Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75884.t1 | XP_003595491.1 | 90.7 | 666 | 54 | 2 | 1 | 664 | 1 | 660 | 4.20E-277 | 963.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75884.t1 | Q3UHX0 | 33.0 | 100 | 61 | 1 | 5 | 98 | 2 | 101 | 3.2e-07 | 58.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75884.t1 | A2Q361 | 90.7 | 666 | 54 | 2 | 1 | 664 | 1 | 660 | 3.0e-277 | 963.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049166 | MS.gene75884 | 0.862281 | 5.66E-64 | -1.69E-46 |
MS.gene049887 | MS.gene75884 | 0.811919 | 5.50E-51 | -1.69E-46 |
MS.gene050084 | MS.gene75884 | 0.827213 | 1.77E-54 | -1.69E-46 |
MS.gene050085 | MS.gene75884 | 0.850285 | 1.87E-60 | -1.69E-46 |
MS.gene050114 | MS.gene75884 | 0.830782 | 2.42E-55 | -1.69E-46 |
MS.gene050277 | MS.gene75884 | 0.831222 | 1.89E-55 | -1.69E-46 |
MS.gene050317 | MS.gene75884 | 0.831386 | 1.72E-55 | -1.69E-46 |
MS.gene050689 | MS.gene75884 | 0.832461 | 9.33E-56 | -1.69E-46 |
MS.gene050838 | MS.gene75884 | 0.8487 | 5.19E-60 | -1.69E-46 |
MS.gene050992 | MS.gene75884 | 0.82468 | 7.08E-54 | -1.69E-46 |
MS.gene051003 | MS.gene75884 | 0.82538 | 4.84E-54 | -1.69E-46 |
MS.gene051233 | MS.gene75884 | 0.802103 | 6.57E-49 | -1.69E-46 |
MS.gene051245 | MS.gene75884 | 0.839337 | 1.68E-57 | -1.69E-46 |
MS.gene051748 | MS.gene75884 | 0.801386 | 9.23E-49 | -1.69E-46 |
MS.gene051850 | MS.gene75884 | 0.830048 | 3.66E-55 | -1.69E-46 |
MS.gene05188 | MS.gene75884 | 0.807357 | 5.26E-50 | -1.69E-46 |
MS.gene052342 | MS.gene75884 | 0.811838 | 5.73E-51 | -1.69E-46 |
MS.gene052397 | MS.gene75884 | 0.838006 | 3.71E-57 | -1.69E-46 |
MS.gene052434 | MS.gene75884 | 0.822334 | 2.50E-53 | -1.69E-46 |
MS.gene053058 | MS.gene75884 | 0.843986 | 1.00E-58 | -1.69E-46 |
MS.gene053109 | MS.gene75884 | 0.837435 | 5.21E-57 | -1.69E-46 |
MS.gene053381 | MS.gene75884 | 0.836286 | 1.02E-56 | -1.69E-46 |
MS.gene054823 | MS.gene75884 | 0.81317 | 2.93E-51 | -1.69E-46 |
MS.gene055424 | MS.gene75884 | 0.83835 | 3.03E-57 | -1.69E-46 |
MS.gene055441 | MS.gene75884 | 0.803555 | 3.30E-49 | -1.69E-46 |
MS.gene056097 | MS.gene75884 | 0.841329 | 5.08E-58 | -1.69E-46 |
MS.gene056181 | MS.gene75884 | 0.840639 | 7.70E-58 | -1.69E-46 |
MS.gene056403 | MS.gene75884 | 0.811328 | 7.40E-51 | -1.69E-46 |
MS.gene056432 | MS.gene75884 | 0.851546 | 8.27E-61 | -1.69E-46 |
MS.gene056580 | MS.gene75884 | 0.811183 | 7.95E-51 | -1.69E-46 |
MS.gene056605 | MS.gene75884 | 0.806167 | 9.38E-50 | -1.69E-46 |
MS.gene056752 | MS.gene75884 | 0.814847 | 1.25E-51 | -1.69E-46 |
MS.gene057057 | MS.gene75884 | 0.82237 | 2.46E-53 | -1.69E-46 |
MS.gene057094 | MS.gene75884 | 0.838157 | 3.40E-57 | -1.69E-46 |
MS.gene057140 | MS.gene75884 | 0.828478 | 8.79E-55 | -1.69E-46 |
MS.gene057234 | MS.gene75884 | 0.831459 | 1.65E-55 | -1.69E-46 |
MS.gene05781 | MS.gene75884 | 0.803947 | 2.73E-49 | -1.69E-46 |
MS.gene058054 | MS.gene75884 | 0.825839 | 3.77E-54 | -1.69E-46 |
MS.gene058055 | MS.gene75884 | 0.836565 | 8.68E-57 | -1.69E-46 |
MS.gene058126 | MS.gene75884 | 0.800619 | 1.32E-48 | -1.69E-46 |
MS.gene058238 | MS.gene75884 | 0.820999 | 5.10E-53 | -1.69E-46 |
MS.gene058646 | MS.gene75884 | 0.826054 | 3.35E-54 | -1.69E-46 |
MS.gene058654 | MS.gene75884 | 0.829059 | 6.36E-55 | -1.69E-46 |
MS.gene058906 | MS.gene75884 | 0.800882 | 1.17E-48 | -1.69E-46 |
MS.gene059146 | MS.gene75884 | 0.803763 | 2.99E-49 | -1.69E-46 |
MS.gene059171 | MS.gene75884 | 0.800274 | 1.56E-48 | -1.69E-46 |
MS.gene05978 | MS.gene75884 | 0.825856 | 3.73E-54 | -1.69E-46 |
MS.gene06001 | MS.gene75884 | 0.806254 | 8.99E-50 | -1.69E-46 |
MS.gene06010 | MS.gene75884 | 0.811895 | 5.57E-51 | -1.69E-46 |
MS.gene06011 | MS.gene75884 | 0.815439 | 9.24E-52 | -1.69E-46 |
MS.gene060296 | MS.gene75884 | 0.821715 | 3.48E-53 | -1.69E-46 |
MS.gene060465 | MS.gene75884 | 0.804836 | 1.78E-49 | -1.69E-46 |
MS.gene060763 | MS.gene75884 | 0.850821 | 1.33E-60 | -1.69E-46 |
MS.gene061055 | MS.gene75884 | 0.803693 | 3.09E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75884.t1 | MTR_2g048340 | 94.144 | 666 | 31 | 2 | 1 | 664 | 1 | 660 | 0.0 | 1238 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75884.t1 | AT5G58130 | 49.356 | 233 | 88 | 5 | 3 | 233 | 2 | 206 | 6.64e-61 | 217 |
Find 141 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATGATCCTTTCAAGTTCT+TGG | 0.115429 | 2.1:+43353783 | None:intergenic |
ACTGAACCAGAACATGATTT+TGG | 0.178047 | 2.1:-43352942 | MS.gene75884:CDS |
GGTTCTTTAGCCGTTTGTTC+TGG | 0.189946 | 2.1:+43352384 | None:intergenic |
GAGGACCAACTTTAATATTC+TGG | 0.211960 | 2.1:+43354167 | None:intergenic |
TTCAGTTATCACTTGTTTAT+TGG | 0.243733 | 2.1:+43352548 | None:intergenic |
AGAATATTCGTCGGAGGATT+AGG | 0.284833 | 2.1:-43357126 | MS.gene75884:CDS |
TCGAAAACTGTTCGAATCAT+TGG | 0.286085 | 2.1:-43357079 | MS.gene75884:CDS |
ATTGCTTTCACTTTCCGATT+TGG | 0.294913 | 2.1:+43353043 | None:intergenic |
CATGATCCTTTCAAGTTCTT+GGG | 0.298802 | 2.1:+43353784 | None:intergenic |
TTGCTTTCACTTTCCGATTT+GGG | 0.304504 | 2.1:+43353044 | None:intergenic |
TTCGACTCATAAGGAGGATT+TGG | 0.331025 | 2.1:-43355990 | MS.gene75884:CDS |
CGATCTGCAAATGTTGAAAT+AGG | 0.332142 | 2.1:-43352174 | MS.gene75884:CDS |
ATGTTGGCATTGCAGTATAA+TGG | 0.333790 | 2.1:-43356133 | MS.gene75884:intron |
GTCACGGATGGCTTCAACTT+AGG | 0.337028 | 2.1:-43352291 | MS.gene75884:CDS |
GGAACCGGCAGGGTACAAAA+TGG | 0.340357 | 2.1:+43352362 | None:intergenic |
TGGTACCTTACTGAAAAGTT+TGG | 0.345165 | 2.1:+43356972 | None:intergenic |
TAACGAACCGTTCTTAATCT+TGG | 0.345426 | 2.1:+43355902 | None:intergenic |
CTTCTAGATGGGCTGGGATC+TGG | 0.347707 | 2.1:-43352975 | MS.gene75884:CDS |
CATGGTGGCAAAAGAAATCT+TGG | 0.355436 | 2.1:-43352473 | MS.gene75884:CDS |
TCTACAAAGCGTCTTGCATT+AGG | 0.359623 | 2.1:+43355956 | None:intergenic |
TCGAATGTCATCGGTGGTTA+CGG | 0.365656 | 2.1:+43357098 | None:intergenic |
GGGAGTCTGCCAAAGTTTCA+TGG | 0.367925 | 2.1:-43352920 | MS.gene75884:CDS |
AAAAGCTGTGAAAGGCTAAA+TGG | 0.376894 | 2.1:+43352423 | None:intergenic |
ACGATCAAGGTAATGCTCTT+TGG | 0.378575 | 2.1:+43356072 | None:intergenic |
CAGATCCCAGCCCATCTAGA+AGG | 0.381344 | 2.1:+43352976 | None:intergenic |
ATGAGTGGGGAAGCAGAAAT+TGG | 0.383018 | 2.1:-43354043 | MS.gene75884:CDS |
CTCTTCTATCACTCTTGTAT+TGG | 0.388942 | 2.1:+43352632 | None:intergenic |
ATATTGAGAGGCTTTGCATC+TGG | 0.390081 | 2.1:+43355932 | None:intergenic |
AAAGCTAAAGCTGCTGTTAG+TGG | 0.395152 | 2.1:-43352102 | MS.gene75884:CDS |
TGTTATTCTCATTAGCCAAC+TGG | 0.398795 | 2.1:+43352448 | None:intergenic |
TTCTTTGATCATTTGTGTAT+TGG | 0.401907 | 2.1:+43352674 | None:intergenic |
AGGATAAGTTATCTATGAAT+GGG | 0.402189 | 2.1:-43354090 | MS.gene75884:CDS |
GTTCTTTAGCCGTTTGTTCT+GGG | 0.404623 | 2.1:+43352385 | None:intergenic |
AAAATGCAGACCCTTCTAGA+TGG | 0.405551 | 2.1:-43352987 | MS.gene75884:CDS |
GTTTCTAACACCAAGCATCT+TGG | 0.410072 | 2.1:-43353953 | MS.gene75884:CDS |
GAGAAAATCACTTCCCAAAT+CGG | 0.411171 | 2.1:-43353057 | MS.gene75884:CDS |
TCACGGATGGCTTCAACTTA+GGG | 0.412683 | 2.1:-43352290 | MS.gene75884:CDS |
TCCATACCCTTCAGTGGAAC+TGG | 0.413684 | 2.1:-43354208 | MS.gene75884:CDS |
GACTCCCCAAAATCATGTTC+TGG | 0.414624 | 2.1:+43352936 | None:intergenic |
AAGGATAAGTTATCTATGAA+TGG | 0.419930 | 2.1:-43354091 | MS.gene75884:CDS |
AACGAACCGTTCTTAATCTT+GGG | 0.421343 | 2.1:+43355903 | None:intergenic |
CGAAAACTGTTCGAATCATT+GGG | 0.426176 | 2.1:-43357078 | MS.gene75884:CDS |
AAACGCAGTGAGAAGAAGTA+AGG | 0.432186 | 2.1:-43352066 | None:intergenic |
TGTTGGCATTGCAGTATAAT+GGG | 0.433137 | 2.1:-43356132 | MS.gene75884:intron |
GTTATCACTTGTTTATTGGT+AGG | 0.438837 | 2.1:+43352552 | None:intergenic |
TCCAGTGAGTGCAAGCATAA+TGG | 0.439320 | 2.1:-43352342 | MS.gene75884:CDS |
TCTATCACTCTTGTATTGGT+AGG | 0.441895 | 2.1:+43352636 | None:intergenic |
CTTCTGAGACCATGAAACTT+TGG | 0.442387 | 2.1:+43352911 | None:intergenic |
GCAGACCCTTCTAGATGGGC+TGG | 0.447267 | 2.1:-43352982 | MS.gene75884:CDS |
ATGCTTGCACTCACTGGAAC+CGG | 0.452300 | 2.1:+43352347 | None:intergenic |
AATCGGAAAGTGAAAGCAAT+GGG | 0.455057 | 2.1:-43353040 | MS.gene75884:CDS |
TTCTTCTATCACCTGTGCAT+TGG | 0.455540 | 2.1:+43352590 | None:intergenic |
TGAAAGGATCATGGAAAGTC+AGG | 0.458480 | 2.1:-43353774 | MS.gene75884:intron |
GTAAGCGAGACTGCGACCTT+TGG | 0.460541 | 2.1:+43357026 | None:intergenic |
GCTGATAAGAATACTATTGA+TGG | 0.461820 | 2.1:-43352318 | MS.gene75884:CDS |
TTCTGATGTTTCGACTCATA+AGG | 0.462618 | 2.1:-43355999 | MS.gene75884:CDS |
TAACTGGCACAGGTGTTTCA+TGG | 0.468662 | 2.1:-43352491 | MS.gene75884:CDS |
CTTACTGAAAAGTTTGGAAA+GGG | 0.474134 | 2.1:+43356978 | None:intergenic |
TTGGTAGGTTGAGCTTCAGC+AGG | 0.477986 | 2.1:+43352567 | None:intergenic |
ACCATTATGCTTGCACTCAC+TGG | 0.478496 | 2.1:+43352341 | None:intergenic |
GTGCTTCTTTCCAAGATGCT+TGG | 0.478695 | 2.1:+43353943 | None:intergenic |
ACATTTGCAGATCGTTCCCT+TGG | 0.482594 | 2.1:+43352183 | None:intergenic |
CCAGCATGCTCACTATGTTC+TGG | 0.483255 | 2.1:+43352258 | None:intergenic |
TGTATTGGTAGGTTGAGATT+CGG | 0.494596 | 2.1:+43352689 | None:intergenic |
AAGTTATGCTGAGTTTCAGC+AGG | 0.496289 | 2.1:+43352525 | None:intergenic |
TAGAATCAGCAAGGAAATCA+AGG | 0.497334 | 2.1:+43357004 | None:intergenic |
TATGAATGGGGAAACTGAAA+GGG | 0.498569 | 2.1:-43354077 | MS.gene75884:CDS |
CTATGAATGGGGAAACTGAA+AGG | 0.499445 | 2.1:-43354078 | MS.gene75884:CDS |
CATTAGTTTCCCAGAACAAA+CGG | 0.500069 | 2.1:-43352394 | MS.gene75884:CDS |
AGTTTCATCGTTTGTAGAAG+AGG | 0.502622 | 2.1:+43352773 | None:intergenic |
TGGAGAGAACTTGTTGGTAA+AGG | 0.503479 | 2.1:-43352882 | MS.gene75884:CDS |
TAAAACAAATATTGCGGAGG+AGG | 0.509192 | 2.1:-43353132 | MS.gene75884:CDS |
ACCAGTTCCACTGAAGGGTA+TGG | 0.509579 | 2.1:+43354207 | None:intergenic |
GAACCGGCAGGGTACAAAAT+GGG | 0.513709 | 2.1:+43352363 | None:intergenic |
TTGATCATTTGTGTATTGGT+AGG | 0.513749 | 2.1:+43352678 | None:intergenic |
TCTATCACCTGTGCATTGGT+AGG | 0.514259 | 2.1:+43352594 | None:intergenic |
GTGCTGATTCTTTGAAAGAG+TGG | 0.514505 | 2.1:-43352128 | MS.gene75884:CDS |
AGTTTCCAGAATATTAAAGT+TGG | 0.515602 | 2.1:-43354172 | MS.gene75884:CDS |
CCAAGAACTTGAAAGGATCA+TGG | 0.517434 | 2.1:-43353783 | MS.gene75884:CDS |
AATGGGTGTGTGTGGAAAGG+TGG | 0.524128 | 2.1:-43356115 | MS.gene75884:CDS |
TGGAAAGCTGAAACTTGAAA+AGG | 0.537493 | 2.1:-43356095 | MS.gene75884:CDS |
CAGACCCTTCTAGATGGGCT+GGG | 0.539526 | 2.1:-43352981 | MS.gene75884:CDS |
TCTTCGTGGAGAGAACTTGT+TGG | 0.539823 | 2.1:-43352888 | MS.gene75884:CDS |
TTGCACTCACTGGAACCGGC+AGG | 0.540369 | 2.1:+43352351 | None:intergenic |
TGCTTACCAGTTCCACTGAA+GGG | 0.542059 | 2.1:+43354202 | None:intergenic |
GGGAAAAGTTATCTATGAGT+GGG | 0.542933 | 2.1:-43354057 | MS.gene75884:CDS |
AAATCATGTTCTGGTTCAGT+AGG | 0.544746 | 2.1:+43352945 | None:intergenic |
TCATAAGGAGGATTTGGTAA+AGG | 0.545638 | 2.1:-43355984 | MS.gene75884:CDS |
ACTGCGACCTTTGGTACGAA+TGG | 0.551310 | 2.1:+43357035 | None:intergenic |
CCTTACTGAAAAGTTTGGAA+AGG | 0.551504 | 2.1:+43356977 | None:intergenic |
CATGGTCTCAGAAGTCTTCG+TGG | 0.551938 | 2.1:-43352902 | MS.gene75884:CDS |
ATCTCTGCCTACCAATGCAC+AGG | 0.554099 | 2.1:-43352601 | MS.gene75884:CDS |
TGTTCTGGGAAACTAATGTC+AGG | 0.556549 | 2.1:+43352399 | None:intergenic |
AGTGGGGAAGCAGAAATTGG+TGG | 0.558375 | 2.1:-43354040 | MS.gene75884:CDS |
TTGGTAGGTTGAGATTCGGC+AGG | 0.560339 | 2.1:+43352693 | None:intergenic |
GAAGATCAGCAAAACTCTCA+TGG | 0.564997 | 2.1:-43352807 | MS.gene75884:CDS |
CAGGGACCCAAGAACTTGAA+AGG | 0.565422 | 2.1:-43353790 | MS.gene75884:CDS |
GTGCTTACCAGTTCCACTGA+AGG | 0.566725 | 2.1:+43354201 | None:intergenic |
AAATGCAGACCCTTCTAGAT+GGG | 0.570793 | 2.1:-43352986 | MS.gene75884:CDS |
GTTATTCTCATTAGCCAACT+GGG | 0.572106 | 2.1:+43352449 | None:intergenic |
AAATCGTTGAAACAAGTCCA+AGG | 0.574551 | 2.1:-43352200 | MS.gene75884:CDS |
AACGCAGTGAGAAGAAGTAA+GGG | 0.581748 | 2.1:-43352065 | None:intergenic |
CTTGGGAAGTAAATATTGAG+AGG | 0.582694 | 2.1:+43355920 | None:intergenic |
TGAGTCGAAACATCAGAAGC+TGG | 0.586957 | 2.1:+43356004 | None:intergenic |
TACTATTGATGGAACTGTCA+CGG | 0.590070 | 2.1:-43352307 | MS.gene75884:CDS |
AGGGAAAAGTTATCTATGAG+TGG | 0.590439 | 2.1:-43354058 | MS.gene75884:CDS |
TGCAGTATAATGGGTGTGTG+TGG | 0.590559 | 2.1:-43356123 | MS.gene75884:intron |
TGCACTCACTGGAACCGGCA+GGG | 0.590957 | 2.1:+43352352 | None:intergenic |
TTACTTCCCAAGATTAAGAA+CGG | 0.593171 | 2.1:-43355909 | MS.gene75884:intron |
AAACGATGAAACTGAAGACA+TGG | 0.593297 | 2.1:-43352763 | MS.gene75884:CDS |
CTCGAAACCATTCGTACCAA+AGG | 0.593811 | 2.1:-43357042 | MS.gene75884:CDS |
AGATCCCAGCCCATCTAGAA+GGG | 0.593994 | 2.1:+43352977 | None:intergenic |
AAAGAAATCTTGGACCCAGT+TGG | 0.595933 | 2.1:-43352463 | MS.gene75884:CDS |
GTCCAATAAAACAAATATTG+CGG | 0.596702 | 2.1:-43353138 | MS.gene75884:CDS |
TGTCAGGCAAAAGCTGTGAA+AGG | 0.600136 | 2.1:+43352415 | None:intergenic |
TGGAGCAGAAACTATATCAT+CGG | 0.601162 | 2.1:+43352233 | None:intergenic |
TTGGTAGGCAGAGATTCAGC+AGG | 0.605263 | 2.1:+43352609 | None:intergenic |
AGAGAACTTGTTGGTAAAGG+AGG | 0.605841 | 2.1:-43352879 | MS.gene75884:CDS |
GAGCAAGAGCGATTCTAGCA+AGG | 0.611834 | 2.1:-43353087 | MS.gene75884:CDS |
CACGGATGGCTTCAACTTAG+GGG | 0.616972 | 2.1:-43352289 | MS.gene75884:CDS |
AGAGCAGTGAGAATATTCGT+CGG | 0.618455 | 2.1:-43357135 | MS.gene75884:CDS |
AAATCGGAAAGTGAAAGCAA+TGG | 0.618747 | 2.1:-43353041 | MS.gene75884:CDS |
GTAGATAGTGCAACAGATGA+TGG | 0.626664 | 2.1:-43353875 | MS.gene75884:CDS |
GGATAAGTTATCTATGAATG+GGG | 0.627287 | 2.1:-43354089 | MS.gene75884:CDS |
ATTGATGGAACTGTCACGGA+TGG | 0.628129 | 2.1:-43352303 | MS.gene75884:CDS |
TGATGTTTCGACTCATAAGG+AGG | 0.628597 | 2.1:-43355996 | MS.gene75884:CDS |
TCTTCAGCAGTATCAAACTT+CGG | 0.628677 | 2.1:+43352825 | None:intergenic |
AAAGGGATTTAGAATCAGCA+AGG | 0.632981 | 2.1:+43356995 | None:intergenic |
AAAACAAAGCAGCTTTGACA+GGG | 0.636062 | 2.1:-43353808 | MS.gene75884:CDS |
AATCGTTGAAACAAGTCCAA+GGG | 0.636458 | 2.1:-43352199 | MS.gene75884:CDS |
TATAATGGGTGTGTGTGGAA+AGG | 0.637628 | 2.1:-43356118 | MS.gene75884:CDS |
GTTAAATCCATACCCTTCAG+TGG | 0.639356 | 2.1:-43354214 | MS.gene75884:CDS |
GGAAAAGTTATCTATGAGTG+GGG | 0.649648 | 2.1:-43354056 | MS.gene75884:CDS |
CAATAAAACAAATATTGCGG+AGG | 0.654109 | 2.1:-43353135 | MS.gene75884:CDS |
CCAGAACATAGTGAGCATGC+TGG | 0.659717 | 2.1:-43352258 | MS.gene75884:CDS |
GTTGCGTCTAGTACCCCTGT+AGG | 0.660935 | 2.1:-43353017 | MS.gene75884:CDS |
AAACTTCGGCAATATGAGAG+AGG | 0.671206 | 2.1:+43352839 | None:intergenic |
GCAGTGAGAATATTCGTCGG+AGG | 0.687502 | 2.1:-43357132 | MS.gene75884:CDS |
CTGGCACAGGTGTTTCATGG+TGG | 0.696551 | 2.1:-43352488 | MS.gene75884:CDS |
GTCGAAACATCAGAAGCTGG+TGG | 0.697024 | 2.1:+43356007 | None:intergenic |
ATCGGAAAGTGAAAGCAATG+GGG | 0.734526 | 2.1:-43353039 | MS.gene75884:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGAAAATAGAATTAATTTA+AGG | + | chr2.1:43353047-43353066 | None:intergenic | 10.0% |
!! | AGAAAATAGAATTAATTTAA+GGG | + | chr2.1:43353046-43353065 | None:intergenic | 10.0% |
!! | ATAAAATAATAAAAATGTGA+CGG | + | chr2.1:43352585-43352604 | None:intergenic | 10.0% |
!! | AAATAAATAAATGAGTAAAC+AGG | + | chr2.1:43353360-43353379 | None:intergenic | 15.0% |
!! | AAATCTGTATAATTAAACAA+TGG | + | chr2.1:43354915-43354934 | None:intergenic | 15.0% |
!! | AATAAATTTACTTAATCTGA+AGG | - | chr2.1:43354087-43354106 | MS.gene75884:CDS | 15.0% |
!! | ATAAATTTACTTAATCTGAA+GGG | - | chr2.1:43354088-43354107 | MS.gene75884:CDS | 15.0% |
!! | TTTAAAAGTAATGATTATGT+TGG | - | chr2.1:43353078-43353097 | MS.gene75884:CDS | 15.0% |
!!! | ATTTATTTTGTTATTCGTTA+CGG | + | chr2.1:43354074-43354093 | None:intergenic | 15.0% |
!!! | ATTTTTTTCTCAACAAATTA+AGG | + | chr2.1:43354583-43354602 | None:intergenic | 15.0% |
!!! | CATTTATTTTTTATTTGGAA+GGG | - | chr2.1:43355488-43355507 | MS.gene75884:intron | 15.0% |
!!! | CGTATCATTTATTTTTTATT+TGG | - | chr2.1:43355483-43355502 | MS.gene75884:intron | 15.0% |
!!! | GTTCAAATAAATATAGTTTT+AGG | - | chr2.1:43355774-43355793 | MS.gene75884:intron | 15.0% |
!!! | TCATTTATTTTTTATTTGGA+AGG | - | chr2.1:43355487-43355506 | MS.gene75884:intron | 15.0% |
!!! | TTTTTTTCTCAACAAATTAA+GGG | + | chr2.1:43354582-43354601 | None:intergenic | 15.0% |
!! | CAAAATTTAGAAAATAGGAA+AGG | - | chr2.1:43353868-43353887 | MS.gene75884:CDS | 20.0% |
!! | GTACACAAAATTTAGAAAAT+AGG | - | chr2.1:43353863-43353882 | MS.gene75884:CDS | 20.0% |
!! | TAAATTTACTTAATCTGAAG+GGG | - | chr2.1:43354089-43354108 | MS.gene75884:CDS | 20.0% |
!! | TAGAATTAATTTAAGGGTTT+AGG | + | chr2.1:43353040-43353059 | None:intergenic | 20.0% |
!! | TGTTAACTTAATCAAAATCA+AGG | + | chr2.1:43353821-43353840 | None:intergenic | 20.0% |
!! | TTGATTACAAAAGTCTATTT+AGG | - | chr2.1:43354706-43354725 | MS.gene75884:intron | 20.0% |
!! | TTTGTATACAAAACAAAACT+AGG | + | chr2.1:43355747-43355766 | None:intergenic | 20.0% |
!!! | GATTACTTTTATCAAAGAAT+AGG | - | chr2.1:43356020-43356039 | MS.gene75884:CDS | 20.0% |
!!! | TTTATTGTTTTTGCTATTTG+TGG | - | chr2.1:43353400-43353419 | MS.gene75884:intron | 20.0% |
!!! | TTTATTTTGTTATTCGTTAC+GGG | + | chr2.1:43354073-43354092 | None:intergenic | 20.0% |
! | AAATTGTAGTGTTTGTGAAA+AGG | - | chr2.1:43354793-43354812 | MS.gene75884:intron | 25.0% |
! | AAGGATAAGTTATCTATGAA+TGG | - | chr2.1:43355136-43355155 | MS.gene75884:intron | 25.0% |
! | AATGAGTAAACAGGTTATAA+TGG | + | chr2.1:43353351-43353370 | None:intergenic | 25.0% |
! | AATTGTAGTGTTTGTGAAAA+GGG | - | chr2.1:43354794-43354813 | MS.gene75884:intron | 25.0% |
! | ACACTTGGTTGATTAATTAA+GGG | + | chr2.1:43354664-43354683 | None:intergenic | 25.0% |
! | AGGATAAGTTATCTATGAAT+GGG | - | chr2.1:43355137-43355156 | MS.gene75884:intron | 25.0% |
! | AGTATATTAAGAGAAGTAGA+TGG | + | chr2.1:43354766-43354785 | None:intergenic | 25.0% |
! | AGTTTCCAGAATATTAAAGT+TGG | - | chr2.1:43355055-43355074 | MS.gene75884:intron | 25.0% |
! | ATATGAATTAAGAGTCAGTT+TGG | - | chr2.1:43352830-43352849 | MS.gene75884:CDS | 25.0% |
! | GAATTATGGTTAGATAACAT+AGG | - | chr2.1:43353766-43353785 | MS.gene75884:intron | 25.0% |
! | GTCCAATAAAACAAATATTG+CGG | - | chr2.1:43356089-43356108 | MS.gene75884:CDS | 25.0% |
! | TAGTTAAAACAACAGCTTAT+AGG | - | chr2.1:43352526-43352545 | MS.gene75884:CDS | 25.0% |
! | TGATCGTTTGAAAAAAGAAT+GGG | - | chr2.1:43353171-43353190 | MS.gene75884:intron | 25.0% |
! | TGTTATCTAACCATAATTCT+CGG | + | chr2.1:43353765-43353784 | None:intergenic | 25.0% |
! | TTAGTTACATTTCCTGAATA+AGG | + | chr2.1:43354525-43354544 | None:intergenic | 25.0% |
! | TTCAGTTATCACTTGTTTAT+TGG | + | chr2.1:43356682-43356701 | None:intergenic | 25.0% |
! | TTCTTTGATCATTTGTGTAT+TGG | + | chr2.1:43356556-43356575 | None:intergenic | 25.0% |
! | TTGATCGTTTGAAAAAAGAA+TGG | - | chr2.1:43353170-43353189 | MS.gene75884:intron | 25.0% |
! | TTGCATTGCATAATATAATC+AGG | - | chr2.1:43354117-43354136 | MS.gene75884:CDS | 25.0% |
!! | CTTTTATATTGTGATGAGAT+AGG | - | chr2.1:43353447-43353466 | MS.gene75884:intron | 25.0% |
!! | GCATAAGTTTTTATAGCTTA+TGG | - | chr2.1:43352976-43352995 | MS.gene75884:CDS | 25.0% |
!! | GTATAATGTCATTTGAAAAG+TGG | + | chr2.1:43354622-43354641 | None:intergenic | 25.0% |
!! | TTAAGTTGTTTATCCAAAGA+GGG | - | chr2.1:43353014-43353033 | MS.gene75884:CDS | 25.0% |
!!! | AGAATGATTTTGGAATGATT+AGG | - | chr2.1:43353634-43353653 | MS.gene75884:intron | 25.0% |
!!! | ATTCTTTTTTCAAACGATCA+AGG | + | chr2.1:43353171-43353190 | None:intergenic | 25.0% |
!!! | GAATGATTTTGGAATGATTA+GGG | - | chr2.1:43353635-43353654 | MS.gene75884:intron | 25.0% |
!!! | TTATCCTTTTTTGCGATAAA+AGG | + | chr2.1:43355124-43355143 | None:intergenic | 25.0% |
!!! | TTATTTTGTTATTCGTTACG+GGG | + | chr2.1:43354072-43354091 | None:intergenic | 25.0% |
!!! | TTATTTTTTATTTGGAAGGG+AGG | - | chr2.1:43355491-43355510 | MS.gene75884:intron | 25.0% |
AAAATAGTGTAGAGAACAAG+TGG | - | chr2.1:43353675-43353694 | MS.gene75884:intron | 30.0% | |
AAATGCACTATTTCCAAGAA+AGG | - | chr2.1:43354842-43354861 | MS.gene75884:intron | 30.0% | |
AACTTAGCACCAAAAATAAC+TGG | - | chr2.1:43356720-43356739 | MS.gene75884:intron | 30.0% | |
AGTTACAAGAAAAGCCTTAA+AGG | + | chr2.1:43354479-43354498 | None:intergenic | 30.0% | |
ATACGAATTAAGACTCAGTT+TGG | - | chr2.1:43352717-43352736 | MS.gene75884:CDS | 30.0% | |
ATATTGTGATGAGATAGGTT+TGG | - | chr2.1:43353452-43353471 | MS.gene75884:intron | 30.0% | |
ATTATATTAGCCCAGAATGT+AGG | - | chr2.1:43354442-43354461 | MS.gene75884:intron | 30.0% | |
CAAGCTTCTTGAAAAAGAAA+AGG | - | chr2.1:43355252-43355271 | MS.gene75884:intron | 30.0% | |
CAATAAAACAAATATTGCGG+AGG | - | chr2.1:43356092-43356111 | MS.gene75884:CDS | 30.0% | |
CTTACTGAAAAGTTTGGAAA+GGG | + | chr2.1:43352252-43352271 | None:intergenic | 30.0% | |
GAAAGAGGTCAAAAGATTTA+GGG | + | chr2.1:43354560-43354579 | None:intergenic | 30.0% | |
GACACTTGGTTGATTAATTA+AGG | + | chr2.1:43354665-43354684 | None:intergenic | 30.0% | |
GATTAAGTTAACACTGCATA+TGG | - | chr2.1:43353828-43353847 | MS.gene75884:CDS | 30.0% | |
GCGGTTAAATATCAATGATA+CGG | - | chr2.1:43353527-43353546 | MS.gene75884:intron | 30.0% | |
GCTGATAAGAATACTATTGA+TGG | - | chr2.1:43356909-43356928 | MS.gene75884:intron | 30.0% | |
GGATAAGTTATCTATGAATG+GGG | - | chr2.1:43355138-43355157 | MS.gene75884:intron | 30.0% | |
GTTATCACTTGTTTATTGGT+AGG | + | chr2.1:43356678-43356697 | None:intergenic | 30.0% | |
TACATTGTCAAAACAGCATA+AGG | + | chr2.1:43352811-43352830 | None:intergenic | 30.0% | |
TGACACTAACACTTAACAAA+GGG | + | chr2.1:43356000-43356019 | None:intergenic | 30.0% | |
TGATATATTGCAGGTATTTG+CGG | - | chr2.1:43353508-43353527 | MS.gene75884:intron | 30.0% | |
TGTTAAAAAGCTGTTTAGCT+AGG | - | chr2.1:43355626-43355645 | MS.gene75884:intron | 30.0% | |
TTAAGTGAAGTGAGAAAGAT+TGG | + | chr2.1:43352278-43352297 | None:intergenic | 30.0% | |
TTACTTCCCAAGATTAAGAA+CGG | - | chr2.1:43353318-43353337 | MS.gene75884:intron | 30.0% | |
TTATATTAGCCCAGAATGTA+GGG | - | chr2.1:43354443-43354462 | MS.gene75884:intron | 30.0% | |
TTATGGATAGTAGTTGTGAT+CGG | - | chr2.1:43353606-43353625 | MS.gene75884:intron | 30.0% | |
! | ACGTTTAGAGCTTATTTGAT+TGG | + | chr2.1:43355927-43355946 | None:intergenic | 30.0% |
! | ATACATGTGACTTTAGAAGT+TGG | - | chr2.1:43352615-43352634 | MS.gene75884:CDS | 30.0% |
! | ATATCAAGGTGTATAGGTTT+TGG | + | chr2.1:43354328-43354347 | None:intergenic | 30.0% |
! | GTTAAGTTGTTTATCCAAAG+AGG | - | chr2.1:43353013-43353032 | MS.gene75884:CDS | 30.0% |
! | GTTTTTCTTTGTTGCAATGT+TGG | + | chr2.1:43355404-43355423 | None:intergenic | 30.0% |
! | TCATAAGTTTTCCTAGCTTA+CGG | + | chr2.1:43352892-43352911 | None:intergenic | 30.0% |
! | TGTTTTCAATCCAAAACTCT+TGG | + | chr2.1:43354221-43354240 | None:intergenic | 30.0% |
! | TTGATCATTTGTGTATTGGT+AGG | + | chr2.1:43356552-43356571 | None:intergenic | 30.0% |
!! | AGGAGCATTTATACACAAAA+GGG | - | chr2.1:43354726-43354745 | MS.gene75884:intron | 30.0% |
!! | CTTGTTTTCATAAGCTCTTT+AGG | - | chr2.1:43352498-43352517 | MS.gene75884:CDS | 30.0% |
!! | TAGAGAGTATCAATCATTAC+TGG | + | chr2.1:43354248-43354267 | None:intergenic | 30.0% |
!! | TAGGAGCATTTATACACAAA+AGG | - | chr2.1:43354725-43354744 | MS.gene75884:intron | 30.0% |
!!! | ACTACATCTGTTTTAATTGG+TGG | - | chr2.1:43354191-43354210 | MS.gene75884:CDS | 30.0% |
!!! | AGCACTACATCTGTTTTAAT+TGG | - | chr2.1:43354188-43354207 | MS.gene75884:CDS | 30.0% |
!!! | AGTAAATTCAGGTTGGTTTT+TGG | - | chr2.1:43355515-43355534 | MS.gene75884:intron | 30.0% |
!!! | CTAGTTCGTTGTGTTTTTTA+AGG | + | chr2.1:43355851-43355870 | None:intergenic | 30.0% |
!!! | CTCCGCAATATTTGTTTTAT+TGG | + | chr2.1:43356094-43356113 | None:intergenic | 30.0% |
!!! | GAATGACGATTTTGATTGAT+TGG | - | chr2.1:43352664-43352683 | MS.gene75884:CDS | 30.0% |
!!! | GTAAATTCAGGTTGGTTTTT+GGG | - | chr2.1:43355516-43355535 | MS.gene75884:intron | 30.0% |
AAAAGCTGTGAAAGGCTAAA+TGG | + | chr2.1:43356807-43356826 | None:intergenic | 35.0% | |
AAACGATGAAACTGAAGACA+TGG | - | chr2.1:43356464-43356483 | MS.gene75884:intron | 35.0% | |
AAATCGGAAAGTGAAAGCAA+TGG | - | chr2.1:43356186-43356205 | MS.gene75884:intron | 35.0% | |
AAATCGTTGAAACAAGTCCA+AGG | - | chr2.1:43357027-43357046 | MS.gene75884:CDS | 35.0% | |
AACCTATACACCTTGATATG+TGG | - | chr2.1:43354329-43354348 | MS.gene75884:intron | 35.0% | |
AACGAACCGTTCTTAATCTT+GGG | + | chr2.1:43353327-43353346 | None:intergenic | 35.0% | |
AATCGGAAAGTGAAAGCAAT+GGG | - | chr2.1:43356187-43356206 | MS.gene75884:intron | 35.0% | |
AATCGTTGAAACAAGTCCAA+GGG | - | chr2.1:43357028-43357047 | MS.gene75884:CDS | 35.0% | |
AATGGAAATGCTAACATGTG+AGG | + | chr2.1:43354897-43354916 | None:intergenic | 35.0% | |
ACTACCTTATCAGCTAGTTA+TGG | + | chr2.1:43355550-43355569 | None:intergenic | 35.0% | |
AGATGTAGTGCTTTCAATCA+TGG | + | chr2.1:43354180-43354199 | None:intergenic | 35.0% | |
AGGATATTGGGAATAGTTTG+AGG | - | chr2.1:43353703-43353722 | MS.gene75884:intron | 35.0% | |
AGGGAAAAGTTATCTATGAG+TGG | - | chr2.1:43355169-43355188 | MS.gene75884:intron | 35.0% | |
AGGGAGATATTTGACCTTTA+AGG | - | chr2.1:43354462-43354481 | MS.gene75884:intron | 35.0% | |
AGTTTCATCGTTTGTAGAAG+AGG | + | chr2.1:43356457-43356476 | None:intergenic | 35.0% | |
ATAATTCGTGCCACATATCA+AGG | + | chr2.1:43354342-43354361 | None:intergenic | 35.0% | |
ATGGAAATGCTAACATGTGA+GGG | + | chr2.1:43354896-43354915 | None:intergenic | 35.0% | |
ATGTTGGCATTGCAGTATAA+TGG | - | chr2.1:43353094-43353113 | MS.gene75884:CDS | 35.0% | |
ATTGCTTTCACTTTCCGATT+TGG | + | chr2.1:43356187-43356206 | None:intergenic | 35.0% | |
CAAATATCTCCCTACATTCT+GGG | + | chr2.1:43354455-43354474 | None:intergenic | 35.0% | |
CAAGAAAGGATTTCCACATT+GGG | - | chr2.1:43354856-43354875 | MS.gene75884:intron | 35.0% | |
CACAATCACAAAAATGCACA+GGG | + | chr2.1:43355087-43355106 | None:intergenic | 35.0% | |
CATAGTAGAACCGAGAATTA+TGG | - | chr2.1:43353752-43353771 | MS.gene75884:intron | 35.0% | |
CATCAAAAGCCTTGACATTA+AGG | - | chr2.1:43353571-43353590 | MS.gene75884:intron | 35.0% | |
CCTTACTGAAAAGTTTGGAA+AGG | + | chr2.1:43352253-43352272 | None:intergenic | 35.0% | |
CGAAAACTGTTCGAATCATT+GGG | - | chr2.1:43352149-43352168 | MS.gene75884:CDS | 35.0% | |
CGATCTGCAAATGTTGAAAT+AGG | - | chr2.1:43357053-43357072 | MS.gene75884:CDS | 35.0% | |
CTCAACAAATTAAGGGAAAG+AGG | + | chr2.1:43354575-43354594 | None:intergenic | 35.0% | |
CTCTTCTATCACTCTTGTAT+TGG | + | chr2.1:43356598-43356617 | None:intergenic | 35.0% | |
CTGACACTAACACTTAACAA+AGG | + | chr2.1:43356001-43356020 | None:intergenic | 35.0% | |
CTTGGGAAGTAAATATTGAG+AGG | + | chr2.1:43353310-43353329 | None:intergenic | 35.0% | |
GAAAATAGGAAAGGAAACCA+TGG | - | chr2.1:43353877-43353896 | MS.gene75884:CDS | 35.0% | |
GAGAAAATCACTTCCCAAAT+CGG | - | chr2.1:43356170-43356189 | MS.gene75884:intron | 35.0% | |
GAGGACCAACTTTAATATTC+TGG | + | chr2.1:43355063-43355082 | None:intergenic | 35.0% | |
GCTATTTGTGGAAAAGTCTA+TGG | - | chr2.1:43353412-43353431 | MS.gene75884:intron | 35.0% | |
GGAAAAGTTATCTATGAGTG+GGG | - | chr2.1:43355171-43355190 | MS.gene75884:intron | 35.0% | |
GGAAAGAGGTCAAAAGATTT+AGG | + | chr2.1:43354561-43354580 | None:intergenic | 35.0% | |
GGATATTGGGAATAGTTTGA+GGG | - | chr2.1:43353704-43353723 | MS.gene75884:intron | 35.0% | |
GGGAAAAGTTATCTATGAGT+GGG | - | chr2.1:43355170-43355189 | MS.gene75884:intron | 35.0% | |
GTCAAAAGATTTAGGGATAG+AGG | + | chr2.1:43354553-43354572 | None:intergenic | 35.0% | |
GTTATTCTCATTAGCCAACT+GGG | + | chr2.1:43356781-43356800 | None:intergenic | 35.0% | |
TAAAACAAATATTGCGGAGG+AGG | - | chr2.1:43356095-43356114 | MS.gene75884:CDS | 35.0% | |
TAACGAACCGTTCTTAATCT+TGG | + | chr2.1:43353328-43353347 | None:intergenic | 35.0% | |
TACTATTGATGGAACTGTCA+CGG | - | chr2.1:43356920-43356939 | MS.gene75884:intron | 35.0% | |
TAGAATCAGCAAGGAAATCA+AGG | + | chr2.1:43352226-43352245 | None:intergenic | 35.0% | |
TATGAATGGGGAAACTGAAA+GGG | - | chr2.1:43355150-43355169 | MS.gene75884:intron | 35.0% | |
TATGGATAGTAGTTGTGATC+GGG | - | chr2.1:43353607-43353626 | MS.gene75884:intron | 35.0% | |
TCAAATATCTCCCTACATTC+TGG | + | chr2.1:43354456-43354475 | None:intergenic | 35.0% | |
TCACAATCACAAAAATGCAC+AGG | + | chr2.1:43355088-43355107 | None:intergenic | 35.0% | |
TCCGCAGATAAACTCAAATA+AGG | + | chr2.1:43352436-43352455 | None:intergenic | 35.0% | |
TCGAAAACTGTTCGAATCAT+TGG | - | chr2.1:43352148-43352167 | MS.gene75884:CDS | 35.0% | |
TCGTAAACCAAACGAATTTG+CGG | - | chr2.1:43353984-43354003 | MS.gene75884:CDS | 35.0% | |
TCTTCAGCAGTATCAAACTT+CGG | + | chr2.1:43356405-43356424 | None:intergenic | 35.0% | |
TGAAAAGTGGCTTACACTAA+GGG | + | chr2.1:43354609-43354628 | None:intergenic | 35.0% | |
TGCGATTCTTGATATATTGC+AGG | - | chr2.1:43353499-43353518 | MS.gene75884:intron | 35.0% | |
TGGAAAGCTGAAACTTGAAA+AGG | - | chr2.1:43353132-43353151 | MS.gene75884:CDS | 35.0% | |
TGGAGCAGAAACTATATCAT+CGG | + | chr2.1:43356997-43357016 | None:intergenic | 35.0% | |
TGGTACCTTACTGAAAAGTT+TGG | + | chr2.1:43352258-43352277 | None:intergenic | 35.0% | |
TGTTATTCTCATTAGCCAAC+TGG | + | chr2.1:43356782-43356801 | None:intergenic | 35.0% | |
TGTTGGCATTGCAGTATAAT+GGG | - | chr2.1:43353095-43353114 | MS.gene75884:CDS | 35.0% | |
TTATCTTGATTCCGTAAGCT+AGG | - | chr2.1:43352878-43352897 | MS.gene75884:CDS | 35.0% | |
TTCTGATGTTTCGACTCATA+AGG | - | chr2.1:43353228-43353247 | MS.gene75884:intron | 35.0% | |
TTGAAAAGTGGCTTACACTA+AGG | + | chr2.1:43354610-43354629 | None:intergenic | 35.0% | |
TTGCTTTCACTTTCCGATTT+GGG | + | chr2.1:43356186-43356205 | None:intergenic | 35.0% | |
TTTCAATCCAAAACTCTTGG+AGG | + | chr2.1:43354218-43354237 | None:intergenic | 35.0% | |
TTTGCCATAACTAGCTGATA+AGG | - | chr2.1:43355543-43355562 | MS.gene75884:intron | 35.0% | |
! | AAAAACAAAGCAGCTTTGAC+AGG | - | chr2.1:43355418-43355437 | MS.gene75884:intron | 35.0% |
! | AAAACAAAGCAGCTTTGACA+GGG | - | chr2.1:43355419-43355438 | MS.gene75884:intron | 35.0% |
! | AAAGGGATTTAGAATCAGCA+AGG | + | chr2.1:43352235-43352254 | None:intergenic | 35.0% |
! | ACTGAACCAGAACATGATTT+TGG | - | chr2.1:43356285-43356304 | MS.gene75884:intron | 35.0% |
! | CAGTCCTTTTATCGCAAAAA+AGG | - | chr2.1:43355117-43355136 | MS.gene75884:intron | 35.0% |
! | CATTAGTTTCCCAGAACAAA+CGG | - | chr2.1:43356833-43356852 | MS.gene75884:intron | 35.0% |
! | CCTTTCCAAACTTTTCAGTA+AGG | - | chr2.1:43352250-43352269 | MS.gene75884:CDS | 35.0% |
! | CTGAACCAGAACATGATTTT+GGG | - | chr2.1:43356286-43356305 | MS.gene75884:intron | 35.0% |
! | GAACAGTTTTCGAATGTCAT+CGG | + | chr2.1:43352141-43352160 | None:intergenic | 35.0% |
! | GGAATGATTAGGGTTTTCTA+GGG | - | chr2.1:43353645-43353664 | MS.gene75884:intron | 35.0% |
! | TCAACGATTTTCTCAACTAC+TGG | + | chr2.1:43357017-43357036 | None:intergenic | 35.0% |
! | TCATAAGGAGGATTTGGTAA+AGG | - | chr2.1:43353243-43353262 | MS.gene75884:intron | 35.0% |
! | TCTATCACTCTTGTATTGGT+AGG | + | chr2.1:43356594-43356613 | None:intergenic | 35.0% |
! | TGAACCAGAACATGATTTTG+GGG | - | chr2.1:43356287-43356306 | MS.gene75884:intron | 35.0% |
! | TGGAATGATTAGGGTTTTCT+AGG | - | chr2.1:43353644-43353663 | MS.gene75884:intron | 35.0% |
! | TGGTTTACGATAGAGCATTA+TGG | + | chr2.1:43353974-43353993 | None:intergenic | 35.0% |
! | TGTATTGGTAGGTTGAGATT+CGG | + | chr2.1:43356541-43356560 | None:intergenic | 35.0% |
! | TGTGCATTTTTGTGATTGTG+AGG | - | chr2.1:43355087-43355106 | MS.gene75884:intron | 35.0% |
!! | AAATCATGTTCTGGTTCAGT+AGG | + | chr2.1:43356285-43356304 | None:intergenic | 35.0% |
!! | ACAAGTGGATTGAAGGATAT+TGG | - | chr2.1:43353690-43353709 | MS.gene75884:intron | 35.0% |
!! | CAAGTGGATTGAAGGATATT+GGG | - | chr2.1:43353691-43353710 | MS.gene75884:intron | 35.0% |
!! | CATGATCCTTTCAAGTTCTT+GGG | + | chr2.1:43355446-43355465 | None:intergenic | 35.0% |
!! | GAGAATTTTTGAGAGAGCTA+TGG | - | chr2.1:43352780-43352799 | MS.gene75884:CDS | 35.0% |
!! | GCCTTATTTGAGTTTATCTG+CGG | - | chr2.1:43352432-43352451 | MS.gene75884:CDS | 35.0% |
AAAATGCAGACCCTTCTAGA+TGG | - | chr2.1:43356240-43356259 | MS.gene75884:intron | 40.0% | |
AAACACCTACGAGACTGTTT+GGG | - | chr2.1:43352459-43352478 | MS.gene75884:CDS | 40.0% | |
AAACTTCGGCAATATGAGAG+AGG | + | chr2.1:43356391-43356410 | None:intergenic | 40.0% | |
AAAGAAATCTTGGACCCAGT+TGG | - | chr2.1:43356764-43356783 | MS.gene75884:intron | 40.0% | |
AAAGCTAAAGCTGCTGTTAG+TGG | - | chr2.1:43357125-43357144 | MS.gene75884:CDS | 40.0% | |
AAATGCAGACCCTTCTAGAT+GGG | - | chr2.1:43356241-43356260 | MS.gene75884:intron | 40.0% | |
AACCCATTGAAGCGCAAAAA+AGG | - | chr2.1:43356118-43356137 | MS.gene75884:CDS | 40.0% | |
AAGTTATGCTGAGTTTCAGC+AGG | + | chr2.1:43356705-43356724 | None:intergenic | 40.0% | |
ACATGTTAAGGAACCCAATG+TGG | + | chr2.1:43354872-43354891 | None:intergenic | 40.0% | |
ACGAATTATTGTGTAGCGCT+AGG | - | chr2.1:43354353-43354372 | MS.gene75884:intron | 40.0% | |
ACGATCAAGGTAATGCTCTT+TGG | + | chr2.1:43353158-43353177 | None:intergenic | 40.0% | |
ACTATCCATAACTGTGATCG+TGG | + | chr2.1:43353597-43353616 | None:intergenic | 40.0% | |
AGAATATTCGTCGGAGGATT+AGG | - | chr2.1:43352101-43352120 | MS.gene75884:CDS | 40.0% | |
AGAGCAGTGAGAATATTCGT+CGG | - | chr2.1:43352092-43352111 | MS.gene75884:CDS | 40.0% | |
ATAAGGATGCAGTTAGCAAG+AGG | + | chr2.1:43354508-43354527 | None:intergenic | 40.0% | |
ATATTGAGAGGCTTTGCATC+TGG | + | chr2.1:43353298-43353317 | None:intergenic | 40.0% | |
ATCGGAAAGTGAAAGCAATG+GGG | - | chr2.1:43356188-43356207 | MS.gene75884:intron | 40.0% | |
CATGGTGGCAAAAGAAATCT+TGG | - | chr2.1:43356754-43356773 | MS.gene75884:intron | 40.0% | |
CCAAGAAAGGATTTCCACAT+TGG | - | chr2.1:43354855-43354874 | MS.gene75884:intron | 40.0% | |
CCAAGAACTTGAAAGGATCA+TGG | - | chr2.1:43355444-43355463 | MS.gene75884:intron | 40.0% | |
CCAATGTGGAAATCCTTTCT+TGG | + | chr2.1:43354858-43354877 | None:intergenic | 40.0% | |
CTATGAATGGGGAAACTGAA+AGG | - | chr2.1:43355149-43355168 | MS.gene75884:intron | 40.0% | |
GAAGATCAGCAAAACTCTCA+TGG | - | chr2.1:43356420-43356439 | MS.gene75884:intron | 40.0% | |
GTAGATAGTGCAACAGATGA+TGG | - | chr2.1:43355352-43355371 | MS.gene75884:intron | 40.0% | |
GTTAAATCCATACCCTTCAG+TGG | - | chr2.1:43355013-43355032 | MS.gene75884:intron | 40.0% | |
GTTCTTTAGCCGTTTGTTCT+GGG | + | chr2.1:43356845-43356864 | None:intergenic | 40.0% | |
GTTTAGCTAGGTTATTCAGC+TGG | - | chr2.1:43355638-43355657 | MS.gene75884:intron | 40.0% | |
GTTTCTAACACCAAGCATCT+TGG | - | chr2.1:43355274-43355293 | MS.gene75884:intron | 40.0% | |
TAAACACCTACGAGACTGTT+TGG | - | chr2.1:43352458-43352477 | MS.gene75884:CDS | 40.0% | |
TAACACTTAACAAAGGGCTG+TGG | + | chr2.1:43355994-43356013 | None:intergenic | 40.0% | |
TCTTCATCGTTCAAGACACT+TGG | + | chr2.1:43354679-43354698 | None:intergenic | 40.0% | |
TGAAAGGATCATGGAAAGTC+AGG | - | chr2.1:43355453-43355472 | MS.gene75884:intron | 40.0% | |
TGATGTTTCGACTCATAAGG+AGG | - | chr2.1:43353231-43353250 | MS.gene75884:intron | 40.0% | |
TGCCACATATCAAGGTGTAT+AGG | + | chr2.1:43354334-43354353 | None:intergenic | 40.0% | |
TGCTAACTGCATCCTTATTC+AGG | - | chr2.1:43354510-43354529 | MS.gene75884:intron | 40.0% | |
TGCTACAAATATACCTGTGC+AGG | - | chr2.1:43354991-43355010 | MS.gene75884:intron | 40.0% | |
TTCGACTCATAAGGAGGATT+TGG | - | chr2.1:43353237-43353256 | MS.gene75884:intron | 40.0% | |
TTCTTCTATCACCTGTGCAT+TGG | + | chr2.1:43356640-43356659 | None:intergenic | 40.0% | |
! | ACTTTTGTAGGTTCGCTTTC+TGG | + | chr2.1:43356504-43356523 | None:intergenic | 40.0% |
! | ATCGGGTGGAAGAATGATTT+TGG | - | chr2.1:43353624-43353643 | MS.gene75884:intron | 40.0% |
! | CATTTTACTCTTGCCTACAG+GGG | + | chr2.1:43356226-43356245 | None:intergenic | 40.0% |
! | CTTTTGTAGGTTCGCTTTCT+GGG | + | chr2.1:43356503-43356522 | None:intergenic | 40.0% |
! | GCATTTTACTCTTGCCTACA+GGG | + | chr2.1:43356227-43356246 | None:intergenic | 40.0% |
! | TCTACAAAGCGTCTTGCATT+AGG | + | chr2.1:43353274-43353293 | None:intergenic | 40.0% |
! | TGATGAGATAGGTTTGGTCA+AGG | - | chr2.1:43353458-43353477 | MS.gene75884:intron | 40.0% |
! | TGCATTTTACTCTTGCCTAC+AGG | + | chr2.1:43356228-43356247 | None:intergenic | 40.0% |
!! | ACACCTGTGCCAGTTATTTT+TGG | + | chr2.1:43356732-43356751 | None:intergenic | 40.0% |
!! | AGAGAACTTGTTGGTAAAGG+AGG | - | chr2.1:43356348-43356367 | MS.gene75884:intron | 40.0% |
!! | ATGATTAGGGTTTTCTAGGG+TGG | - | chr2.1:43353648-43353667 | MS.gene75884:intron | 40.0% |
!! | CCATGATCCTTTCAAGTTCT+TGG | + | chr2.1:43355447-43355466 | None:intergenic | 40.0% |
!! | CTTCTGAGACCATGAAACTT+TGG | + | chr2.1:43356319-43356338 | None:intergenic | 40.0% |
!! | GGCTCTTCTATCACTTTTGT+AGG | + | chr2.1:43356516-43356535 | None:intergenic | 40.0% |
!! | GTAGAGAACAAGTGGATTGA+AGG | - | chr2.1:43353683-43353702 | MS.gene75884:intron | 40.0% |
!! | GTGCTGATTCTTTGAAAGAG+TGG | - | chr2.1:43357099-43357118 | MS.gene75884:CDS | 40.0% |
!! | TATAATGGGTGTGTGTGGAA+AGG | - | chr2.1:43353109-43353128 | MS.gene75884:CDS | 40.0% |
!! | TGGAGAGAACTTGTTGGTAA+AGG | - | chr2.1:43356345-43356364 | MS.gene75884:intron | 40.0% |
!! | TGTTCTGGGAAACTAATGTC+AGG | + | chr2.1:43356831-43356850 | None:intergenic | 40.0% |
!! | TTGTTGTTTGCTGAAGTCCA+TGG | + | chr2.1:43353897-43353916 | None:intergenic | 40.0% |
!!! | CTCCTTTTTTGCGCTTCAAT+GGG | + | chr2.1:43356123-43356142 | None:intergenic | 40.0% |
ACATTTGCAGATCGTTCCCT+TGG | + | chr2.1:43357047-43357066 | None:intergenic | 45.0% | |
ACCATTATGCTTGCACTCAC+TGG | + | chr2.1:43356889-43356908 | None:intergenic | 45.0% | |
ATGAGTGGGGAAGCAGAAAT+TGG | - | chr2.1:43355184-43355203 | MS.gene75884:intron | 45.0% | |
ATTGATGGAACTGTCACGGA+TGG | - | chr2.1:43356924-43356943 | MS.gene75884:intron | 45.0% | |
CTCGAAACCATTCGTACCAA+AGG | - | chr2.1:43352185-43352204 | MS.gene75884:CDS | 45.0% | |
GACTCCCCAAAATCATGTTC+TGG | + | chr2.1:43356294-43356313 | None:intergenic | 45.0% | |
GCACCAAAAATAACTGGCAC+AGG | - | chr2.1:43356726-43356745 | MS.gene75884:intron | 45.0% | |
GGAAGGGAGGTAGTAAATTC+AGG | - | chr2.1:43355504-43355523 | MS.gene75884:intron | 45.0% | |
GGGAGGTAGTAAATTCAGGT+TGG | - | chr2.1:43355508-43355527 | MS.gene75884:intron | 45.0% | |
GGTATGGATTTAACCTGCAC+AGG | + | chr2.1:43355007-43355026 | None:intergenic | 45.0% | |
GGTTCTTTAGCCGTTTGTTC+TGG | + | chr2.1:43356846-43356865 | None:intergenic | 45.0% | |
GTGCTTCTTTCCAAGATGCT+TGG | + | chr2.1:43355287-43355306 | None:intergenic | 45.0% | |
TAACTGGCACAGGTGTTTCA+TGG | - | chr2.1:43356736-43356755 | MS.gene75884:intron | 45.0% | |
TAAGGCCACGATCACAGTTA+TGG | - | chr2.1:43353589-43353608 | MS.gene75884:intron | 45.0% | |
TCACAAAAATGCACAGGGAG+AGG | + | chr2.1:43355082-43355101 | None:intergenic | 45.0% | |
TCACGGATGGCTTCAACTTA+GGG | - | chr2.1:43356937-43356956 | MS.gene75884:intron | 45.0% | |
TCAGACTGAAGATCTGAAGG+TGG | + | chr2.1:43354029-43354048 | None:intergenic | 45.0% | |
TCCAGTGAGTGCAAGCATAA+TGG | - | chr2.1:43356885-43356904 | MS.gene75884:intron | 45.0% | |
TCGAATGTCATCGGTGGTTA+CGG | + | chr2.1:43352132-43352151 | None:intergenic | 45.0% | |
TCTTCGTGGAGAGAACTTGT+TGG | - | chr2.1:43356339-43356358 | MS.gene75884:intron | 45.0% | |
TGAGTCGAAACATCAGAAGC+TGG | + | chr2.1:43353226-43353245 | None:intergenic | 45.0% | |
TGCTTACCAGTTCCACTGAA+GGG | + | chr2.1:43355028-43355047 | None:intergenic | 45.0% | |
TGGGAATAGTTTGAGGGTGA+GGG | - | chr2.1:43353710-43353729 | MS.gene75884:intron | 45.0% | |
TGTCAGGCAAAAGCTGTGAA+AGG | + | chr2.1:43356815-43356834 | None:intergenic | 45.0% | |
TTAAGGGTTTAGGCCCTCTT+TGG | + | chr2.1:43353030-43353049 | None:intergenic | 45.0% | |
TTGGGAATAGTTTGAGGGTG+AGG | - | chr2.1:43353709-43353728 | MS.gene75884:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr2.1:43353925-43353944 | MS.gene75884:CDS | 45.0% |
! | ACATGTGAGGGCACATGTTA+AGG | + | chr2.1:43354884-43354903 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr2.1:43353924-43353943 | MS.gene75884:CDS | 45.0% |
! | CAGTTTTCGAATGTCATCGG+TGG | + | chr2.1:43352138-43352157 | None:intergenic | 45.0% |
! | GGCGTAGAGTCACTTTACTA+TGG | + | chr2.1:43354307-43354326 | None:intergenic | 45.0% |
! | TCTATCACCTGTGCATTGGT+AGG | + | chr2.1:43356636-43356655 | None:intergenic | 45.0% |
! | TGATCGTGGCCTTAATGTCA+AGG | + | chr2.1:43353583-43353602 | None:intergenic | 45.0% |
!! | CTTTTGATTCACTCGAGTCG+CGG | + | chr2.1:43354278-43354297 | None:intergenic | 45.0% |
!! | TGCAGTATAATGGGTGTGTG+TGG | - | chr2.1:43353104-43353123 | MS.gene75884:CDS | 45.0% |
!!! | GCTCCTTTTTTGCGCTTCAA+TGG | + | chr2.1:43356124-43356143 | None:intergenic | 45.0% |
AAACGAATTTGCGGTGAGCG+TGG | - | chr2.1:43353993-43354012 | MS.gene75884:CDS | 50.0% | |
AATGGGTGTGTGTGGAAAGG+TGG | - | chr2.1:43353112-43353131 | MS.gene75884:CDS | 50.0% | |
ACCAGTTCCACTGAAGGGTA+TGG | + | chr2.1:43355023-43355042 | None:intergenic | 50.0% | |
ACGCTCACCGCAAATTCGTT+TGG | + | chr2.1:43353994-43354013 | None:intergenic | 50.0% | |
ACTGCGACCTTTGGTACGAA+TGG | + | chr2.1:43352195-43352214 | None:intergenic | 50.0% | |
AGATCCCAGCCCATCTAGAA+GGG | + | chr2.1:43356253-43356272 | None:intergenic | 50.0% | |
AGTGGGGAAGCAGAAATTGG+TGG | - | chr2.1:43355187-43355206 | MS.gene75884:intron | 50.0% | |
ATCTCTGCCTACCAATGCAC+AGG | - | chr2.1:43356626-43356645 | MS.gene75884:intron | 50.0% | |
ATGCTTGCACTCACTGGAAC+CGG | + | chr2.1:43356883-43356902 | None:intergenic | 50.0% | |
CACGGATGGCTTCAACTTAG+GGG | - | chr2.1:43356938-43356957 | MS.gene75884:intron | 50.0% | |
CAGGGACCCAAGAACTTGAA+AGG | - | chr2.1:43355437-43355456 | MS.gene75884:intron | 50.0% | |
CATGGTCTCAGAAGTCTTCG+TGG | - | chr2.1:43356325-43356344 | MS.gene75884:intron | 50.0% | |
CCACTTAGTGGGATAAGGCT+TGG | + | chr2.1:43353926-43353945 | None:intergenic | 50.0% | |
CCAGAACATAGTGAGCATGC+TGG | - | chr2.1:43356969-43356988 | MS.gene75884:intron | 50.0% | |
CCAGCATGCTCACTATGTTC+TGG | + | chr2.1:43356972-43356991 | None:intergenic | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | chr2.1:43353929-43353948 | MS.gene75884:CDS | 50.0% | |
GAACCGGCAGGGTACAAAAT+GGG | + | chr2.1:43356867-43356886 | None:intergenic | 50.0% | |
GAGCAAGAGCGATTCTAGCA+AGG | - | chr2.1:43356140-43356159 | MS.gene75884:intron | 50.0% | |
GCAGTGAGAATATTCGTCGG+AGG | - | chr2.1:43352095-43352114 | MS.gene75884:CDS | 50.0% | |
GCGTCAGACTGAAGATCTGA+AGG | + | chr2.1:43354032-43354051 | None:intergenic | 50.0% | |
GGATAGTAGTTGTGATCGGG+TGG | - | chr2.1:43353610-43353629 | MS.gene75884:intron | 50.0% | |
GGGAGTCTGCCAAAGTTTCA+TGG | - | chr2.1:43356307-43356326 | MS.gene75884:intron | 50.0% | |
GTCACGGATGGCTTCAACTT+AGG | - | chr2.1:43356936-43356955 | MS.gene75884:intron | 50.0% | |
GTCGAAACATCAGAAGCTGG+TGG | + | chr2.1:43353223-43353242 | None:intergenic | 50.0% | |
GTGCTTACCAGTTCCACTGA+AGG | + | chr2.1:43355029-43355048 | None:intergenic | 50.0% | |
TCCATACCCTTCAGTGGAAC+TGG | - | chr2.1:43355019-43355038 | MS.gene75884:intron | 50.0% | |
TCTCTCCCAAACAGTCTCGT+AGG | + | chr2.1:43352467-43352486 | None:intergenic | 50.0% | |
TTGGTAGGCAGAGATTCAGC+AGG | + | chr2.1:43356621-43356640 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | chr2.1:43353923-43353942 | MS.gene75884:CDS | 50.0% |
! | GAACCCATTTTGTACCCTGC+CGG | - | chr2.1:43356861-43356880 | MS.gene75884:intron | 50.0% |
! | TGGTGGTCCTCCAAGAGTTT+TGG | - | chr2.1:43354208-43354227 | MS.gene75884:CDS | 50.0% |
! | TTGGTAGGTTGAGATTCGGC+AGG | + | chr2.1:43356537-43356556 | None:intergenic | 50.0% |
! | TTGGTAGGTTGAGCTTCAGC+AGG | + | chr2.1:43356579-43356598 | None:intergenic | 50.0% |
ACTAAGTGGGGTCGGCTACA+TGG | - | chr2.1:43353937-43353956 | MS.gene75884:CDS | 55.0% | |
AGTTTGAGGGTGAGGGAGTG+TGG | - | chr2.1:43353717-43353736 | MS.gene75884:intron | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr2.1:43353938-43353957 | None:intergenic | 55.0% | |
CAGATCCCAGCCCATCTAGA+AGG | + | chr2.1:43356254-43356273 | None:intergenic | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | chr2.1:43353931-43353950 | None:intergenic | 55.0% | |
CGTTACGGGGATAGCTCAGT+CGG | + | chr2.1:43354059-43354078 | None:intergenic | 55.0% | |
CTGGCACAGGTGTTTCATGG+TGG | - | chr2.1:43356739-43356758 | MS.gene75884:intron | 55.0% | |
GGAACCGGCAGGGTACAAAA+TGG | + | chr2.1:43356868-43356887 | None:intergenic | 55.0% | |
GTAAGCGAGACTGCGACCTT+TGG | + | chr2.1:43352204-43352223 | None:intergenic | 55.0% | |
GTTACGGGGATAGCTCAGTC+GGG | + | chr2.1:43354058-43354077 | None:intergenic | 55.0% | |
GTTGCGTCTAGTACCCCTGT+AGG | - | chr2.1:43356210-43356229 | MS.gene75884:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr2.1:43353937-43353956 | None:intergenic | 55.0% | |
! | CAGACCCTTCTAGATGGGCT+GGG | - | chr2.1:43356246-43356265 | MS.gene75884:intron | 55.0% |
!! | CTTCTAGATGGGCTGGGATC+TGG | - | chr2.1:43356252-43356271 | MS.gene75884:intron | 55.0% |
GCAGACCCTTCTAGATGGGC+TGG | - | chr2.1:43356245-43356264 | MS.gene75884:intron | 60.0% | |
TGCACTCACTGGAACCGGCA+GGG | + | chr2.1:43356878-43356897 | None:intergenic | 60.0% | |
TTGCACTCACTGGAACCGGC+AGG | + | chr2.1:43356879-43356898 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 43352068 | 43357181 | 43352068 | ID=MS.gene75884 |
chr2.1 | mRNA | 43352068 | 43357181 | 43352068 | ID=MS.gene75884.t1;Parent=MS.gene75884 |
chr2.1 | exon | 43356978 | 43357181 | 43356978 | ID=MS.gene75884.t1.exon1;Parent=MS.gene75884.t1 |
chr2.1 | CDS | 43356978 | 43357181 | 43356978 | ID=cds.MS.gene75884.t1;Parent=MS.gene75884.t1 |
chr2.1 | exon | 43355910 | 43356140 | 43355910 | ID=MS.gene75884.t1.exon2;Parent=MS.gene75884.t1 |
chr2.1 | CDS | 43355910 | 43356140 | 43355910 | ID=cds.MS.gene75884.t1;Parent=MS.gene75884.t1 |
chr2.1 | exon | 43353775 | 43354236 | 43353775 | ID=MS.gene75884.t1.exon3;Parent=MS.gene75884.t1 |
chr2.1 | CDS | 43353775 | 43354236 | 43353775 | ID=cds.MS.gene75884.t1;Parent=MS.gene75884.t1 |
chr2.1 | exon | 43352068 | 43353165 | 43352068 | ID=MS.gene75884.t1.exon4;Parent=MS.gene75884.t1 |
chr2.1 | CDS | 43352068 | 43353165 | 43352068 | ID=cds.MS.gene75884.t1;Parent=MS.gene75884.t1 |
Gene Sequence |
Protein sequence |