | chr5.3:41126139-41126158 | MS.gene053952:intron | 80.0% |
| ! | GGTATGCGGGCGCGACGCGG+GGG | + | chr5.3:41126141-41126160 | MS.gene053952:intron | 80.0% |
| ! | GGCGCGATCGCGGCGCGGCG+CGG | - | chr5.3:41127046-41127065 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 41125733 | 41127751 | 41125733 | ID=MS.gene053952 |
| chr5.3 | mRNA | 41125733 | 41127751 | 41125733 | ID=MS.gene053952.t1;Parent=MS.gene053952 |
| chr5.3 | exon | 41125733 | 41125820 | 41125733 | ID=MS.gene053952.t1.exon1;Parent=MS.gene053952.t1 |
| chr5.3 | CDS | 41125733 | 41125820 | 41125733 | ID=cds.MS.gene053952.t1;Parent=MS.gene053952.t1 |
| chr5.3 | exon | 41127407 | 41127633 | 41127407 | ID=MS.gene053952.t1.exon2;Parent=MS.gene053952.t1 |
| chr5.3 | CDS | 41127407 | 41127633 | 41127407 | ID=cds.MS.gene053952.t1;Parent=MS.gene053952.t1 |
| chr5.3 | exon | 41127725 | 41127751 | 41127725 | ID=MS.gene053952.t1.exon3;Parent=MS.gene053952.t1 |
| chr5.3 | CDS | 41127725 | 41127751 | 41127725 | ID=cds.MS.gene053952.t1;Parent=MS.gene053952.t1 |
| Gene Sequence |
| Protein sequence |
