Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050992.t1 | XP_013444503.1 | 96.2 | 638 | 23 | 1 | 1 | 637 | 1 | 638 | 0.00E+00 | 1123.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050992.t1 | Q9BQ70 | 29.7 | 478 | 309 | 9 | 160 | 630 | 177 | 634 | 4.5e-59 | 230.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050992.t1 | G7ZZI1 | 96.2 | 638 | 23 | 1 | 1 | 637 | 1 | 638 | 0.0e+00 | 1123.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050317 | MS.gene050992 | 0.80911 | 2.23E-50 | -1.69E-46 |
| MS.gene050992 | MS.gene055424 | 0.83003 | 3.69E-55 | -1.69E-46 |
| MS.gene050992 | MS.gene25015 | 0.883197 | 5.50E-71 | -1.69E-46 |
| MS.gene050992 | MS.gene26426 | 0.810292 | 1.24E-50 | -1.69E-46 |
| MS.gene050992 | MS.gene26811 | 0.826565 | 2.53E-54 | -1.69E-46 |
| MS.gene050992 | MS.gene38070 | 0.819255 | 1.28E-52 | -1.69E-46 |
| MS.gene050992 | MS.gene40055 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene050992 | MS.gene49777 | 0.819915 | 9.04E-53 | -1.69E-46 |
| MS.gene050992 | MS.gene68171 | 0.800188 | 1.62E-48 | -1.69E-46 |
| MS.gene050992 | MS.gene69649 | 0.81826 | 2.15E-52 | -1.69E-46 |
| MS.gene050992 | MS.gene75884 | 0.82468 | 7.08E-54 | -1.69E-46 |
| MS.gene050992 | MS.gene76478 | 0.803413 | 3.53E-49 | -1.69E-46 |
| MS.gene050992 | MS.gene86937 | 0.814896 | 1.22E-51 | -1.69E-46 |
| MS.gene050992 | MS.gene91524 | 0.80935 | 1.98E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050992.t1 | MTR_8g023750 | 97.022 | 638 | 18 | 1 | 1 | 637 | 1 | 638 | 0.0 | 1293 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050992.t1 | AT2G46900 | 53.427 | 642 | 276 | 8 | 1 | 636 | 1 | 625 | 0.0 | 587 |
Find 123 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAATCTTCAACAGTTTA+TGG | 0.173934 | 8.3:-68475379 | MS.gene050992:CDS |
| TGCCTTGCTGGTTAACAAAT+TGG | 0.209445 | 8.3:+68475319 | None:intergenic |
| AATGAGCTGATAAGAATATT+TGG | 0.245244 | 8.3:-68478237 | MS.gene050992:CDS |
| TTTAGGATCCACTTGTAATA+TGG | 0.250493 | 8.3:+68478275 | None:intergenic |
| AGACTTGATCTTAGAAGATT+TGG | 0.252397 | 8.3:-68478397 | MS.gene050992:CDS |
| TAATGCTGTTTCCGGTAAAA+AGG | 0.258321 | 8.3:-68478436 | MS.gene050992:CDS |
| GAACGGTCTTCTTAAGATTA+TGG | 0.266888 | 8.3:+68478130 | None:intergenic |
| AGCAAGGATAATGCTGTTTC+CGG | 0.285860 | 8.3:-68478444 | MS.gene050992:CDS |
| TGTTTGATCTGATCGGAAAA+AGG | 0.294076 | 8.3:+68475929 | None:intergenic |
| TCGAGAGAAATTATCTTATA+TGG | 0.295069 | 8.3:-68475869 | MS.gene050992:CDS |
| AATATTCTGCCATTGTTAGA+AGG | 0.301694 | 8.3:+68476507 | None:intergenic |
| AAAGCAATTAATGACATAAA+TGG | 0.304083 | 8.3:-68476572 | MS.gene050992:CDS |
| ACAATCAACCAAGCAGTTCT+AGG | 0.318006 | 8.3:-68478179 | MS.gene050992:CDS |
| GAGCATGGCCATTGCCTTGC+TGG | 0.333728 | 8.3:+68475307 | None:intergenic |
| GTCGGTGAGAGACGATAATA+AGG | 0.337030 | 8.3:-68478547 | MS.gene050992:CDS |
| ATAAAAGTGATAACTCTATA+TGG | 0.338321 | 8.3:-68476157 | MS.gene050992:CDS |
| GATAAGAATATTTGGATCTA+AGG | 0.341346 | 8.3:-68478229 | MS.gene050992:CDS |
| CTTCAAACGATCTCTGATAC+TGG | 0.350800 | 8.3:+68476600 | None:intergenic |
| AAGGGCAGGGGAGGCTATGC+TGG | 0.351572 | 8.3:-68475349 | MS.gene050992:CDS |
| GGACAAAAGTAGAGCTGTTA+AGG | 0.355106 | 8.3:-68478310 | MS.gene050992:CDS |
| AGAACGGATATCACTACTTT+AGG | 0.361170 | 8.3:-68478041 | MS.gene050992:intron |
| GAAAATCTTCAACAGTTTAT+GGG | 0.364509 | 8.3:-68475378 | MS.gene050992:CDS |
| TATCGTGTTTGTACTTCAAT+TGG | 0.364526 | 8.3:+68476378 | None:intergenic |
| ATTTATGTCATTAATTGCTT+TGG | 0.378083 | 8.3:+68476574 | None:intergenic |
| GCATTGACTACTTTGCTCTA+AGG | 0.389212 | 8.3:-68476220 | MS.gene050992:CDS |
| CTGTCACAGATCTGCTTTAG+AGG | 0.390454 | 8.3:-68476297 | MS.gene050992:CDS |
| CATGGGAGCCAAGTGTTTGC+TGG | 0.397571 | 8.3:+68478099 | None:intergenic |
| GTGAAAAGAGCTGTGAATAA+AGG | 0.408438 | 8.3:+68476347 | None:intergenic |
| AGCATAGCCTCCCCTGCCCT+TGG | 0.424349 | 8.3:+68475351 | None:intergenic |
| TGGGATTGCCGTTACTGAAT+CGG | 0.425461 | 8.3:+68475404 | None:intergenic |
| AGAATCAACACAAGCATCTT+CGG | 0.432094 | 8.3:+68476073 | None:intergenic |
| GGCAGAATATTTCAAGGTAG+TGG | 0.433494 | 8.3:-68476495 | MS.gene050992:CDS |
| TGTCAGGTATGGACATTTGT+TGG | 0.449537 | 8.3:-68475439 | MS.gene050992:intron |
| TCGAAGGGGTTGATTGTTGA+AGG | 0.470411 | 8.3:+68479614 | None:intergenic |
| TGTGACAGCCTCGTCGATCC+AGG | 0.472006 | 8.3:+68476312 | None:intergenic |
| GTCTGAGGAGTATGCATGGC+TGG | 0.473897 | 8.3:-68476198 | MS.gene050992:CDS |
| GTGGGTGAACAACAGATGTC+TGG | 0.477922 | 8.3:-68476476 | MS.gene050992:CDS |
| AACAATGGCAGAATATTTCA+AGG | 0.483635 | 8.3:-68476501 | MS.gene050992:CDS |
| CAAAACGATGTCGGGTCGAT+TGG | 0.487749 | 8.3:-68479741 | None:intergenic |
| CTTTATTTCAAGAAATTCCA+TGG | 0.488823 | 8.3:+68478062 | None:intergenic |
| TTTATGGGCATTCCAAGGGC+AGG | 0.493998 | 8.3:-68475363 | MS.gene050992:CDS |
| GAAACTCGCAAAACGATGTC+GGG | 0.496514 | 8.3:-68479749 | None:intergenic |
| TTATCTTGCTCGCCGTCACC+AGG | 0.496909 | 8.3:+68475189 | None:intergenic |
| AACAGTTTATGGGCATTCCA+AGG | 0.499072 | 8.3:-68475368 | MS.gene050992:CDS |
| CTTCGGAGGCCGCGCGCTCA+AGG | 0.503411 | 8.3:+68476090 | None:intergenic |
| GCTACCGTGGGTTACTTATG+AGG | 0.505040 | 8.3:-68475235 | MS.gene050992:CDS |
| AGAAGGGAATCTATGTGATA+AGG | 0.508005 | 8.3:+68476524 | None:intergenic |
| CGCATCTGCCTAGAACTGCT+TGG | 0.516026 | 8.3:+68478171 | None:intergenic |
| TCCCACATTCACGCCACTGC+AGG | 0.518120 | 8.3:-68476408 | MS.gene050992:CDS |
| ACTAGCTTCTTTATAACTGA+AGG | 0.523607 | 8.3:+68476002 | None:intergenic |
| CTCAAGGTAAAACCGACAAA+TGG | 0.528352 | 8.3:+68476106 | None:intergenic |
| ATGTGATGATTCTTTGTCCA+TGG | 0.531302 | 8.3:-68478079 | MS.gene050992:CDS |
| GGGCATTCCAAGGGCAGGGG+AGG | 0.532957 | 8.3:-68475358 | MS.gene050992:CDS |
| CTAGGCAGATGCGAGGGGTG+AGG | 0.533173 | 8.3:-68478161 | MS.gene050992:CDS |
| GATGATAATGAACAAGAAGA+AGG | 0.536101 | 8.3:-68479647 | MS.gene050992:CDS |
| TCACCAGGTTGGTTAACATC+AGG | 0.536619 | 8.3:+68475204 | None:intergenic |
| ACTAGATTCTGATGATCCCA+TGG | 0.539097 | 8.3:-68476255 | MS.gene050992:CDS |
| CTTGCTCGCCGTCACCAGGT+TGG | 0.539532 | 8.3:+68475193 | None:intergenic |
| ATATTCTGCCATTGTTAGAA+GGG | 0.544386 | 8.3:+68476508 | None:intergenic |
| GTCCATGCACGATCTTTCAA+TGG | 0.544801 | 8.3:+68475969 | None:intergenic |
| TTGTCACTCCAGCAAACACT+TGG | 0.547319 | 8.3:-68478107 | MS.gene050992:CDS |
| CCCTGCAGTGGCGTGAATGT+GGG | 0.547959 | 8.3:+68476407 | None:intergenic |
| TATGGGCATTCCAAGGGCAG+GGG | 0.549439 | 8.3:-68475361 | MS.gene050992:CDS |
| TGCTGTCTCCATATTACAAG+TGG | 0.550086 | 8.3:-68478283 | MS.gene050992:CDS |
| GCAGTTCTAGGCAGATGCGA+GGG | 0.550442 | 8.3:-68478167 | MS.gene050992:CDS |
| GAAGAATAAGAAGAAAAGCA+AGG | 0.553422 | 8.3:-68478460 | MS.gene050992:CDS |
| CTAGATTCTGATGATCCCAT+GGG | 0.560564 | 8.3:-68476254 | MS.gene050992:CDS |
| TTATGGGCATTCCAAGGGCA+GGG | 0.560838 | 8.3:-68475362 | MS.gene050992:CDS |
| TTTGTTAACCAGCAAGGCAA+TGG | 0.563599 | 8.3:-68475315 | MS.gene050992:CDS |
| GCAGAATATTTCAAGGTAGT+GGG | 0.565131 | 8.3:-68476494 | MS.gene050992:CDS |
| CGATCTCTGATACTGGGAGT+AGG | 0.565183 | 8.3:+68476607 | None:intergenic |
| GAATTCCTGTTTGATCTGAT+CGG | 0.570429 | 8.3:+68475922 | None:intergenic |
| TACCATTGAAAGATCGTGCA+TGG | 0.570738 | 8.3:-68475971 | MS.gene050992:CDS |
| CAAAAGTAGAGCTGTTAAGG+AGG | 0.574585 | 8.3:-68478307 | MS.gene050992:CDS |
| ATAAAAGTGAAGTTAACGAT+TGG | 0.579495 | 8.3:-68475779 | MS.gene050992:CDS |
| TGGTGCTGCAAAACAAGTCA+TGG | 0.582471 | 8.3:-68475817 | MS.gene050992:CDS |
| GAATTTCTTGAAATAAAGAA+CGG | 0.583327 | 8.3:-68478057 | MS.gene050992:CDS |
| TGATTTCTCCGATTCAGTAA+CGG | 0.585040 | 8.3:-68475412 | MS.gene050992:CDS |
| TGATTCTGAACCCGAAAACC+AGG | 0.585818 | 8.3:-68479576 | MS.gene050992:intron |
| ACAGTTTATGGGCATTCCAA+GGG | 0.585828 | 8.3:-68475367 | MS.gene050992:CDS |
| ACCCTGCAGTGGCGTGAATG+TGG | 0.585995 | 8.3:+68476406 | None:intergenic |
| CTCTGATACTGGGAGTAGGA+TGG | 0.589025 | 8.3:+68476611 | None:intergenic |
| TTGTCATTGAGAAGATCGAA+GGG | 0.590886 | 8.3:+68479599 | None:intergenic |
| CTACTTTGCTCTAAGGTCTG+AGG | 0.592546 | 8.3:-68476213 | MS.gene050992:CDS |
| AACCAATTTGTTAACCAGCA+AGG | 0.592699 | 8.3:-68475321 | MS.gene050992:CDS |
| TTGCAACACCACGAGGAGCA+TGG | 0.593616 | 8.3:+68475292 | None:intergenic |
| ATTTGAGTCGATGCTACCGT+GGG | 0.594754 | 8.3:-68475247 | MS.gene050992:CDS |
| TTCAAACGATCTCTGATACT+GGG | 0.597140 | 8.3:+68476601 | None:intergenic |
| TTAATCAAGTGATCTTGAGA+TGG | 0.599577 | 8.3:+68475900 | None:intergenic |
| GATGTTAACCAACCTGGTGA+CGG | 0.603495 | 8.3:-68475201 | MS.gene050992:CDS |
| CCGTGGGTTACTTATGAGGA+AGG | 0.604107 | 8.3:-68475231 | MS.gene050992:CDS |
| CATAGATTCCCTTCTAACAA+TGG | 0.604190 | 8.3:-68476516 | MS.gene050992:CDS |
| GAGCAACATGTTTCTACTGA+AGG | 0.612830 | 8.3:-68478351 | MS.gene050992:CDS |
| AGGAAAAGCAGTGAATGCTA+AGG | 0.612882 | 8.3:-68478331 | MS.gene050992:CDS |
| GGTAAAACCGACAAATGGCA+AGG | 0.613446 | 8.3:+68476111 | None:intergenic |
| ATTGTCATTGAGAAGATCGA+AGG | 0.619025 | 8.3:+68479598 | None:intergenic |
| AGAGAAATTATCTTATATGG+AGG | 0.619706 | 8.3:-68475866 | MS.gene050992:CDS |
| AATTGGCAATTACCCTGCAG+TGG | 0.620670 | 8.3:+68476395 | None:intergenic |
| AGCAGTTCTAGGCAGATGCG+AGG | 0.622161 | 8.3:-68478168 | MS.gene050992:CDS |
| TAAGGTCTGAGGAGTATGCA+TGG | 0.622614 | 8.3:-68476202 | MS.gene050992:CDS |
| GGCAATGGCCATGCTCCTCG+TGG | 0.629627 | 8.3:-68475300 | MS.gene050992:CDS |
| GTTGATTGTTGAAGGTGCAG+TGG | 0.633548 | 8.3:+68479622 | None:intergenic |
| GTTTGCTGGAGTGACAAGAA+CGG | 0.641607 | 8.3:+68478113 | None:intergenic |
| TATTTGAGTCGATGCTACCG+TGG | 0.643054 | 8.3:-68475248 | MS.gene050992:CDS |
| CCCACATTCACGCCACTGCA+GGG | 0.646230 | 8.3:-68476407 | MS.gene050992:CDS |
| GTAAAACCGACAAATGGCAA+GGG | 0.648123 | 8.3:+68476112 | None:intergenic |
| GGACCTGATGTTAACCAACC+TGG | 0.650013 | 8.3:-68475207 | MS.gene050992:CDS |
| ATGGACAAAGAATCATCACA+TGG | 0.659499 | 8.3:+68478081 | None:intergenic |
| TATATGCGCTTGAATGTGCA+TGG | 0.664449 | 8.3:-68476433 | MS.gene050992:CDS |
| CAGTTCTAGGCAGATGCGAG+GGG | 0.665952 | 8.3:-68478166 | MS.gene050992:CDS |
| TGGGTTACTTATGAGGAAGG+TGG | 0.669868 | 8.3:-68475228 | MS.gene050992:CDS |
| GGGAATCTATGTGATAAGGA+CGG | 0.676526 | 8.3:+68476528 | None:intergenic |
| TTTCTATTTGCAACACCACG+AGG | 0.682690 | 8.3:+68475285 | None:intergenic |
| ATCAACACAAGCATCTTCGG+AGG | 0.682882 | 8.3:+68476076 | None:intergenic |
| CCTTCCTCATAAGTAACCCA+CGG | 0.683237 | 8.3:+68475231 | None:intergenic |
| TGAGTCTGCGGATGAAACGT+CGG | 0.688650 | 8.3:-68478565 | MS.gene050992:CDS |
| TGAGAGACGATAATAAGGAG+AGG | 0.693389 | 8.3:-68478542 | MS.gene050992:CDS |
| TGGACAAAGAATCATCACAT+GGG | 0.713811 | 8.3:+68478082 | None:intergenic |
| TAGATTCTGATGATCCCATG+GGG | 0.715010 | 8.3:-68476253 | MS.gene050992:CDS |
| TGTCATTGAGAAGATCGAAG+GGG | 0.729759 | 8.3:+68479600 | None:intergenic |
| TGTCTGGAGATACTATTGCG+AGG | 0.734057 | 8.3:-68476460 | MS.gene050992:CDS |
| ATTGCAGGGAGATGAGTCTG+CGG | 0.754277 | 8.3:-68478577 | MS.gene050992:intron |
| AGATTCTGATGATCCCATGG+GGG | 0.759992 | 8.3:-68476252 | MS.gene050992:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGGAAAATAAAAATAAAATA+TGG | + | chr8.3:68477346-68477365 | None:intergenic | 10.0% |
| !! | GGAAAATAAAAATAAAATAT+GGG | + | chr8.3:68477345-68477364 | None:intergenic | 10.0% |
| !! | TGTAAAATATAATCAATATT+TGG | + | chr8.3:68477247-68477266 | None:intergenic | 10.0% |
| !!! | TAAATATTTGATGTTTTTTT+GGG | + | chr8.3:68479292-68479311 | None:intergenic | 10.0% |
| !!! | TTAAATATTTGATGTTTTTT+TGG | + | chr8.3:68479293-68479312 | None:intergenic | 10.0% |
| !! | AATAGAAAAAATAACATGAT+GGG | - | chr8.3:68477203-68477222 | MS.gene050992:intron | 15.0% |
| !! | CACAATCTAATATATATATA+TGG | - | chr8.3:68477279-68477298 | MS.gene050992:intron | 15.0% |
| !! | TATTTAATGAAAACAACTTA+TGG | + | chr8.3:68476061-68476080 | None:intergenic | 15.0% |
| !! | TGTTATATAAAGAATGATAT+AGG | - | chr8.3:68475915-68475934 | MS.gene050992:CDS | 15.0% |
| !!! | AATAAAAAAAATTTAGAACC+TGG | + | chr8.3:68475361-68475380 | None:intergenic | 15.0% |
| !!! | ATATTTTGTATTTTGTGTAA+TGG | - | chr8.3:68478150-68478169 | MS.gene050992:CDS | 15.0% |
| !!! | ATTTATAATATTTTGTGCTT+TGG | - | chr8.3:68476928-68476947 | MS.gene050992:intron | 15.0% |
| !! | AAACCAATAATCTATCTTTA+AGG | + | chr8.3:68476249-68476268 | None:intergenic | 20.0% |
| !! | AAAGCAATTAATGACATAAA+TGG | - | chr8.3:68478344-68478363 | MS.gene050992:CDS | 20.0% |
| !! | AAGTATTATAGAAAATGACA+TGG | - | chr8.3:68475577-68475596 | MS.gene050992:intron | 20.0% |
| !! | AGAACTTTGAACAAAAAAAA+AGG | - | chr8.3:68477161-68477180 | MS.gene050992:intron | 20.0% |
| !! | AGTATTATAGAAAATGACAT+GGG | - | chr8.3:68475578-68475597 | MS.gene050992:intron | 20.0% |
| !! | ATAAAAGTGATAACTCTATA+TGG | - | chr8.3:68478759-68478778 | MS.gene050992:intron | 20.0% |
| !! | ATATCTACAAAGTAAAAAAG+AGG | + | chr8.3:68478276-68478295 | None:intergenic | 20.0% |
| !! | ATATTGCATAATTCAACATT+TGG | + | chr8.3:68477784-68477803 | None:intergenic | 20.0% |
| !! | ATTTATGTCATTAATTGCTT+TGG | + | chr8.3:68478345-68478364 | None:intergenic | 20.0% |
| !! | GAATAGAAAAAATAACATGA+TGG | - | chr8.3:68477202-68477221 | MS.gene050992:intron | 20.0% |
| !! | GAATTTCTTGAAATAAAGAA+CGG | - | chr8.3:68476859-68476878 | MS.gene050992:intron | 20.0% |
| !! | TAATTCAATAGTGTTAGTTA+TGG | - | chr8.3:68475530-68475549 | MS.gene050992:intron | 20.0% |
| !! | TATCTACAAAGTAAAAAAGA+GGG | + | chr8.3:68478275-68478294 | None:intergenic | 20.0% |
| !! | TATTTATGATCTTCAAAACT+TGG | - | chr8.3:68479361-68479380 | MS.gene050992:intron | 20.0% |
| !! | TCATTCTTTATATAACAATG+TGG | + | chr8.3:68475912-68475931 | None:intergenic | 20.0% |
| !! | TGTATATAAGGTTCATATTA+GGG | - | chr8.3:68477698-68477717 | MS.gene050992:intron | 20.0% |
| !! | TTACCTTAAAGATAGATTAT+TGG | - | chr8.3:68476243-68476262 | MS.gene050992:CDS | 20.0% |
| !! | TTATAAGCTAAAAGTGAATT+GGG | - | chr8.3:68475454-68475473 | MS.gene050992:intron | 20.0% |
| !! | TTCAATCACAGATTAAAATA+GGG | + | chr8.3:68478178-68478197 | None:intergenic | 20.0% |
| !! | TTGTATATAAGGTTCATATT+AGG | - | chr8.3:68477697-68477716 | MS.gene050992:intron | 20.0% |
| !! | TTTATAAGCTAAAAGTGAAT+TGG | - | chr8.3:68475453-68475472 | MS.gene050992:intron | 20.0% |
| !!! | AGAATGATATAGGTTTTAAT+TGG | - | chr8.3:68475925-68475944 | MS.gene050992:CDS | 20.0% |
| !!! | AGGAAATATCAATTAGTTTA+TGG | - | chr8.3:68477922-68477941 | MS.gene050992:intron | 20.0% |
| !!! | ATGTTATTTTTTCTATTCCA+AGG | + | chr8.3:68477200-68477219 | None:intergenic | 20.0% |
| !!! | TTCTTCTTTTTCTTTGATTT+TGG | + | chr8.3:68476442-68476461 | None:intergenic | 20.0% |
| ! | AAAACTTATGAACATCTCAT+AGG | - | chr8.3:68475756-68475775 | MS.gene050992:CDS | 25.0% |
| ! | AATGAGCTGATAAGAATATT+TGG | - | chr8.3:68476679-68476698 | MS.gene050992:intron | 25.0% |
| ! | AGAAAATCTTCAACAGTTTA+TGG | - | chr8.3:68479537-68479556 | MS.gene050992:intron | 25.0% |
| ! | AGAGAAATTATCTTATATGG+AGG | - | chr8.3:68479050-68479069 | MS.gene050992:intron | 25.0% |
| ! | ATAAAAGTGAAGTTAACGAT+TGG | - | chr8.3:68479137-68479156 | MS.gene050992:intron | 25.0% |
| ! | ATGGGAAAATTAATTTCGTT+GGG | - | chr8.3:68477221-68477240 | MS.gene050992:intron | 25.0% |
| ! | ATTGAATAAGCTTAACAGTT+GGG | - | chr8.3:68475886-68475905 | MS.gene050992:CDS | 25.0% |
| ! | CATAAAAATAATGTATTGCG+AGG | - | chr8.3:68477902-68477921 | MS.gene050992:intron | 25.0% |
| ! | CTTCAATCACAGATTAAAAT+AGG | + | chr8.3:68478179-68478198 | None:intergenic | 25.0% |
| ! | GAAAATCTTCAACAGTTTAT+GGG | - | chr8.3:68479538-68479557 | MS.gene050992:intron | 25.0% |
| ! | GATAAGAATATTTGGATCTA+AGG | - | chr8.3:68476687-68476706 | MS.gene050992:intron | 25.0% |
| ! | GTAGAACTGCAATATATATA+AGG | + | chr8.3:68477727-68477746 | None:intergenic | 25.0% |
| ! | GTTAGCTAAAAATTCTAACT+TGG | - | chr8.3:68475476-68475495 | MS.gene050992:intron | 25.0% |
| ! | TATTGAATAAGCTTAACAGT+TGG | - | chr8.3:68475885-68475904 | MS.gene050992:CDS | 25.0% |
| ! | TCGAGAGAAATTATCTTATA+TGG | - | chr8.3:68479047-68479066 | MS.gene050992:intron | 25.0% |
| ! | TCTATAAATGTCGTTAAAGA+TGG | + | chr8.3:68479333-68479352 | None:intergenic | 25.0% |
| ! | TGGTGCAAATTATTTCAAAT+TGG | - | chr8.3:68479381-68479400 | MS.gene050992:intron | 25.0% |
| ! | TTATCTTCATGATAATTGTG+AGG | - | chr8.3:68477803-68477822 | MS.gene050992:intron | 25.0% |
| !! | ACATATTCACTGAACTTTTA+GGG | + | chr8.3:68477499-68477518 | None:intergenic | 25.0% |
| !! | CTTTATTTCAAGAAATTCCA+TGG | + | chr8.3:68476857-68476876 | None:intergenic | 25.0% |
| !! | TATTCTTATCAGCTCATTTT+CGG | + | chr8.3:68476677-68476696 | None:intergenic | 25.0% |
| !! | TTTTCATAAGCTCTCTTAAA+CGG | - | chr8.3:68476138-68476157 | MS.gene050992:CDS | 25.0% |
| !!! | AAAATTCCCGTTTACTTTTA+CGG | - | chr8.3:68479234-68479253 | MS.gene050992:intron | 25.0% |
| !!! | AAAATTTAGAACCTGGTTTT+CGG | + | chr8.3:68475354-68475373 | None:intergenic | 25.0% |
| !!! | ATTATGTGCTTTATTTGTGT+TGG | - | chr8.3:68478116-68478135 | MS.gene050992:CDS | 25.0% |
| !!! | TTTGTATGTGCTTATTTCTA+TGG | + | chr8.3:68477076-68477095 | None:intergenic | 25.0% |
| AAAACCTTCAATCGAATGAT+TGG | - | chr8.3:68477983-68478002 | MS.gene050992:intron | 30.0% | |
| AACAATGGCAGAATATTTCA+AGG | - | chr8.3:68478415-68478434 | MS.gene050992:CDS | 30.0% | |
| AAGAATGCCGTAAAAGTAAA+CGG | + | chr8.3:68479244-68479263 | None:intergenic | 30.0% | |
| AAGTTATGAATGAGTACATG+TGG | - | chr8.3:68479430-68479449 | MS.gene050992:intron | 30.0% | |
| AATATAACACTATAACGCCA+TGG | + | chr8.3:68475869-68475888 | None:intergenic | 30.0% | |
| AATATTCTGCCATTGTTAGA+AGG | + | chr8.3:68478412-68478431 | None:intergenic | 30.0% | |
| AATGAGCTACTAATGCAAAA+GGG | + | chr8.3:68477474-68477493 | None:intergenic | 30.0% | |
| ACTAGTATATATCGCATCTA+TGG | + | chr8.3:68477848-68477867 | None:intergenic | 30.0% | |
| ACTGTGGACAATTGTATATA+AGG | - | chr8.3:68477686-68477705 | MS.gene050992:intron | 30.0% | |
| AGACTTGATCTTAGAAGATT+TGG | - | chr8.3:68476519-68476538 | MS.gene050992:CDS | 30.0% | |
| ATAAATTAACCTCCAATTGC+CGG | - | chr8.3:68477647-68477666 | MS.gene050992:intron | 30.0% | |
| ATAGATGCGATATATACTAG+TGG | - | chr8.3:68477847-68477866 | MS.gene050992:intron | 30.0% | |
| ATATAACACTATAACGCCAT+GGG | + | chr8.3:68475868-68475887 | None:intergenic | 30.0% | |
| ATATATATGGAGCCTAGTAT+GGG | - | chr8.3:68477292-68477311 | MS.gene050992:intron | 30.0% | |
| ATATTCTGCCATTGTTAGAA+GGG | + | chr8.3:68478411-68478430 | None:intergenic | 30.0% | |
| ATGTCTGGTTGTATATGTAA+AGG | - | chr8.3:68476980-68476999 | MS.gene050992:intron | 30.0% | |
| CATGTTTATGATTCGATAGT+AGG | + | chr8.3:68477047-68477066 | None:intergenic | 30.0% | |
| CCTTATATTTAAGAGTCCAT+GGG | - | chr8.3:68477315-68477334 | MS.gene050992:intron | 30.0% | |
| GAAGAATAAGAAGAAAAGCA+AGG | - | chr8.3:68476456-68476475 | MS.gene050992:CDS | 30.0% | |
| GAAGAATCAAACATAGAACA+TGG | - | chr8.3:68477117-68477136 | MS.gene050992:intron | 30.0% | |
| GATGGGAAAATTAATTTCGT+TGG | - | chr8.3:68477220-68477239 | MS.gene050992:intron | 30.0% | |
| GTAGTTAAAAGGGATTCAAA+AGG | + | chr8.3:68478245-68478264 | None:intergenic | 30.0% | |
| TACTCATTCATAACTTCGAT+TGG | + | chr8.3:68479426-68479445 | None:intergenic | 30.0% | |
| TATATATATGGAGCCTAGTA+TGG | - | chr8.3:68477291-68477310 | MS.gene050992:intron | 30.0% | |
| TATCGTGTTTGTACTTCAAT+TGG | + | chr8.3:68478541-68478560 | None:intergenic | 30.0% | |
| TCTATTCCAAGGTCTTAAAT+TGG | + | chr8.3:68477189-68477208 | None:intergenic | 30.0% | |
| TTAAATATAAGGCCCATACT+AGG | + | chr8.3:68477307-68477326 | None:intergenic | 30.0% | |
| TTAATCAAGTGATCTTGAGA+TGG | + | chr8.3:68479019-68479038 | None:intergenic | 30.0% | |
| TTTGTTCAAAGTTCTTCGTA+AGG | + | chr8.3:68477156-68477175 | None:intergenic | 30.0% | |
| ! | AACTGTTGAAGATTTTCTTG+TGG | + | chr8.3:68479535-68479554 | None:intergenic | 30.0% |
| ! | ACTAGCTTCTTTATAACTGA+AGG | + | chr8.3:68478917-68478936 | None:intergenic | 30.0% |
| ! | ACTGTTGAAGATTTTCTTGT+GGG | + | chr8.3:68479534-68479553 | None:intergenic | 30.0% |
| ! | GACATATTCACTGAACTTTT+AGG | + | chr8.3:68477500-68477519 | None:intergenic | 30.0% |
| ! | GATGATAATGAACAAGAAGA+AGG | - | chr8.3:68475269-68475288 | MS.gene050992:CDS | 30.0% |
| ! | TGGCTTTTGTATTTGGAAAT+AGG | - | chr8.3:68475496-68475515 | MS.gene050992:intron | 30.0% |
| ! | TTTACAATCTTTTGCTTGTC+AGG | - | chr8.3:68479461-68479480 | MS.gene050992:intron | 30.0% |
| ! | TTTAGGATCCACTTGTAATA+TGG | + | chr8.3:68476644-68476663 | None:intergenic | 30.0% |
| ! | TTTTCATAAGCTCTCTCAAA+TGG | - | chr8.3:68475789-68475808 | MS.gene050992:CDS | 30.0% |
| !! | AAATTTAGAACCTGGTTTTC+GGG | + | chr8.3:68475353-68475372 | None:intergenic | 30.0% |
| !! | AATTTGGTTGTATTGATTGC+AGG | - | chr8.3:68476324-68476343 | MS.gene050992:CDS | 30.0% |
| !! | ATTTGGTTGTATTGATTGCA+GGG | - | chr8.3:68476325-68476344 | MS.gene050992:CDS | 30.0% |
| !! | TCTAACTTGGCTTTTGTATT+TGG | - | chr8.3:68475489-68475508 | MS.gene050992:intron | 30.0% |
| !!! | ATATTTTGTGCTTTGGCTTT+TGG | - | chr8.3:68476935-68476954 | MS.gene050992:intron | 30.0% |
| !!! | ATTCCATTGGTTTTGACTTT+TGG | - | chr8.3:68478033-68478052 | MS.gene050992:intron | 30.0% |
| !!! | TATTTTGTGCTTTGGCTTTT+GGG | - | chr8.3:68476936-68476955 | MS.gene050992:intron | 30.0% |
| !!! | TTCCATTGGTTTTGACTTTT+GGG | - | chr8.3:68478034-68478053 | MS.gene050992:intron | 30.0% |
| AAAGATGTTGTGTCCATTGA+TGG | - | chr8.3:68477094-68477113 | MS.gene050992:intron | 35.0% | |
| AACCCAAAAGTCAAAACCAA+TGG | + | chr8.3:68478039-68478058 | None:intergenic | 35.0% | |
| AAGATGTTGTGTCCATTGAT+GGG | - | chr8.3:68477095-68477114 | MS.gene050992:intron | 35.0% | |
| ACCCAGTTGCAAAATTCAAA+AGG | + | chr8.3:68475426-68475445 | None:intergenic | 35.0% | |
| AGAACGGATATCACTACTTT+AGG | - | chr8.3:68476875-68476894 | MS.gene050992:intron | 35.0% | |
| AGAAGGGAATCTATGTGATA+AGG | + | chr8.3:68478395-68478414 | None:intergenic | 35.0% | |
| AGAATCAACACAAGCATCTT+CGG | + | chr8.3:68478846-68478865 | None:intergenic | 35.0% | |
| AGAATGCCGTAAAAGTAAAC+GGG | + | chr8.3:68479243-68479262 | None:intergenic | 35.0% | |
| AGGGTTGAACAGTAGTTAAA+AGG | + | chr8.3:68478256-68478275 | None:intergenic | 35.0% | |
| ATAAAATATGGGTTCACCCA+TGG | + | chr8.3:68477334-68477353 | None:intergenic | 35.0% | |
| ATGGACAAAGAATCATCACA+TGG | + | chr8.3:68476838-68476857 | None:intergenic | 35.0% | |
| ATGTGATGATTCTTTGTCCA+TGG | - | chr8.3:68476837-68476856 | MS.gene050992:intron | 35.0% | |
| ATTGTCATTGAGAAGATCGA+AGG | + | chr8.3:68475321-68475340 | None:intergenic | 35.0% | |
| CAATCCAATCATTCGATTGA+AGG | + | chr8.3:68477990-68478009 | None:intergenic | 35.0% | |
| CAATTGCCGGTAAAAACAAT+GGG | - | chr8.3:68477660-68477679 | MS.gene050992:intron | 35.0% | |
| CACTGCAAAAAGAGTGAAAA+TGG | - | chr8.3:68477621-68477640 | MS.gene050992:intron | 35.0% | |
| CATAGATTCCCTTCTAACAA+TGG | - | chr8.3:68478400-68478419 | MS.gene050992:CDS | 35.0% | |
| CCCAGTTGCAAAATTCAAAA+GGG | + | chr8.3:68475425-68475444 | None:intergenic | 35.0% | |
| CCCATGGACTCTTAAATATA+AGG | + | chr8.3:68477318-68477337 | None:intergenic | 35.0% | |
| CTTCTTTCTATAAAGCTCTC+TGG | + | chr8.3:68476086-68476105 | None:intergenic | 35.0% | |
| GAACGGTCTTCTTAAGATTA+TGG | + | chr8.3:68476789-68476808 | None:intergenic | 35.0% | |
| GAATGAGCTACTAATGCAAA+AGG | + | chr8.3:68477475-68477494 | None:intergenic | 35.0% | |
| GAATGATTGGATTGCATGAA+GGG | - | chr8.3:68477996-68478015 | MS.gene050992:intron | 35.0% | |
| GAATTCCTGTTTGATCTGAT+CGG | + | chr8.3:68478997-68479016 | None:intergenic | 35.0% | |
| GCAAGGGAAAAAGAGAAATT+TGG | + | chr8.3:68478791-68478810 | None:intergenic | 35.0% | |
| GCAGAATATTTCAAGGTAGT+GGG | - | chr8.3:68478422-68478441 | MS.gene050992:CDS | 35.0% | |
| GCCTTATATTTAAGAGTCCA+TGG | - | chr8.3:68477314-68477333 | MS.gene050992:intron | 35.0% | |
| GCTTATTGCTCATCTGAATT+TGG | - | chr8.3:68476308-68476327 | MS.gene050992:CDS | 35.0% | |
| GCTTATTTAAGCTTACCTAC+TGG | + | chr8.3:68475832-68475851 | None:intergenic | 35.0% | |
| GGGTTGAACAGTAGTTAAAA+GGG | + | chr8.3:68478255-68478274 | None:intergenic | 35.0% | |
| GGTTGTATATGTAAAGGCTA+AGG | - | chr8.3:68476986-68477005 | MS.gene050992:intron | 35.0% | |
| GGTTTATGGTTAACAAGAGT+GGG | - | chr8.3:68478055-68478074 | MS.gene050992:CDS | 35.0% | |
| GTGAAAAGAGCTGTGAATAA+AGG | + | chr8.3:68478572-68478591 | None:intergenic | 35.0% | |
| TAAGATGCAGTGAATCATTG+TGG | + | chr8.3:68477530-68477549 | None:intergenic | 35.0% | |
| TGATTTCTCCGATTCAGTAA+CGG | - | chr8.3:68479504-68479523 | MS.gene050992:intron | 35.0% | |
| TGGACAAAGAATCATCACAT+GGG | + | chr8.3:68476837-68476856 | None:intergenic | 35.0% | |
| TGTTTGATCTGATCGGAAAA+AGG | + | chr8.3:68478990-68479009 | None:intergenic | 35.0% | |
| TGTTTGATTCTTCCCATCAA+TGG | + | chr8.3:68477110-68477129 | None:intergenic | 35.0% | |
| TTCAAACGATCTCTGATACT+GGG | + | chr8.3:68478318-68478337 | None:intergenic | 35.0% | |
| TTGATACAAAGGACGCTAAT+AGG | + | chr8.3:68477429-68477448 | None:intergenic | 35.0% | |
| TTGTCATTGAGAAGATCGAA+GGG | + | chr8.3:68475320-68475339 | None:intergenic | 35.0% | |
| TTTCACTCACATGAAAAACC+TGG | - | chr8.3:68478586-68478605 | MS.gene050992:intron | 35.0% | |
| ! | AAGGTTCCAATTTAAGACCT+TGG | - | chr8.3:68477180-68477199 | MS.gene050992:intron | 35.0% |
| ! | AATCTTTTGCTTGTCAGGTA+TGG | - | chr8.3:68479466-68479485 | MS.gene050992:intron | 35.0% |
| ! | ACCCTTTTGAATTTTGCAAC+TGG | - | chr8.3:68475421-68475440 | MS.gene050992:CDS | 35.0% |
| ! | ATATGCACAGTTGATTCCAT+TGG | - | chr8.3:68478020-68478039 | MS.gene050992:intron | 35.0% |
| ! | CATAGGGTTTTCTATCTATC+TGG | - | chr8.3:68478087-68478106 | MS.gene050992:CDS | 35.0% |
| ! | CCCTTTTGAATTTTGCAACT+GGG | - | chr8.3:68475422-68475441 | MS.gene050992:CDS | 35.0% |
| ! | CTGACACAAGTCTTATATCT+GGG | - | chr8.3:68477364-68477383 | MS.gene050992:intron | 35.0% |
| ! | CTTTTCATCTCCCTTTTTAC+CGG | + | chr8.3:68476494-68476513 | None:intergenic | 35.0% |
| ! | TTTTCGGCACTCAAATGTTT+AGG | + | chr8.3:68476661-68476680 | None:intergenic | 35.0% |
| ! | TTTTTCCGATCAGATCAAAC+AGG | - | chr8.3:68478989-68479008 | MS.gene050992:intron | 35.0% |
| !! | AAACTCATTTTGCTGTCTCA+AGG | - | chr8.3:68477564-68477583 | MS.gene050992:intron | 35.0% |
| !! | AACCAATTTGTTAACCAGCA+AGG | - | chr8.3:68479595-68479614 | MS.gene050992:CDS | 35.0% |
| !! | AATGCTGTTTCCGGTAAAAA+GGG | - | chr8.3:68476481-68476500 | MS.gene050992:CDS | 35.0% |
| !! | CACATCACACTTTTGAAGAT+TGG | + | chr8.3:68477023-68477042 | None:intergenic | 35.0% |
| !! | CACTTACTCATTTTTCTCAG+AGG | + | chr8.3:68479188-68479207 | None:intergenic | 35.0% |
| !! | TAATGCTGTTTCCGGTAAAA+AGG | - | chr8.3:68476480-68476499 | MS.gene050992:CDS | 35.0% |
| !!! | GGTTTTGACTTTTGGGTTTA+TGG | - | chr8.3:68478041-68478060 | MS.gene050992:intron | 35.0% |
| AACAGTTTATGGGCATTCCA+AGG | - | chr8.3:68479548-68479567 | MS.gene050992:intron | 40.0% | |
| ACAATCAACCAAGCAGTTCT+AGG | - | chr8.3:68476737-68476756 | MS.gene050992:intron | 40.0% | |
| ACAGTTTATGGGCATTCCAA+GGG | - | chr8.3:68479549-68479568 | MS.gene050992:intron | 40.0% | |
| ACTAGATTCTGATGATCCCA+TGG | - | chr8.3:68478661-68478680 | MS.gene050992:intron | 40.0% | |
| AGGAAAAGCAGTGAATGCTA+AGG | - | chr8.3:68476585-68476604 | MS.gene050992:CDS | 40.0% | |
| AGTCAATCCAAACAAGCACA+TGG | - | chr8.3:68476188-68476207 | MS.gene050992:CDS | 40.0% | |
| ATACAAAGGACGCTAATAGG+TGG | + | chr8.3:68477426-68477445 | None:intergenic | 40.0% | |
| ATGCAAAAGGGTGAAGATAG+TGG | + | chr8.3:68477462-68477481 | None:intergenic | 40.0% | |
| ATGGTTAACAAGAGTGGGAT+TGG | - | chr8.3:68478060-68478079 | MS.gene050992:CDS | 40.0% | |
| CAAAAGTAGAGCTGTTAAGG+AGG | - | chr8.3:68476609-68476628 | MS.gene050992:CDS | 40.0% | |
| CCAATTGCCGGTAAAAACAA+TGG | - | chr8.3:68477659-68477678 | MS.gene050992:intron | 40.0% | |
| CCAGATATAAGACTTGTGTC+AGG | + | chr8.3:68477366-68477385 | None:intergenic | 40.0% | |
| CGAATGATTGGATTGCATGA+AGG | - | chr8.3:68477995-68478014 | MS.gene050992:intron | 40.0% | |
| CGGTAAAAAGGGAGATGAAA+AGG | - | chr8.3:68476492-68476511 | MS.gene050992:CDS | 40.0% | |
| CTAGATTCTGATGATCCCAT+GGG | - | chr8.3:68478662-68478681 | MS.gene050992:intron | 40.0% | |
| CTCAAGGTAAAACCGACAAA+TGG | + | chr8.3:68478813-68478832 | None:intergenic | 40.0% | |
| CTTAAACGGTCTCAGAAAGT+AGG | - | chr8.3:68476152-68476171 | MS.gene050992:CDS | 40.0% | |
| CTTCAAACGATCTCTGATAC+TGG | + | chr8.3:68478319-68478338 | None:intergenic | 40.0% | |
| GATCTGCAAAAACTGCTGAT+TGG | - | chr8.3:68479079-68479098 | MS.gene050992:intron | 40.0% | |
| GGACAAAAGTAGAGCTGTTA+AGG | - | chr8.3:68476606-68476625 | MS.gene050992:CDS | 40.0% | |
| GGCAGAATATTTCAAGGTAG+TGG | - | chr8.3:68478421-68478440 | MS.gene050992:CDS | 40.0% | |
| GGGAATCTATGTGATAAGGA+CGG | + | chr8.3:68478391-68478410 | None:intergenic | 40.0% | |
| GGGTTTATGGTTAACAAGAG+TGG | - | chr8.3:68478054-68478073 | MS.gene050992:CDS | 40.0% | |
| GTAAAACCGACAAATGGCAA+GGG | + | chr8.3:68478807-68478826 | None:intergenic | 40.0% | |
| TAAAAACAATGGGTGCACTG+TGG | - | chr8.3:68477670-68477689 | MS.gene050992:intron | 40.0% | |
| TACAACACCATGTGCTTGTT+TGG | + | chr8.3:68476198-68476217 | None:intergenic | 40.0% | |
| TACCATTGAAAGATCGTGCA+TGG | - | chr8.3:68478945-68478964 | MS.gene050992:intron | 40.0% | |
| TAGATTCTGATGATCCCATG+GGG | - | chr8.3:68478663-68478682 | MS.gene050992:intron | 40.0% | |
| TATATGCGCTTGAATGTGCA+TGG | - | chr8.3:68478483-68478502 | MS.gene050992:CDS | 40.0% | |
| TGAGAGACGATAATAAGGAG+AGG | - | chr8.3:68476374-68476393 | MS.gene050992:CDS | 40.0% | |
| TGCTGTCTCCATATTACAAG+TGG | - | chr8.3:68476633-68476652 | MS.gene050992:intron | 40.0% | |
| TGGGCAAGAATGTTGAATAG+CGG | - | chr8.3:68477383-68477402 | MS.gene050992:intron | 40.0% | |
| TGGTTAACAAGAGTGGGATT+GGG | - | chr8.3:68478061-68478080 | MS.gene050992:CDS | 40.0% | |
| TGTCAGGTATGGACATTTGT+TGG | - | chr8.3:68479477-68479496 | MS.gene050992:intron | 40.0% | |
| TGTCATTGAGAAGATCGAAG+GGG | + | chr8.3:68475319-68475338 | None:intergenic | 40.0% | |
| TTGCTCGTTCGAAAGAATGT+GGG | - | chr8.3:68476270-68476289 | MS.gene050992:CDS | 40.0% | |
| TTTCTATTTGCAACACCACG+AGG | + | chr8.3:68479634-68479653 | None:intergenic | 40.0% | |
| TTTGTTAACCAGCAAGGCAA+TGG | - | chr8.3:68479601-68479620 | MS.gene050992:CDS | 40.0% | |
| ! | ACGGCATTCTTTTGTAGAAG+TGG | - | chr8.3:68479253-68479272 | MS.gene050992:intron | 40.0% |
| ! | ATCAGCAGTTTTTGCAGATC+AGG | + | chr8.3:68479079-68479098 | None:intergenic | 40.0% |
| ! | CCTGACACAAGTCTTATATC+TGG | - | chr8.3:68477363-68477382 | MS.gene050992:intron | 40.0% |
| ! | CTGAGCAGAACTTTTTAACG+CGG | + | chr8.3:68476404-68476423 | None:intergenic | 40.0% |
| ! | GAGCAACATGTTTCTACTGA+AGG | - | chr8.3:68476565-68476584 | MS.gene050992:CDS | 40.0% |
| ! | TGCCTTGCTGGTTAACAAAT+TGG | + | chr8.3:68479600-68479619 | None:intergenic | 40.0% |
| !! | AGCAAGGATAATGCTGTTTC+CGG | - | chr8.3:68476472-68476491 | MS.gene050992:CDS | 40.0% |
| !! | CTTTTTCCCTTGCCATTTGT+CGG | - | chr8.3:68478798-68478817 | MS.gene050992:intron | 40.0% |
| !! | GCATTGACTACTTTGCTCTA+AGG | - | chr8.3:68478696-68478715 | MS.gene050992:intron | 40.0% |
| !!! | AGTGCACCCATTGTTTTTAC+CGG | + | chr8.3:68477669-68477688 | None:intergenic | 40.0% |
| !!! | CCATTGTTTTTACCGGCAAT+TGG | + | chr8.3:68477662-68477681 | None:intergenic | 40.0% |
| !!! | TTGTTTTTACCGGCAATTGG+AGG | + | chr8.3:68477659-68477678 | None:intergenic | 40.0% |
| AACACTATAACGCCATGGGA+CGG | + | chr8.3:68475864-68475883 | None:intergenic | 45.0% | |
| AACCAGACATGCATACAGAG+AGG | + | chr8.3:68476970-68476989 | None:intergenic | 45.0% | |
| AATGCAGAAAATAGCCCCCA+TGG | + | chr8.3:68478681-68478700 | None:intergenic | 45.0% | |
| AATTGGCAATTACCCTGCAG+TGG | + | chr8.3:68478524-68478543 | None:intergenic | 45.0% | |
| ACCAGACATGCATACAGAGA+GGG | + | chr8.3:68476969-68476988 | None:intergenic | 45.0% | |
| AGATTCTGATGATCCCATGG+GGG | - | chr8.3:68478664-68478683 | MS.gene050992:intron | 45.0% | |
| ATCAACACAAGCATCTTCGG+AGG | + | chr8.3:68478843-68478862 | None:intergenic | 45.0% | |
| ATGAAAAACCTGGATCGACG+AGG | - | chr8.3:68478596-68478615 | MS.gene050992:intron | 45.0% | |
| ATGCAGAAAATAGCCCCCAT+GGG | + | chr8.3:68478680-68478699 | None:intergenic | 45.0% | |
| ATTTGAGTCGATGCTACCGT+GGG | - | chr8.3:68479669-68479688 | MS.gene050992:CDS | 45.0% | |
| CCTTCCTCATAAGTAACCCA+CGG | + | chr8.3:68479688-68479707 | None:intergenic | 45.0% | |
| CGCGTTAAAAAGTTCTGCTC+AGG | - | chr8.3:68476402-68476421 | MS.gene050992:CDS | 45.0% | |
| CTGTCACAGATCTGCTTTAG+AGG | - | chr8.3:68478619-68478638 | MS.gene050992:intron | 45.0% | |
| CTTGCTCGTTCGAAAGAATG+TGG | - | chr8.3:68476269-68476288 | MS.gene050992:CDS | 45.0% | |
| GATGTTAACCAACCTGGTGA+CGG | - | chr8.3:68479715-68479734 | MS.gene050992:CDS | 45.0% | |
| GCGACTGGTGATTGATACAA+AGG | + | chr8.3:68477440-68477459 | None:intergenic | 45.0% | |
| GGCAAGAATGTTGAATAGCG+GGG | - | chr8.3:68477385-68477404 | MS.gene050992:intron | 45.0% | |
| GGGCAAGAATGTTGAATAGC+GGG | - | chr8.3:68477384-68477403 | MS.gene050992:intron | 45.0% | |
| GGTAAAACCGACAAATGGCA+AGG | + | chr8.3:68478808-68478827 | None:intergenic | 45.0% | |
| GTCCATGCACGATCTTTCAA+TGG | + | chr8.3:68478950-68478969 | None:intergenic | 45.0% | |
| GTCGGTGAGAGACGATAATA+AGG | - | chr8.3:68476369-68476388 | MS.gene050992:CDS | 45.0% | |
| TATTTGAGTCGATGCTACCG+TGG | - | chr8.3:68479668-68479687 | MS.gene050992:CDS | 45.0% | |
| TCACAAGTGCTTATGCCAGT+AGG | - | chr8.3:68475814-68475833 | MS.gene050992:CDS | 45.0% | |
| TGATTCTGAACCCGAAAACC+AGG | - | chr8.3:68475340-68475359 | MS.gene050992:CDS | 45.0% | |
| TGCTCGTTCGAAAGAATGTG+GGG | - | chr8.3:68476271-68476290 | MS.gene050992:CDS | 45.0% | |
| TGGGATTGCCGTTACTGAAT+CGG | + | chr8.3:68479515-68479534 | None:intergenic | 45.0% | |
| TGGGTTACTTATGAGGAAGG+TGG | - | chr8.3:68479688-68479707 | MS.gene050992:CDS | 45.0% | |
| TGTCTGGAGATACTATTGCG+AGG | - | chr8.3:68478456-68478475 | MS.gene050992:CDS | 45.0% | |
| TTGTCACTCCAGCAAACACT+TGG | - | chr8.3:68476809-68476828 | MS.gene050992:intron | 45.0% | |
| ! | GAGAGATGCACTGATGTCAA+CGG | - | chr8.3:68477588-68477607 | MS.gene050992:intron | 45.0% |
| ! | GTTGATTGTTGAAGGTGCAG+TGG | + | chr8.3:68475297-68475316 | None:intergenic | 45.0% |
| ! | GTTTGCTGGAGTGACAAGAA+CGG | + | chr8.3:68476806-68476825 | None:intergenic | 45.0% |
| ! | TAAGGTCTGAGGAGTATGCA+TGG | - | chr8.3:68478714-68478733 | MS.gene050992:intron | 45.0% |
| ! | TCGAAGGGGTTGATTGTTGA+AGG | + | chr8.3:68475305-68475324 | None:intergenic | 45.0% |
| !! | CTACTTTGCTCTAAGGTCTG+AGG | - | chr8.3:68478703-68478722 | MS.gene050992:intron | 45.0% |
| !! | TCACCAGGTTGGTTAACATC+AGG | + | chr8.3:68479715-68479734 | None:intergenic | 45.0% |
| !! | TGGTGCTGCAAAACAAGTCA+TGG | - | chr8.3:68479099-68479118 | MS.gene050992:intron | 45.0% |
| AGAGTGGGATTGGGAGACAT+AGG | - | chr8.3:68478070-68478089 | MS.gene050992:CDS | 50.0% | |
| ATTGCAGGGAGATGAGTCTG+CGG | - | chr8.3:68476339-68476358 | MS.gene050992:CDS | 50.0% | |
| CCAGACATGCATACAGAGAG+GGG | + | chr8.3:68476968-68476987 | None:intergenic | 50.0% | |
| CGATCTCTGATACTGGGAGT+AGG | + | chr8.3:68478312-68478331 | None:intergenic | 50.0% | |
| CTCTGATACTGGGAGTAGGA+TGG | + | chr8.3:68478308-68478327 | None:intergenic | 50.0% | |
| GAGTGGGATTGGGAGACATA+GGG | - | chr8.3:68478071-68478090 | MS.gene050992:CDS | 50.0% | |
| GGACCTGATGTTAACCAACC+TGG | - | chr8.3:68479709-68479728 | MS.gene050992:CDS | 50.0% | |
| GTGGGTGAACAACAGATGTC+TGG | - | chr8.3:68478440-68478459 | MS.gene050992:CDS | 50.0% | |
| TGAGTCTGCGGATGAAACGT+CGG | - | chr8.3:68476351-68476370 | MS.gene050992:CDS | 50.0% | |
| TTATGGGCATTCCAAGGGCA+GGG | - | chr8.3:68479554-68479573 | MS.gene050992:intron | 50.0% | |
| TTTATGGGCATTCCAAGGGC+AGG | - | chr8.3:68479553-68479572 | MS.gene050992:intron | 50.0% | |
| ! | CCGTGGGTTACTTATGAGGA+AGG | - | chr8.3:68479685-68479704 | MS.gene050992:CDS | 50.0% |
| ! | GCTACCGTGGGTTACTTATG+AGG | - | chr8.3:68479681-68479700 | MS.gene050992:CDS | 50.0% |
| AGCAAATCCAAGCCGTCCCA+TGG | - | chr8.3:68475849-68475868 | MS.gene050992:CDS | 55.0% | |
| CATGGGAGCCAAGTGTTTGC+TGG | + | chr8.3:68476820-68476839 | None:intergenic | 55.0% | |
| CCCCTCTCTGTATGCATGTC+TGG | - | chr8.3:68476965-68476984 | MS.gene050992:intron | 55.0% | |
| CGCATCTGCCTAGAACTGCT+TGG | + | chr8.3:68476748-68476767 | None:intergenic | 55.0% | |
| TATAACGCCATGGGACGGCT+TGG | + | chr8.3:68475859-68475878 | None:intergenic | 55.0% | |
| TATGGGCATTCCAAGGGCAG+GGG | - | chr8.3:68479555-68479574 | MS.gene050992:intron | 55.0% | |
| TTATCTTGCTCGCCGTCACC+AGG | + | chr8.3:68479730-68479749 | None:intergenic | 55.0% | |
| TTGCAACACCACGAGGAGCA+TGG | + | chr8.3:68479627-68479646 | None:intergenic | 55.0% | |
| ! | AGGGTGAAGATAGTGGCGAC+TGG | + | chr8.3:68477455-68477474 | None:intergenic | 55.0% |
| ! | GTCTGAGGAGTATGCATGGC+TGG | - | chr8.3:68478718-68478737 | MS.gene050992:intron | 55.0% |
| ! | TCGGTTTTACCTTGAGCGCG+CGG | - | chr8.3:68478817-68478836 | MS.gene050992:intron | 55.0% |
| !! | AGCAGTTCTAGGCAGATGCG+AGG | - | chr8.3:68476748-68476767 | MS.gene050992:intron | 55.0% |
| !! | CAGTTCTAGGCAGATGCGAG+GGG | - | chr8.3:68476750-68476769 | MS.gene050992:intron | 55.0% |
| !! | GCAGTTCTAGGCAGATGCGA+GGG | - | chr8.3:68476749-68476768 | MS.gene050992:intron | 55.0% |
| ACCCTGCAGTGGCGTGAATG+TGG | + | chr8.3:68478513-68478532 | None:intergenic | 60.0% | |
| CCCACATTCACGCCACTGCA+GGG | - | chr8.3:68478509-68478528 | MS.gene050992:CDS | 60.0% | |
| CCCTGCAGTGGCGTGAATGT+GGG | + | chr8.3:68478512-68478531 | None:intergenic | 60.0% | |
| GAGCATGGCCATTGCCTTGC+TGG | + | chr8.3:68479612-68479631 | None:intergenic | 60.0% | |
| TCCCACATTCACGCCACTGC+AGG | - | chr8.3:68478508-68478527 | MS.gene050992:CDS | 60.0% | |
| TGTGACAGCCTCGTCGATCC+AGG | + | chr8.3:68478607-68478626 | None:intergenic | 60.0% | |
| AAGGGCAGGGGAGGCTATGC+TGG | - | chr8.3:68479567-68479586 | MS.gene050992:intron | 65.0% | |
| AGCATAGCCTCCCCTGCCCT+TGG | + | chr8.3:68479568-68479587 | None:intergenic | 65.0% | |
| CTAGGCAGATGCGAGGGGTG+AGG | - | chr8.3:68476755-68476774 | MS.gene050992:intron | 65.0% | |
| CTTGCTCGCCGTCACCAGGT+TGG | + | chr8.3:68479726-68479745 | None:intergenic | 65.0% | |
| GGCAATGGCCATGCTCCTCG+TGG | - | chr8.3:68479616-68479635 | MS.gene050992:CDS | 65.0% | |
| GGGCATTCCAAGGGCAGGGG+AGG | - | chr8.3:68479558-68479577 | MS.gene050992:intron | 70.0% | |
| CTTCGGAGGCCGCGCGCTCA+AGG | + | chr8.3:68478829-68478848 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 68475182 | 68479756 | 68475182 | ID=MS.gene050992 |
| chr8.3 | mRNA | 68475182 | 68479756 | 68475182 | ID=MS.gene050992.t1;Parent=MS.gene050992 |
| chr8.3 | exon | 68479577 | 68479756 | 68479577 | ID=MS.gene050992.t1.exon1;Parent=MS.gene050992.t1 |
| chr8.3 | CDS | 68479577 | 68479756 | 68479577 | ID=cds.MS.gene050992.t1;Parent=MS.gene050992.t1 |
| chr8.3 | exon | 68478042 | 68478592 | 68478042 | ID=MS.gene050992.t1.exon2;Parent=MS.gene050992.t1 |
| chr8.3 | CDS | 68478042 | 68478592 | 68478042 | ID=cds.MS.gene050992.t1;Parent=MS.gene050992.t1 |
| chr8.3 | exon | 68475738 | 68476646 | 68475738 | ID=MS.gene050992.t1.exon3;Parent=MS.gene050992.t1 |
| chr8.3 | CDS | 68475738 | 68476646 | 68475738 | ID=cds.MS.gene050992.t1;Parent=MS.gene050992.t1 |
| chr8.3 | exon | 68475182 | 68475455 | 68475182 | ID=MS.gene050992.t1.exon4;Parent=MS.gene050992.t1 |
| chr8.3 | CDS | 68475182 | 68475455 | 68475182 | ID=cds.MS.gene050992.t1;Parent=MS.gene050992.t1 |
| Gene Sequence |
| Protein sequence |
