AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene49777


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49777.t1 MTR_8g100110 99.171 603 5 0 1 603 1 603 0.0 1238
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene49777.t1 AT5G61970 74.917 602 144 3 1 599 1 598 0.0 950

Find 142 sgRNAs with CRISPR-Local

Find 455 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACCAGTGATTGAGAATT+TGG 0.115111 4.4:+7164201 None:intergenic
AGCTAACTTCTTCTGGCTTT+TGG 0.191919 4.4:+7159388 None:intergenic
GGCTTTATAAGCAGAATATT+TGG 0.214752 4.4:-7157505 MS.gene49777:CDS
CCTCTAGTTTAGCTTTAAAA+AGG 0.275792 4.4:+7161433 None:intergenic
CAAAATGGCAACCCTTGTTT+TGG 0.275936 4.4:+7161166 None:intergenic
TGATCAGAATTGGTTGATTT+CGG 0.285982 4.4:+7164232 None:intergenic
TCAGCAAAGCTAACTTCTTC+TGG 0.288214 4.4:+7159381 None:intergenic
TCTTCATGTGATTCTCTATT+CGG 0.294404 4.4:-7162641 MS.gene49777:CDS
CTATCTGATTTAGTCAGTTC+TGG 0.303730 4.4:-7159417 MS.gene49777:CDS
AGATACTGCCTTCACAAAAT+TGG 0.305322 4.4:-7161519 MS.gene49777:CDS
GGCAGATTCTAGGACATCTT+TGG 0.324881 4.4:-7162479 MS.gene49777:CDS
TACGAGGAGTTAGGGAAATA+TGG 0.327193 4.4:-7161600 MS.gene49777:CDS
CTTCCATGACAGAATTTCAT+TGG 0.334299 4.4:-7161217 MS.gene49777:CDS
GTGCGGTCAAGGCAGATTCT+AGG 0.336790 4.4:-7162489 MS.gene49777:CDS
GTTAGGGAAATATGGAGATT+TGG 0.338508 4.4:-7161592 MS.gene49777:CDS
CGGGCAATTGCCTGGAAAGC+TGG 0.340905 4.4:+7157616 None:intergenic
GGATATCTTTCTCCAGCTCC+TGG 0.341220 4.4:+7160002 None:intergenic
ACTACTAAACATTGGCGATA+TGG 0.346999 4.4:-7161472 MS.gene49777:CDS
CATTTGATATTGGAAATCTA+TGG 0.352525 4.4:+7161189 None:intergenic
AGGCTGTATTCGGGCTGATT+TGG 0.353297 4.4:-7159897 MS.gene49777:intron
AATTCCCAGATATTCAAAAT+AGG 0.359611 4.4:-7157555 MS.gene49777:CDS
AAGATACCAACCTTTCAAAA+TGG 0.363789 4.4:+7161151 None:intergenic
TATAAGCGAACAAGCTCTTC+AGG 0.367288 4.4:+7159609 None:intergenic
ATGATGCTAGAGGCTGTATT+CGG 0.368177 4.4:-7159907 MS.gene49777:CDS
AGGGCTGTATACGAGGAGTT+AGG 0.371688 4.4:-7161609 MS.gene49777:CDS
GGAAAGCTTCAAATGTTAGA+TGG 0.373121 4.4:-7158602 MS.gene49777:CDS
AAGGCTGTCAGTGCTGTCTT+AGG 0.375481 4.4:-7159726 MS.gene49777:CDS
GGGAACAATCTGATCAGAAT+TGG 0.378268 4.4:+7164222 None:intergenic
GTCCAGCACAATCGGGTTAC+GGG 0.380969 4.4:+7157597 None:intergenic
TGAGATGCATTTGGTCCATT+TGG 0.384327 4.4:+7162577 None:intergenic
GGGCAATTGCCTGGAAAGCT+GGG 0.390320 4.4:+7157617 None:intergenic
AAACATCAAGTTTCTCCAAT+AGG 0.391438 4.4:+7157698 None:intergenic
AGCTCCGGTCAATGATATAT+TGG 0.393649 4.4:+7157888 None:intergenic
TACGCAAGGTCCAGCACAAT+CGG 0.400545 4.4:+7157589 None:intergenic
TCAGTTGGAGAAATTCCTAT+TGG 0.402440 4.4:-7157713 MS.gene49777:intron
ATTTATACAACCTCCTCAAT+CGG 0.402621 4.4:+7163837 None:intergenic
CTTATATGATCTCTTGCTAC+AGG 0.403111 4.4:-7159592 MS.gene49777:intron
GACTATGGTGAAAGAATTAG+AGG 0.405813 4.4:-7158007 MS.gene49777:CDS
TGTTTGAGCAAGATCAGAAC+TGG 0.406278 4.4:-7161895 MS.gene49777:CDS
CAACAAAAGGTTGCGCTCAA+TGG 0.416938 4.4:+7159695 None:intergenic
AGAGTGTTCATGCAAAAGTT+TGG 0.418884 4.4:-7159358 MS.gene49777:CDS
GCGAACAAGCTCTTCAGGTT+TGG 0.420651 4.4:+7159614 None:intergenic
ATGACAGAATTTCATTGGCT+TGG 0.420947 4.4:-7161212 MS.gene49777:CDS
GGTCCAGCACAATCGGGTTA+CGG 0.428004 4.4:+7157596 None:intergenic
TAGATTCGTTGAGATGCATT+TGG 0.428149 4.4:+7162568 None:intergenic
CAACAAACTCCCCTTCATAT+AGG 0.430300 4.4:+7161916 None:intergenic
AAACCAGTGATTGAGAATTT+GGG 0.431036 4.4:+7164202 None:intergenic
TCGGGTTACGGGCAATTGCC+TGG 0.434213 4.4:+7157608 None:intergenic
AGTTGTATAGAACATGCATT+GGG 0.445865 4.4:-7157958 MS.gene49777:CDS
AGAACATGCATTGGGGATCA+TGG 0.454533 4.4:-7157950 MS.gene49777:CDS
GTTCCCAAATTCTCAATCAC+TGG 0.456061 4.4:-7164205 MS.gene49777:intron
TGATGCTAGAGGCTGTATTC+GGG 0.459700 4.4:-7159906 MS.gene49777:CDS
TGAAGGCAGTATCTGATACT+AGG 0.459854 4.4:+7161528 None:intergenic
TCTATTCGGCGGAGAGAGCT+TGG 0.459965 4.4:-7162627 MS.gene49777:CDS
AGTGACATTAGACTCAGTTA+AGG 0.466330 4.4:+7163772 None:intergenic
ATCATTGACCGGAGCTGAGC+GGG 0.467588 4.4:-7157881 MS.gene49777:intron
CCCGCTCACGACACAAAACT+TGG 0.470661 4.4:+7161565 None:intergenic
AATGTTAGATGGCAATAGTA+AGG 0.476979 4.4:-7158591 MS.gene49777:intron
TTGCAACCCTGACCAACAAA+AGG 0.482338 4.4:+7159682 None:intergenic
CAGAGGCTTGTAGATTTGAC+TGG 0.485146 4.4:+7161496 None:intergenic
GAAAGATATCCATGGTCCCT+TGG 0.491522 4.4:-7159990 MS.gene49777:CDS
GAGAAAAGGCAGCTTCCAAA+TGG 0.491978 4.4:-7162592 MS.gene49777:CDS
GGGCTGTATACGAGGAGTTA+GGG 0.493311 4.4:-7161608 MS.gene49777:CDS
TCTCAACGAATCTATCTGAT+TGG 0.494018 4.4:-7162559 MS.gene49777:CDS
TGCCCGTAACCCGATTGTGC+TGG 0.494225 4.4:-7157599 MS.gene49777:CDS
AGTCTAATGTCACTGAAGTA+AGG 0.494583 4.4:-7163763 MS.gene49777:intron
GGCTTACGAGTCCTATATGA+AGG 0.496687 4.4:-7161927 MS.gene49777:CDS
AGTTTAGCTGAAGATGCCTT+AGG 0.498692 4.4:-7158623 MS.gene49777:CDS
GGAGTCATGCCATGGAGAAA+AGG 0.500377 4.4:-7162606 MS.gene49777:CDS
CAATATCAAATGCCAAAACA+AGG 0.504437 4.4:-7161178 MS.gene49777:CDS
TCGTATACTTGCCACGACCG+TGG 0.504552 4.4:+7163801 None:intergenic
TTGAGATCTTGCCTCAGCCA+TGG 0.506412 4.4:+7161247 None:intergenic
TATTTCAGCGGACAAAAGAC+TGG 0.510192 4.4:-7159960 MS.gene49777:CDS
ACTTTCTGCATTTCCTGCAG+TGG 0.513474 4.4:+7159776 None:intergenic
CATACAGTGTGGCTGGAAAG+AGG 0.514081 4.4:-7158679 MS.gene49777:CDS
ATTATGTACCCGCTCAGCTC+CGG 0.514586 4.4:+7157873 None:intergenic
TGATTTGAATGGTCTTGATA+AGG 0.515403 4.4:-7159745 MS.gene49777:CDS
TTGAAGTTTACCCACGGTCG+TGG 0.516226 4.4:-7163812 MS.gene49777:CDS
TTTATACAACCTCCTCAATC+GGG 0.522055 4.4:+7163838 None:intergenic
CGTATACTTGCCACGACCGT+GGG 0.522528 4.4:+7163802 None:intergenic
GATATCTTTCTCCAGCTCCT+GGG 0.522684 4.4:+7160003 None:intergenic
TAAAGCACTTCAAAAGTGCT+AGG 0.524363 4.4:-7161862 MS.gene49777:intron
TGATGTTTATGAGTCTGCTG+TGG 0.529265 4.4:-7157683 MS.gene49777:CDS
GTGTTTGTACCAGGCTGCCA+TGG 0.530914 4.4:-7161264 MS.gene49777:intron
TAACATTTGAAGCTTTCCTA+AGG 0.531683 4.4:+7158607 None:intergenic
GGTATTGTACAGCCCGATTG+AGG 0.540160 4.4:-7163850 MS.gene49777:CDS
ATCTCCAATATATCATTGAC+CGG 0.542724 4.4:-7157892 MS.gene49777:CDS
CTGATTTAGTCAGTTCTGGA+AGG 0.544771 4.4:-7159413 MS.gene49777:CDS
TGATATATTGGAGATCCCTT+CGG 0.546542 4.4:+7157900 None:intergenic
TGATTTAGTCAGTTCTGGAA+GGG 0.550208 4.4:-7159412 MS.gene49777:CDS
GCAAAGTCATACAGTGTGGC+TGG 0.551315 4.4:-7158686 MS.gene49777:CDS
GATGTTTATGAGTCTGCTGT+GGG 0.553817 4.4:-7157682 MS.gene49777:CDS
TATTCAAAATAGGATGAAGA+AGG 0.553984 4.4:-7157545 MS.gene49777:CDS
AGAGAATCAATCATCTGCCA+TGG 0.554301 4.4:-7164266 MS.gene49777:CDS
ACGCAAGGTCCAGCACAATC+GGG 0.554921 4.4:+7157590 None:intergenic
TTTGTGTCGTGAGCGGGTTG+AGG 0.555876 4.4:-7161559 MS.gene49777:CDS
GTACCAGGCTGCCATGGCTG+AGG 0.557385 4.4:-7161258 MS.gene49777:intron
GCAATTGCCTGGAAAGCTGG+GGG 0.559921 4.4:+7157619 None:intergenic
GCCAATGTTTAGTAGTTCAG+AGG 0.565196 4.4:+7161479 None:intergenic
AAGAAGGACAAAAGAGCAAA+GGG 0.565383 4.4:-7157529 MS.gene49777:CDS
ATACAGTGTGGCTGGAAAGA+GGG 0.567964 4.4:-7158678 MS.gene49777:CDS
GGCAATTGCCTGGAAAGCTG+GGG 0.568944 4.4:+7157618 None:intergenic
CAGTTGTATAGAACATGCAT+TGG 0.572812 4.4:-7157959 MS.gene49777:CDS
GTTCTATACAACTGTTAGAA+CGG 0.575188 4.4:+7157968 None:intergenic
TGGGGATCATGGAGGAGAAG+AGG 0.577029 4.4:-7157939 MS.gene49777:CDS
GAATACAGCCTCTAGCATCA+TGG 0.586389 4.4:+7159909 None:intergenic
TCTGCATACCATGATGCTAG+AGG 0.587070 4.4:-7159917 MS.gene49777:CDS
TAGGACATCTTTGGAAGCTG+AGG 0.588289 4.4:-7162470 MS.gene49777:intron
TTTCGGATCATCGACTTCCA+TGG 0.588879 4.4:+7164249 None:intergenic
GCAAGATCAGAACTGGGATG+TGG 0.590766 4.4:-7161888 MS.gene49777:CDS
ATGCAGCATGGTTTGCGTCA+CGG 0.594530 4.4:-7164028 MS.gene49777:CDS
GAGAGCTTGGAGTCATGCCA+TGG 0.598852 4.4:-7162614 MS.gene49777:CDS
CTAAACATTGGCGATATGGA+AGG 0.599650 4.4:-7161468 MS.gene49777:CDS
GCCTCTGAACTACTAAACAT+TGG 0.599852 4.4:-7161480 MS.gene49777:CDS
GGTTGCGCAAGGCAGTAAAG+TGG 0.604150 4.4:-7162534 MS.gene49777:CDS
AAGCCAATGAAATTCTGTCA+TGG 0.604976 4.4:+7161214 None:intergenic
CTCAAGAGAATATCTCCGAA+GGG 0.608613 4.4:-7157915 MS.gene49777:CDS
GAAGAAGGACAAAAGAGCAA+AGG 0.610571 4.4:-7157530 MS.gene49777:CDS
ACTCAAGAGAATATCTCCGA+AGG 0.611069 4.4:-7157916 MS.gene49777:CDS
TCATGTGATTCTCTATTCGG+CGG 0.614718 4.4:-7162638 MS.gene49777:CDS
GCTTACGAGTCCTATATGAA+GGG 0.614942 4.4:-7161926 MS.gene49777:CDS
ATTCGATAGTGTTATACGCA+AGG 0.621387 4.4:+7157575 None:intergenic
AACGAATCTATCTGATTGGT+AGG 0.622250 4.4:-7162555 MS.gene49777:CDS
AAATCTTTGAAGTTTACCCA+CGG 0.622381 4.4:-7163818 MS.gene49777:CDS
ATTGTACAGCCCGATTGAGG+AGG 0.626640 4.4:-7163847 MS.gene49777:CDS
TCTGATTGGTAGGTTGCGCA+AGG 0.628782 4.4:-7162545 MS.gene49777:CDS
GTTGCGCAAGGCAGTAAAGT+GGG 0.628797 4.4:-7162533 MS.gene49777:CDS
ACGGAGATTACACTCGCTAT+CGG 0.630014 4.4:-7164009 MS.gene49777:intron
AAATCAGCACAAATGCAGCA+TGG 0.634136 4.4:-7164040 MS.gene49777:CDS
ATTTAACAGGGCTGTATACG+AGG 0.648075 4.4:-7161616 MS.gene49777:intron
AATATCAAATGCCAAAACAA+GGG 0.652385 4.4:-7161177 MS.gene49777:CDS
AGTGTGAAAGATGATTTGAA+TGG 0.655868 4.4:-7159756 MS.gene49777:CDS
CTTACGAGTCCTATATGAAG+GGG 0.656319 4.4:-7161925 MS.gene49777:CDS
CTTGGCAGAAAATATTTCAG+CGG 0.661052 4.4:-7159972 MS.gene49777:CDS
CAATTGCCTGGAAAGCTGGG+GGG 0.661981 4.4:+7157620 None:intergenic
TATCATTGACCGGAGCTGAG+CGG 0.688933 4.4:-7157882 MS.gene49777:CDS
ACATGCATTGGGGATCATGG+AGG 0.704917 4.4:-7157947 MS.gene49777:CDS
GAGCTGGAGAAAGATATCCA+TGG 0.711540 4.4:-7159998 MS.gene49777:CDS
GTTTGAGCAAGATCAGAACT+GGG 0.716721 4.4:-7161894 MS.gene49777:CDS
AAGGACAAAAGAGCAAAGGG+TGG 0.733205 4.4:-7157526 MS.gene49777:CDS
GTTGTATAGAACATGCATTG+GGG 0.748586 4.4:-7157957 MS.gene49777:CDS
TGTTGCAAAGTCATACAGTG+TGG 0.777758 4.4:-7158690 MS.gene49777:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATTAAATTGAAAAAAAAA+AGG - chr4.4:7160665-7160684 MS.gene49777:intron 10.0%
!! TAAATATATGCTAAAAATAT+TGG - chr4.4:7160885-7160904 MS.gene49777:intron 10.0%
!!! ATTTTTAAAAAAAAGGAAAA+AGG + chr4.4:7159002-7159021 None:intergenic 10.0%
!!! GTAAAACATTTTTAAAAAAA+AGG + chr4.4:7159009-7159028 None:intergenic 10.0%
!! AAATCCAAAAAAGAAAAAAA+TGG + chr4.4:7161625-7161644 None:intergenic 15.0%
!! AAGTCAAATATTATAAATCA+AGG + chr4.4:7159955-7159974 None:intergenic 15.0%
!! AATCATATTCTAAATTTAGA+AGG + chr4.4:7163586-7163605 None:intergenic 15.0%
!! ATAGATTAAAATAGTAGAAA+AGG + chr4.4:7159762-7159781 None:intergenic 15.0%
!! TAACAAATATATTATGTGTA+TGG + chr4.4:7161138-7161157 None:intergenic 15.0%
!! TAGATTAAAATAGTAGAAAA+GGG + chr4.4:7159761-7159780 None:intergenic 15.0%
!! TTGATTTATAATATTTGACT+TGG - chr4.4:7159954-7159973 MS.gene49777:CDS 15.0%
!!! AAATAAAAAACTCTAAAGAT+GGG + chr4.4:7162678-7162697 None:intergenic 15.0%
!!! AAATAAACTTTTCATTTTTC+TGG - chr4.4:7159047-7159066 MS.gene49777:intron 15.0%
!!! ACATAATATATTTGTTAATG+TGG - chr4.4:7161141-7161160 MS.gene49777:intron 15.0%
!!! AGTTATTTTTTAAGATCAAA+TGG - chr4.4:7163214-7163233 MS.gene49777:intron 15.0%
!!! GATTTTTCAAATGATTTTTT+TGG - chr4.4:7163258-7163277 MS.gene49777:intron 15.0%
!!! TAAATAAAAAACTCTAAAGA+TGG + chr4.4:7162679-7162698 None:intergenic 15.0%
!!! TTTTACAGAAGTTAAAAATT+TGG + chr4.4:7162578-7162597 None:intergenic 15.0%
!!! TTTTCTACTATTTTAATCTA+TGG - chr4.4:7159761-7159780 MS.gene49777:CDS 15.0%
!! AAAAAAAGGAAAAAGGAAAA+AGG + chr4.4:7158995-7159014 None:intergenic 20.0%
!! AAAAAATATTACCAAAAGAG+AGG + chr4.4:7159461-7159480 None:intergenic 20.0%
!! AAATTCAATTTAACACCAAA+AGG + chr4.4:7161088-7161107 None:intergenic 20.0%
!! ACATAAAATAATAGTAACAG+AGG + chr4.4:7160931-7160950 None:intergenic 20.0%
!! AGAAGATTATAAGAAACAAA+GGG + chr4.4:7163569-7163588 None:intergenic 20.0%
!! CATAAAATAATAGTAACAGA+GGG + chr4.4:7160930-7160949 None:intergenic 20.0%
!! TAGAAGATTATAAGAAACAA+AGG + chr4.4:7163570-7163589 None:intergenic 20.0%
!! TATAACTTACTTGAAGAAAA+GGG - chr4.4:7160384-7160403 MS.gene49777:intron 20.0%
!! TATAGAATTCAAACGTTATA+CGG + chr4.4:7157865-7157884 None:intergenic 20.0%
!! TATATTATGTGTATGGATTT+AGG + chr4.4:7161131-7161150 None:intergenic 20.0%
!! TTAATCGTTAGTAAAAGAAA+CGG + chr4.4:7157630-7157649 None:intergenic 20.0%
!! TTACATTGTCAAGATTTAAT+TGG - chr4.4:7161408-7161427 MS.gene49777:intron 20.0%
!!! AAAAAAATGTTAGTTTCCTT+TGG + chr4.4:7161341-7161360 None:intergenic 20.0%
!!! AAAAAATTGTTAGTTTCCTT+TGG + chr4.4:7161203-7161222 None:intergenic 20.0%
!!! AACTTCATCTTTTTTAAGTT+TGG + chr4.4:7160702-7160721 None:intergenic 20.0%
!!! ACTACCATTTTTTTCTTTTT+TGG - chr4.4:7161618-7161637 MS.gene49777:intron 20.0%
!!! ATTTCTTTTCCTTTTCAATT+TGG - chr4.4:7163743-7163762 MS.gene49777:intron 20.0%
!!! GAATAGAAAAAAAAGTTGAT+TGG - chr4.4:7159716-7159735 MS.gene49777:CDS 20.0%
!!! TTCATTACAACTTCTTTTAA+AGG + chr4.4:7159652-7159671 None:intergenic 20.0%
!!! TTTTAACAGATGATGATTAT+AGG - chr4.4:7162703-7162722 MS.gene49777:intron 20.0%
! AAATTGTTAGTTAACTCATG+TGG - chr4.4:7161168-7161187 MS.gene49777:CDS 25.0%
! AACGTTTGAATTCTATAGAT+TGG - chr4.4:7157868-7157887 MS.gene49777:intron 25.0%
! AATATCAAATGCCAAAACAA+GGG - chr4.4:7160598-7160617 MS.gene49777:intron 25.0%
! AATGGAAAAACATCTAAAAG+TGG + chr4.4:7158884-7158903 None:intergenic 25.0%
! AATTCCCAGATATTCAAAAT+AGG - chr4.4:7164220-7164239 MS.gene49777:CDS 25.0%
! ACAAATTATCATTCCATTTG+AGG + chr4.4:7162305-7162324 None:intergenic 25.0%
! AGGAAGCAAATAAATTAAGA+AGG + chr4.4:7162502-7162521 None:intergenic 25.0%
! ATCAATGACATTTCAAAAGA+CGG + chr4.4:7157837-7157856 None:intergenic 25.0%
! ATTATAAGAAACAAAGGGAA+GGG + chr4.4:7163564-7163583 None:intergenic 25.0%
! ATTCATGAATCACAAACATA+AGG + chr4.4:7161595-7161614 None:intergenic 25.0%
! CATTTGAAAAATCAACAAAC+AGG + chr4.4:7163251-7163270 None:intergenic 25.0%
! CATTTGATATTGGAAATCTA+TGG + chr4.4:7160589-7160608 None:intergenic 25.0%
! CCATTTGATGTAAATAACAA+TGG + chr4.4:7159379-7159398 None:intergenic 25.0%
! GAAGGAGATCATAATATAAA+AGG + chr4.4:7163413-7163432 None:intergenic 25.0%
! GGAAGCAAATAAATTAAGAA+GGG + chr4.4:7162501-7162520 None:intergenic 25.0%
! GTATAACTTACTTGAAGAAA+AGG - chr4.4:7160383-7160402 MS.gene49777:intron 25.0%
! TAAATGATGATTTCGTATCA+AGG + chr4.4:7158957-7158976 None:intergenic 25.0%
! TATTCAAAATAGGATGAAGA+AGG - chr4.4:7164230-7164249 MS.gene49777:CDS 25.0%
! TTAATCAGTATTGCAACAAA+AGG - chr4.4:7159336-7159355 MS.gene49777:intron 25.0%
! TTAATGCTTAGAGTTATTGT+TGG - chr4.4:7159545-7159564 MS.gene49777:intron 25.0%
! TTACACAATAAACAAGTGTT+TGG + chr4.4:7160069-7160088 None:intergenic 25.0%
! TTCATGAATCACAAACATAA+GGG + chr4.4:7161594-7161613 None:intergenic 25.0%
! TTGATACGAAATCATCATTT+AGG - chr4.4:7158956-7158975 MS.gene49777:intron 25.0%
!! TTTATTCTTCTGTGCATTTT+AGG - chr4.4:7161976-7161995 MS.gene49777:intron 25.0%
!!! AAGAATGATTTGGTTTCAAT+TGG - chr4.4:7158136-7158155 MS.gene49777:intron 25.0%
!!! ATAATATTTGACTTGGAGAA+AGG - chr4.4:7159961-7159980 MS.gene49777:CDS 25.0%
!!! CCATTGTTATTTACATCAAA+TGG - chr4.4:7159376-7159395 MS.gene49777:CDS 25.0%
!!! TAATATTTGACTTGGAGAAA+GGG - chr4.4:7159962-7159981 MS.gene49777:CDS 25.0%
!!! TCATCCTATTTTGAATATCT+GGG + chr4.4:7164227-7164246 None:intergenic 25.0%
!!! TGGAATTTACTTTTGAATTC+AGG - chr4.4:7159109-7159128 MS.gene49777:intron 25.0%
!!! TTCAAATGATTTTTTTGGTC+TGG - chr4.4:7163263-7163282 MS.gene49777:intron 25.0%
!!! TTCATCCTATTTTGAATATC+TGG + chr4.4:7164228-7164247 None:intergenic 25.0%
!!! TTTGGAATCTTTTTCTTTCT+GGG - chr4.4:7160799-7160818 MS.gene49777:intron 25.0%
!!! TTTGTTTTCACAATTTTGTG+CGG - chr4.4:7159269-7159288 MS.gene49777:intron 25.0%
!!! TTTTGGAATCTTTTTCTTTC+TGG - chr4.4:7160798-7160817 MS.gene49777:intron 25.0%
AAAAAAAAACAGCAGCTTTG+AGG + chr4.4:7162267-7162286 None:intergenic 30.0%
AAACATCAAGTTTCTCCAAT+AGG + chr4.4:7164080-7164099 None:intergenic 30.0%
AAACCAGTGATTGAGAATTT+GGG + chr4.4:7157576-7157595 None:intergenic 30.0%
AAATATTGGTGTGAAGAACA+TGG - chr4.4:7160899-7160918 MS.gene49777:intron 30.0%
AACAAATTCAAGAGTTAGGT+TGG + chr4.4:7161366-7161385 None:intergenic 30.0%
AACCATGATCCTATTTAACA+GGG - chr4.4:7160147-7160166 MS.gene49777:intron 30.0%
AAGATACCAACCTTTCAAAA+TGG + chr4.4:7160627-7160646 None:intergenic 30.0%
AATCAGTGAACAAATGAAAG+AGG + chr4.4:7159824-7159843 None:intergenic 30.0%
AATGTTAGATGGCAATAGTA+AGG - chr4.4:7163184-7163203 MS.gene49777:intron 30.0%
ACATGCTATGTAGTATCAAA+AGG - chr4.4:7161520-7161539 MS.gene49777:CDS 30.0%
ACCTAAAGATGGTAATCTAT+CGG - chr4.4:7163447-7163466 MS.gene49777:intron 30.0%
ACTTGAAGAAAAGGGAAAAT+GGG - chr4.4:7160392-7160411 MS.gene49777:intron 30.0%
AGAAAGGGAAAAAAATATGC+AGG - chr4.4:7159977-7159996 MS.gene49777:CDS 30.0%
AGCAAAAGCTGAAAATAACA+AGG + chr4.4:7162550-7162569 None:intergenic 30.0%
AGTGTGAAAGATGATTTGAA+TGG - chr4.4:7162019-7162038 MS.gene49777:intron 30.0%
AGTTGTATAGAACATGCATT+GGG - chr4.4:7163817-7163836 MS.gene49777:CDS 30.0%
ATCTACTTATTTGTCAGTAG+TGG + chr4.4:7158660-7158679 None:intergenic 30.0%
ATCTCCAATATATCATTGAC+CGG - chr4.4:7163883-7163902 MS.gene49777:intron 30.0%
ATGCTATGTAGTATCAAAAG+GGG - chr4.4:7161522-7161541 MS.gene49777:CDS 30.0%
ATTTATACAACCTCCTCAAT+CGG + chr4.4:7157941-7157960 None:intergenic 30.0%
ATTTGAGGAGCTAATGTTAA+AGG + chr4.4:7162290-7162309 None:intergenic 30.0%
CAATATCAAATGCCAAAACA+AGG - chr4.4:7160597-7160616 MS.gene49777:intron 30.0%
CATAGCATGTTTGAATTGTT+AGG + chr4.4:7161510-7161529 None:intergenic 30.0%
CATGCTATGTAGTATCAAAA+GGG - chr4.4:7161521-7161540 MS.gene49777:CDS 30.0%
GAGTGTTAGAAAGAATGATT+TGG - chr4.4:7158126-7158145 MS.gene49777:intron 30.0%
GATTATAAGAAACAAAGGGA+AGG + chr4.4:7163565-7163584 None:intergenic 30.0%
GCAAAAGCTGAAAATAACAA+GGG + chr4.4:7162549-7162568 None:intergenic 30.0%
GTAGATTGTTAAGATGAGTT+GGG - chr4.4:7158408-7158427 MS.gene49777:intron 30.0%
GTTCTATACAACTGTTAGAA+CGG + chr4.4:7163810-7163829 None:intergenic 30.0%
GTTTCAATGTTATGGAAGTT+AGG + chr4.4:7163325-7163344 None:intergenic 30.0%
TAACAAGCGTTTCAATGTTA+TGG + chr4.4:7163333-7163352 None:intergenic 30.0%
TAACCATGATCCTATTTAAC+AGG - chr4.4:7160146-7160165 MS.gene49777:intron 30.0%
TAATTCGATAGCAATGAAGA+TGG + chr4.4:7158175-7158194 None:intergenic 30.0%
TACTTGAAGAAAAGGGAAAA+TGG - chr4.4:7160391-7160410 MS.gene49777:intron 30.0%
TATACTTGGCCTAATCTATA+GGG + chr4.4:7158632-7158651 None:intergenic 30.0%
TCTACTTATTTGTCAGTAGT+GGG + chr4.4:7158659-7158678 None:intergenic 30.0%
TCTTATTGGATGAATAGAGT+CGG - chr4.4:7162792-7162811 MS.gene49777:intron 30.0%
TCTTCATGTGATTCTCTATT+CGG - chr4.4:7159134-7159153 MS.gene49777:intron 30.0%
TGAAATGTACGTGATAGAAA+TGG + chr4.4:7158902-7158921 None:intergenic 30.0%
TGAACTTTCCTAAATGCTAT+CGG + chr4.4:7162615-7162634 None:intergenic 30.0%
TGTAGATTGTTAAGATGAGT+TGG - chr4.4:7158407-7158426 MS.gene49777:intron 30.0%
TTAACAATCTACACTCTACA+GGG + chr4.4:7158400-7158419 None:intergenic 30.0%
TTATACTTGGCCTAATCTAT+AGG + chr4.4:7158633-7158652 None:intergenic 30.0%
TTATCGCAAAAAGCAGTATT+AGG + chr4.4:7158760-7158779 None:intergenic 30.0%
TTGCAACAAATTCAAGAGTT+AGG + chr4.4:7161370-7161389 None:intergenic 30.0%
TTTAACATTAGCTCCTCAAA+TGG - chr4.4:7162289-7162308 MS.gene49777:intron 30.0%
TTTGTATACCGATAGCATTT+AGG - chr4.4:7162604-7162623 MS.gene49777:CDS 30.0%
! AAATCATCATTTAGGCCTTT+TGG - chr4.4:7158964-7158983 MS.gene49777:intron 30.0%
! ACTTTTTACATTGACACTGT+AGG - chr4.4:7157901-7157920 MS.gene49777:CDS 30.0%
! AGCATGTATACCTTTAGTTT+AGG + chr4.4:7163040-7163059 None:intergenic 30.0%
! ATGTATACCTTTAGTTTAGG+TGG + chr4.4:7163037-7163056 None:intergenic 30.0%
! GAAATCAATTGTTGTTGACT+GGG - chr4.4:7163371-7163390 MS.gene49777:intron 30.0%
! GGCTTTATAAGCAGAATATT+TGG - chr4.4:7164270-7164289 MS.gene49777:CDS 30.0%
! GTAAAATGGCATTTCTGTTT+TGG - chr4.4:7160781-7160800 MS.gene49777:intron 30.0%
! TAACATTTGAAGCTTTCCTA+AGG + chr4.4:7163171-7163190 None:intergenic 30.0%
! TAGGATGTTTGTTGGAAAAT+GGG + chr4.4:7158741-7158760 None:intergenic 30.0%
! TGAAATCAATTGTTGTTGAC+TGG - chr4.4:7163370-7163389 MS.gene49777:intron 30.0%
! TGATCAGAATTGGTTGATTT+CGG + chr4.4:7157546-7157565 None:intergenic 30.0%
! TGATTTGAATGGTCTTGATA+AGG - chr4.4:7162030-7162049 MS.gene49777:intron 30.0%
! TTAGGATGTTTGTTGGAAAA+TGG + chr4.4:7158742-7158761 None:intergenic 30.0%
! TTTAAAGCTAAACTAGAGGT+TGG - chr4.4:7160346-7160365 MS.gene49777:intron 30.0%
! TTTTGTTAAAAGTCCCACAT+TGG - chr4.4:7158559-7158578 MS.gene49777:intron 30.0%
!! AAATCTTTGAAGTTTACCCA+CGG - chr4.4:7157957-7157976 MS.gene49777:CDS 30.0%
!! CCTCTAGTTTAGCTTTAAAA+AGG + chr4.4:7160345-7160364 None:intergenic 30.0%
!!! CCTTTTTAAAGCTAAACTAG+AGG - chr4.4:7160342-7160361 MS.gene49777:intron 30.0%
!!! CTTGTTTTGGCATTTGATAT+TGG + chr4.4:7160599-7160618 None:intergenic 30.0%
!!! TCATTTGTTCACTGATTTTC+AGG - chr4.4:7159827-7159846 MS.gene49777:intron 30.0%
!!! TCCTATGCTATTTTTTTGAG+CGG - chr4.4:7163935-7163954 MS.gene49777:intron 30.0%
!!! TTGTTATTTTCAGCTTTTGC+TGG - chr4.4:7162549-7162568 MS.gene49777:CDS 30.0%
!!! TTTATTTTGCTGATGAAGCA+TGG - chr4.4:7159793-7159812 MS.gene49777:intron 30.0%
AACGAATCTATCTGATTGGT+AGG - chr4.4:7159220-7159239 MS.gene49777:intron 35.0%
AAGAAGGACAAAAGAGCAAA+GGG - chr4.4:7164246-7164265 MS.gene49777:CDS 35.0%
AAGCCAATGAAATTCTGTCA+TGG + chr4.4:7160564-7160583 None:intergenic 35.0%
AAGTAAAATCCACTAGTCCA+GGG + chr4.4:7161029-7161048 None:intergenic 35.0%
ACAAATATTTCTCTGATCCC+TGG - chr4.4:7161009-7161028 MS.gene49777:intron 35.0%
ACCTAAGAAAATGGAATCCA+TGG - chr4.4:7158361-7158380 MS.gene49777:intron 35.0%
ACTACTAAACATTGGCGATA+TGG - chr4.4:7160303-7160322 MS.gene49777:intron 35.0%
AGATACTGCCTTCACAAAAT+TGG - chr4.4:7160256-7160275 MS.gene49777:intron 35.0%
AGCAGTATTAGGATGTTTGT+TGG + chr4.4:7158749-7158768 None:intergenic 35.0%
AGCTAAATAGTAGTAGGCTA+GGG - chr4.4:7158228-7158247 MS.gene49777:intron 35.0%
AGGAAAAAGGACAAACCAAA+AGG + chr4.4:7158982-7159001 None:intergenic 35.0%
AGTATAACCACATCTGTTTC+TGG - chr4.4:7162994-7163013 MS.gene49777:intron 35.0%
AGTCTAATGTCACTGAAGTA+AGG - chr4.4:7158012-7158031 MS.gene49777:intron 35.0%
AGTGACATTAGACTCAGTTA+AGG + chr4.4:7158006-7158025 None:intergenic 35.0%
ATATTACCAAAAGAGAGGAG+TGG + chr4.4:7159456-7159475 None:intergenic 35.0%
ATCATGGTTAAAAACTCGAC+AGG + chr4.4:7160136-7160155 None:intergenic 35.0%
ATGATGATTTCGTATCAAGG+CGG + chr4.4:7158954-7158973 None:intergenic 35.0%
ATGTGTCCTCTTAAGACTTA+CGG - chr4.4:7158198-7158217 MS.gene49777:intron 35.0%
ATTACCATCTTTAGGTCTAC+AGG + chr4.4:7163443-7163462 None:intergenic 35.0%
ATTCGATAGTGTTATACGCA+AGG + chr4.4:7164203-7164222 None:intergenic 35.0%
CAAACCAGTGATTGAGAATT+TGG + chr4.4:7157577-7157596 None:intergenic 35.0%
CAATGTTATGGAAGTTAGGA+TGG + chr4.4:7163321-7163340 None:intergenic 35.0%
CAGTTGTATAGAACATGCAT+TGG - chr4.4:7163816-7163835 MS.gene49777:CDS 35.0%
CATAGTCTGCCAAATTGAAA+AGG + chr4.4:7163755-7163774 None:intergenic 35.0%
CATGTAATGCTCTGTATCAA+AGG + chr4.4:7159621-7159640 None:intergenic 35.0%
CCAATAAGAAATGACACACT+GGG + chr4.4:7162781-7162800 None:intergenic 35.0%
CCTAAAGATGGTAATCTATC+GGG - chr4.4:7163448-7163467 MS.gene49777:intron 35.0%
CCTAAGAAAATGGAATCCAT+GGG - chr4.4:7158362-7158381 MS.gene49777:intron 35.0%
CTATCTGATTTAGTCAGTTC+TGG - chr4.4:7162358-7162377 MS.gene49777:intron 35.0%
CTTAACAATCTACACTCTAC+AGG + chr4.4:7158401-7158420 None:intergenic 35.0%
CTTATATGATCTCTTGCTAC+AGG - chr4.4:7162183-7162202 MS.gene49777:intron 35.0%
CTTATTGGATGAATAGAGTC+GGG - chr4.4:7162793-7162812 MS.gene49777:intron 35.0%
CTTCCATGACAGAATTTCAT+TGG - chr4.4:7160558-7160577 MS.gene49777:intron 35.0%
CTTGGCAGAAAATATTTCAG+CGG - chr4.4:7161803-7161822 MS.gene49777:intron 35.0%
GACTAGAGCTAAATAGTAGT+AGG - chr4.4:7158222-7158241 MS.gene49777:intron 35.0%
GACTATGGTGAAAGAATTAG+AGG - chr4.4:7163768-7163787 MS.gene49777:CDS 35.0%
GATAACTTAGTGTTTGTACC+AGG - chr4.4:7160502-7160521 MS.gene49777:intron 35.0%
GATGTTTCCACCTAAACTAA+AGG - chr4.4:7163027-7163046 MS.gene49777:intron 35.0%
GCAAGTTCACAAACAAAACA+TGG + chr4.4:7162216-7162235 None:intergenic 35.0%
GCAGAGAGAAGATAACTTTA+GGG + chr4.4:7158703-7158722 None:intergenic 35.0%
GGAAAGCTTCAAATGTTAGA+TGG - chr4.4:7163173-7163192 MS.gene49777:intron 35.0%
GTAATCCTATCTGTTTCAGT+TGG - chr4.4:7164047-7164066 MS.gene49777:CDS 35.0%
GTCGGGAATAAATGTTATAG+TGG - chr4.4:7162810-7162829 MS.gene49777:intron 35.0%
GTTAGGGAAATATGGAGATT+TGG - chr4.4:7160183-7160202 MS.gene49777:intron 35.0%
GTTGTATAGAACATGCATTG+GGG - chr4.4:7163818-7163837 MS.gene49777:CDS 35.0%
TAGATTCGTTGAGATGCATT+TGG + chr4.4:7159210-7159229 None:intergenic 35.0%
TAGCAACAAATTCAAGAGCT+AGG + chr4.4:7161230-7161249 None:intergenic 35.0%
TATCTACACATGCTTAACAG+TGG - chr4.4:7159083-7159102 MS.gene49777:intron 35.0%
TATTACCAAAAGAGAGGAGT+GGG + chr4.4:7159455-7159474 None:intergenic 35.0%
TATTATGATCTCCTTCAACC+AGG - chr4.4:7163417-7163436 MS.gene49777:intron 35.0%
TCACGGTAGAATTTATGGAA+AGG - chr4.4:7162750-7162769 MS.gene49777:intron 35.0%
TCAGTTGGAGAAATTCCTAT+TGG - chr4.4:7164062-7164081 MS.gene49777:intron 35.0%
TCATGGTTAAAAACTCGACA+GGG + chr4.4:7160135-7160154 None:intergenic 35.0%
TCCAATAAGAAATGACACAC+TGG + chr4.4:7162782-7162801 None:intergenic 35.0%
TCCATAAATTCTACCGTGAT+GGG + chr4.4:7162749-7162768 None:intergenic 35.0%
TCTAACACTCTTTCCTTCTT+CGG + chr4.4:7158116-7158135 None:intergenic 35.0%
TCTAAGAGTTCAAAGCTGAA+TGG - chr4.4:7158803-7158822 MS.gene49777:intron 35.0%
TCTCAACGAATCTATCTGAT+TGG - chr4.4:7159216-7159235 MS.gene49777:intron 35.0%
TGAAATTGTGTTACCGAAGA+AGG - chr4.4:7158100-7158119 MS.gene49777:intron 35.0%
TGATATATTGGAGATCCCTT+CGG + chr4.4:7163878-7163897 None:intergenic 35.0%
TGCTCTGTATCAGATTATAC+CGG + chr4.4:7159583-7159602 None:intergenic 35.0%
TGTATCAGATTATACCGGAA+AGG + chr4.4:7159578-7159597 None:intergenic 35.0%
TTAAAGTCCAGAAACAGATG+TGG + chr4.4:7163004-7163023 None:intergenic 35.0%
TTCCATAAATTCTACCGTGA+TGG + chr4.4:7162750-7162769 None:intergenic 35.0%
TTGATTTCACACTCAACTTC+AGG + chr4.4:7163359-7163378 None:intergenic 35.0%
TTTATACAACCTCCTCAATC+GGG + chr4.4:7157940-7157959 None:intergenic 35.0%
TTTCTCCAACTGAAACAGAT+AGG + chr4.4:7164055-7164074 None:intergenic 35.0%
! AAGTTTTTCTCTCCTCTCAT+AGG - chr4.4:7162915-7162934 MS.gene49777:intron 35.0%
! AGAGAAGATAACTTTAGGGA+GGG + chr4.4:7158699-7158718 None:intergenic 35.0%
! AGAGTGTTCATGCAAAAGTT+TGG - chr4.4:7162417-7162436 MS.gene49777:intron 35.0%
! AGTTTTTCTCTCCTCTCATA+GGG - chr4.4:7162916-7162935 MS.gene49777:intron 35.0%
! ATGACAGAATTTCATTGGCT+TGG - chr4.4:7160563-7160582 MS.gene49777:intron 35.0%
! CTGAATAATTTTATCAGCCC+AGG - chr4.4:7161755-7161774 MS.gene49777:intron 35.0%
! CTTTTCAATTTGGCAGACTA+TGG - chr4.4:7163753-7163772 MS.gene49777:intron 35.0%
! GCTGAAATATTTTCTGCCAA+GGG + chr4.4:7161804-7161823 None:intergenic 35.0%
! TTGTTGGATTTGTTCCTTTC+CGG - chr4.4:7159561-7159580 MS.gene49777:intron 35.0%
! TTTGGTTTCAATTGGCTGTT+AGG - chr4.4:7158144-7158163 MS.gene49777:intron 35.0%
! TTTTACATTGACACTGTAGG+AGG - chr4.4:7157904-7157923 MS.gene49777:CDS 35.0%
!! AGTGGATTTTACTTCTGACT+TGG - chr4.4:7161035-7161054 MS.gene49777:intron 35.0%
!! GCTTTAAAAAGGTCTAATGC+AGG + chr4.4:7160334-7160353 None:intergenic 35.0%
!! TAAAGCACTTCAAAAGTGCT+AGG - chr4.4:7159913-7159932 MS.gene49777:CDS 35.0%
!! TAACACCAAAAGGAGCATTA+TGG + chr4.4:7161078-7161097 None:intergenic 35.0%
!! TGATTTAGTCAGTTCTGGAA+GGG - chr4.4:7162363-7162382 MS.gene49777:intron 35.0%
!!! AGAAATGCCATTTTACAGCA+TGG + chr4.4:7160777-7160796 None:intergenic 35.0%
!!! CCTATGCTATTTTTTTGAGC+GGG - chr4.4:7163936-7163955 MS.gene49777:intron 35.0%
!!! GAAATGCCATTTTACAGCAT+GGG + chr4.4:7160776-7160795 None:intergenic 35.0%
AAAATGGAATCCATGGGAAG+CGG - chr4.4:7158368-7158387 MS.gene49777:intron 40.0%
AAATCAGCACAAATGCAGCA+TGG - chr4.4:7157735-7157754 MS.gene49777:intron 40.0%
AAGAGTTCAAAGCTGAATGG+TGG - chr4.4:7158806-7158825 MS.gene49777:intron 40.0%
AATCGTGGCACCTAAGAAAA+TGG - chr4.4:7158352-7158371 MS.gene49777:intron 40.0%
ACGTGTATGTAACCACCTAA+TGG - chr4.4:7160741-7160760 MS.gene49777:intron 40.0%
ACTCAAGAGAATATCTCCGA+AGG - chr4.4:7163859-7163878 MS.gene49777:intron 40.0%
AGAGAATCAATCATCTGCCA+TGG - chr4.4:7157509-7157528 MS.gene49777:CDS 40.0%
AGCATTATGGATGTCAACCT+AGG + chr4.4:7161065-7161084 None:intergenic 40.0%
AGCCCTGTTAAATAGGATCA+TGG + chr4.4:7160152-7160171 None:intergenic 40.0%
AGCTCCGGTCAATGATATAT+TGG + chr4.4:7163890-7163909 None:intergenic 40.0%
AGTATGTAAAGCTCCCATCA+CGG - chr4.4:7162733-7162752 MS.gene49777:intron 40.0%
AGTTTAGCTGAAGATGCCTT+AGG - chr4.4:7163152-7163171 MS.gene49777:intron 40.0%
ATCAAAAGGGGAATTGTTGC+TGG - chr4.4:7161534-7161553 MS.gene49777:CDS 40.0%
ATCTGCTGAACATAACTCGT+TGG - chr4.4:7160964-7160983 MS.gene49777:intron 40.0%
ATGATGCTAGAGGCTGTATT+CGG - chr4.4:7161868-7161887 MS.gene49777:CDS 40.0%
ATTGCAAAGCACACGTTTGT+GGG + chr4.4:7158262-7158281 None:intergenic 40.0%
ATTTAACAGGGCTGTATACG+AGG - chr4.4:7160159-7160178 MS.gene49777:intron 40.0%
CAACAAACTCCCCTTCATAT+AGG + chr4.4:7159862-7159881 None:intergenic 40.0%
CACATGCTTAACAGTGGAAT+TGG - chr4.4:7159089-7159108 MS.gene49777:intron 40.0%
CATGCTTATGACTTATGTGC+AGG - chr4.4:7163054-7163073 MS.gene49777:intron 40.0%
CCCGATAGATTACCATCTTT+AGG + chr4.4:7163451-7163470 None:intergenic 40.0%
CCCGCTCAAAAAAATAGCAT+AGG + chr4.4:7163939-7163958 None:intergenic 40.0%
CGTATACAGCCCTGTTAAAT+AGG + chr4.4:7160159-7160178 None:intergenic 40.0%
CTAAACATTGGCGATATGGA+AGG - chr4.4:7160307-7160326 MS.gene49777:intron 40.0%
CTCAAGAGAATATCTCCGAA+GGG - chr4.4:7163860-7163879 MS.gene49777:intron 40.0%
CTCGTTGGGGTAATATAGTT+TGG - chr4.4:7160979-7160998 MS.gene49777:intron 40.0%
CTTACGAGTCCTATATGAAG+GGG - chr4.4:7159850-7159869 MS.gene49777:intron 40.0%
GAAGAAGGACAAAAGAGCAA+AGG - chr4.4:7164245-7164264 MS.gene49777:CDS 40.0%
GAAGTAAAATCCACTAGTCC+AGG + chr4.4:7161030-7161049 None:intergenic 40.0%
GACTGGGAGGAACTAAATAA+AGG - chr4.4:7163387-7163406 MS.gene49777:intron 40.0%
GAGCTAAATAGTAGTAGGCT+AGG - chr4.4:7158227-7158246 MS.gene49777:intron 40.0%
GATGTTTATGAGTCTGCTGT+GGG - chr4.4:7164093-7164112 MS.gene49777:intron 40.0%
GCATTATGGATGTCAACCTA+GGG + chr4.4:7161064-7161083 None:intergenic 40.0%
GCCAATGTTTAGTAGTTCAG+AGG + chr4.4:7160299-7160318 None:intergenic 40.0%
GCCTCTGAACTACTAAACAT+TGG - chr4.4:7160295-7160314 MS.gene49777:intron 40.0%
GCTTACGAGTCCTATATGAA+GGG - chr4.4:7159849-7159868 MS.gene49777:intron 40.0%
GGCAGAGAGAAGATAACTTT+AGG + chr4.4:7158704-7158723 None:intergenic 40.0%
GGGAACAATCTGATCAGAAT+TGG + chr4.4:7157556-7157575 None:intergenic 40.0%
GTTCCCAAATTCTCAATCAC+TGG - chr4.4:7157570-7157589 MS.gene49777:CDS 40.0%
GTTTGAGCAAGATCAGAACT+GGG - chr4.4:7159881-7159900 MS.gene49777:intron 40.0%
TACGAGGAGTTAGGGAAATA+TGG - chr4.4:7160175-7160194 MS.gene49777:intron 40.0%
TAGTCACCGTAAGTCTTAAG+AGG + chr4.4:7158207-7158226 None:intergenic 40.0%
TATAAGCGAACAAGCTCTTC+AGG + chr4.4:7162169-7162188 None:intergenic 40.0%
TATTTCAGCGGACAAAAGAC+TGG - chr4.4:7161815-7161834 MS.gene49777:intron 40.0%
TCAGCAAAGCTAACTTCTTC+TGG + chr4.4:7162397-7162416 None:intergenic 40.0%
TCATGTGATTCTCTATTCGG+CGG - chr4.4:7159137-7159156 MS.gene49777:intron 40.0%
TCCCATCACGGTAGAATTTA+TGG - chr4.4:7162745-7162764 MS.gene49777:intron 40.0%
TCTGCTGAACATAACTCGTT+GGG - chr4.4:7160965-7160984 MS.gene49777:intron 40.0%
TCTTGCTTTCGCAAACATCA+AGG + chr4.4:7162893-7162912 None:intergenic 40.0%
TGAAGGCAGTATCTGATACT+AGG + chr4.4:7160250-7160269 None:intergenic 40.0%
TGAGATGCATTTGGTCCATT+TGG + chr4.4:7159201-7159220 None:intergenic 40.0%
TGATGATTTCGTATCAAGGC+GGG + chr4.4:7158953-7158972 None:intergenic 40.0%
TGATGGGAGCTTTACATACT+AGG + chr4.4:7162733-7162752 None:intergenic 40.0%
TGATGTTTATGAGTCTGCTG+TGG - chr4.4:7164092-7164111 MS.gene49777:intron 40.0%
TGCATCAGAAAAGAGAGATG+CGG + chr4.4:7158051-7158070 None:intergenic 40.0%
TGGAAAATGGGTAAAGAGTG+TGG + chr4.4:7158729-7158748 None:intergenic 40.0%
TGTTGCAAAGTCATACAGTG+TGG - chr4.4:7163085-7163104 MS.gene49777:intron 40.0%
TGTTTGAGCAAGATCAGAAC+TGG - chr4.4:7159880-7159899 MS.gene49777:intron 40.0%
! ATCAATTGTTGTTGACTGGG+AGG - chr4.4:7163374-7163393 MS.gene49777:intron 40.0%
! CCCATGGATTCCATTTTCTT+AGG + chr4.4:7158365-7158384 None:intergenic 40.0%
! CGCTGAAATATTTTCTGCCA+AGG + chr4.4:7161805-7161824 None:intergenic 40.0%
! CTTTTGCCCATGCTGTAAAA+TGG - chr4.4:7160767-7160786 MS.gene49777:intron 40.0%
! GACATCCATAATGCTCCTTT+TGG - chr4.4:7161070-7161089 MS.gene49777:intron 40.0%
! GAGAGAAGATAACTTTAGGG+AGG + chr4.4:7158700-7158719 None:intergenic 40.0%
! GTATTGCAACAAAAGGCATG+TGG - chr4.4:7159343-7159362 MS.gene49777:CDS 40.0%
! GTATTTTCGCTGTTGCTAAC+TGG - chr4.4:7157792-7157811 MS.gene49777:intron 40.0%
! TATTTCCCACTCCTCTCTTT+TGG - chr4.4:7159447-7159466 MS.gene49777:intron 40.0%
! TTCACAATTTTGTGCGGTCA+AGG - chr4.4:7159275-7159294 MS.gene49777:intron 40.0%
!! ATAGGCGCTGATATCATAGT+AGG + chr4.4:7158447-7158466 None:intergenic 40.0%
!! CAAAATGGCAACCCTTGTTT+TGG + chr4.4:7160612-7160631 None:intergenic 40.0%
!! CCCAGTGTGTCATTTCTTAT+TGG - chr4.4:7162778-7162797 MS.gene49777:intron 40.0%
!! CTGATTTAGTCAGTTCTGGA+AGG - chr4.4:7162362-7162381 MS.gene49777:intron 40.0%
!! GAAGGGATATCTCTAAGATC+AGG + chr4.4:7162484-7162503 None:intergenic 40.0%
!! GATACAGAGCATTGCATGTT+AGG - chr4.4:7159592-7159611 MS.gene49777:intron 40.0%
!! TATTCGGGCTGATTTGGTAT+TGG - chr4.4:7161884-7161903 MS.gene49777:CDS 40.0%
!! TGTGCAGACTCTAAAGTTGT+TGG + chr4.4:7163516-7163535 None:intergenic 40.0%
!! TTGACTGGCCAATTTTGTGA+AGG + chr4.4:7160267-7160286 None:intergenic 40.0%
!!! ACAAGGGTTGCCATTTTGAA+AGG - chr4.4:7160614-7160633 MS.gene49777:intron 40.0%
!!! AGCTAACTTCTTCTGGCTTT+TGG + chr4.4:7162390-7162409 None:intergenic 40.0%
!!! CAGTAGTGGGCTTTTATACT+TGG + chr4.4:7158646-7158665 None:intergenic 40.0%
!!! TTTTTGCGATAAGCACTGGT+AGG - chr4.4:7158768-7158787 MS.gene49777:intron 40.0%
AAGATCTCCTCTGATCTGTC+AGG + chr4.4:7163474-7163493 None:intergenic 45.0%
AAGGACAAAAGAGCAAAGGG+TGG - chr4.4:7164249-7164268 MS.gene49777:CDS 45.0%
ACGGAGATTACACTCGCTAT+CGG - chr4.4:7157766-7157785 MS.gene49777:intron 45.0%
ACTTTCTGCATTTCCTGCAG+TGG + chr4.4:7162002-7162021 None:intergenic 45.0%
AGAACATGCATTGGGGATCA+TGG - chr4.4:7163825-7163844 MS.gene49777:CDS 45.0%
ATACAGTGTGGCTGGAAAGA+GGG - chr4.4:7163097-7163116 MS.gene49777:intron 45.0%
CAACAAAAGGTTGCGCTCAA+TGG + chr4.4:7162083-7162102 None:intergenic 45.0%
CAGAGGCTTGTAGATTTGAC+TGG + chr4.4:7160282-7160301 None:intergenic 45.0%
CAGCATACAAACACATCGTC+AGG + chr4.4:7158596-7158615 None:intergenic 45.0%
CAGTCCTCACCCTATAGATT+AGG - chr4.4:7158620-7158639 MS.gene49777:CDS 45.0%
CATGCATGTGCAGTGCAATT+AGG + chr4.4:7162522-7162541 None:intergenic 45.0%
CATGGGCAAAAGAGACCATT+AGG + chr4.4:7160759-7160778 None:intergenic 45.0%
CTGCTGAACATAACTCGTTG+GGG - chr4.4:7160966-7160985 MS.gene49777:intron 45.0%
GAATACAGCCTCTAGCATCA+TGG + chr4.4:7161869-7161888 None:intergenic 45.0%
GACGATGTGTTTGTATGCTG+TGG - chr4.4:7158596-7158615 MS.gene49777:CDS 45.0%
GAGAAAAGGCAGCTTCCAAA+TGG - chr4.4:7159183-7159202 MS.gene49777:intron 45.0%
GAGCTGGAGAAAGATATCCA+TGG - chr4.4:7161777-7161796 MS.gene49777:intron 45.0%
GATATCTTTCTCCAGCTCCT+GGG + chr4.4:7161775-7161794 None:intergenic 45.0%
GATTGCAAAGCACACGTTTG+TGG + chr4.4:7158263-7158282 None:intergenic 45.0%
GCGACAGTTATAAGCATGAG+TGG - chr4.4:7158308-7158327 MS.gene49777:intron 45.0%
GGCTTACGAGTCCTATATGA+AGG - chr4.4:7159848-7159867 MS.gene49777:intron 45.0%
GTTACATACACGTGAGGCAA+AGG + chr4.4:7160734-7160753 None:intergenic 45.0%
GTTCACAGTCCATGTAATCG+TGG - chr4.4:7158337-7158356 MS.gene49777:intron 45.0%
TAGGTGGTTACATACACGTG+AGG + chr4.4:7160740-7160759 None:intergenic 45.0%
TCTGCATACCATGATGCTAG+AGG - chr4.4:7161858-7161877 MS.gene49777:intron 45.0%
TGATGCTAGAGGCTGTATTC+GGG - chr4.4:7161869-7161888 MS.gene49777:CDS 45.0%
TGCAGGAACAAGCTTATGCT+TGG - chr4.4:7159994-7160013 MS.gene49777:CDS 45.0%
TGCTATCAGCTCACCACTAT+CGG - chr4.4:7158487-7158506 MS.gene49777:intron 45.0%
TGCTCAATTGCCCTTTCCTA+GGG + chr4.4:7162943-7162962 None:intergenic 45.0%
TGGTCCAATGGATCTTGGAT+AGG + chr4.4:7158465-7158484 None:intergenic 45.0%
TTGCAACCCTGACCAACAAA+AGG + chr4.4:7162096-7162115 None:intergenic 45.0%
TTGGCCTAATCTATAGGGTG+AGG + chr4.4:7158627-7158646 None:intergenic 45.0%
! AAATGGGTAAAGAGTGTGGC+AGG + chr4.4:7158725-7158744 None:intergenic 45.0%
! AACAAAAGGCATGTGGCAAC+TGG - chr4.4:7159350-7159369 MS.gene49777:CDS 45.0%
! AATTTTATCAGCCCAGGAGC+TGG - chr4.4:7161761-7161780 MS.gene49777:intron 45.0%
! AGGTCTTGTCTCATCCAATG+TGG + chr4.4:7158576-7158595 None:intergenic 45.0%
! CATTGAGCGCAACCTTTTGT+TGG - chr4.4:7162081-7162100 MS.gene49777:intron 45.0%
! GGTCTTGTCTCATCCAATGT+GGG + chr4.4:7158575-7158594 None:intergenic 45.0%
! TAGGACATCTTTGGAAGCTG+AGG - chr4.4:7159305-7159324 MS.gene49777:intron 45.0%
! TCTTAGGTGCCACGATTACA+TGG + chr4.4:7158349-7158368 None:intergenic 45.0%
! TGCACAGTGTTTTCGCGATA+TGG - chr4.4:7163530-7163549 MS.gene49777:intron 45.0%
!! ACCAAGTTTTGTGTCGTGAG+CGG - chr4.4:7160209-7160228 MS.gene49777:intron 45.0%
!! ACTTCTGACTTGGATACCCT+AGG - chr4.4:7161045-7161064 MS.gene49777:intron 45.0%
!! GGCAGATTCTAGGACATCTT+TGG - chr4.4:7159296-7159315 MS.gene49777:intron 45.0%
!! TTTCGGATCATCGACTTCCA+TGG + chr4.4:7157529-7157548 None:intergenic 45.0%
!!! CTGCTTTTTGCGATAAGCAC+TGG - chr4.4:7158764-7158783 MS.gene49777:intron 45.0%
!!! GGGTTGCCATTTTGAAAGGT+TGG - chr4.4:7160618-7160637 MS.gene49777:intron 45.0%
!!! GTTTGGCTTTTCGAGCAGAA+AGG - chr4.4:7162434-7162453 MS.gene49777:intron 45.0%
!! TAATAATATATTTCTTAATA+TGG - chr4.4:7161283-7161302 MS.gene49777:intron 5.0%
AAGGCTGTCAGTGCTGTCTT+AGG - chr4.4:7162049-7162068 MS.gene49777:intron 50.0%
AAGGGCAATTGAGCAGTAGG+TGG - chr4.4:7162948-7162967 MS.gene49777:intron 50.0%
ACACGCCTGATGTGAAGTCT+TGG - chr4.4:7158522-7158541 MS.gene49777:intron 50.0%
ACATGCATTGGGGATCATGG+AGG - chr4.4:7163828-7163847 MS.gene49777:CDS 50.0%
AGCGCCTATCCAAGATCCAT+TGG - chr4.4:7158458-7158477 MS.gene49777:intron 50.0%
AGGCTGTATTCGGGCTGATT+TGG - chr4.4:7161878-7161897 MS.gene49777:CDS 50.0%
AGGGCTGTATACGAGGAGTT+AGG - chr4.4:7160166-7160185 MS.gene49777:intron 50.0%
ATTATGTACCCGCTCAGCTC+CGG + chr4.4:7163905-7163924 None:intergenic 50.0%
ATTGTACAGCCCGATTGAGG+AGG - chr4.4:7157928-7157947 MS.gene49777:CDS 50.0%
CACGCCTGATGTGAAGTCTT+GGG - chr4.4:7158523-7158542 MS.gene49777:intron 50.0%
CAGGCCTGTAGACCTAAAGA+TGG - chr4.4:7163436-7163455 MS.gene49777:intron 50.0%
CATACAGTGTGGCTGGAAAG+AGG - chr4.4:7163096-7163115 MS.gene49777:intron 50.0%
CATCTTTAGGTCTACAGGCC+TGG + chr4.4:7163438-7163457 None:intergenic 50.0%
CATGCCCAAGACTTCACATC+AGG + chr4.4:7158530-7158549 None:intergenic 50.0%
CATGTCGATGTCAGAGCCAA+AGG - chr4.4:7161322-7161341 MS.gene49777:intron 50.0%
CATGTGGATGTCAGAGCCAA+AGG - chr4.4:7161184-7161203 MS.gene49777:CDS 50.0%
CTGCTCAATTGCCCTTTCCT+AGG + chr4.4:7162944-7162963 None:intergenic 50.0%
GAGCAGAAAGGTTGTCTTGC+TGG - chr4.4:7162446-7162465 MS.gene49777:intron 50.0%
GATGTGAAGTCTTGGGCATG+AGG - chr4.4:7158530-7158549 MS.gene49777:intron 50.0%
GATGTGGTTATACTGCCAGC+AGG + chr4.4:7162988-7163007 None:intergenic 50.0%
GCAAAGTCATACAGTGTGGC+TGG - chr4.4:7163089-7163108 MS.gene49777:intron 50.0%
GCAAGATCAGAACTGGGATG+TGG - chr4.4:7159887-7159906 MS.gene49777:intron 50.0%
GCAGTAGGTGGTGATTACTG+TGG - chr4.4:7162960-7162979 MS.gene49777:intron 50.0%
GCTATCAGCTCACCACTATC+GGG - chr4.4:7158488-7158507 MS.gene49777:intron 50.0%
GCTCAATTGCCCTTTCCTAG+GGG + chr4.4:7162942-7162961 None:intergenic 50.0%
GGAAAGGGCAATTGAGCAGT+AGG - chr4.4:7162945-7162964 MS.gene49777:intron 50.0%
GGAGTCATGCCATGGAGAAA+AGG - chr4.4:7159169-7159188 MS.gene49777:intron 50.0%
GGATATCTTTCTCCAGCTCC+TGG + chr4.4:7161776-7161795 None:intergenic 50.0%
GGGCAAAAGAGACCATTAGG+TGG + chr4.4:7160756-7160775 None:intergenic 50.0%
GGGCTGTATACGAGGAGTTA+GGG - chr4.4:7160167-7160186 MS.gene49777:intron 50.0%
GGTATTGTACAGCCCGATTG+AGG - chr4.4:7157925-7157944 MS.gene49777:CDS 50.0%
GTTGCGCAAGGCAGTAAAGT+GGG - chr4.4:7159242-7159261 MS.gene49777:intron 50.0%
TACGCAAGGTCCAGCACAAT+CGG + chr4.4:7164189-7164208 None:intergenic 50.0%
TATCATTGACCGGAGCTGAG+CGG - chr4.4:7163893-7163912 MS.gene49777:intron 50.0%
TCGCTGTTGCTAACTGGATG+CGG - chr4.4:7157798-7157817 MS.gene49777:intron 50.0%
TCTGATTGGTAGGTTGCGCA+AGG - chr4.4:7159230-7159249 MS.gene49777:intron 50.0%
TTGAAGTTTACCCACGGTCG+TGG - chr4.4:7157963-7157982 MS.gene49777:CDS 50.0%
TTGAGATCTTGCCTCAGCCA+TGG + chr4.4:7160531-7160550 None:intergenic 50.0%
! AGCGCAACCTTTTGTTGGTC+AGG - chr4.4:7162086-7162105 MS.gene49777:intron 50.0%
! ATGCAGCATGGTTTGCGTCA+CGG - chr4.4:7157747-7157766 MS.gene49777:intron 50.0%
! CTTTAGGGAGGGTGATAGAC+AGG + chr4.4:7158688-7158707 None:intergenic 50.0%
! GATAGTGGTGAGCTGATAGC+AGG + chr4.4:7158488-7158507 None:intergenic 50.0%
! GCGAACAAGCTCTTCAGGTT+TGG + chr4.4:7162164-7162183 None:intergenic 50.0%
! GCGCAACCTTTTGTTGGTCA+GGG - chr4.4:7162087-7162106 MS.gene49777:intron 50.0%
! TGGAAGCTGCCTTTTCTCCA+TGG + chr4.4:7159181-7159200 None:intergenic 50.0%
! TGTGCATTTTAGGCCACTGC+AGG - chr4.4:7161986-7162005 MS.gene49777:intron 50.0%
! TTCTCTGATCCCTGGACTAG+TGG - chr4.4:7161017-7161036 MS.gene49777:intron 50.0%
!! CCAAGTTTTGTGTCGTGAGC+GGG - chr4.4:7160210-7160229 MS.gene49777:intron 50.0%
ACACGTGAGGCAAAGGTGAG+AGG + chr4.4:7160727-7160746 None:intergenic 55.0%
ACGCAAGGTCCAGCACAATC+GGG + chr4.4:7164188-7164207 None:intergenic 55.0%
AGGTCTACAGGCCTGGTTGA+AGG + chr4.4:7163431-7163450 None:intergenic 55.0%
AGTGGCTCAAGAGCGAGAAC+AGG + chr4.4:7158866-7158885 None:intergenic 55.0%
AGTGGTGAGCTGATAGCAGG+TGG + chr4.4:7158485-7158504 None:intergenic 55.0%
ATCATTGACCGGAGCTGAGC+GGG - chr4.4:7163894-7163913 MS.gene49777:intron 55.0%
CAATTGCCTGGAAAGCTGGG+GGG + chr4.4:7164158-7164177 None:intergenic 55.0%
CCCGCTCACGACACAAAACT+TGG + chr4.4:7160213-7160232 None:intergenic 55.0%
CGTATACTTGCCACGACCGT+GGG + chr4.4:7157976-7157995 None:intergenic 55.0%
CTCATAGGGCCCCTAGGAAA+GGG - chr4.4:7162930-7162949 MS.gene49777:intron 55.0%
GAGAGCTTGGAGTCATGCCA+TGG - chr4.4:7159161-7159180 MS.gene49777:intron 55.0%
GCAATTGCCTGGAAAGCTGG+GGG + chr4.4:7164159-7164178 None:intergenic 55.0%
GCAGGTGGTCCAATGGATCT+TGG + chr4.4:7158470-7158489 None:intergenic 55.0%
GCTGATAGCAGGTGGTCCAA+TGG + chr4.4:7158477-7158496 None:intergenic 55.0%
GGCAATTGCCTGGAAAGCTG+GGG + chr4.4:7164160-7164179 None:intergenic 55.0%
GGGCAATTGCCTGGAAAGCT+GGG + chr4.4:7164161-7164180 None:intergenic 55.0%
GGTCCAGCACAATCGGGTTA+CGG + chr4.4:7164182-7164201 None:intergenic 55.0%
GGTTGCGCAAGGCAGTAAAG+TGG - chr4.4:7159241-7159260 MS.gene49777:intron 55.0%
GTCCAGCACAATCGGGTTAC+GGG + chr4.4:7164181-7164200 None:intergenic 55.0%
GTGATTACTGTGGTGCCTGC+TGG - chr4.4:7162970-7162989 MS.gene49777:intron 55.0%
GTGCGGTCAAGGCAGATTCT+AGG - chr4.4:7159286-7159305 MS.gene49777:intron 55.0%
GTGGCTCAAGAGCGAGAACA+GGG + chr4.4:7158865-7158884 None:intergenic 55.0%
GTGTTTGTACCAGGCTGCCA+TGG - chr4.4:7160511-7160530 MS.gene49777:intron 55.0%
TATCGGGCCTGACAGATCAG+AGG - chr4.4:7163464-7163483 MS.gene49777:intron 55.0%
TCGTATACTTGCCACGACCG+TGG + chr4.4:7157977-7157996 None:intergenic 55.0%
TCTATTCGGCGGAGAGAGCT+TGG - chr4.4:7159148-7159167 MS.gene49777:intron 55.0%
TCTCATAGGGCCCCTAGGAA+AGG - chr4.4:7162929-7162948 MS.gene49777:intron 55.0%
TGGGGATCATGGAGGAGAAG+AGG - chr4.4:7163836-7163855 MS.gene49777:CDS 55.0%
TTTCCTAGGGGCCCTATGAG+AGG + chr4.4:7162930-7162949 None:intergenic 55.0%
!! TTTGTGTCGTGAGCGGGTTG+AGG - chr4.4:7160216-7160235 MS.gene49777:intron 55.0%
AGGGATCAGACCGCTTCCCA+TGG + chr4.4:7158381-7158400 None:intergenic 60.0%
CGGGCAATTGCCTGGAAAGC+TGG + chr4.4:7164162-7164181 None:intergenic 60.0%
CTCACCACTATCGGGCGACT+CGG - chr4.4:7158496-7158515 MS.gene49777:intron 60.0%
GGGAGGGTGATAGACAGGAG+TGG + chr4.4:7158683-7158702 None:intergenic 60.0%
TCACCACTATCGGGCGACTC+GGG - chr4.4:7158497-7158516 MS.gene49777:intron 60.0%
TCGGGTTACGGGCAATTGCC+TGG + chr4.4:7164170-7164189 None:intergenic 60.0%
TCTCCTCTCATAGGGCCCCT+AGG - chr4.4:7162924-7162943 MS.gene49777:intron 60.0%
TGCCCGTAACCCGATTGTGC+TGG - chr4.4:7164176-7164195 MS.gene49777:intron 60.0%
CTGGGGGGAAGGGAGCAATG+CGG + chr4.4:7164143-7164162 None:intergenic 65.0%
GCCTGGAAAGCTGGGGGGAA+GGG + chr4.4:7164153-7164172 None:intergenic 65.0%
GTACCAGGCTGCCATGGCTG+AGG - chr4.4:7160517-7160536 MS.gene49777:intron 65.0%
TCCCTTCCCCCCAGCTTTCC+AGG - chr4.4:7164149-7164168 MS.gene49777:intron 65.0%
TGACCCGAGTCGCCCGATAG+TGG + chr4.4:7158503-7158522 None:intergenic 65.0%
TGCCTGGAAAGCTGGGGGGA+AGG + chr4.4:7164154-7164173 None:intergenic 65.0%
TGGGGGGAAGGGAGCAATGC+GGG + chr4.4:7164142-7164161 None:intergenic 65.0%
TTGCCTCAGCCATGGCAGCC+TGG + chr4.4:7160523-7160542 None:intergenic 65.0%
GGGGGGAAGGGAGCAATGCG+GGG + chr4.4:7164141-7164160 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 7157501 7164296 7157501 ID=MS.gene49777
chr4.4 mRNA 7157501 7164296 7157501 ID=MS.gene49777.t1;Parent=MS.gene49777
chr4.4 exon 7164206 7164296 7164206 ID=MS.gene49777.t1.exon1;Parent=MS.gene49777.t1
chr4.4 CDS 7164206 7164296 7164206 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7164010 7164076 7164010 ID=MS.gene49777.t1.exon2;Parent=MS.gene49777.t1
chr4.4 CDS 7164010 7164076 7164010 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7163764 7163874 7163764 ID=MS.gene49777.t1.exon3;Parent=MS.gene49777.t1
chr4.4 CDS 7163764 7163874 7163764 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7162471 7162666 7162471 ID=MS.gene49777.t1.exon4;Parent=MS.gene49777.t1
chr4.4 CDS 7162471 7162666 7162471 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7161863 7161948 7161863 ID=MS.gene49777.t1.exon5;Parent=MS.gene49777.t1
chr4.4 CDS 7161863 7161948 7161863 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7161434 7161629 7161434 ID=MS.gene49777.t1.exon6;Parent=MS.gene49777.t1
chr4.4 CDS 7161434 7161629 7161434 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7161162 7161273 7161162 ID=MS.gene49777.t1.exon7;Parent=MS.gene49777.t1
chr4.4 CDS 7161162 7161273 7161162 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7159898 7160025 7159898 ID=MS.gene49777.t1.exon8;Parent=MS.gene49777.t1
chr4.4 CDS 7159898 7160025 7159898 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7159593 7159799 7159593 ID=MS.gene49777.t1.exon9;Parent=MS.gene49777.t1
chr4.4 CDS 7159593 7159799 7159593 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7159342 7159451 7159342 ID=MS.gene49777.t1.exon10;Parent=MS.gene49777.t1
chr4.4 CDS 7159342 7159451 7159342 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7158592 7158721 7158592 ID=MS.gene49777.t1.exon11;Parent=MS.gene49777.t1
chr4.4 CDS 7158592 7158721 7158592 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7157882 7158028 7157882 ID=MS.gene49777.t1.exon12;Parent=MS.gene49777.t1
chr4.4 CDS 7157882 7158028 7157882 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
chr4.4 exon 7157501 7157731 7157501 ID=MS.gene49777.t1.exon13;Parent=MS.gene49777.t1
chr4.4 CDS 7157501 7157731 7157501 ID=cds.MS.gene49777.t1;Parent=MS.gene49777.t1
Gene Sequence

>MS.gene49777

ATGGGAAAAGAGAATCAATCATCTGCCATGGAAGTCGATGATCCGAAATCAACCAATTCTGATCAGATTGTTCCCAAATTCTCAATCACTGGTTTGTGTCTTCTCGTTATTTCTACAAATACAATGCCGTTTCTTTTACTAACGATTAAGAAATGCATTATTCAGTAACTAAACTTTTATGATTGATGTAATTTAACATTTTAATTTTAAAATTTTACAGTTCTGCAGCTGTTAAAATCAGCACAAATGCAGCATGGTTTGCGTCACGGAGATTACACTCGCTATCGGTATGTATTTTCGCTGTTGCTAACTGGATGCGGACATATTTTATTACCGTCTTTTGAAATGTCATTGATTTAAGCCGTATAACGTTTGAATTCTATAGATTGGTAATAAATGCACTTTTTACATTGACACTGTAGGAGGTATTGTACAGCCCGATTGAGGAGGTTGTATAAATCTTTGAAGTTTACCCACGGTCGTGGCAAGTATACGAAAAGAACCTTAACTGAGTCTAATGTCACTGAAGTAAGGTATGCTTTGTTTACCGCATCTCTCTTTTCTGATGCAAGTTCTCGAATTTTTGTAGTGCATTAGCTTGAAATTGTGTTACCGAAGAAGGAAAGAGTGTTAGAAAGAATGATTTGGTTTCAATTGGCTGTTAGGCTTTACCATCTTCATTGCTATCGAATTACATATGTGTCCTCTTAAGACTTACGGTGACTAGAGCTAAATAGTAGTAGGCTAGGGCTAAAGATCCCACAAACGTGTGCTTTGCAATCTCTAGAAATCGAAGCACTTGAGACAGCGACAGTTATAAGCATGAGTGGCATTACGTTCACAGTCCATGTAATCGTGGCACCTAAGAAAATGGAATCCATGGGAAGCGGTCTGATCCCTGTAGAGTGTAGATTGTTAAGATGAGTTGGGCTCAATATAAAAACCTACTATGATATCAGCGCCTATCCAAGATCCATTGGACCACCTGCTATCAGCTCACCACTATCGGGCGACTCGGGTCACACGCCTGATGTGAAGTCTTGGGCATGAGGTGTATGTTTTGTTAAAAGTCCCACATTGGATGAGACAAGACCTGACGATGTGTTTGTATGCTGTGGACAGTCCTCACCCTATAGATTAGGCCAAGTATAAAAGCCCACTACTGACAAATAAGTAGATCCACTCCTGTCTATCACCCTCCCTAAAGTTATCTTCTCTCTGCCTGCCACACTCTTTACCCATTTTCCAACAAACATCCTAATACTGCTTTTTGCGATAAGCACTGGTAGGCAAAGTTTTCTGTCTAAGAGTTCAAAGCTGAATGGTGGTTGTTAAATCTTTTATTTGTCGAGTTATAATTTCCCTGTTCTCGCTCTTGAGCCACTTTTAGATGTTTTTCCATTTCTATCACGTACATTTCATGCATATCATTATCTAAATCTGAAATCTCCCGCCTTGATACGAAATCATCATTTAGGCCTTTTGGTTTGTCCTTTTTCCTTTTTCCTTTTTTTTAAAAATGTTTTACTATATTTGTGAATTAAAAAAATAAACTTTTCATTTTTCTGGCAACTTTTCAAATTATCTACACATGCTTAACAGTGGAATTGGAATTTACTTTTGAATTCAGGTTTCTTCATGTGATTCTCTATTCGGCGGAGAGAGCTTGGAGTCATGCCATGGAGAAAAGGCAGCTTCCAAATGGACCAAATGCATCTCAACGAATCTATCTGATTGGTAGGTTGCGCAAGGCAGTAAAGTGGGCTACTTTGTTTTCACAATTTTGTGCGGTCAAGGCAGATTCTAGGACATCTTTGGAAGCTGAGGTGAGTCTTTTAATCAGTATTGCAACAAAAGGCATGTGGCAACTGGCAACCATTGTTATTTACATCAAATGGTTTATTGTTAATATAATGCAGTATTTATTCTTTCTCTTTTTTGCATTTTATTTCCCACTCCTCTCTTTTGGTAATATTTTTTTTCACTTATCGACGATCAATTAGTTCTTTTAATATACAGAATAAAATATTTTTATTTGTTATTTTTAATGCTTAGAGTTATTGTTGGATTTGTTCCTTTCCGGTATAATCTGATACAGAGCATTGCATGTTAGGAAACCTTTGATACAGAGCATTACATGTTACAAAACCTTTAAAAGAAGTTGTAATGAATTAATTAATATATAACAAAGTTGAAAATATGTTGCATCACATTAGAATAGAAAAAAAAGTTGATTGGTTTTACTTTTGATAATTTACCCTTTTCTACTATTTTAATCTATGGCAGAAAATGTTTATTTTGCTGATGAAGCATGGAAATGCCTCTTTCATTTGTTCACTGATTTTCAGGCTTACGAGTCCTATATGAAGGGGAGTTTGTTGTTTGAGCAAGATCAGAACTGGGATGTGGCTTTAAAGCACTTCAAAAGTGCTAGGTACATATACTATGTCTCCTTGATTTATAATATTTGACTTGGAGAAAGGGAAAAAAATATGCAGGAACAAGCTTATGCTTGGTTGAATGAGATCTTTATGTAAAGAAGAATTCAAATCTTTGCTTTCTGTGCCAAACACTTGTTTATTGTGTAATCTTGCACATCAGCTTTTGTGATGTTTCTGTTATTTTCACTCACCCTGTCGAGTTTTTAACCATGATCCTATTTAACAGGGCTGTATACGAGGAGTTAGGGAAATATGGAGATTTGGATAACCAAGTTTTGTGTCGTGAGCGGGTTGAGGAACTAGAACCTAGTATCAGATACTGCCTTCACAAAATTGGCCAGTCAAATCTACAAGCCTCTGAACTACTAAACATTGGCGATATGGAAGGACCTGCATTAGACCTTTTTAAAGCTAAACTAGAGGTTGGTACAGATTTCATTTGTATAACTTACTTGAAGAAAAGGGAAAATGGGTTTTGTGATATGCACATATTTTTGAATCAGTATATTCAAATGTTCTCTTATGCGAACATGTTGAATCAATTGCTTGTTATTTTGAAAGATAACTTAGTGTTTGTACCAGGCTGCCATGGCTGAGGCAAGATCTCAACAAGCTGCTTCCATGACAGAATTTCATTGGCTTGGCCATAGATTTCCAATATCAAATGCCAAAACAAGGGTTGCCATTTTGAAAGGTTGGTATCTTCTCATAAAACTTAGACAGCTATTAAATTGAAAAAAAAAAGGTTATCTATTGACCAAACTTAAAAAAGATGAAGTTAACCTCTCACCTTTGCCTCACGTGTATGTAACCACCTAATGGTCTCTTTTGCCCATGCTGTAAAATGGCATTTCTGTTTTGGAATCTTTTTCTTTCTGGGTTTTCTTAAATGAGTATGCTGTGACAAATCAATCGCAAATTACAGACAAACTCTTTCTGATATTAAATATATGCTAAAAATATTGGTGTGAAGAACATGGTGTGTCCCTCTGTTACTATTATTTTATGTAGATCTGTAGTATATCTGCTGAACATAACTCGTTGGGGTAATATAGTTTGGCTGATGAACAAATATTTCTCTGATCCCTGGACTAGTGGATTTTACTTCTGACTTGGATACCCTAGGTTGACATCCATAATGCTCCTTTTGGTGTTAAATTGAATTTTACTTCGTAAATGCAAAAAGCCTAAATCCATACACATAATATATTTGTTAATGTGGTGTGAAATTGTTAGTTAACTCATGTGGATGTCAGAGCCAAAGGAAACTAACAATTTTTTACAACCTAGCTCTTGAATTTGTTGCTATCGATTTTTCTCTGTTTCAATTTTTTTACAAACTAATAATATATTTCTTAATATGGTGTTAAATTGTTAACTCATGTCGATGTCAGAGCCAAAGGAAACTAACATTTTTTTTTCCAACCTAACTCTTGAATTTGTTGCAATCGATTTTTCTCTTCAATTTACATTGTCAAGATTTAATTGGAAGTGAAATTTCTTATAACAGTTGTATACAGTATTTTTATTATTTATTTTTTAAAAAATTGTTTCAAGAAAGTACACCTAACAATTCAAACATGCTATGTAGTATCAAAAGGGGAATTGTTGCTGGAGCAGACATTTTATTTGTACATGCAAAATATAATCCCTTATGTTTGTGATTCATGAATCATACTACCATTTTTTTCTTTTTTGGATTTTTTTTCTTATAATTGTACTTGTTTGTGTGATTTAGCATGTTTTTACTTGCAGCGACTTTTCTTTTTAATATAGTTCATCTCTGTTTAGCTATATGCAGTAATGTTTCTATCTGAATAATTTTATCAGCCCAGGAGCTGGAGAAAGATATCCATGGTCCCTTGGCAGAAAATATTTCAGCGGACAAAAGACTGGTTATTTTTGACAAAATCTTTTCTGCATACCATGATGCTAGAGGCTGTATTCGGGCTGATTTGGTATTGGAAATTACTTGAATTTTCGCTGTTAATTGTGAATCAATAACAACATTTTTACTTGTTAAGCTGATCTATTTTTATTCTTCTGTGCATTTTAGGCCACTGCAGGAAATGCAGAAAGTGTGAAAGATGATTTGAATGGTCTTGATAAGGCTGTCAGTGCTGTCTTAGGAGAAAGAACCATTGAGCGCAACCTTTTGTTGGTCAGGGTTGCAAAAAGTAAACTTGCAAAGCGTAATGATGATAAAAATGAAAAACTCACCAAACCTGAAGAGCTTGTTCGCTTATATGATCTCTTGCTACAGGTTGATATCCATGTTTTGTTTGTGAACTTGCATTATTGAACACATTTCTGTGTAAAGATCCTCAAAGCTGCTGTTTTTTTTTCCTTTAACATTAGCTCCTCAAATGGAATGATAATTTGTATGTATAATAATATTTTGCAGAATACATCTGATCTATCTGATTTAGTCAGTTCTGGAAGGGACCAAAAGCCAGAAGAAGTTAGCTTTGCTGAAGAGTGTTCATGCAAAAGTTTGGCTTTTCGAGCAGAAAGGTTGTCTTGCTGGAGCAATTTTTTTCCTGATCTTAGAGATATCCCTTCTTAATTTATTTGCTTCCTAATTGCACTGCACATGCATGCTTACCCTTGTTATTTTCAGCTTTTGCTGGAAACCAAATTTTTAACTTCTGTAAAATTAAAATTTGTATACCGATAGCATTTAGGAAAGTTCATCATAACATGTCATAGATATTTAACGACAGTTTGTGTTCTCCCATCTTTAGAGTTTTTTATTTATATCTTTTAACAGATGATGATTATAGGACAACCTAGTATGTAAAGCTCCCATCACGGTAGAATTTATGGAAAGGTCAAACCCAGTGTGTCATTTCTTATTGGATGAATAGAGTCGGGAATAAATGTTATAGTGGTTTACTTATCACTTAGCTCTAACATATGCAAATATTATCTTTATTGTTTTGTTAATGCCTTGATGTTTGCGAAAGCAAGATTAAGTTTTTCTCTCCTCTCATAGGGCCCCTAGGAAAGGGCAATTGAGCAGTAGGTGGTGATTACTGTGGTGCCTGCTGGCAGTATAACCACATCTGTTTCTGGACTTTAAAGAGATGTTTCCACCTAAACTAAAGGTATACATGCTTATGACTTATGTGCAGGTGCTTTTATGTTGCAAAGTCATACAGTGTGGCTGGAAAGAGGGCTGAAGCATATGCTTTGTACTGTCGTGCTCGCAGTTTAGCTGAAGATGCCTTAGGAAAGCTTCAAATGTTAGATGGCAATAGTAAGGTAATTTTAGTTATTTTTTAAGATCAAATGGCAGTATTAATTCCTGTTTGTTGATTTTTCAAATGATTTTTTTGGTCTGGTATGTGCACTGAAATGTGCTTCGCTTCACTTTCCATCCTAACTTCCATAACATTGAAACGCTTGTTAGATCCTGAAGTTGAGTGTGAAATCAATTGTTGTTGACTGGGAGGAACTAAATAAAGGCCTTTTATATTATGATCTCCTTCAACCAGGCCTGTAGACCTAAAGATGGTAATCTATCGGGCCTGACAGATCAGAGGAGATCTTTGTACATTCAAATTTCACACCAACAACTTTAGAGTCTGCACAGTGTTTTCGCGATATGGAAGTTTATCCCTTCCCTTTGTTTCTTATAATCTTCTAAATTTAGAATATGATTGAAACCTTCTAAATTTAGAATATGATTGAAACTTTTGTTGAATAAATGATAATTGTTTTAGATTTATATTTATTAATTTTTATATGAAAGCTCGTATTTGATTTTATTGCTATTGATTGTATTTTCTTCTGATTTTTATTTCTTTTCCTTTTCAATTTGGCAGACTATGGTGAAAGAATTAGAGGTCTTGTGCAATGAATGCCGTTCTAACAGTTGTATAGAACATGCATTGGGGATCATGGAGGAGAAGAGGACTCAAGAGAATATCTCCGAAGGGATCTCCAATATATCATTGACCGGAGCTGAGCGGGTACATAATTTTCTATTTCTCCTATGCTATTTTTTTGAGCGGGAAGTTGCGACTTTTTTACTCTTGAATCTGTCTTGCATCTGTAGACAATAATAGCATCTGCATGAACATTTATTGATATATTCTGACATGTAATCCTATCTGTTTCAGTTGGAGAAATTCCTATTGGAGAAACTTGATGTTTATGAGTCTGCTGTGGGTGATTCAAACGTGAAATCTGCACCCCGCATTGCTCCCTTCCCCCCAGCTTTCCAGGCAATTGCCCGTAACCCGATTGTGCTGGACCTTGCGTATAACACTATCGAATTCCCAGATATTCAAAATAGGATGAAGAAGGACAAAAGAGCAAAGGGTGGCTTTATAAGCAGAATATTTGGATGA

Protein sequence

>MS.gene49777.t1

MGKENQSSAMEVDDPKSTNSDQIVPKFSITVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYTKRTLTESNVTEVRFLHVILYSAERAWSHAMEKRQLPNGPNASQRIYLIGRLRKAVKWATLFSQFCAVKADSRTSLEAEAYESYMKGSLLFEQDQNWDVALKHFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQASELLNIGDMEGPALDLFKAKLEAAMAEARSQQAASMTEFHWLGHRFPISNAKTRVAILKAQELEKDIHGPLAENISADKRLVIFDKIFSAYHDARGCIRADLATAGNAESVKDDLNGLDKAVSAVLGERTIERNLLLVRVAKSKLAKRNDDKNEKLTKPEELVRLYDLLLQNTSDLSDLVSSGRDQKPEEVSFAEECSCKSLAFRAERCFYVAKSYSVAGKRAEAYALYCRARSLAEDALGKLQMLDGNSKTMVKELEVLCNECRSNSCIEHALGIMEEKRTQENISEGISNISLTGAERLEKFLLEKLDVYESAVGDSNVKSAPRIAPFPPAFQAIARNPIVLDLAYNTIEFPDIQNRMKKDKRAKGGFISRIFG