Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49777.t1 | XP_003630590.1 | 99.2 | 603 | 5 | 0 | 1 | 603 | 1 | 603 | 0.00E+00 | 1168.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49777.t1 | Q8BMA6 | 34.0 | 591 | 349 | 15 | 28 | 603 | 58 | 622 | 7.0e-78 | 293.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49777.t1 | G7LIT8 | 99.2 | 603 | 5 | 0 | 1 | 603 | 1 | 603 | 0.0e+00 | 1168.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049166 | MS.gene49777 | 0.810986 | 8.78E-51 | -1.69E-46 |
MS.gene049208 | MS.gene49777 | 0.807544 | 4.80E-50 | -1.69E-46 |
MS.gene049411 | MS.gene49777 | 0.816231 | 6.15E-52 | -1.69E-46 |
MS.gene049580 | MS.gene49777 | 0.825322 | 4.99E-54 | -1.69E-46 |
MS.gene049857 | MS.gene49777 | 0.803363 | 3.61E-49 | -1.69E-46 |
MS.gene049887 | MS.gene49777 | 0.848272 | 6.81E-60 | -1.69E-46 |
MS.gene050085 | MS.gene49777 | 0.806996 | 6.27E-50 | -1.69E-46 |
MS.gene050114 | MS.gene49777 | 0.832083 | 1.16E-55 | -1.69E-46 |
MS.gene050277 | MS.gene49777 | 0.834457 | 2.96E-56 | -1.69E-46 |
MS.gene050288 | MS.gene49777 | 0.809637 | 1.71E-50 | -1.69E-46 |
MS.gene050317 | MS.gene49777 | 0.821286 | 4.38E-53 | -1.69E-46 |
MS.gene050320 | MS.gene49777 | 0.841691 | 4.08E-58 | -1.69E-46 |
MS.gene050752 | MS.gene49777 | 0.856777 | 2.56E-62 | -1.69E-46 |
MS.gene050838 | MS.gene49777 | 0.927256 | 1.51E-91 | -1.69E-46 |
MS.gene050955 | MS.gene49777 | 0.825908 | 3.63E-54 | -1.69E-46 |
MS.gene050992 | MS.gene49777 | 0.819915 | 9.04E-53 | -1.69E-46 |
MS.gene051003 | MS.gene49777 | 0.86318 | 2.99E-64 | -1.69E-46 |
MS.gene051063 | MS.gene49777 | 0.854555 | 1.14E-61 | -1.69E-46 |
MS.gene051233 | MS.gene49777 | 0.812352 | 4.43E-51 | -1.69E-46 |
MS.gene051234 | MS.gene49777 | 0.854582 | 1.12E-61 | -1.69E-46 |
MS.gene051245 | MS.gene49777 | 0.819398 | 1.19E-52 | -1.69E-46 |
MS.gene051343 | MS.gene49777 | 0.825556 | 4.39E-54 | -1.69E-46 |
MS.gene051381 | MS.gene49777 | 0.806037 | 9.99E-50 | -1.69E-46 |
MS.gene051642 | MS.gene49777 | 0.842087 | 3.20E-58 | -1.69E-46 |
MS.gene051746 | MS.gene49777 | 0.886335 | 3.74E-72 | -1.69E-46 |
MS.gene051748 | MS.gene49777 | 0.889389 | 2.53E-73 | -1.69E-46 |
MS.gene051756 | MS.gene49777 | 0.860763 | 1.65E-63 | -1.69E-46 |
MS.gene051850 | MS.gene49777 | 0.881632 | 2.04E-70 | -1.69E-46 |
MS.gene051885 | MS.gene49777 | 0.836088 | 1.15E-56 | -1.69E-46 |
MS.gene051902 | MS.gene49777 | 0.811505 | 6.77E-51 | -1.69E-46 |
MS.gene051903 | MS.gene49777 | 0.886117 | 4.52E-72 | -1.69E-46 |
MS.gene052072 | MS.gene49777 | 0.802052 | 6.73E-49 | -1.69E-46 |
MS.gene052296 | MS.gene49777 | 0.843964 | 1.01E-58 | -1.69E-46 |
MS.gene052335 | MS.gene49777 | 0.830153 | 3.45E-55 | -1.69E-46 |
MS.gene052370 | MS.gene49777 | 0.820152 | 7.98E-53 | -1.69E-46 |
MS.gene052434 | MS.gene49777 | 0.806694 | 7.26E-50 | -1.69E-46 |
MS.gene052479 | MS.gene49777 | 0.826817 | 2.20E-54 | -1.69E-46 |
MS.gene052818 | MS.gene49777 | -0.816915 | 4.32E-52 | -1.69E-46 |
MS.gene052947 | MS.gene49777 | 0.87177 | 5.31E-67 | -1.69E-46 |
MS.gene053058 | MS.gene49777 | 0.83481 | 2.42E-56 | -1.69E-46 |
MS.gene053109 | MS.gene49777 | 0.861974 | 7.03E-64 | -1.69E-46 |
MS.gene053167 | MS.gene49777 | 0.820069 | 8.33E-53 | -1.69E-46 |
MS.gene053381 | MS.gene49777 | 0.815228 | 1.03E-51 | -1.69E-46 |
MS.gene053564 | MS.gene49777 | 0.819778 | 9.71E-53 | -1.69E-46 |
MS.gene053786 | MS.gene49777 | 0.815599 | 8.51E-52 | -1.69E-46 |
MS.gene05380 | MS.gene49777 | 0.815698 | 8.09E-52 | -1.69E-46 |
MS.gene053952 | MS.gene49777 | 0.87222 | 3.76E-67 | -1.69E-46 |
MS.gene054250 | MS.gene49777 | 0.824959 | 6.08E-54 | -1.69E-46 |
MS.gene054403 | MS.gene49777 | 0.85473 | 1.01E-61 | -1.69E-46 |
MS.gene05469 | MS.gene49777 | 0.811495 | 6.80E-51 | -1.69E-46 |
MS.gene055174 | MS.gene49777 | 0.804503 | 2.09E-49 | -1.69E-46 |
MS.gene055311 | MS.gene49777 | 0.815239 | 1.02E-51 | -1.69E-46 |
MS.gene055314 | MS.gene49777 | 0.808476 | 3.04E-50 | -1.69E-46 |
MS.gene055424 | MS.gene49777 | 0.861756 | 8.20E-64 | -1.69E-46 |
MS.gene055780 | MS.gene49777 | 0.810856 | 9.36E-51 | -1.69E-46 |
MS.gene056043 | MS.gene49777 | -0.815037 | 1.13E-51 | -1.69E-46 |
MS.gene056075 | MS.gene49777 | 0.862173 | 6.11E-64 | -1.69E-46 |
MS.gene056181 | MS.gene49777 | 0.818438 | 1.96E-52 | -1.69E-46 |
MS.gene056432 | MS.gene49777 | 0.822423 | 2.39E-53 | -1.69E-46 |
MS.gene056580 | MS.gene49777 | 0.818398 | 2.00E-52 | -1.69E-46 |
MS.gene056631 | MS.gene49777 | 0.829309 | 5.53E-55 | -1.69E-46 |
MS.gene056752 | MS.gene49777 | 0.84004 | 1.10E-57 | -1.69E-46 |
MS.gene056764 | MS.gene49777 | 0.809953 | 1.47E-50 | -1.69E-46 |
MS.gene056787 | MS.gene49777 | 0.81872 | 1.69E-52 | -1.69E-46 |
MS.gene056986 | MS.gene49777 | 0.805628 | 1.22E-49 | -1.69E-46 |
MS.gene056992 | MS.gene49777 | 0.817456 | 3.27E-52 | -1.69E-46 |
MS.gene057057 | MS.gene49777 | 0.834069 | 3.71E-56 | -1.69E-46 |
MS.gene057094 | MS.gene49777 | 0.899611 | 1.67E-77 | -1.69E-46 |
MS.gene057234 | MS.gene49777 | 0.870534 | 1.36E-66 | -1.69E-46 |
MS.gene057452 | MS.gene49777 | -0.834267 | 3.31E-56 | -1.69E-46 |
MS.gene05769 | MS.gene49777 | 0.807899 | 4.03E-50 | -1.69E-46 |
MS.gene057705 | MS.gene49777 | 0.810034 | 1.41E-50 | -1.69E-46 |
MS.gene05781 | MS.gene49777 | 0.838902 | 2.18E-57 | -1.69E-46 |
MS.gene057999 | MS.gene49777 | 0.83717 | 6.09E-57 | -1.69E-46 |
MS.gene058054 | MS.gene49777 | 0.83646 | 9.24E-57 | -1.69E-46 |
MS.gene058055 | MS.gene49777 | 0.847791 | 9.25E-60 | -1.69E-46 |
MS.gene058074 | MS.gene49777 | 0.847965 | 8.28E-60 | -1.69E-46 |
MS.gene058238 | MS.gene49777 | 0.829348 | 5.41E-55 | -1.69E-46 |
MS.gene058639 | MS.gene49777 | 0.803273 | 3.77E-49 | -1.69E-46 |
MS.gene058646 | MS.gene49777 | 0.816176 | 6.33E-52 | -1.69E-46 |
MS.gene058654 | MS.gene49777 | 0.849165 | 3.85E-60 | -1.69E-46 |
MS.gene058758 | MS.gene49777 | 0.802969 | 4.36E-49 | -1.69E-46 |
MS.gene05880 | MS.gene49777 | 0.832148 | 1.11E-55 | -1.69E-46 |
MS.gene058852 | MS.gene49777 | 0.826222 | 3.05E-54 | -1.69E-46 |
MS.gene058906 | MS.gene49777 | 0.832647 | 8.39E-56 | -1.69E-46 |
MS.gene059146 | MS.gene49777 | 0.813721 | 2.22E-51 | -1.69E-46 |
MS.gene059171 | MS.gene49777 | 0.870873 | 1.05E-66 | -1.69E-46 |
MS.gene059227 | MS.gene49777 | 0.849058 | 4.13E-60 | -1.69E-46 |
MS.gene059726 | MS.gene49777 | 0.812481 | 4.15E-51 | -1.69E-46 |
MS.gene06001 | MS.gene49777 | 0.879648 | 1.05E-69 | -1.69E-46 |
MS.gene06011 | MS.gene49777 | 0.85865 | 7.12E-63 | -1.69E-46 |
MS.gene060463 | MS.gene49777 | 0.818912 | 1.53E-52 | -1.69E-46 |
MS.gene060465 | MS.gene49777 | 0.82537 | 4.86E-54 | -1.69E-46 |
MS.gene060563 | MS.gene49777 | 0.804094 | 2.55E-49 | -1.69E-46 |
MS.gene060763 | MS.gene49777 | 0.849306 | 3.52E-60 | -1.69E-46 |
MS.gene060869 | MS.gene49777 | 0.809137 | 2.20E-50 | -1.69E-46 |
MS.gene061006 | MS.gene49777 | 0.811722 | 6.07E-51 | -1.69E-46 |
MS.gene061100 | MS.gene49777 | 0.810762 | 9.81E-51 | -1.69E-46 |
MS.gene061145 | MS.gene49777 | 0.828606 | 8.19E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49777.t1 | MTR_8g100110 | 99.171 | 603 | 5 | 0 | 1 | 603 | 1 | 603 | 0.0 | 1238 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49777.t1 | AT5G61970 | 74.917 | 602 | 144 | 3 | 1 | 599 | 1 | 598 | 0.0 | 950 |
Find 142 sgRNAs with CRISPR-Local
Find 455 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAACCAGTGATTGAGAATT+TGG | 0.115111 | 4.4:+7164201 | None:intergenic |
AGCTAACTTCTTCTGGCTTT+TGG | 0.191919 | 4.4:+7159388 | None:intergenic |
GGCTTTATAAGCAGAATATT+TGG | 0.214752 | 4.4:-7157505 | MS.gene49777:CDS |
CCTCTAGTTTAGCTTTAAAA+AGG | 0.275792 | 4.4:+7161433 | None:intergenic |
CAAAATGGCAACCCTTGTTT+TGG | 0.275936 | 4.4:+7161166 | None:intergenic |
TGATCAGAATTGGTTGATTT+CGG | 0.285982 | 4.4:+7164232 | None:intergenic |
TCAGCAAAGCTAACTTCTTC+TGG | 0.288214 | 4.4:+7159381 | None:intergenic |
TCTTCATGTGATTCTCTATT+CGG | 0.294404 | 4.4:-7162641 | MS.gene49777:CDS |
CTATCTGATTTAGTCAGTTC+TGG | 0.303730 | 4.4:-7159417 | MS.gene49777:CDS |
AGATACTGCCTTCACAAAAT+TGG | 0.305322 | 4.4:-7161519 | MS.gene49777:CDS |
GGCAGATTCTAGGACATCTT+TGG | 0.324881 | 4.4:-7162479 | MS.gene49777:CDS |
TACGAGGAGTTAGGGAAATA+TGG | 0.327193 | 4.4:-7161600 | MS.gene49777:CDS |
CTTCCATGACAGAATTTCAT+TGG | 0.334299 | 4.4:-7161217 | MS.gene49777:CDS |
GTGCGGTCAAGGCAGATTCT+AGG | 0.336790 | 4.4:-7162489 | MS.gene49777:CDS |
GTTAGGGAAATATGGAGATT+TGG | 0.338508 | 4.4:-7161592 | MS.gene49777:CDS |
CGGGCAATTGCCTGGAAAGC+TGG | 0.340905 | 4.4:+7157616 | None:intergenic |
GGATATCTTTCTCCAGCTCC+TGG | 0.341220 | 4.4:+7160002 | None:intergenic |
ACTACTAAACATTGGCGATA+TGG | 0.346999 | 4.4:-7161472 | MS.gene49777:CDS |
CATTTGATATTGGAAATCTA+TGG | 0.352525 | 4.4:+7161189 | None:intergenic |
AGGCTGTATTCGGGCTGATT+TGG | 0.353297 | 4.4:-7159897 | MS.gene49777:intron |
AATTCCCAGATATTCAAAAT+AGG | 0.359611 | 4.4:-7157555 | MS.gene49777:CDS |
AAGATACCAACCTTTCAAAA+TGG | 0.363789 | 4.4:+7161151 | None:intergenic |
TATAAGCGAACAAGCTCTTC+AGG | 0.367288 | 4.4:+7159609 | None:intergenic |
ATGATGCTAGAGGCTGTATT+CGG | 0.368177 | 4.4:-7159907 | MS.gene49777:CDS |
AGGGCTGTATACGAGGAGTT+AGG | 0.371688 | 4.4:-7161609 | MS.gene49777:CDS |
GGAAAGCTTCAAATGTTAGA+TGG | 0.373121 | 4.4:-7158602 | MS.gene49777:CDS |
AAGGCTGTCAGTGCTGTCTT+AGG | 0.375481 | 4.4:-7159726 | MS.gene49777:CDS |
GGGAACAATCTGATCAGAAT+TGG | 0.378268 | 4.4:+7164222 | None:intergenic |
GTCCAGCACAATCGGGTTAC+GGG | 0.380969 | 4.4:+7157597 | None:intergenic |
TGAGATGCATTTGGTCCATT+TGG | 0.384327 | 4.4:+7162577 | None:intergenic |
GGGCAATTGCCTGGAAAGCT+GGG | 0.390320 | 4.4:+7157617 | None:intergenic |
AAACATCAAGTTTCTCCAAT+AGG | 0.391438 | 4.4:+7157698 | None:intergenic |
AGCTCCGGTCAATGATATAT+TGG | 0.393649 | 4.4:+7157888 | None:intergenic |
TACGCAAGGTCCAGCACAAT+CGG | 0.400545 | 4.4:+7157589 | None:intergenic |
TCAGTTGGAGAAATTCCTAT+TGG | 0.402440 | 4.4:-7157713 | MS.gene49777:intron |
ATTTATACAACCTCCTCAAT+CGG | 0.402621 | 4.4:+7163837 | None:intergenic |
CTTATATGATCTCTTGCTAC+AGG | 0.403111 | 4.4:-7159592 | MS.gene49777:intron |
GACTATGGTGAAAGAATTAG+AGG | 0.405813 | 4.4:-7158007 | MS.gene49777:CDS |
TGTTTGAGCAAGATCAGAAC+TGG | 0.406278 | 4.4:-7161895 | MS.gene49777:CDS |
CAACAAAAGGTTGCGCTCAA+TGG | 0.416938 | 4.4:+7159695 | None:intergenic |
AGAGTGTTCATGCAAAAGTT+TGG | 0.418884 | 4.4:-7159358 | MS.gene49777:CDS |
GCGAACAAGCTCTTCAGGTT+TGG | 0.420651 | 4.4:+7159614 | None:intergenic |
ATGACAGAATTTCATTGGCT+TGG | 0.420947 | 4.4:-7161212 | MS.gene49777:CDS |
GGTCCAGCACAATCGGGTTA+CGG | 0.428004 | 4.4:+7157596 | None:intergenic |
TAGATTCGTTGAGATGCATT+TGG | 0.428149 | 4.4:+7162568 | None:intergenic |
CAACAAACTCCCCTTCATAT+AGG | 0.430300 | 4.4:+7161916 | None:intergenic |
AAACCAGTGATTGAGAATTT+GGG | 0.431036 | 4.4:+7164202 | None:intergenic |
TCGGGTTACGGGCAATTGCC+TGG | 0.434213 | 4.4:+7157608 | None:intergenic |
AGTTGTATAGAACATGCATT+GGG | 0.445865 | 4.4:-7157958 | MS.gene49777:CDS |
AGAACATGCATTGGGGATCA+TGG | 0.454533 | 4.4:-7157950 | MS.gene49777:CDS |
GTTCCCAAATTCTCAATCAC+TGG | 0.456061 | 4.4:-7164205 | MS.gene49777:intron |
TGATGCTAGAGGCTGTATTC+GGG | 0.459700 | 4.4:-7159906 | MS.gene49777:CDS |
TGAAGGCAGTATCTGATACT+AGG | 0.459854 | 4.4:+7161528 | None:intergenic |
TCTATTCGGCGGAGAGAGCT+TGG | 0.459965 | 4.4:-7162627 | MS.gene49777:CDS |
AGTGACATTAGACTCAGTTA+AGG | 0.466330 | 4.4:+7163772 | None:intergenic |
ATCATTGACCGGAGCTGAGC+GGG | 0.467588 | 4.4:-7157881 | MS.gene49777:intron |
CCCGCTCACGACACAAAACT+TGG | 0.470661 | 4.4:+7161565 | None:intergenic |
AATGTTAGATGGCAATAGTA+AGG | 0.476979 | 4.4:-7158591 | MS.gene49777:intron |
TTGCAACCCTGACCAACAAA+AGG | 0.482338 | 4.4:+7159682 | None:intergenic |
CAGAGGCTTGTAGATTTGAC+TGG | 0.485146 | 4.4:+7161496 | None:intergenic |
GAAAGATATCCATGGTCCCT+TGG | 0.491522 | 4.4:-7159990 | MS.gene49777:CDS |
GAGAAAAGGCAGCTTCCAAA+TGG | 0.491978 | 4.4:-7162592 | MS.gene49777:CDS |
GGGCTGTATACGAGGAGTTA+GGG | 0.493311 | 4.4:-7161608 | MS.gene49777:CDS |
TCTCAACGAATCTATCTGAT+TGG | 0.494018 | 4.4:-7162559 | MS.gene49777:CDS |
TGCCCGTAACCCGATTGTGC+TGG | 0.494225 | 4.4:-7157599 | MS.gene49777:CDS |
AGTCTAATGTCACTGAAGTA+AGG | 0.494583 | 4.4:-7163763 | MS.gene49777:intron |
GGCTTACGAGTCCTATATGA+AGG | 0.496687 | 4.4:-7161927 | MS.gene49777:CDS |
AGTTTAGCTGAAGATGCCTT+AGG | 0.498692 | 4.4:-7158623 | MS.gene49777:CDS |
GGAGTCATGCCATGGAGAAA+AGG | 0.500377 | 4.4:-7162606 | MS.gene49777:CDS |
CAATATCAAATGCCAAAACA+AGG | 0.504437 | 4.4:-7161178 | MS.gene49777:CDS |
TCGTATACTTGCCACGACCG+TGG | 0.504552 | 4.4:+7163801 | None:intergenic |
TTGAGATCTTGCCTCAGCCA+TGG | 0.506412 | 4.4:+7161247 | None:intergenic |
TATTTCAGCGGACAAAAGAC+TGG | 0.510192 | 4.4:-7159960 | MS.gene49777:CDS |
ACTTTCTGCATTTCCTGCAG+TGG | 0.513474 | 4.4:+7159776 | None:intergenic |
CATACAGTGTGGCTGGAAAG+AGG | 0.514081 | 4.4:-7158679 | MS.gene49777:CDS |
ATTATGTACCCGCTCAGCTC+CGG | 0.514586 | 4.4:+7157873 | None:intergenic |
TGATTTGAATGGTCTTGATA+AGG | 0.515403 | 4.4:-7159745 | MS.gene49777:CDS |
TTGAAGTTTACCCACGGTCG+TGG | 0.516226 | 4.4:-7163812 | MS.gene49777:CDS |
TTTATACAACCTCCTCAATC+GGG | 0.522055 | 4.4:+7163838 | None:intergenic |
CGTATACTTGCCACGACCGT+GGG | 0.522528 | 4.4:+7163802 | None:intergenic |
GATATCTTTCTCCAGCTCCT+GGG | 0.522684 | 4.4:+7160003 | None:intergenic |
TAAAGCACTTCAAAAGTGCT+AGG | 0.524363 | 4.4:-7161862 | MS.gene49777:intron |
TGATGTTTATGAGTCTGCTG+TGG | 0.529265 | 4.4:-7157683 | MS.gene49777:CDS |
GTGTTTGTACCAGGCTGCCA+TGG | 0.530914 | 4.4:-7161264 | MS.gene49777:intron |
TAACATTTGAAGCTTTCCTA+AGG | 0.531683 | 4.4:+7158607 | None:intergenic |
GGTATTGTACAGCCCGATTG+AGG | 0.540160 | 4.4:-7163850 | MS.gene49777:CDS |
ATCTCCAATATATCATTGAC+CGG | 0.542724 | 4.4:-7157892 | MS.gene49777:CDS |
CTGATTTAGTCAGTTCTGGA+AGG | 0.544771 | 4.4:-7159413 | MS.gene49777:CDS |
TGATATATTGGAGATCCCTT+CGG | 0.546542 | 4.4:+7157900 | None:intergenic |
TGATTTAGTCAGTTCTGGAA+GGG | 0.550208 | 4.4:-7159412 | MS.gene49777:CDS |
GCAAAGTCATACAGTGTGGC+TGG | 0.551315 | 4.4:-7158686 | MS.gene49777:CDS |
GATGTTTATGAGTCTGCTGT+GGG | 0.553817 | 4.4:-7157682 | MS.gene49777:CDS |
TATTCAAAATAGGATGAAGA+AGG | 0.553984 | 4.4:-7157545 | MS.gene49777:CDS |
AGAGAATCAATCATCTGCCA+TGG | 0.554301 | 4.4:-7164266 | MS.gene49777:CDS |
ACGCAAGGTCCAGCACAATC+GGG | 0.554921 | 4.4:+7157590 | None:intergenic |
TTTGTGTCGTGAGCGGGTTG+AGG | 0.555876 | 4.4:-7161559 | MS.gene49777:CDS |
GTACCAGGCTGCCATGGCTG+AGG | 0.557385 | 4.4:-7161258 | MS.gene49777:intron |
GCAATTGCCTGGAAAGCTGG+GGG | 0.559921 | 4.4:+7157619 | None:intergenic |
GCCAATGTTTAGTAGTTCAG+AGG | 0.565196 | 4.4:+7161479 | None:intergenic |
AAGAAGGACAAAAGAGCAAA+GGG | 0.565383 | 4.4:-7157529 | MS.gene49777:CDS |
ATACAGTGTGGCTGGAAAGA+GGG | 0.567964 | 4.4:-7158678 | MS.gene49777:CDS |
GGCAATTGCCTGGAAAGCTG+GGG | 0.568944 | 4.4:+7157618 | None:intergenic |
CAGTTGTATAGAACATGCAT+TGG | 0.572812 | 4.4:-7157959 | MS.gene49777:CDS |
GTTCTATACAACTGTTAGAA+CGG | 0.575188 | 4.4:+7157968 | None:intergenic |
TGGGGATCATGGAGGAGAAG+AGG | 0.577029 | 4.4:-7157939 | MS.gene49777:CDS |
GAATACAGCCTCTAGCATCA+TGG | 0.586389 | 4.4:+7159909 | None:intergenic |
TCTGCATACCATGATGCTAG+AGG | 0.587070 | 4.4:-7159917 | MS.gene49777:CDS |
TAGGACATCTTTGGAAGCTG+AGG | 0.588289 | 4.4:-7162470 | MS.gene49777:intron |
TTTCGGATCATCGACTTCCA+TGG | 0.588879 | 4.4:+7164249 | None:intergenic |
GCAAGATCAGAACTGGGATG+TGG | 0.590766 | 4.4:-7161888 | MS.gene49777:CDS |
ATGCAGCATGGTTTGCGTCA+CGG | 0.594530 | 4.4:-7164028 | MS.gene49777:CDS |
GAGAGCTTGGAGTCATGCCA+TGG | 0.598852 | 4.4:-7162614 | MS.gene49777:CDS |
CTAAACATTGGCGATATGGA+AGG | 0.599650 | 4.4:-7161468 | MS.gene49777:CDS |
GCCTCTGAACTACTAAACAT+TGG | 0.599852 | 4.4:-7161480 | MS.gene49777:CDS |
GGTTGCGCAAGGCAGTAAAG+TGG | 0.604150 | 4.4:-7162534 | MS.gene49777:CDS |
AAGCCAATGAAATTCTGTCA+TGG | 0.604976 | 4.4:+7161214 | None:intergenic |
CTCAAGAGAATATCTCCGAA+GGG | 0.608613 | 4.4:-7157915 | MS.gene49777:CDS |
GAAGAAGGACAAAAGAGCAA+AGG | 0.610571 | 4.4:-7157530 | MS.gene49777:CDS |
ACTCAAGAGAATATCTCCGA+AGG | 0.611069 | 4.4:-7157916 | MS.gene49777:CDS |
TCATGTGATTCTCTATTCGG+CGG | 0.614718 | 4.4:-7162638 | MS.gene49777:CDS |
GCTTACGAGTCCTATATGAA+GGG | 0.614942 | 4.4:-7161926 | MS.gene49777:CDS |
ATTCGATAGTGTTATACGCA+AGG | 0.621387 | 4.4:+7157575 | None:intergenic |
AACGAATCTATCTGATTGGT+AGG | 0.622250 | 4.4:-7162555 | MS.gene49777:CDS |
AAATCTTTGAAGTTTACCCA+CGG | 0.622381 | 4.4:-7163818 | MS.gene49777:CDS |
ATTGTACAGCCCGATTGAGG+AGG | 0.626640 | 4.4:-7163847 | MS.gene49777:CDS |
TCTGATTGGTAGGTTGCGCA+AGG | 0.628782 | 4.4:-7162545 | MS.gene49777:CDS |
GTTGCGCAAGGCAGTAAAGT+GGG | 0.628797 | 4.4:-7162533 | MS.gene49777:CDS |
ACGGAGATTACACTCGCTAT+CGG | 0.630014 | 4.4:-7164009 | MS.gene49777:intron |
AAATCAGCACAAATGCAGCA+TGG | 0.634136 | 4.4:-7164040 | MS.gene49777:CDS |
ATTTAACAGGGCTGTATACG+AGG | 0.648075 | 4.4:-7161616 | MS.gene49777:intron |
AATATCAAATGCCAAAACAA+GGG | 0.652385 | 4.4:-7161177 | MS.gene49777:CDS |
AGTGTGAAAGATGATTTGAA+TGG | 0.655868 | 4.4:-7159756 | MS.gene49777:CDS |
CTTACGAGTCCTATATGAAG+GGG | 0.656319 | 4.4:-7161925 | MS.gene49777:CDS |
CTTGGCAGAAAATATTTCAG+CGG | 0.661052 | 4.4:-7159972 | MS.gene49777:CDS |
CAATTGCCTGGAAAGCTGGG+GGG | 0.661981 | 4.4:+7157620 | None:intergenic |
TATCATTGACCGGAGCTGAG+CGG | 0.688933 | 4.4:-7157882 | MS.gene49777:CDS |
ACATGCATTGGGGATCATGG+AGG | 0.704917 | 4.4:-7157947 | MS.gene49777:CDS |
GAGCTGGAGAAAGATATCCA+TGG | 0.711540 | 4.4:-7159998 | MS.gene49777:CDS |
GTTTGAGCAAGATCAGAACT+GGG | 0.716721 | 4.4:-7161894 | MS.gene49777:CDS |
AAGGACAAAAGAGCAAAGGG+TGG | 0.733205 | 4.4:-7157526 | MS.gene49777:CDS |
GTTGTATAGAACATGCATTG+GGG | 0.748586 | 4.4:-7157957 | MS.gene49777:CDS |
TGTTGCAAAGTCATACAGTG+TGG | 0.777758 | 4.4:-7158690 | MS.gene49777:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CTATTAAATTGAAAAAAAAA+AGG | - | chr4.4:7160665-7160684 | MS.gene49777:intron | 10.0% |
!! | TAAATATATGCTAAAAATAT+TGG | - | chr4.4:7160885-7160904 | MS.gene49777:intron | 10.0% |
!!! | ATTTTTAAAAAAAAGGAAAA+AGG | + | chr4.4:7159002-7159021 | None:intergenic | 10.0% |
!!! | GTAAAACATTTTTAAAAAAA+AGG | + | chr4.4:7159009-7159028 | None:intergenic | 10.0% |
!! | AAATCCAAAAAAGAAAAAAA+TGG | + | chr4.4:7161625-7161644 | None:intergenic | 15.0% |
!! | AAGTCAAATATTATAAATCA+AGG | + | chr4.4:7159955-7159974 | None:intergenic | 15.0% |
!! | AATCATATTCTAAATTTAGA+AGG | + | chr4.4:7163586-7163605 | None:intergenic | 15.0% |
!! | ATAGATTAAAATAGTAGAAA+AGG | + | chr4.4:7159762-7159781 | None:intergenic | 15.0% |
!! | TAACAAATATATTATGTGTA+TGG | + | chr4.4:7161138-7161157 | None:intergenic | 15.0% |
!! | TAGATTAAAATAGTAGAAAA+GGG | + | chr4.4:7159761-7159780 | None:intergenic | 15.0% |
!! | TTGATTTATAATATTTGACT+TGG | - | chr4.4:7159954-7159973 | MS.gene49777:CDS | 15.0% |
!!! | AAATAAAAAACTCTAAAGAT+GGG | + | chr4.4:7162678-7162697 | None:intergenic | 15.0% |
!!! | AAATAAACTTTTCATTTTTC+TGG | - | chr4.4:7159047-7159066 | MS.gene49777:intron | 15.0% |
!!! | ACATAATATATTTGTTAATG+TGG | - | chr4.4:7161141-7161160 | MS.gene49777:intron | 15.0% |
!!! | AGTTATTTTTTAAGATCAAA+TGG | - | chr4.4:7163214-7163233 | MS.gene49777:intron | 15.0% |
!!! | GATTTTTCAAATGATTTTTT+TGG | - | chr4.4:7163258-7163277 | MS.gene49777:intron | 15.0% |
!!! | TAAATAAAAAACTCTAAAGA+TGG | + | chr4.4:7162679-7162698 | None:intergenic | 15.0% |
!!! | TTTTACAGAAGTTAAAAATT+TGG | + | chr4.4:7162578-7162597 | None:intergenic | 15.0% |
!!! | TTTTCTACTATTTTAATCTA+TGG | - | chr4.4:7159761-7159780 | MS.gene49777:CDS | 15.0% |
!! | AAAAAAAGGAAAAAGGAAAA+AGG | + | chr4.4:7158995-7159014 | None:intergenic | 20.0% |
!! | AAAAAATATTACCAAAAGAG+AGG | + | chr4.4:7159461-7159480 | None:intergenic | 20.0% |
!! | AAATTCAATTTAACACCAAA+AGG | + | chr4.4:7161088-7161107 | None:intergenic | 20.0% |
!! | ACATAAAATAATAGTAACAG+AGG | + | chr4.4:7160931-7160950 | None:intergenic | 20.0% |
!! | AGAAGATTATAAGAAACAAA+GGG | + | chr4.4:7163569-7163588 | None:intergenic | 20.0% |
!! | CATAAAATAATAGTAACAGA+GGG | + | chr4.4:7160930-7160949 | None:intergenic | 20.0% |
!! | TAGAAGATTATAAGAAACAA+AGG | + | chr4.4:7163570-7163589 | None:intergenic | 20.0% |
!! | TATAACTTACTTGAAGAAAA+GGG | - | chr4.4:7160384-7160403 | MS.gene49777:intron | 20.0% |
!! | TATAGAATTCAAACGTTATA+CGG | + | chr4.4:7157865-7157884 | None:intergenic | 20.0% |
!! | TATATTATGTGTATGGATTT+AGG | + | chr4.4:7161131-7161150 | None:intergenic | 20.0% |
!! | TTAATCGTTAGTAAAAGAAA+CGG | + | chr4.4:7157630-7157649 | None:intergenic | 20.0% |
!! | TTACATTGTCAAGATTTAAT+TGG | - | chr4.4:7161408-7161427 | MS.gene49777:intron | 20.0% |
!!! | AAAAAAATGTTAGTTTCCTT+TGG | + | chr4.4:7161341-7161360 | None:intergenic | 20.0% |
!!! | AAAAAATTGTTAGTTTCCTT+TGG | + | chr4.4:7161203-7161222 | None:intergenic | 20.0% |
!!! | AACTTCATCTTTTTTAAGTT+TGG | + | chr4.4:7160702-7160721 | None:intergenic | 20.0% |
!!! | ACTACCATTTTTTTCTTTTT+TGG | - | chr4.4:7161618-7161637 | MS.gene49777:intron | 20.0% |
!!! | ATTTCTTTTCCTTTTCAATT+TGG | - | chr4.4:7163743-7163762 | MS.gene49777:intron | 20.0% |
!!! | GAATAGAAAAAAAAGTTGAT+TGG | - | chr4.4:7159716-7159735 | MS.gene49777:CDS | 20.0% |
!!! | TTCATTACAACTTCTTTTAA+AGG | + | chr4.4:7159652-7159671 | None:intergenic | 20.0% |
!!! | TTTTAACAGATGATGATTAT+AGG | - | chr4.4:7162703-7162722 | MS.gene49777:intron | 20.0% |
! | AAATTGTTAGTTAACTCATG+TGG | - | chr4.4:7161168-7161187 | MS.gene49777:CDS | 25.0% |
! | AACGTTTGAATTCTATAGAT+TGG | - | chr4.4:7157868-7157887 | MS.gene49777:intron | 25.0% |
! | AATATCAAATGCCAAAACAA+GGG | - | chr4.4:7160598-7160617 | MS.gene49777:intron | 25.0% |
! | AATGGAAAAACATCTAAAAG+TGG | + | chr4.4:7158884-7158903 | None:intergenic | 25.0% |
! | AATTCCCAGATATTCAAAAT+AGG | - | chr4.4:7164220-7164239 | MS.gene49777:CDS | 25.0% |
! | ACAAATTATCATTCCATTTG+AGG | + | chr4.4:7162305-7162324 | None:intergenic | 25.0% |
! | AGGAAGCAAATAAATTAAGA+AGG | + | chr4.4:7162502-7162521 | None:intergenic | 25.0% |
! | ATCAATGACATTTCAAAAGA+CGG | + | chr4.4:7157837-7157856 | None:intergenic | 25.0% |
! | ATTATAAGAAACAAAGGGAA+GGG | + | chr4.4:7163564-7163583 | None:intergenic | 25.0% |
! | ATTCATGAATCACAAACATA+AGG | + | chr4.4:7161595-7161614 | None:intergenic | 25.0% |
! | CATTTGAAAAATCAACAAAC+AGG | + | chr4.4:7163251-7163270 | None:intergenic | 25.0% |
! | CATTTGATATTGGAAATCTA+TGG | + | chr4.4:7160589-7160608 | None:intergenic | 25.0% |
! | CCATTTGATGTAAATAACAA+TGG | + | chr4.4:7159379-7159398 | None:intergenic | 25.0% |
! | GAAGGAGATCATAATATAAA+AGG | + | chr4.4:7163413-7163432 | None:intergenic | 25.0% |
! | GGAAGCAAATAAATTAAGAA+GGG | + | chr4.4:7162501-7162520 | None:intergenic | 25.0% |
! | GTATAACTTACTTGAAGAAA+AGG | - | chr4.4:7160383-7160402 | MS.gene49777:intron | 25.0% |
! | TAAATGATGATTTCGTATCA+AGG | + | chr4.4:7158957-7158976 | None:intergenic | 25.0% |
! | TATTCAAAATAGGATGAAGA+AGG | - | chr4.4:7164230-7164249 | MS.gene49777:CDS | 25.0% |
! | TTAATCAGTATTGCAACAAA+AGG | - | chr4.4:7159336-7159355 | MS.gene49777:intron | 25.0% |
! | TTAATGCTTAGAGTTATTGT+TGG | - | chr4.4:7159545-7159564 | MS.gene49777:intron | 25.0% |
! | TTACACAATAAACAAGTGTT+TGG | + | chr4.4:7160069-7160088 | None:intergenic | 25.0% |
! | TTCATGAATCACAAACATAA+GGG | + | chr4.4:7161594-7161613 | None:intergenic | 25.0% |
! | TTGATACGAAATCATCATTT+AGG | - | chr4.4:7158956-7158975 | MS.gene49777:intron | 25.0% |
!! | TTTATTCTTCTGTGCATTTT+AGG | - | chr4.4:7161976-7161995 | MS.gene49777:intron | 25.0% |
!!! | AAGAATGATTTGGTTTCAAT+TGG | - | chr4.4:7158136-7158155 | MS.gene49777:intron | 25.0% |
!!! | ATAATATTTGACTTGGAGAA+AGG | - | chr4.4:7159961-7159980 | MS.gene49777:CDS | 25.0% |
!!! | CCATTGTTATTTACATCAAA+TGG | - | chr4.4:7159376-7159395 | MS.gene49777:CDS | 25.0% |
!!! | TAATATTTGACTTGGAGAAA+GGG | - | chr4.4:7159962-7159981 | MS.gene49777:CDS | 25.0% |
!!! | TCATCCTATTTTGAATATCT+GGG | + | chr4.4:7164227-7164246 | None:intergenic | 25.0% |
!!! | TGGAATTTACTTTTGAATTC+AGG | - | chr4.4:7159109-7159128 | MS.gene49777:intron | 25.0% |
!!! | TTCAAATGATTTTTTTGGTC+TGG | - | chr4.4:7163263-7163282 | MS.gene49777:intron | 25.0% |
!!! | TTCATCCTATTTTGAATATC+TGG | + | chr4.4:7164228-7164247 | None:intergenic | 25.0% |
!!! | TTTGGAATCTTTTTCTTTCT+GGG | - | chr4.4:7160799-7160818 | MS.gene49777:intron | 25.0% |
!!! | TTTGTTTTCACAATTTTGTG+CGG | - | chr4.4:7159269-7159288 | MS.gene49777:intron | 25.0% |
!!! | TTTTGGAATCTTTTTCTTTC+TGG | - | chr4.4:7160798-7160817 | MS.gene49777:intron | 25.0% |
AAAAAAAAACAGCAGCTTTG+AGG | + | chr4.4:7162267-7162286 | None:intergenic | 30.0% | |
AAACATCAAGTTTCTCCAAT+AGG | + | chr4.4:7164080-7164099 | None:intergenic | 30.0% | |
AAACCAGTGATTGAGAATTT+GGG | + | chr4.4:7157576-7157595 | None:intergenic | 30.0% | |
AAATATTGGTGTGAAGAACA+TGG | - | chr4.4:7160899-7160918 | MS.gene49777:intron | 30.0% | |
AACAAATTCAAGAGTTAGGT+TGG | + | chr4.4:7161366-7161385 | None:intergenic | 30.0% | |
AACCATGATCCTATTTAACA+GGG | - | chr4.4:7160147-7160166 | MS.gene49777:intron | 30.0% | |
AAGATACCAACCTTTCAAAA+TGG | + | chr4.4:7160627-7160646 | None:intergenic | 30.0% | |
AATCAGTGAACAAATGAAAG+AGG | + | chr4.4:7159824-7159843 | None:intergenic | 30.0% | |
AATGTTAGATGGCAATAGTA+AGG | - | chr4.4:7163184-7163203 | MS.gene49777:intron | 30.0% | |
ACATGCTATGTAGTATCAAA+AGG | - | chr4.4:7161520-7161539 | MS.gene49777:CDS | 30.0% | |
ACCTAAAGATGGTAATCTAT+CGG | - | chr4.4:7163447-7163466 | MS.gene49777:intron | 30.0% | |
ACTTGAAGAAAAGGGAAAAT+GGG | - | chr4.4:7160392-7160411 | MS.gene49777:intron | 30.0% | |
AGAAAGGGAAAAAAATATGC+AGG | - | chr4.4:7159977-7159996 | MS.gene49777:CDS | 30.0% | |
AGCAAAAGCTGAAAATAACA+AGG | + | chr4.4:7162550-7162569 | None:intergenic | 30.0% | |
AGTGTGAAAGATGATTTGAA+TGG | - | chr4.4:7162019-7162038 | MS.gene49777:intron | 30.0% | |
AGTTGTATAGAACATGCATT+GGG | - | chr4.4:7163817-7163836 | MS.gene49777:CDS | 30.0% | |
ATCTACTTATTTGTCAGTAG+TGG | + | chr4.4:7158660-7158679 | None:intergenic | 30.0% | |
ATCTCCAATATATCATTGAC+CGG | - | chr4.4:7163883-7163902 | MS.gene49777:intron | 30.0% | |
ATGCTATGTAGTATCAAAAG+GGG | - | chr4.4:7161522-7161541 | MS.gene49777:CDS | 30.0% | |
ATTTATACAACCTCCTCAAT+CGG | + | chr4.4:7157941-7157960 | None:intergenic | 30.0% | |
ATTTGAGGAGCTAATGTTAA+AGG | + | chr4.4:7162290-7162309 | None:intergenic | 30.0% | |
CAATATCAAATGCCAAAACA+AGG | - | chr4.4:7160597-7160616 | MS.gene49777:intron | 30.0% | |
CATAGCATGTTTGAATTGTT+AGG | + | chr4.4:7161510-7161529 | None:intergenic | 30.0% | |
CATGCTATGTAGTATCAAAA+GGG | - | chr4.4:7161521-7161540 | MS.gene49777:CDS | 30.0% | |
GAGTGTTAGAAAGAATGATT+TGG | - | chr4.4:7158126-7158145 | MS.gene49777:intron | 30.0% | |
GATTATAAGAAACAAAGGGA+AGG | + | chr4.4:7163565-7163584 | None:intergenic | 30.0% | |
GCAAAAGCTGAAAATAACAA+GGG | + | chr4.4:7162549-7162568 | None:intergenic | 30.0% | |
GTAGATTGTTAAGATGAGTT+GGG | - | chr4.4:7158408-7158427 | MS.gene49777:intron | 30.0% | |
GTTCTATACAACTGTTAGAA+CGG | + | chr4.4:7163810-7163829 | None:intergenic | 30.0% | |
GTTTCAATGTTATGGAAGTT+AGG | + | chr4.4:7163325-7163344 | None:intergenic | 30.0% | |
TAACAAGCGTTTCAATGTTA+TGG | + | chr4.4:7163333-7163352 | None:intergenic | 30.0% | |
TAACCATGATCCTATTTAAC+AGG | - | chr4.4:7160146-7160165 | MS.gene49777:intron | 30.0% | |
TAATTCGATAGCAATGAAGA+TGG | + | chr4.4:7158175-7158194 | None:intergenic | 30.0% | |
TACTTGAAGAAAAGGGAAAA+TGG | - | chr4.4:7160391-7160410 | MS.gene49777:intron | 30.0% | |
TATACTTGGCCTAATCTATA+GGG | + | chr4.4:7158632-7158651 | None:intergenic | 30.0% | |
TCTACTTATTTGTCAGTAGT+GGG | + | chr4.4:7158659-7158678 | None:intergenic | 30.0% | |
TCTTATTGGATGAATAGAGT+CGG | - | chr4.4:7162792-7162811 | MS.gene49777:intron | 30.0% | |
TCTTCATGTGATTCTCTATT+CGG | - | chr4.4:7159134-7159153 | MS.gene49777:intron | 30.0% | |
TGAAATGTACGTGATAGAAA+TGG | + | chr4.4:7158902-7158921 | None:intergenic | 30.0% | |
TGAACTTTCCTAAATGCTAT+CGG | + | chr4.4:7162615-7162634 | None:intergenic | 30.0% | |
TGTAGATTGTTAAGATGAGT+TGG | - | chr4.4:7158407-7158426 | MS.gene49777:intron | 30.0% | |
TTAACAATCTACACTCTACA+GGG | + | chr4.4:7158400-7158419 | None:intergenic | 30.0% | |
TTATACTTGGCCTAATCTAT+AGG | + | chr4.4:7158633-7158652 | None:intergenic | 30.0% | |
TTATCGCAAAAAGCAGTATT+AGG | + | chr4.4:7158760-7158779 | None:intergenic | 30.0% | |
TTGCAACAAATTCAAGAGTT+AGG | + | chr4.4:7161370-7161389 | None:intergenic | 30.0% | |
TTTAACATTAGCTCCTCAAA+TGG | - | chr4.4:7162289-7162308 | MS.gene49777:intron | 30.0% | |
TTTGTATACCGATAGCATTT+AGG | - | chr4.4:7162604-7162623 | MS.gene49777:CDS | 30.0% | |
! | AAATCATCATTTAGGCCTTT+TGG | - | chr4.4:7158964-7158983 | MS.gene49777:intron | 30.0% |
! | ACTTTTTACATTGACACTGT+AGG | - | chr4.4:7157901-7157920 | MS.gene49777:CDS | 30.0% |
! | AGCATGTATACCTTTAGTTT+AGG | + | chr4.4:7163040-7163059 | None:intergenic | 30.0% |
! | ATGTATACCTTTAGTTTAGG+TGG | + | chr4.4:7163037-7163056 | None:intergenic | 30.0% |
! | GAAATCAATTGTTGTTGACT+GGG | - | chr4.4:7163371-7163390 | MS.gene49777:intron | 30.0% |
! | GGCTTTATAAGCAGAATATT+TGG | - | chr4.4:7164270-7164289 | MS.gene49777:CDS | 30.0% |
! | GTAAAATGGCATTTCTGTTT+TGG | - | chr4.4:7160781-7160800 | MS.gene49777:intron | 30.0% |
! | TAACATTTGAAGCTTTCCTA+AGG | + | chr4.4:7163171-7163190 | None:intergenic | 30.0% |
! | TAGGATGTTTGTTGGAAAAT+GGG | + | chr4.4:7158741-7158760 | None:intergenic | 30.0% |
! | TGAAATCAATTGTTGTTGAC+TGG | - | chr4.4:7163370-7163389 | MS.gene49777:intron | 30.0% |
! | TGATCAGAATTGGTTGATTT+CGG | + | chr4.4:7157546-7157565 | None:intergenic | 30.0% |
! | TGATTTGAATGGTCTTGATA+AGG | - | chr4.4:7162030-7162049 | MS.gene49777:intron | 30.0% |
! | TTAGGATGTTTGTTGGAAAA+TGG | + | chr4.4:7158742-7158761 | None:intergenic | 30.0% |
! | TTTAAAGCTAAACTAGAGGT+TGG | - | chr4.4:7160346-7160365 | MS.gene49777:intron | 30.0% |
! | TTTTGTTAAAAGTCCCACAT+TGG | - | chr4.4:7158559-7158578 | MS.gene49777:intron | 30.0% |
!! | AAATCTTTGAAGTTTACCCA+CGG | - | chr4.4:7157957-7157976 | MS.gene49777:CDS | 30.0% |
!! | CCTCTAGTTTAGCTTTAAAA+AGG | + | chr4.4:7160345-7160364 | None:intergenic | 30.0% |
!!! | CCTTTTTAAAGCTAAACTAG+AGG | - | chr4.4:7160342-7160361 | MS.gene49777:intron | 30.0% |
!!! | CTTGTTTTGGCATTTGATAT+TGG | + | chr4.4:7160599-7160618 | None:intergenic | 30.0% |
!!! | TCATTTGTTCACTGATTTTC+AGG | - | chr4.4:7159827-7159846 | MS.gene49777:intron | 30.0% |
!!! | TCCTATGCTATTTTTTTGAG+CGG | - | chr4.4:7163935-7163954 | MS.gene49777:intron | 30.0% |
!!! | TTGTTATTTTCAGCTTTTGC+TGG | - | chr4.4:7162549-7162568 | MS.gene49777:CDS | 30.0% |
!!! | TTTATTTTGCTGATGAAGCA+TGG | - | chr4.4:7159793-7159812 | MS.gene49777:intron | 30.0% |
AACGAATCTATCTGATTGGT+AGG | - | chr4.4:7159220-7159239 | MS.gene49777:intron | 35.0% | |
AAGAAGGACAAAAGAGCAAA+GGG | - | chr4.4:7164246-7164265 | MS.gene49777:CDS | 35.0% | |
AAGCCAATGAAATTCTGTCA+TGG | + | chr4.4:7160564-7160583 | None:intergenic | 35.0% | |
AAGTAAAATCCACTAGTCCA+GGG | + | chr4.4:7161029-7161048 | None:intergenic | 35.0% | |
ACAAATATTTCTCTGATCCC+TGG | - | chr4.4:7161009-7161028 | MS.gene49777:intron | 35.0% | |
ACCTAAGAAAATGGAATCCA+TGG | - | chr4.4:7158361-7158380 | MS.gene49777:intron | 35.0% | |
ACTACTAAACATTGGCGATA+TGG | - | chr4.4:7160303-7160322 | MS.gene49777:intron | 35.0% | |
AGATACTGCCTTCACAAAAT+TGG | - | chr4.4:7160256-7160275 | MS.gene49777:intron | 35.0% | |
AGCAGTATTAGGATGTTTGT+TGG | + | chr4.4:7158749-7158768 | None:intergenic | 35.0% | |
AGCTAAATAGTAGTAGGCTA+GGG | - | chr4.4:7158228-7158247 | MS.gene49777:intron | 35.0% | |
AGGAAAAAGGACAAACCAAA+AGG | + | chr4.4:7158982-7159001 | None:intergenic | 35.0% | |
AGTATAACCACATCTGTTTC+TGG | - | chr4.4:7162994-7163013 | MS.gene49777:intron | 35.0% | |
AGTCTAATGTCACTGAAGTA+AGG | - | chr4.4:7158012-7158031 | MS.gene49777:intron | 35.0% | |
AGTGACATTAGACTCAGTTA+AGG | + | chr4.4:7158006-7158025 | None:intergenic | 35.0% | |
ATATTACCAAAAGAGAGGAG+TGG | + | chr4.4:7159456-7159475 | None:intergenic | 35.0% | |
ATCATGGTTAAAAACTCGAC+AGG | + | chr4.4:7160136-7160155 | None:intergenic | 35.0% | |
ATGATGATTTCGTATCAAGG+CGG | + | chr4.4:7158954-7158973 | None:intergenic | 35.0% | |
ATGTGTCCTCTTAAGACTTA+CGG | - | chr4.4:7158198-7158217 | MS.gene49777:intron | 35.0% | |
ATTACCATCTTTAGGTCTAC+AGG | + | chr4.4:7163443-7163462 | None:intergenic | 35.0% | |
ATTCGATAGTGTTATACGCA+AGG | + | chr4.4:7164203-7164222 | None:intergenic | 35.0% | |
CAAACCAGTGATTGAGAATT+TGG | + | chr4.4:7157577-7157596 | None:intergenic | 35.0% | |
CAATGTTATGGAAGTTAGGA+TGG | + | chr4.4:7163321-7163340 | None:intergenic | 35.0% | |
CAGTTGTATAGAACATGCAT+TGG | - | chr4.4:7163816-7163835 | MS.gene49777:CDS | 35.0% | |
CATAGTCTGCCAAATTGAAA+AGG | + | chr4.4:7163755-7163774 | None:intergenic | 35.0% | |
CATGTAATGCTCTGTATCAA+AGG | + | chr4.4:7159621-7159640 | None:intergenic | 35.0% | |
CCAATAAGAAATGACACACT+GGG | + | chr4.4:7162781-7162800 | None:intergenic | 35.0% | |
CCTAAAGATGGTAATCTATC+GGG | - | chr4.4:7163448-7163467 | MS.gene49777:intron | 35.0% | |
CCTAAGAAAATGGAATCCAT+GGG | - | chr4.4:7158362-7158381 | MS.gene49777:intron | 35.0% | |
CTATCTGATTTAGTCAGTTC+TGG | - | chr4.4:7162358-7162377 | MS.gene49777:intron | 35.0% | |
CTTAACAATCTACACTCTAC+AGG | + | chr4.4:7158401-7158420 | None:intergenic | 35.0% | |
CTTATATGATCTCTTGCTAC+AGG | - | chr4.4:7162183-7162202 | MS.gene49777:intron | 35.0% | |
CTTATTGGATGAATAGAGTC+GGG | - | chr4.4:7162793-7162812 | MS.gene49777:intron | 35.0% | |
CTTCCATGACAGAATTTCAT+TGG | - | chr4.4:7160558-7160577 | MS.gene49777:intron | 35.0% | |
CTTGGCAGAAAATATTTCAG+CGG | - | chr4.4:7161803-7161822 | MS.gene49777:intron | 35.0% | |
GACTAGAGCTAAATAGTAGT+AGG | - | chr4.4:7158222-7158241 | MS.gene49777:intron | 35.0% | |
GACTATGGTGAAAGAATTAG+AGG | - | chr4.4:7163768-7163787 | MS.gene49777:CDS | 35.0% | |
GATAACTTAGTGTTTGTACC+AGG | - | chr4.4:7160502-7160521 | MS.gene49777:intron | 35.0% | |
GATGTTTCCACCTAAACTAA+AGG | - | chr4.4:7163027-7163046 | MS.gene49777:intron | 35.0% | |
GCAAGTTCACAAACAAAACA+TGG | + | chr4.4:7162216-7162235 | None:intergenic | 35.0% | |
GCAGAGAGAAGATAACTTTA+GGG | + | chr4.4:7158703-7158722 | None:intergenic | 35.0% | |
GGAAAGCTTCAAATGTTAGA+TGG | - | chr4.4:7163173-7163192 | MS.gene49777:intron | 35.0% | |
GTAATCCTATCTGTTTCAGT+TGG | - | chr4.4:7164047-7164066 | MS.gene49777:CDS | 35.0% | |
GTCGGGAATAAATGTTATAG+TGG | - | chr4.4:7162810-7162829 | MS.gene49777:intron | 35.0% | |
GTTAGGGAAATATGGAGATT+TGG | - | chr4.4:7160183-7160202 | MS.gene49777:intron | 35.0% | |
GTTGTATAGAACATGCATTG+GGG | - | chr4.4:7163818-7163837 | MS.gene49777:CDS | 35.0% | |
TAGATTCGTTGAGATGCATT+TGG | + | chr4.4:7159210-7159229 | None:intergenic | 35.0% | |
TAGCAACAAATTCAAGAGCT+AGG | + | chr4.4:7161230-7161249 | None:intergenic | 35.0% | |
TATCTACACATGCTTAACAG+TGG | - | chr4.4:7159083-7159102 | MS.gene49777:intron | 35.0% | |
TATTACCAAAAGAGAGGAGT+GGG | + | chr4.4:7159455-7159474 | None:intergenic | 35.0% | |
TATTATGATCTCCTTCAACC+AGG | - | chr4.4:7163417-7163436 | MS.gene49777:intron | 35.0% | |
TCACGGTAGAATTTATGGAA+AGG | - | chr4.4:7162750-7162769 | MS.gene49777:intron | 35.0% | |
TCAGTTGGAGAAATTCCTAT+TGG | - | chr4.4:7164062-7164081 | MS.gene49777:intron | 35.0% | |
TCATGGTTAAAAACTCGACA+GGG | + | chr4.4:7160135-7160154 | None:intergenic | 35.0% | |
TCCAATAAGAAATGACACAC+TGG | + | chr4.4:7162782-7162801 | None:intergenic | 35.0% | |
TCCATAAATTCTACCGTGAT+GGG | + | chr4.4:7162749-7162768 | None:intergenic | 35.0% | |
TCTAACACTCTTTCCTTCTT+CGG | + | chr4.4:7158116-7158135 | None:intergenic | 35.0% | |
TCTAAGAGTTCAAAGCTGAA+TGG | - | chr4.4:7158803-7158822 | MS.gene49777:intron | 35.0% | |
TCTCAACGAATCTATCTGAT+TGG | - | chr4.4:7159216-7159235 | MS.gene49777:intron | 35.0% | |
TGAAATTGTGTTACCGAAGA+AGG | - | chr4.4:7158100-7158119 | MS.gene49777:intron | 35.0% | |
TGATATATTGGAGATCCCTT+CGG | + | chr4.4:7163878-7163897 | None:intergenic | 35.0% | |
TGCTCTGTATCAGATTATAC+CGG | + | chr4.4:7159583-7159602 | None:intergenic | 35.0% | |
TGTATCAGATTATACCGGAA+AGG | + | chr4.4:7159578-7159597 | None:intergenic | 35.0% | |
TTAAAGTCCAGAAACAGATG+TGG | + | chr4.4:7163004-7163023 | None:intergenic | 35.0% | |
TTCCATAAATTCTACCGTGA+TGG | + | chr4.4:7162750-7162769 | None:intergenic | 35.0% | |
TTGATTTCACACTCAACTTC+AGG | + | chr4.4:7163359-7163378 | None:intergenic | 35.0% | |
TTTATACAACCTCCTCAATC+GGG | + | chr4.4:7157940-7157959 | None:intergenic | 35.0% | |
TTTCTCCAACTGAAACAGAT+AGG | + | chr4.4:7164055-7164074 | None:intergenic | 35.0% | |
! | AAGTTTTTCTCTCCTCTCAT+AGG | - | chr4.4:7162915-7162934 | MS.gene49777:intron | 35.0% |
! | AGAGAAGATAACTTTAGGGA+GGG | + | chr4.4:7158699-7158718 | None:intergenic | 35.0% |
! | AGAGTGTTCATGCAAAAGTT+TGG | - | chr4.4:7162417-7162436 | MS.gene49777:intron | 35.0% |
! | AGTTTTTCTCTCCTCTCATA+GGG | - | chr4.4:7162916-7162935 | MS.gene49777:intron | 35.0% |
! | ATGACAGAATTTCATTGGCT+TGG | - | chr4.4:7160563-7160582 | MS.gene49777:intron | 35.0% |
! | CTGAATAATTTTATCAGCCC+AGG | - | chr4.4:7161755-7161774 | MS.gene49777:intron | 35.0% |
! | CTTTTCAATTTGGCAGACTA+TGG | - | chr4.4:7163753-7163772 | MS.gene49777:intron | 35.0% |
! | GCTGAAATATTTTCTGCCAA+GGG | + | chr4.4:7161804-7161823 | None:intergenic | 35.0% |
! | TTGTTGGATTTGTTCCTTTC+CGG | - | chr4.4:7159561-7159580 | MS.gene49777:intron | 35.0% |
! | TTTGGTTTCAATTGGCTGTT+AGG | - | chr4.4:7158144-7158163 | MS.gene49777:intron | 35.0% |
! | TTTTACATTGACACTGTAGG+AGG | - | chr4.4:7157904-7157923 | MS.gene49777:CDS | 35.0% |
!! | AGTGGATTTTACTTCTGACT+TGG | - | chr4.4:7161035-7161054 | MS.gene49777:intron | 35.0% |
!! | GCTTTAAAAAGGTCTAATGC+AGG | + | chr4.4:7160334-7160353 | None:intergenic | 35.0% |
!! | TAAAGCACTTCAAAAGTGCT+AGG | - | chr4.4:7159913-7159932 | MS.gene49777:CDS | 35.0% |
!! | TAACACCAAAAGGAGCATTA+TGG | + | chr4.4:7161078-7161097 | None:intergenic | 35.0% |
!! | TGATTTAGTCAGTTCTGGAA+GGG | - | chr4.4:7162363-7162382 | MS.gene49777:intron | 35.0% |
!!! | AGAAATGCCATTTTACAGCA+TGG | + | chr4.4:7160777-7160796 | None:intergenic | 35.0% |
!!! | CCTATGCTATTTTTTTGAGC+GGG | - | chr4.4:7163936-7163955 | MS.gene49777:intron | 35.0% |
!!! | GAAATGCCATTTTACAGCAT+GGG | + | chr4.4:7160776-7160795 | None:intergenic | 35.0% |
AAAATGGAATCCATGGGAAG+CGG | - | chr4.4:7158368-7158387 | MS.gene49777:intron | 40.0% | |
AAATCAGCACAAATGCAGCA+TGG | - | chr4.4:7157735-7157754 | MS.gene49777:intron | 40.0% | |
AAGAGTTCAAAGCTGAATGG+TGG | - | chr4.4:7158806-7158825 | MS.gene49777:intron | 40.0% | |
AATCGTGGCACCTAAGAAAA+TGG | - | chr4.4:7158352-7158371 | MS.gene49777:intron | 40.0% | |
ACGTGTATGTAACCACCTAA+TGG | - | chr4.4:7160741-7160760 | MS.gene49777:intron | 40.0% | |
ACTCAAGAGAATATCTCCGA+AGG | - | chr4.4:7163859-7163878 | MS.gene49777:intron | 40.0% | |
AGAGAATCAATCATCTGCCA+TGG | - | chr4.4:7157509-7157528 | MS.gene49777:CDS | 40.0% | |
AGCATTATGGATGTCAACCT+AGG | + | chr4.4:7161065-7161084 | None:intergenic | 40.0% | |
AGCCCTGTTAAATAGGATCA+TGG | + | chr4.4:7160152-7160171 | None:intergenic | 40.0% | |
AGCTCCGGTCAATGATATAT+TGG | + | chr4.4:7163890-7163909 | None:intergenic | 40.0% | |
AGTATGTAAAGCTCCCATCA+CGG | - | chr4.4:7162733-7162752 | MS.gene49777:intron | 40.0% | |
AGTTTAGCTGAAGATGCCTT+AGG | - | chr4.4:7163152-7163171 | MS.gene49777:intron | 40.0% | |
ATCAAAAGGGGAATTGTTGC+TGG | - | chr4.4:7161534-7161553 | MS.gene49777:CDS | 40.0% | |
ATCTGCTGAACATAACTCGT+TGG | - | chr4.4:7160964-7160983 | MS.gene49777:intron | 40.0% | |
ATGATGCTAGAGGCTGTATT+CGG | - | chr4.4:7161868-7161887 | MS.gene49777:CDS | 40.0% | |
ATTGCAAAGCACACGTTTGT+GGG | + | chr4.4:7158262-7158281 | None:intergenic | 40.0% | |
ATTTAACAGGGCTGTATACG+AGG | - | chr4.4:7160159-7160178 | MS.gene49777:intron | 40.0% | |
CAACAAACTCCCCTTCATAT+AGG | + | chr4.4:7159862-7159881 | None:intergenic | 40.0% | |
CACATGCTTAACAGTGGAAT+TGG | - | chr4.4:7159089-7159108 | MS.gene49777:intron | 40.0% | |
CATGCTTATGACTTATGTGC+AGG | - | chr4.4:7163054-7163073 | MS.gene49777:intron | 40.0% | |
CCCGATAGATTACCATCTTT+AGG | + | chr4.4:7163451-7163470 | None:intergenic | 40.0% | |
CCCGCTCAAAAAAATAGCAT+AGG | + | chr4.4:7163939-7163958 | None:intergenic | 40.0% | |
CGTATACAGCCCTGTTAAAT+AGG | + | chr4.4:7160159-7160178 | None:intergenic | 40.0% | |
CTAAACATTGGCGATATGGA+AGG | - | chr4.4:7160307-7160326 | MS.gene49777:intron | 40.0% | |
CTCAAGAGAATATCTCCGAA+GGG | - | chr4.4:7163860-7163879 | MS.gene49777:intron | 40.0% | |
CTCGTTGGGGTAATATAGTT+TGG | - | chr4.4:7160979-7160998 | MS.gene49777:intron | 40.0% | |
CTTACGAGTCCTATATGAAG+GGG | - | chr4.4:7159850-7159869 | MS.gene49777:intron | 40.0% | |
GAAGAAGGACAAAAGAGCAA+AGG | - | chr4.4:7164245-7164264 | MS.gene49777:CDS | 40.0% | |
GAAGTAAAATCCACTAGTCC+AGG | + | chr4.4:7161030-7161049 | None:intergenic | 40.0% | |
GACTGGGAGGAACTAAATAA+AGG | - | chr4.4:7163387-7163406 | MS.gene49777:intron | 40.0% | |
GAGCTAAATAGTAGTAGGCT+AGG | - | chr4.4:7158227-7158246 | MS.gene49777:intron | 40.0% | |
GATGTTTATGAGTCTGCTGT+GGG | - | chr4.4:7164093-7164112 | MS.gene49777:intron | 40.0% | |
GCATTATGGATGTCAACCTA+GGG | + | chr4.4:7161064-7161083 | None:intergenic | 40.0% | |
GCCAATGTTTAGTAGTTCAG+AGG | + | chr4.4:7160299-7160318 | None:intergenic | 40.0% | |
GCCTCTGAACTACTAAACAT+TGG | - | chr4.4:7160295-7160314 | MS.gene49777:intron | 40.0% | |
GCTTACGAGTCCTATATGAA+GGG | - | chr4.4:7159849-7159868 | MS.gene49777:intron | 40.0% | |
GGCAGAGAGAAGATAACTTT+AGG | + | chr4.4:7158704-7158723 | None:intergenic | 40.0% | |
GGGAACAATCTGATCAGAAT+TGG | + | chr4.4:7157556-7157575 | None:intergenic | 40.0% | |
GTTCCCAAATTCTCAATCAC+TGG | - | chr4.4:7157570-7157589 | MS.gene49777:CDS | 40.0% | |
GTTTGAGCAAGATCAGAACT+GGG | - | chr4.4:7159881-7159900 | MS.gene49777:intron | 40.0% | |
TACGAGGAGTTAGGGAAATA+TGG | - | chr4.4:7160175-7160194 | MS.gene49777:intron | 40.0% | |
TAGTCACCGTAAGTCTTAAG+AGG | + | chr4.4:7158207-7158226 | None:intergenic | 40.0% | |
TATAAGCGAACAAGCTCTTC+AGG | + | chr4.4:7162169-7162188 | None:intergenic | 40.0% | |
TATTTCAGCGGACAAAAGAC+TGG | - | chr4.4:7161815-7161834 | MS.gene49777:intron | 40.0% | |
TCAGCAAAGCTAACTTCTTC+TGG | + | chr4.4:7162397-7162416 | None:intergenic | 40.0% | |
TCATGTGATTCTCTATTCGG+CGG | - | chr4.4:7159137-7159156 | MS.gene49777:intron | 40.0% | |
TCCCATCACGGTAGAATTTA+TGG | - | chr4.4:7162745-7162764 | MS.gene49777:intron | 40.0% | |
TCTGCTGAACATAACTCGTT+GGG | - | chr4.4:7160965-7160984 | MS.gene49777:intron | 40.0% | |
TCTTGCTTTCGCAAACATCA+AGG | + | chr4.4:7162893-7162912 | None:intergenic | 40.0% | |
TGAAGGCAGTATCTGATACT+AGG | + | chr4.4:7160250-7160269 | None:intergenic | 40.0% | |
TGAGATGCATTTGGTCCATT+TGG | + | chr4.4:7159201-7159220 | None:intergenic | 40.0% | |
TGATGATTTCGTATCAAGGC+GGG | + | chr4.4:7158953-7158972 | None:intergenic | 40.0% | |
TGATGGGAGCTTTACATACT+AGG | + | chr4.4:7162733-7162752 | None:intergenic | 40.0% | |
TGATGTTTATGAGTCTGCTG+TGG | - | chr4.4:7164092-7164111 | MS.gene49777:intron | 40.0% | |
TGCATCAGAAAAGAGAGATG+CGG | + | chr4.4:7158051-7158070 | None:intergenic | 40.0% | |
TGGAAAATGGGTAAAGAGTG+TGG | + | chr4.4:7158729-7158748 | None:intergenic | 40.0% | |
TGTTGCAAAGTCATACAGTG+TGG | - | chr4.4:7163085-7163104 | MS.gene49777:intron | 40.0% | |
TGTTTGAGCAAGATCAGAAC+TGG | - | chr4.4:7159880-7159899 | MS.gene49777:intron | 40.0% | |
! | ATCAATTGTTGTTGACTGGG+AGG | - | chr4.4:7163374-7163393 | MS.gene49777:intron | 40.0% |
! | CCCATGGATTCCATTTTCTT+AGG | + | chr4.4:7158365-7158384 | None:intergenic | 40.0% |
! | CGCTGAAATATTTTCTGCCA+AGG | + | chr4.4:7161805-7161824 | None:intergenic | 40.0% |
! | CTTTTGCCCATGCTGTAAAA+TGG | - | chr4.4:7160767-7160786 | MS.gene49777:intron | 40.0% |
! | GACATCCATAATGCTCCTTT+TGG | - | chr4.4:7161070-7161089 | MS.gene49777:intron | 40.0% |
! | GAGAGAAGATAACTTTAGGG+AGG | + | chr4.4:7158700-7158719 | None:intergenic | 40.0% |
! | GTATTGCAACAAAAGGCATG+TGG | - | chr4.4:7159343-7159362 | MS.gene49777:CDS | 40.0% |
! | GTATTTTCGCTGTTGCTAAC+TGG | - | chr4.4:7157792-7157811 | MS.gene49777:intron | 40.0% |
! | TATTTCCCACTCCTCTCTTT+TGG | - | chr4.4:7159447-7159466 | MS.gene49777:intron | 40.0% |
! | TTCACAATTTTGTGCGGTCA+AGG | - | chr4.4:7159275-7159294 | MS.gene49777:intron | 40.0% |
!! | ATAGGCGCTGATATCATAGT+AGG | + | chr4.4:7158447-7158466 | None:intergenic | 40.0% |
!! | CAAAATGGCAACCCTTGTTT+TGG | + | chr4.4:7160612-7160631 | None:intergenic | 40.0% |
!! | CCCAGTGTGTCATTTCTTAT+TGG | - | chr4.4:7162778-7162797 | MS.gene49777:intron | 40.0% |
!! | CTGATTTAGTCAGTTCTGGA+AGG | - | chr4.4:7162362-7162381 | MS.gene49777:intron | 40.0% |
!! | GAAGGGATATCTCTAAGATC+AGG | + | chr4.4:7162484-7162503 | None:intergenic | 40.0% |
!! | GATACAGAGCATTGCATGTT+AGG | - | chr4.4:7159592-7159611 | MS.gene49777:intron | 40.0% |
!! | TATTCGGGCTGATTTGGTAT+TGG | - | chr4.4:7161884-7161903 | MS.gene49777:CDS | 40.0% |
!! | TGTGCAGACTCTAAAGTTGT+TGG | + | chr4.4:7163516-7163535 | None:intergenic | 40.0% |
!! | TTGACTGGCCAATTTTGTGA+AGG | + | chr4.4:7160267-7160286 | None:intergenic | 40.0% |
!!! | ACAAGGGTTGCCATTTTGAA+AGG | - | chr4.4:7160614-7160633 | MS.gene49777:intron | 40.0% |
!!! | AGCTAACTTCTTCTGGCTTT+TGG | + | chr4.4:7162390-7162409 | None:intergenic | 40.0% |
!!! | CAGTAGTGGGCTTTTATACT+TGG | + | chr4.4:7158646-7158665 | None:intergenic | 40.0% |
!!! | TTTTTGCGATAAGCACTGGT+AGG | - | chr4.4:7158768-7158787 | MS.gene49777:intron | 40.0% |
AAGATCTCCTCTGATCTGTC+AGG | + | chr4.4:7163474-7163493 | None:intergenic | 45.0% | |
AAGGACAAAAGAGCAAAGGG+TGG | - | chr4.4:7164249-7164268 | MS.gene49777:CDS | 45.0% | |
ACGGAGATTACACTCGCTAT+CGG | - | chr4.4:7157766-7157785 | MS.gene49777:intron | 45.0% | |
ACTTTCTGCATTTCCTGCAG+TGG | + | chr4.4:7162002-7162021 | None:intergenic | 45.0% | |
AGAACATGCATTGGGGATCA+TGG | - | chr4.4:7163825-7163844 | MS.gene49777:CDS | 45.0% | |
ATACAGTGTGGCTGGAAAGA+GGG | - | chr4.4:7163097-7163116 | MS.gene49777:intron | 45.0% | |
CAACAAAAGGTTGCGCTCAA+TGG | + | chr4.4:7162083-7162102 | None:intergenic | 45.0% | |
CAGAGGCTTGTAGATTTGAC+TGG | + | chr4.4:7160282-7160301 | None:intergenic | 45.0% | |
CAGCATACAAACACATCGTC+AGG | + | chr4.4:7158596-7158615 | None:intergenic | 45.0% | |
CAGTCCTCACCCTATAGATT+AGG | - | chr4.4:7158620-7158639 | MS.gene49777:CDS | 45.0% | |
CATGCATGTGCAGTGCAATT+AGG | + | chr4.4:7162522-7162541 | None:intergenic | 45.0% | |
CATGGGCAAAAGAGACCATT+AGG | + | chr4.4:7160759-7160778 | None:intergenic | 45.0% | |
CTGCTGAACATAACTCGTTG+GGG | - | chr4.4:7160966-7160985 | MS.gene49777:intron | 45.0% | |
GAATACAGCCTCTAGCATCA+TGG | + | chr4.4:7161869-7161888 | None:intergenic | 45.0% | |
GACGATGTGTTTGTATGCTG+TGG | - | chr4.4:7158596-7158615 | MS.gene49777:CDS | 45.0% | |
GAGAAAAGGCAGCTTCCAAA+TGG | - | chr4.4:7159183-7159202 | MS.gene49777:intron | 45.0% | |
GAGCTGGAGAAAGATATCCA+TGG | - | chr4.4:7161777-7161796 | MS.gene49777:intron | 45.0% | |
GATATCTTTCTCCAGCTCCT+GGG | + | chr4.4:7161775-7161794 | None:intergenic | 45.0% | |
GATTGCAAAGCACACGTTTG+TGG | + | chr4.4:7158263-7158282 | None:intergenic | 45.0% | |
GCGACAGTTATAAGCATGAG+TGG | - | chr4.4:7158308-7158327 | MS.gene49777:intron | 45.0% | |
GGCTTACGAGTCCTATATGA+AGG | - | chr4.4:7159848-7159867 | MS.gene49777:intron | 45.0% | |
GTTACATACACGTGAGGCAA+AGG | + | chr4.4:7160734-7160753 | None:intergenic | 45.0% | |
GTTCACAGTCCATGTAATCG+TGG | - | chr4.4:7158337-7158356 | MS.gene49777:intron | 45.0% | |
TAGGTGGTTACATACACGTG+AGG | + | chr4.4:7160740-7160759 | None:intergenic | 45.0% | |
TCTGCATACCATGATGCTAG+AGG | - | chr4.4:7161858-7161877 | MS.gene49777:intron | 45.0% | |
TGATGCTAGAGGCTGTATTC+GGG | - | chr4.4:7161869-7161888 | MS.gene49777:CDS | 45.0% | |
TGCAGGAACAAGCTTATGCT+TGG | - | chr4.4:7159994-7160013 | MS.gene49777:CDS | 45.0% | |
TGCTATCAGCTCACCACTAT+CGG | - | chr4.4:7158487-7158506 | MS.gene49777:intron | 45.0% | |
TGCTCAATTGCCCTTTCCTA+GGG | + | chr4.4:7162943-7162962 | None:intergenic | 45.0% | |
TGGTCCAATGGATCTTGGAT+AGG | + | chr4.4:7158465-7158484 | None:intergenic | 45.0% | |
TTGCAACCCTGACCAACAAA+AGG | + | chr4.4:7162096-7162115 | None:intergenic | 45.0% | |
TTGGCCTAATCTATAGGGTG+AGG | + | chr4.4:7158627-7158646 | None:intergenic | 45.0% | |
! | AAATGGGTAAAGAGTGTGGC+AGG | + | chr4.4:7158725-7158744 | None:intergenic | 45.0% |
! | AACAAAAGGCATGTGGCAAC+TGG | - | chr4.4:7159350-7159369 | MS.gene49777:CDS | 45.0% |
! | AATTTTATCAGCCCAGGAGC+TGG | - | chr4.4:7161761-7161780 | MS.gene49777:intron | 45.0% |
! | AGGTCTTGTCTCATCCAATG+TGG | + | chr4.4:7158576-7158595 | None:intergenic | 45.0% |
! | CATTGAGCGCAACCTTTTGT+TGG | - | chr4.4:7162081-7162100 | MS.gene49777:intron | 45.0% |
! | GGTCTTGTCTCATCCAATGT+GGG | + | chr4.4:7158575-7158594 | None:intergenic | 45.0% |
! | TAGGACATCTTTGGAAGCTG+AGG | - | chr4.4:7159305-7159324 | MS.gene49777:intron | 45.0% |
! | TCTTAGGTGCCACGATTACA+TGG | + | chr4.4:7158349-7158368 | None:intergenic | 45.0% |
! | TGCACAGTGTTTTCGCGATA+TGG | - | chr4.4:7163530-7163549 | MS.gene49777:intron | 45.0% |
!! | ACCAAGTTTTGTGTCGTGAG+CGG | - | chr4.4:7160209-7160228 | MS.gene49777:intron | 45.0% |
!! | ACTTCTGACTTGGATACCCT+AGG | - | chr4.4:7161045-7161064 | MS.gene49777:intron | 45.0% |
!! | GGCAGATTCTAGGACATCTT+TGG | - | chr4.4:7159296-7159315 | MS.gene49777:intron | 45.0% |
!! | TTTCGGATCATCGACTTCCA+TGG | + | chr4.4:7157529-7157548 | None:intergenic | 45.0% |
!!! | CTGCTTTTTGCGATAAGCAC+TGG | - | chr4.4:7158764-7158783 | MS.gene49777:intron | 45.0% |
!!! | GGGTTGCCATTTTGAAAGGT+TGG | - | chr4.4:7160618-7160637 | MS.gene49777:intron | 45.0% |
!!! | GTTTGGCTTTTCGAGCAGAA+AGG | - | chr4.4:7162434-7162453 | MS.gene49777:intron | 45.0% |
!! | TAATAATATATTTCTTAATA+TGG | - | chr4.4:7161283-7161302 | MS.gene49777:intron | 5.0% |
AAGGCTGTCAGTGCTGTCTT+AGG | - | chr4.4:7162049-7162068 | MS.gene49777:intron | 50.0% | |
AAGGGCAATTGAGCAGTAGG+TGG | - | chr4.4:7162948-7162967 | MS.gene49777:intron | 50.0% | |
ACACGCCTGATGTGAAGTCT+TGG | - | chr4.4:7158522-7158541 | MS.gene49777:intron | 50.0% | |
ACATGCATTGGGGATCATGG+AGG | - | chr4.4:7163828-7163847 | MS.gene49777:CDS | 50.0% | |
AGCGCCTATCCAAGATCCAT+TGG | - | chr4.4:7158458-7158477 | MS.gene49777:intron | 50.0% | |
AGGCTGTATTCGGGCTGATT+TGG | - | chr4.4:7161878-7161897 | MS.gene49777:CDS | 50.0% | |
AGGGCTGTATACGAGGAGTT+AGG | - | chr4.4:7160166-7160185 | MS.gene49777:intron | 50.0% | |
ATTATGTACCCGCTCAGCTC+CGG | + | chr4.4:7163905-7163924 | None:intergenic | 50.0% | |
ATTGTACAGCCCGATTGAGG+AGG | - | chr4.4:7157928-7157947 | MS.gene49777:CDS | 50.0% | |
CACGCCTGATGTGAAGTCTT+GGG | - | chr4.4:7158523-7158542 | MS.gene49777:intron | 50.0% | |
CAGGCCTGTAGACCTAAAGA+TGG | - | chr4.4:7163436-7163455 | MS.gene49777:intron | 50.0% | |
CATACAGTGTGGCTGGAAAG+AGG | - | chr4.4:7163096-7163115 | MS.gene49777:intron | 50.0% | |
CATCTTTAGGTCTACAGGCC+TGG | + | chr4.4:7163438-7163457 | None:intergenic | 50.0% | |
CATGCCCAAGACTTCACATC+AGG | + | chr4.4:7158530-7158549 | None:intergenic | 50.0% | |
CATGTCGATGTCAGAGCCAA+AGG | - | chr4.4:7161322-7161341 | MS.gene49777:intron | 50.0% | |
CATGTGGATGTCAGAGCCAA+AGG | - | chr4.4:7161184-7161203 | MS.gene49777:CDS | 50.0% | |
CTGCTCAATTGCCCTTTCCT+AGG | + | chr4.4:7162944-7162963 | None:intergenic | 50.0% | |
GAGCAGAAAGGTTGTCTTGC+TGG | - | chr4.4:7162446-7162465 | MS.gene49777:intron | 50.0% | |
GATGTGAAGTCTTGGGCATG+AGG | - | chr4.4:7158530-7158549 | MS.gene49777:intron | 50.0% | |
GATGTGGTTATACTGCCAGC+AGG | + | chr4.4:7162988-7163007 | None:intergenic | 50.0% | |
GCAAAGTCATACAGTGTGGC+TGG | - | chr4.4:7163089-7163108 | MS.gene49777:intron | 50.0% | |
GCAAGATCAGAACTGGGATG+TGG | - | chr4.4:7159887-7159906 | MS.gene49777:intron | 50.0% | |
GCAGTAGGTGGTGATTACTG+TGG | - | chr4.4:7162960-7162979 | MS.gene49777:intron | 50.0% | |
GCTATCAGCTCACCACTATC+GGG | - | chr4.4:7158488-7158507 | MS.gene49777:intron | 50.0% | |
GCTCAATTGCCCTTTCCTAG+GGG | + | chr4.4:7162942-7162961 | None:intergenic | 50.0% | |
GGAAAGGGCAATTGAGCAGT+AGG | - | chr4.4:7162945-7162964 | MS.gene49777:intron | 50.0% | |
GGAGTCATGCCATGGAGAAA+AGG | - | chr4.4:7159169-7159188 | MS.gene49777:intron | 50.0% | |
GGATATCTTTCTCCAGCTCC+TGG | + | chr4.4:7161776-7161795 | None:intergenic | 50.0% | |
GGGCAAAAGAGACCATTAGG+TGG | + | chr4.4:7160756-7160775 | None:intergenic | 50.0% | |
GGGCTGTATACGAGGAGTTA+GGG | - | chr4.4:7160167-7160186 | MS.gene49777:intron | 50.0% | |
GGTATTGTACAGCCCGATTG+AGG | - | chr4.4:7157925-7157944 | MS.gene49777:CDS | 50.0% | |
GTTGCGCAAGGCAGTAAAGT+GGG | - | chr4.4:7159242-7159261 | MS.gene49777:intron | 50.0% | |
TACGCAAGGTCCAGCACAAT+CGG | + | chr4.4:7164189-7164208 | None:intergenic | 50.0% | |
TATCATTGACCGGAGCTGAG+CGG | - | chr4.4:7163893-7163912 | MS.gene49777:intron | 50.0% | |
TCGCTGTTGCTAACTGGATG+CGG | - | chr4.4:7157798-7157817 | MS.gene49777:intron | 50.0% | |
TCTGATTGGTAGGTTGCGCA+AGG | - | chr4.4:7159230-7159249 | MS.gene49777:intron | 50.0% | |
TTGAAGTTTACCCACGGTCG+TGG | - | chr4.4:7157963-7157982 | MS.gene49777:CDS | 50.0% | |
TTGAGATCTTGCCTCAGCCA+TGG | + | chr4.4:7160531-7160550 | None:intergenic | 50.0% | |
! | AGCGCAACCTTTTGTTGGTC+AGG | - | chr4.4:7162086-7162105 | MS.gene49777:intron | 50.0% |
! | ATGCAGCATGGTTTGCGTCA+CGG | - | chr4.4:7157747-7157766 | MS.gene49777:intron | 50.0% |
! | CTTTAGGGAGGGTGATAGAC+AGG | + | chr4.4:7158688-7158707 | None:intergenic | 50.0% |
! | GATAGTGGTGAGCTGATAGC+AGG | + | chr4.4:7158488-7158507 | None:intergenic | 50.0% |
! | GCGAACAAGCTCTTCAGGTT+TGG | + | chr4.4:7162164-7162183 | None:intergenic | 50.0% |
! | GCGCAACCTTTTGTTGGTCA+GGG | - | chr4.4:7162087-7162106 | MS.gene49777:intron | 50.0% |
! | TGGAAGCTGCCTTTTCTCCA+TGG | + | chr4.4:7159181-7159200 | None:intergenic | 50.0% |
! | TGTGCATTTTAGGCCACTGC+AGG | - | chr4.4:7161986-7162005 | MS.gene49777:intron | 50.0% |
! | TTCTCTGATCCCTGGACTAG+TGG | - | chr4.4:7161017-7161036 | MS.gene49777:intron | 50.0% |
!! | CCAAGTTTTGTGTCGTGAGC+GGG | - | chr4.4:7160210-7160229 | MS.gene49777:intron | 50.0% |
ACACGTGAGGCAAAGGTGAG+AGG | + | chr4.4:7160727-7160746 | None:intergenic | 55.0% | |
ACGCAAGGTCCAGCACAATC+GGG | + | chr4.4:7164188-7164207 | None:intergenic | 55.0% | |
AGGTCTACAGGCCTGGTTGA+AGG | + | chr4.4:7163431-7163450 | None:intergenic | 55.0% | |
AGTGGCTCAAGAGCGAGAAC+AGG | + | chr4.4:7158866-7158885 | None:intergenic | 55.0% | |
AGTGGTGAGCTGATAGCAGG+TGG | + | chr4.4:7158485-7158504 | None:intergenic | 55.0% | |
ATCATTGACCGGAGCTGAGC+GGG | - | chr4.4:7163894-7163913 | MS.gene49777:intron | 55.0% | |
CAATTGCCTGGAAAGCTGGG+GGG | + | chr4.4:7164158-7164177 | None:intergenic | 55.0% | |
CCCGCTCACGACACAAAACT+TGG | + | chr4.4:7160213-7160232 | None:intergenic | 55.0% | |
CGTATACTTGCCACGACCGT+GGG | + | chr4.4:7157976-7157995 | None:intergenic | 55.0% | |
CTCATAGGGCCCCTAGGAAA+GGG | - | chr4.4:7162930-7162949 | MS.gene49777:intron | 55.0% | |
GAGAGCTTGGAGTCATGCCA+TGG | - | chr4.4:7159161-7159180 | MS.gene49777:intron | 55.0% | |
GCAATTGCCTGGAAAGCTGG+GGG | + | chr4.4:7164159-7164178 | None:intergenic | 55.0% | |
GCAGGTGGTCCAATGGATCT+TGG | + | chr4.4:7158470-7158489 | None:intergenic | 55.0% | |
GCTGATAGCAGGTGGTCCAA+TGG | + | chr4.4:7158477-7158496 | None:intergenic | 55.0% | |
GGCAATTGCCTGGAAAGCTG+GGG | + | chr4.4:7164160-7164179 | None:intergenic | 55.0% | |
GGGCAATTGCCTGGAAAGCT+GGG | + | chr4.4:7164161-7164180 | None:intergenic | 55.0% | |
GGTCCAGCACAATCGGGTTA+CGG | + | chr4.4:7164182-7164201 | None:intergenic | 55.0% | |
GGTTGCGCAAGGCAGTAAAG+TGG | - | chr4.4:7159241-7159260 | MS.gene49777:intron | 55.0% | |
GTCCAGCACAATCGGGTTAC+GGG | + | chr4.4:7164181-7164200 | None:intergenic | 55.0% | |
GTGATTACTGTGGTGCCTGC+TGG | - | chr4.4:7162970-7162989 | MS.gene49777:intron | 55.0% | |
GTGCGGTCAAGGCAGATTCT+AGG | - | chr4.4:7159286-7159305 | MS.gene49777:intron | 55.0% | |
GTGGCTCAAGAGCGAGAACA+GGG | + | chr4.4:7158865-7158884 | None:intergenic | 55.0% | |
GTGTTTGTACCAGGCTGCCA+TGG | - | chr4.4:7160511-7160530 | MS.gene49777:intron | 55.0% | |
TATCGGGCCTGACAGATCAG+AGG | - | chr4.4:7163464-7163483 | MS.gene49777:intron | 55.0% | |
TCGTATACTTGCCACGACCG+TGG | + | chr4.4:7157977-7157996 | None:intergenic | 55.0% | |
TCTATTCGGCGGAGAGAGCT+TGG | - | chr4.4:7159148-7159167 | MS.gene49777:intron | 55.0% | |
TCTCATAGGGCCCCTAGGAA+AGG | - | chr4.4:7162929-7162948 | MS.gene49777:intron | 55.0% | |
TGGGGATCATGGAGGAGAAG+AGG | - | chr4.4:7163836-7163855 | MS.gene49777:CDS | 55.0% | |
TTTCCTAGGGGCCCTATGAG+AGG | + | chr4.4:7162930-7162949 | None:intergenic | 55.0% | |
!! | TTTGTGTCGTGAGCGGGTTG+AGG | - | chr4.4:7160216-7160235 | MS.gene49777:intron | 55.0% |
AGGGATCAGACCGCTTCCCA+TGG | + | chr4.4:7158381-7158400 | None:intergenic | 60.0% | |
CGGGCAATTGCCTGGAAAGC+TGG | + | chr4.4:7164162-7164181 | None:intergenic | 60.0% | |
CTCACCACTATCGGGCGACT+CGG | - | chr4.4:7158496-7158515 | MS.gene49777:intron | 60.0% | |
GGGAGGGTGATAGACAGGAG+TGG | + | chr4.4:7158683-7158702 | None:intergenic | 60.0% | |
TCACCACTATCGGGCGACTC+GGG | - | chr4.4:7158497-7158516 | MS.gene49777:intron | 60.0% | |
TCGGGTTACGGGCAATTGCC+TGG | + | chr4.4:7164170-7164189 | None:intergenic | 60.0% | |
TCTCCTCTCATAGGGCCCCT+AGG | - | chr4.4:7162924-7162943 | MS.gene49777:intron | 60.0% | |
TGCCCGTAACCCGATTGTGC+TGG | - | chr4.4:7164176-7164195 | MS.gene49777:intron | 60.0% | |
CTGGGGGGAAGGGAGCAATG+CGG | + | chr4.4:7164143-7164162 | None:intergenic | 65.0% | |
GCCTGGAAAGCTGGGGGGAA+GGG | + | chr4.4:7164153-7164172 | None:intergenic | 65.0% | |
GTACCAGGCTGCCATGGCTG+AGG | - | chr4.4:7160517-7160536 | MS.gene49777:intron | 65.0% | |
TCCCTTCCCCCCAGCTTTCC+AGG | - | chr4.4:7164149-7164168 | MS.gene49777:intron | 65.0% | |
TGACCCGAGTCGCCCGATAG+TGG | + | chr4.4:7158503-7158522 | None:intergenic | 65.0% | |
TGCCTGGAAAGCTGGGGGGA+AGG | + | chr4.4:7164154-7164173 | None:intergenic | 65.0% | |
TGGGGGGAAGGGAGCAATGC+GGG | + | chr4.4:7164142-7164161 | None:intergenic | 65.0% | |
TTGCCTCAGCCATGGCAGCC+TGG | + | chr4.4:7160523-7160542 | None:intergenic | 65.0% | |
GGGGGGAAGGGAGCAATGCG+GGG | + | chr4.4:7164141-7164160 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 7157501 | 7164296 | 7157501 | ID=MS.gene49777 |
chr4.4 | mRNA | 7157501 | 7164296 | 7157501 | ID=MS.gene49777.t1;Parent=MS.gene49777 |
chr4.4 | exon | 7164206 | 7164296 | 7164206 | ID=MS.gene49777.t1.exon1;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7164206 | 7164296 | 7164206 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7164010 | 7164076 | 7164010 | ID=MS.gene49777.t1.exon2;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7164010 | 7164076 | 7164010 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7163764 | 7163874 | 7163764 | ID=MS.gene49777.t1.exon3;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7163764 | 7163874 | 7163764 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7162471 | 7162666 | 7162471 | ID=MS.gene49777.t1.exon4;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7162471 | 7162666 | 7162471 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7161863 | 7161948 | 7161863 | ID=MS.gene49777.t1.exon5;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7161863 | 7161948 | 7161863 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7161434 | 7161629 | 7161434 | ID=MS.gene49777.t1.exon6;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7161434 | 7161629 | 7161434 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7161162 | 7161273 | 7161162 | ID=MS.gene49777.t1.exon7;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7161162 | 7161273 | 7161162 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7159898 | 7160025 | 7159898 | ID=MS.gene49777.t1.exon8;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7159898 | 7160025 | 7159898 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7159593 | 7159799 | 7159593 | ID=MS.gene49777.t1.exon9;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7159593 | 7159799 | 7159593 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7159342 | 7159451 | 7159342 | ID=MS.gene49777.t1.exon10;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7159342 | 7159451 | 7159342 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7158592 | 7158721 | 7158592 | ID=MS.gene49777.t1.exon11;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7158592 | 7158721 | 7158592 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7157882 | 7158028 | 7157882 | ID=MS.gene49777.t1.exon12;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7157882 | 7158028 | 7157882 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
chr4.4 | exon | 7157501 | 7157731 | 7157501 | ID=MS.gene49777.t1.exon13;Parent=MS.gene49777.t1 |
chr4.4 | CDS | 7157501 | 7157731 | 7157501 | ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1 |
Gene Sequence |
Protein sequence |