AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75884


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75884.t1 MTR_2g048340 94.144 666 31 2 1 664 1 660 0.0 1238
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75884.t1 AT5G58130 49.356 233 88 5 3 233 2 206 6.64e-61 217

Find 141 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGATCCTTTCAAGTTCT+TGG 0.115429 2.1:+43353783 None:intergenic
ACTGAACCAGAACATGATTT+TGG 0.178047 2.1:-43352942 MS.gene75884:CDS
GGTTCTTTAGCCGTTTGTTC+TGG 0.189946 2.1:+43352384 None:intergenic
GAGGACCAACTTTAATATTC+TGG 0.211960 2.1:+43354167 None:intergenic
TTCAGTTATCACTTGTTTAT+TGG 0.243733 2.1:+43352548 None:intergenic
AGAATATTCGTCGGAGGATT+AGG 0.284833 2.1:-43357126 MS.gene75884:CDS
TCGAAAACTGTTCGAATCAT+TGG 0.286085 2.1:-43357079 MS.gene75884:CDS
ATTGCTTTCACTTTCCGATT+TGG 0.294913 2.1:+43353043 None:intergenic
CATGATCCTTTCAAGTTCTT+GGG 0.298802 2.1:+43353784 None:intergenic
TTGCTTTCACTTTCCGATTT+GGG 0.304504 2.1:+43353044 None:intergenic
TTCGACTCATAAGGAGGATT+TGG 0.331025 2.1:-43355990 MS.gene75884:CDS
CGATCTGCAAATGTTGAAAT+AGG 0.332142 2.1:-43352174 MS.gene75884:CDS
ATGTTGGCATTGCAGTATAA+TGG 0.333790 2.1:-43356133 MS.gene75884:intron
GTCACGGATGGCTTCAACTT+AGG 0.337028 2.1:-43352291 MS.gene75884:CDS
GGAACCGGCAGGGTACAAAA+TGG 0.340357 2.1:+43352362 None:intergenic
TGGTACCTTACTGAAAAGTT+TGG 0.345165 2.1:+43356972 None:intergenic
TAACGAACCGTTCTTAATCT+TGG 0.345426 2.1:+43355902 None:intergenic
CTTCTAGATGGGCTGGGATC+TGG 0.347707 2.1:-43352975 MS.gene75884:CDS
CATGGTGGCAAAAGAAATCT+TGG 0.355436 2.1:-43352473 MS.gene75884:CDS
TCTACAAAGCGTCTTGCATT+AGG 0.359623 2.1:+43355956 None:intergenic
TCGAATGTCATCGGTGGTTA+CGG 0.365656 2.1:+43357098 None:intergenic
GGGAGTCTGCCAAAGTTTCA+TGG 0.367925 2.1:-43352920 MS.gene75884:CDS
AAAAGCTGTGAAAGGCTAAA+TGG 0.376894 2.1:+43352423 None:intergenic
ACGATCAAGGTAATGCTCTT+TGG 0.378575 2.1:+43356072 None:intergenic
CAGATCCCAGCCCATCTAGA+AGG 0.381344 2.1:+43352976 None:intergenic
ATGAGTGGGGAAGCAGAAAT+TGG 0.383018 2.1:-43354043 MS.gene75884:CDS
CTCTTCTATCACTCTTGTAT+TGG 0.388942 2.1:+43352632 None:intergenic
ATATTGAGAGGCTTTGCATC+TGG 0.390081 2.1:+43355932 None:intergenic
AAAGCTAAAGCTGCTGTTAG+TGG 0.395152 2.1:-43352102 MS.gene75884:CDS
TGTTATTCTCATTAGCCAAC+TGG 0.398795 2.1:+43352448 None:intergenic
TTCTTTGATCATTTGTGTAT+TGG 0.401907 2.1:+43352674 None:intergenic
AGGATAAGTTATCTATGAAT+GGG 0.402189 2.1:-43354090 MS.gene75884:CDS
GTTCTTTAGCCGTTTGTTCT+GGG 0.404623 2.1:+43352385 None:intergenic
AAAATGCAGACCCTTCTAGA+TGG 0.405551 2.1:-43352987 MS.gene75884:CDS
GTTTCTAACACCAAGCATCT+TGG 0.410072 2.1:-43353953 MS.gene75884:CDS
GAGAAAATCACTTCCCAAAT+CGG 0.411171 2.1:-43353057 MS.gene75884:CDS
TCACGGATGGCTTCAACTTA+GGG 0.412683 2.1:-43352290 MS.gene75884:CDS
TCCATACCCTTCAGTGGAAC+TGG 0.413684 2.1:-43354208 MS.gene75884:CDS
GACTCCCCAAAATCATGTTC+TGG 0.414624 2.1:+43352936 None:intergenic
AAGGATAAGTTATCTATGAA+TGG 0.419930 2.1:-43354091 MS.gene75884:CDS
AACGAACCGTTCTTAATCTT+GGG 0.421343 2.1:+43355903 None:intergenic
CGAAAACTGTTCGAATCATT+GGG 0.426176 2.1:-43357078 MS.gene75884:CDS
AAACGCAGTGAGAAGAAGTA+AGG 0.432186 2.1:-43352066 None:intergenic
TGTTGGCATTGCAGTATAAT+GGG 0.433137 2.1:-43356132 MS.gene75884:intron
GTTATCACTTGTTTATTGGT+AGG 0.438837 2.1:+43352552 None:intergenic
TCCAGTGAGTGCAAGCATAA+TGG 0.439320 2.1:-43352342 MS.gene75884:CDS
TCTATCACTCTTGTATTGGT+AGG 0.441895 2.1:+43352636 None:intergenic
CTTCTGAGACCATGAAACTT+TGG 0.442387 2.1:+43352911 None:intergenic
GCAGACCCTTCTAGATGGGC+TGG 0.447267 2.1:-43352982 MS.gene75884:CDS
ATGCTTGCACTCACTGGAAC+CGG 0.452300 2.1:+43352347 None:intergenic
AATCGGAAAGTGAAAGCAAT+GGG 0.455057 2.1:-43353040 MS.gene75884:CDS
TTCTTCTATCACCTGTGCAT+TGG 0.455540 2.1:+43352590 None:intergenic
TGAAAGGATCATGGAAAGTC+AGG 0.458480 2.1:-43353774 MS.gene75884:intron
GTAAGCGAGACTGCGACCTT+TGG 0.460541 2.1:+43357026 None:intergenic
GCTGATAAGAATACTATTGA+TGG 0.461820 2.1:-43352318 MS.gene75884:CDS
TTCTGATGTTTCGACTCATA+AGG 0.462618 2.1:-43355999 MS.gene75884:CDS
TAACTGGCACAGGTGTTTCA+TGG 0.468662 2.1:-43352491 MS.gene75884:CDS
CTTACTGAAAAGTTTGGAAA+GGG 0.474134 2.1:+43356978 None:intergenic
TTGGTAGGTTGAGCTTCAGC+AGG 0.477986 2.1:+43352567 None:intergenic
ACCATTATGCTTGCACTCAC+TGG 0.478496 2.1:+43352341 None:intergenic
GTGCTTCTTTCCAAGATGCT+TGG 0.478695 2.1:+43353943 None:intergenic
ACATTTGCAGATCGTTCCCT+TGG 0.482594 2.1:+43352183 None:intergenic
CCAGCATGCTCACTATGTTC+TGG 0.483255 2.1:+43352258 None:intergenic
TGTATTGGTAGGTTGAGATT+CGG 0.494596 2.1:+43352689 None:intergenic
AAGTTATGCTGAGTTTCAGC+AGG 0.496289 2.1:+43352525 None:intergenic
TAGAATCAGCAAGGAAATCA+AGG 0.497334 2.1:+43357004 None:intergenic
TATGAATGGGGAAACTGAAA+GGG 0.498569 2.1:-43354077 MS.gene75884:CDS
CTATGAATGGGGAAACTGAA+AGG 0.499445 2.1:-43354078 MS.gene75884:CDS
CATTAGTTTCCCAGAACAAA+CGG 0.500069 2.1:-43352394 MS.gene75884:CDS
AGTTTCATCGTTTGTAGAAG+AGG 0.502622 2.1:+43352773 None:intergenic
TGGAGAGAACTTGTTGGTAA+AGG 0.503479 2.1:-43352882 MS.gene75884:CDS
TAAAACAAATATTGCGGAGG+AGG 0.509192 2.1:-43353132 MS.gene75884:CDS
ACCAGTTCCACTGAAGGGTA+TGG 0.509579 2.1:+43354207 None:intergenic
GAACCGGCAGGGTACAAAAT+GGG 0.513709 2.1:+43352363 None:intergenic
TTGATCATTTGTGTATTGGT+AGG 0.513749 2.1:+43352678 None:intergenic
TCTATCACCTGTGCATTGGT+AGG 0.514259 2.1:+43352594 None:intergenic
GTGCTGATTCTTTGAAAGAG+TGG 0.514505 2.1:-43352128 MS.gene75884:CDS
AGTTTCCAGAATATTAAAGT+TGG 0.515602 2.1:-43354172 MS.gene75884:CDS
CCAAGAACTTGAAAGGATCA+TGG 0.517434 2.1:-43353783 MS.gene75884:CDS
AATGGGTGTGTGTGGAAAGG+TGG 0.524128 2.1:-43356115 MS.gene75884:CDS
TGGAAAGCTGAAACTTGAAA+AGG 0.537493 2.1:-43356095 MS.gene75884:CDS
CAGACCCTTCTAGATGGGCT+GGG 0.539526 2.1:-43352981 MS.gene75884:CDS
TCTTCGTGGAGAGAACTTGT+TGG 0.539823 2.1:-43352888 MS.gene75884:CDS
TTGCACTCACTGGAACCGGC+AGG 0.540369 2.1:+43352351 None:intergenic
TGCTTACCAGTTCCACTGAA+GGG 0.542059 2.1:+43354202 None:intergenic
GGGAAAAGTTATCTATGAGT+GGG 0.542933 2.1:-43354057 MS.gene75884:CDS
AAATCATGTTCTGGTTCAGT+AGG 0.544746 2.1:+43352945 None:intergenic
TCATAAGGAGGATTTGGTAA+AGG 0.545638 2.1:-43355984 MS.gene75884:CDS
ACTGCGACCTTTGGTACGAA+TGG 0.551310 2.1:+43357035 None:intergenic
CCTTACTGAAAAGTTTGGAA+AGG 0.551504 2.1:+43356977 None:intergenic
CATGGTCTCAGAAGTCTTCG+TGG 0.551938 2.1:-43352902 MS.gene75884:CDS
ATCTCTGCCTACCAATGCAC+AGG 0.554099 2.1:-43352601 MS.gene75884:CDS
TGTTCTGGGAAACTAATGTC+AGG 0.556549 2.1:+43352399 None:intergenic
AGTGGGGAAGCAGAAATTGG+TGG 0.558375 2.1:-43354040 MS.gene75884:CDS
TTGGTAGGTTGAGATTCGGC+AGG 0.560339 2.1:+43352693 None:intergenic
GAAGATCAGCAAAACTCTCA+TGG 0.564997 2.1:-43352807 MS.gene75884:CDS
CAGGGACCCAAGAACTTGAA+AGG 0.565422 2.1:-43353790 MS.gene75884:CDS
GTGCTTACCAGTTCCACTGA+AGG 0.566725 2.1:+43354201 None:intergenic
AAATGCAGACCCTTCTAGAT+GGG 0.570793 2.1:-43352986 MS.gene75884:CDS
GTTATTCTCATTAGCCAACT+GGG 0.572106 2.1:+43352449 None:intergenic
AAATCGTTGAAACAAGTCCA+AGG 0.574551 2.1:-43352200 MS.gene75884:CDS
AACGCAGTGAGAAGAAGTAA+GGG 0.581748 2.1:-43352065 None:intergenic
CTTGGGAAGTAAATATTGAG+AGG 0.582694 2.1:+43355920 None:intergenic
TGAGTCGAAACATCAGAAGC+TGG 0.586957 2.1:+43356004 None:intergenic
TACTATTGATGGAACTGTCA+CGG 0.590070 2.1:-43352307 MS.gene75884:CDS
AGGGAAAAGTTATCTATGAG+TGG 0.590439 2.1:-43354058 MS.gene75884:CDS
TGCAGTATAATGGGTGTGTG+TGG 0.590559 2.1:-43356123 MS.gene75884:intron
TGCACTCACTGGAACCGGCA+GGG 0.590957 2.1:+43352352 None:intergenic
TTACTTCCCAAGATTAAGAA+CGG 0.593171 2.1:-43355909 MS.gene75884:intron
AAACGATGAAACTGAAGACA+TGG 0.593297 2.1:-43352763 MS.gene75884:CDS
CTCGAAACCATTCGTACCAA+AGG 0.593811 2.1:-43357042 MS.gene75884:CDS
AGATCCCAGCCCATCTAGAA+GGG 0.593994 2.1:+43352977 None:intergenic
AAAGAAATCTTGGACCCAGT+TGG 0.595933 2.1:-43352463 MS.gene75884:CDS
GTCCAATAAAACAAATATTG+CGG 0.596702 2.1:-43353138 MS.gene75884:CDS
TGTCAGGCAAAAGCTGTGAA+AGG 0.600136 2.1:+43352415 None:intergenic
TGGAGCAGAAACTATATCAT+CGG 0.601162 2.1:+43352233 None:intergenic
TTGGTAGGCAGAGATTCAGC+AGG 0.605263 2.1:+43352609 None:intergenic
AGAGAACTTGTTGGTAAAGG+AGG 0.605841 2.1:-43352879 MS.gene75884:CDS
GAGCAAGAGCGATTCTAGCA+AGG 0.611834 2.1:-43353087 MS.gene75884:CDS
CACGGATGGCTTCAACTTAG+GGG 0.616972 2.1:-43352289 MS.gene75884:CDS
AGAGCAGTGAGAATATTCGT+CGG 0.618455 2.1:-43357135 MS.gene75884:CDS
AAATCGGAAAGTGAAAGCAA+TGG 0.618747 2.1:-43353041 MS.gene75884:CDS
GTAGATAGTGCAACAGATGA+TGG 0.626664 2.1:-43353875 MS.gene75884:CDS
GGATAAGTTATCTATGAATG+GGG 0.627287 2.1:-43354089 MS.gene75884:CDS
ATTGATGGAACTGTCACGGA+TGG 0.628129 2.1:-43352303 MS.gene75884:CDS
TGATGTTTCGACTCATAAGG+AGG 0.628597 2.1:-43355996 MS.gene75884:CDS
TCTTCAGCAGTATCAAACTT+CGG 0.628677 2.1:+43352825 None:intergenic
AAAGGGATTTAGAATCAGCA+AGG 0.632981 2.1:+43356995 None:intergenic
AAAACAAAGCAGCTTTGACA+GGG 0.636062 2.1:-43353808 MS.gene75884:CDS
AATCGTTGAAACAAGTCCAA+GGG 0.636458 2.1:-43352199 MS.gene75884:CDS
TATAATGGGTGTGTGTGGAA+AGG 0.637628 2.1:-43356118 MS.gene75884:CDS
GTTAAATCCATACCCTTCAG+TGG 0.639356 2.1:-43354214 MS.gene75884:CDS
GGAAAAGTTATCTATGAGTG+GGG 0.649648 2.1:-43354056 MS.gene75884:CDS
CAATAAAACAAATATTGCGG+AGG 0.654109 2.1:-43353135 MS.gene75884:CDS
CCAGAACATAGTGAGCATGC+TGG 0.659717 2.1:-43352258 MS.gene75884:CDS
GTTGCGTCTAGTACCCCTGT+AGG 0.660935 2.1:-43353017 MS.gene75884:CDS
AAACTTCGGCAATATGAGAG+AGG 0.671206 2.1:+43352839 None:intergenic
GCAGTGAGAATATTCGTCGG+AGG 0.687502 2.1:-43357132 MS.gene75884:CDS
CTGGCACAGGTGTTTCATGG+TGG 0.696551 2.1:-43352488 MS.gene75884:CDS
GTCGAAACATCAGAAGCTGG+TGG 0.697024 2.1:+43356007 None:intergenic
ATCGGAAAGTGAAAGCAATG+GGG 0.734526 2.1:-43353039 MS.gene75884:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAATAGAATTAATTTA+AGG + chr2.1:43353047-43353066 None:intergenic 10.0%
!! AGAAAATAGAATTAATTTAA+GGG + chr2.1:43353046-43353065 None:intergenic 10.0%
!! ATAAAATAATAAAAATGTGA+CGG + chr2.1:43352585-43352604 None:intergenic 10.0%
!! AAATAAATAAATGAGTAAAC+AGG + chr2.1:43353360-43353379 None:intergenic 15.0%
!! AAATCTGTATAATTAAACAA+TGG + chr2.1:43354915-43354934 None:intergenic 15.0%
!! AATAAATTTACTTAATCTGA+AGG - chr2.1:43354087-43354106 MS.gene75884:CDS 15.0%
!! ATAAATTTACTTAATCTGAA+GGG - chr2.1:43354088-43354107 MS.gene75884:CDS 15.0%
!! TTTAAAAGTAATGATTATGT+TGG - chr2.1:43353078-43353097 MS.gene75884:CDS 15.0%
!!! ATTTATTTTGTTATTCGTTA+CGG + chr2.1:43354074-43354093 None:intergenic 15.0%
!!! ATTTTTTTCTCAACAAATTA+AGG + chr2.1:43354583-43354602 None:intergenic 15.0%
!!! CATTTATTTTTTATTTGGAA+GGG - chr2.1:43355488-43355507 MS.gene75884:intron 15.0%
!!! CGTATCATTTATTTTTTATT+TGG - chr2.1:43355483-43355502 MS.gene75884:intron 15.0%
!!! GTTCAAATAAATATAGTTTT+AGG - chr2.1:43355774-43355793 MS.gene75884:intron 15.0%
!!! TCATTTATTTTTTATTTGGA+AGG - chr2.1:43355487-43355506 MS.gene75884:intron 15.0%
!!! TTTTTTTCTCAACAAATTAA+GGG + chr2.1:43354582-43354601 None:intergenic 15.0%
!! CAAAATTTAGAAAATAGGAA+AGG - chr2.1:43353868-43353887 MS.gene75884:CDS 20.0%
!! GTACACAAAATTTAGAAAAT+AGG - chr2.1:43353863-43353882 MS.gene75884:CDS 20.0%
!! TAAATTTACTTAATCTGAAG+GGG - chr2.1:43354089-43354108 MS.gene75884:CDS 20.0%
!! TAGAATTAATTTAAGGGTTT+AGG + chr2.1:43353040-43353059 None:intergenic 20.0%
!! TGTTAACTTAATCAAAATCA+AGG + chr2.1:43353821-43353840 None:intergenic 20.0%
!! TTGATTACAAAAGTCTATTT+AGG - chr2.1:43354706-43354725 MS.gene75884:intron 20.0%
!! TTTGTATACAAAACAAAACT+AGG + chr2.1:43355747-43355766 None:intergenic 20.0%
!!! GATTACTTTTATCAAAGAAT+AGG - chr2.1:43356020-43356039 MS.gene75884:CDS 20.0%
!!! TTTATTGTTTTTGCTATTTG+TGG - chr2.1:43353400-43353419 MS.gene75884:intron 20.0%
!!! TTTATTTTGTTATTCGTTAC+GGG + chr2.1:43354073-43354092 None:intergenic 20.0%
! AAATTGTAGTGTTTGTGAAA+AGG - chr2.1:43354793-43354812 MS.gene75884:intron 25.0%
! AAGGATAAGTTATCTATGAA+TGG - chr2.1:43355136-43355155 MS.gene75884:intron 25.0%
! AATGAGTAAACAGGTTATAA+TGG + chr2.1:43353351-43353370 None:intergenic 25.0%
! AATTGTAGTGTTTGTGAAAA+GGG - chr2.1:43354794-43354813 MS.gene75884:intron 25.0%
! ACACTTGGTTGATTAATTAA+GGG + chr2.1:43354664-43354683 None:intergenic 25.0%
! AGGATAAGTTATCTATGAAT+GGG - chr2.1:43355137-43355156 MS.gene75884:intron 25.0%
! AGTATATTAAGAGAAGTAGA+TGG + chr2.1:43354766-43354785 None:intergenic 25.0%
! AGTTTCCAGAATATTAAAGT+TGG - chr2.1:43355055-43355074 MS.gene75884:intron 25.0%
! ATATGAATTAAGAGTCAGTT+TGG - chr2.1:43352830-43352849 MS.gene75884:CDS 25.0%
! GAATTATGGTTAGATAACAT+AGG - chr2.1:43353766-43353785 MS.gene75884:intron 25.0%
! GTCCAATAAAACAAATATTG+CGG - chr2.1:43356089-43356108 MS.gene75884:CDS 25.0%
! TAGTTAAAACAACAGCTTAT+AGG - chr2.1:43352526-43352545 MS.gene75884:CDS 25.0%
! TGATCGTTTGAAAAAAGAAT+GGG - chr2.1:43353171-43353190 MS.gene75884:intron 25.0%
! TGTTATCTAACCATAATTCT+CGG + chr2.1:43353765-43353784 None:intergenic 25.0%
! TTAGTTACATTTCCTGAATA+AGG + chr2.1:43354525-43354544 None:intergenic 25.0%
! TTCAGTTATCACTTGTTTAT+TGG + chr2.1:43356682-43356701 None:intergenic 25.0%
! TTCTTTGATCATTTGTGTAT+TGG + chr2.1:43356556-43356575 None:intergenic 25.0%
! TTGATCGTTTGAAAAAAGAA+TGG - chr2.1:43353170-43353189 MS.gene75884:intron 25.0%
! TTGCATTGCATAATATAATC+AGG - chr2.1:43354117-43354136 MS.gene75884:CDS 25.0%
!! CTTTTATATTGTGATGAGAT+AGG - chr2.1:43353447-43353466 MS.gene75884:intron 25.0%
!! GCATAAGTTTTTATAGCTTA+TGG - chr2.1:43352976-43352995 MS.gene75884:CDS 25.0%
!! GTATAATGTCATTTGAAAAG+TGG + chr2.1:43354622-43354641 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAAGA+GGG - chr2.1:43353014-43353033 MS.gene75884:CDS 25.0%
!!! AGAATGATTTTGGAATGATT+AGG - chr2.1:43353634-43353653 MS.gene75884:intron 25.0%
!!! ATTCTTTTTTCAAACGATCA+AGG + chr2.1:43353171-43353190 None:intergenic 25.0%
!!! GAATGATTTTGGAATGATTA+GGG - chr2.1:43353635-43353654 MS.gene75884:intron 25.0%
!!! TTATCCTTTTTTGCGATAAA+AGG + chr2.1:43355124-43355143 None:intergenic 25.0%
!!! TTATTTTGTTATTCGTTACG+GGG + chr2.1:43354072-43354091 None:intergenic 25.0%
!!! TTATTTTTTATTTGGAAGGG+AGG - chr2.1:43355491-43355510 MS.gene75884:intron 25.0%
AAAATAGTGTAGAGAACAAG+TGG - chr2.1:43353675-43353694 MS.gene75884:intron 30.0%
AAATGCACTATTTCCAAGAA+AGG - chr2.1:43354842-43354861 MS.gene75884:intron 30.0%
AACTTAGCACCAAAAATAAC+TGG - chr2.1:43356720-43356739 MS.gene75884:intron 30.0%
AGTTACAAGAAAAGCCTTAA+AGG + chr2.1:43354479-43354498 None:intergenic 30.0%
ATACGAATTAAGACTCAGTT+TGG - chr2.1:43352717-43352736 MS.gene75884:CDS 30.0%
ATATTGTGATGAGATAGGTT+TGG - chr2.1:43353452-43353471 MS.gene75884:intron 30.0%
ATTATATTAGCCCAGAATGT+AGG - chr2.1:43354442-43354461 MS.gene75884:intron 30.0%
CAAGCTTCTTGAAAAAGAAA+AGG - chr2.1:43355252-43355271 MS.gene75884:intron 30.0%
CAATAAAACAAATATTGCGG+AGG - chr2.1:43356092-43356111 MS.gene75884:CDS 30.0%
CTTACTGAAAAGTTTGGAAA+GGG + chr2.1:43352252-43352271 None:intergenic 30.0%
GAAAGAGGTCAAAAGATTTA+GGG + chr2.1:43354560-43354579 None:intergenic 30.0%
GACACTTGGTTGATTAATTA+AGG + chr2.1:43354665-43354684 None:intergenic 30.0%
GATTAAGTTAACACTGCATA+TGG - chr2.1:43353828-43353847 MS.gene75884:CDS 30.0%
GCGGTTAAATATCAATGATA+CGG - chr2.1:43353527-43353546 MS.gene75884:intron 30.0%
GCTGATAAGAATACTATTGA+TGG - chr2.1:43356909-43356928 MS.gene75884:intron 30.0%
GGATAAGTTATCTATGAATG+GGG - chr2.1:43355138-43355157 MS.gene75884:intron 30.0%
GTTATCACTTGTTTATTGGT+AGG + chr2.1:43356678-43356697 None:intergenic 30.0%
TACATTGTCAAAACAGCATA+AGG + chr2.1:43352811-43352830 None:intergenic 30.0%
TGACACTAACACTTAACAAA+GGG + chr2.1:43356000-43356019 None:intergenic 30.0%
TGATATATTGCAGGTATTTG+CGG - chr2.1:43353508-43353527 MS.gene75884:intron 30.0%
TGTTAAAAAGCTGTTTAGCT+AGG - chr2.1:43355626-43355645 MS.gene75884:intron 30.0%
TTAAGTGAAGTGAGAAAGAT+TGG + chr2.1:43352278-43352297 None:intergenic 30.0%
TTACTTCCCAAGATTAAGAA+CGG - chr2.1:43353318-43353337 MS.gene75884:intron 30.0%
TTATATTAGCCCAGAATGTA+GGG - chr2.1:43354443-43354462 MS.gene75884:intron 30.0%
TTATGGATAGTAGTTGTGAT+CGG - chr2.1:43353606-43353625 MS.gene75884:intron 30.0%
! ACGTTTAGAGCTTATTTGAT+TGG + chr2.1:43355927-43355946 None:intergenic 30.0%
! ATACATGTGACTTTAGAAGT+TGG - chr2.1:43352615-43352634 MS.gene75884:CDS 30.0%
! ATATCAAGGTGTATAGGTTT+TGG + chr2.1:43354328-43354347 None:intergenic 30.0%
! GTTAAGTTGTTTATCCAAAG+AGG - chr2.1:43353013-43353032 MS.gene75884:CDS 30.0%
! GTTTTTCTTTGTTGCAATGT+TGG + chr2.1:43355404-43355423 None:intergenic 30.0%
! TCATAAGTTTTCCTAGCTTA+CGG + chr2.1:43352892-43352911 None:intergenic 30.0%
! TGTTTTCAATCCAAAACTCT+TGG + chr2.1:43354221-43354240 None:intergenic 30.0%
! TTGATCATTTGTGTATTGGT+AGG + chr2.1:43356552-43356571 None:intergenic 30.0%
!! AGGAGCATTTATACACAAAA+GGG - chr2.1:43354726-43354745 MS.gene75884:intron 30.0%
!! CTTGTTTTCATAAGCTCTTT+AGG - chr2.1:43352498-43352517 MS.gene75884:CDS 30.0%
!! TAGAGAGTATCAATCATTAC+TGG + chr2.1:43354248-43354267 None:intergenic 30.0%
!! TAGGAGCATTTATACACAAA+AGG - chr2.1:43354725-43354744 MS.gene75884:intron 30.0%
!!! ACTACATCTGTTTTAATTGG+TGG - chr2.1:43354191-43354210 MS.gene75884:CDS 30.0%
!!! AGCACTACATCTGTTTTAAT+TGG - chr2.1:43354188-43354207 MS.gene75884:CDS 30.0%
!!! AGTAAATTCAGGTTGGTTTT+TGG - chr2.1:43355515-43355534 MS.gene75884:intron 30.0%
!!! CTAGTTCGTTGTGTTTTTTA+AGG + chr2.1:43355851-43355870 None:intergenic 30.0%
!!! CTCCGCAATATTTGTTTTAT+TGG + chr2.1:43356094-43356113 None:intergenic 30.0%
!!! GAATGACGATTTTGATTGAT+TGG - chr2.1:43352664-43352683 MS.gene75884:CDS 30.0%
!!! GTAAATTCAGGTTGGTTTTT+GGG - chr2.1:43355516-43355535 MS.gene75884:intron 30.0%
AAAAGCTGTGAAAGGCTAAA+TGG + chr2.1:43356807-43356826 None:intergenic 35.0%
AAACGATGAAACTGAAGACA+TGG - chr2.1:43356464-43356483 MS.gene75884:intron 35.0%
AAATCGGAAAGTGAAAGCAA+TGG - chr2.1:43356186-43356205 MS.gene75884:intron 35.0%
AAATCGTTGAAACAAGTCCA+AGG - chr2.1:43357027-43357046 MS.gene75884:CDS 35.0%
AACCTATACACCTTGATATG+TGG - chr2.1:43354329-43354348 MS.gene75884:intron 35.0%
AACGAACCGTTCTTAATCTT+GGG + chr2.1:43353327-43353346 None:intergenic 35.0%
AATCGGAAAGTGAAAGCAAT+GGG - chr2.1:43356187-43356206 MS.gene75884:intron 35.0%
AATCGTTGAAACAAGTCCAA+GGG - chr2.1:43357028-43357047 MS.gene75884:CDS 35.0%
AATGGAAATGCTAACATGTG+AGG + chr2.1:43354897-43354916 None:intergenic 35.0%
ACTACCTTATCAGCTAGTTA+TGG + chr2.1:43355550-43355569 None:intergenic 35.0%
AGATGTAGTGCTTTCAATCA+TGG + chr2.1:43354180-43354199 None:intergenic 35.0%
AGGATATTGGGAATAGTTTG+AGG - chr2.1:43353703-43353722 MS.gene75884:intron 35.0%
AGGGAAAAGTTATCTATGAG+TGG - chr2.1:43355169-43355188 MS.gene75884:intron 35.0%
AGGGAGATATTTGACCTTTA+AGG - chr2.1:43354462-43354481 MS.gene75884:intron 35.0%
AGTTTCATCGTTTGTAGAAG+AGG + chr2.1:43356457-43356476 None:intergenic 35.0%
ATAATTCGTGCCACATATCA+AGG + chr2.1:43354342-43354361 None:intergenic 35.0%
ATGGAAATGCTAACATGTGA+GGG + chr2.1:43354896-43354915 None:intergenic 35.0%
ATGTTGGCATTGCAGTATAA+TGG - chr2.1:43353094-43353113 MS.gene75884:CDS 35.0%
ATTGCTTTCACTTTCCGATT+TGG + chr2.1:43356187-43356206 None:intergenic 35.0%
CAAATATCTCCCTACATTCT+GGG + chr2.1:43354455-43354474 None:intergenic 35.0%
CAAGAAAGGATTTCCACATT+GGG - chr2.1:43354856-43354875 MS.gene75884:intron 35.0%
CACAATCACAAAAATGCACA+GGG + chr2.1:43355087-43355106 None:intergenic 35.0%
CATAGTAGAACCGAGAATTA+TGG - chr2.1:43353752-43353771 MS.gene75884:intron 35.0%
CATCAAAAGCCTTGACATTA+AGG - chr2.1:43353571-43353590 MS.gene75884:intron 35.0%
CCTTACTGAAAAGTTTGGAA+AGG + chr2.1:43352253-43352272 None:intergenic 35.0%
CGAAAACTGTTCGAATCATT+GGG - chr2.1:43352149-43352168 MS.gene75884:CDS 35.0%
CGATCTGCAAATGTTGAAAT+AGG - chr2.1:43357053-43357072 MS.gene75884:CDS 35.0%
CTCAACAAATTAAGGGAAAG+AGG + chr2.1:43354575-43354594 None:intergenic 35.0%
CTCTTCTATCACTCTTGTAT+TGG + chr2.1:43356598-43356617 None:intergenic 35.0%
CTGACACTAACACTTAACAA+AGG + chr2.1:43356001-43356020 None:intergenic 35.0%
CTTGGGAAGTAAATATTGAG+AGG + chr2.1:43353310-43353329 None:intergenic 35.0%
GAAAATAGGAAAGGAAACCA+TGG - chr2.1:43353877-43353896 MS.gene75884:CDS 35.0%
GAGAAAATCACTTCCCAAAT+CGG - chr2.1:43356170-43356189 MS.gene75884:intron 35.0%
GAGGACCAACTTTAATATTC+TGG + chr2.1:43355063-43355082 None:intergenic 35.0%
GCTATTTGTGGAAAAGTCTA+TGG - chr2.1:43353412-43353431 MS.gene75884:intron 35.0%
GGAAAAGTTATCTATGAGTG+GGG - chr2.1:43355171-43355190 MS.gene75884:intron 35.0%
GGAAAGAGGTCAAAAGATTT+AGG + chr2.1:43354561-43354580 None:intergenic 35.0%
GGATATTGGGAATAGTTTGA+GGG - chr2.1:43353704-43353723 MS.gene75884:intron 35.0%
GGGAAAAGTTATCTATGAGT+GGG - chr2.1:43355170-43355189 MS.gene75884:intron 35.0%
GTCAAAAGATTTAGGGATAG+AGG + chr2.1:43354553-43354572 None:intergenic 35.0%
GTTATTCTCATTAGCCAACT+GGG + chr2.1:43356781-43356800 None:intergenic 35.0%
TAAAACAAATATTGCGGAGG+AGG - chr2.1:43356095-43356114 MS.gene75884:CDS 35.0%
TAACGAACCGTTCTTAATCT+TGG + chr2.1:43353328-43353347 None:intergenic 35.0%
TACTATTGATGGAACTGTCA+CGG - chr2.1:43356920-43356939 MS.gene75884:intron 35.0%
TAGAATCAGCAAGGAAATCA+AGG + chr2.1:43352226-43352245 None:intergenic 35.0%
TATGAATGGGGAAACTGAAA+GGG - chr2.1:43355150-43355169 MS.gene75884:intron 35.0%
TATGGATAGTAGTTGTGATC+GGG - chr2.1:43353607-43353626 MS.gene75884:intron 35.0%
TCAAATATCTCCCTACATTC+TGG + chr2.1:43354456-43354475 None:intergenic 35.0%
TCACAATCACAAAAATGCAC+AGG + chr2.1:43355088-43355107 None:intergenic 35.0%
TCCGCAGATAAACTCAAATA+AGG + chr2.1:43352436-43352455 None:intergenic 35.0%
TCGAAAACTGTTCGAATCAT+TGG - chr2.1:43352148-43352167 MS.gene75884:CDS 35.0%
TCGTAAACCAAACGAATTTG+CGG - chr2.1:43353984-43354003 MS.gene75884:CDS 35.0%
TCTTCAGCAGTATCAAACTT+CGG + chr2.1:43356405-43356424 None:intergenic 35.0%
TGAAAAGTGGCTTACACTAA+GGG + chr2.1:43354609-43354628 None:intergenic 35.0%
TGCGATTCTTGATATATTGC+AGG - chr2.1:43353499-43353518 MS.gene75884:intron 35.0%
TGGAAAGCTGAAACTTGAAA+AGG - chr2.1:43353132-43353151 MS.gene75884:CDS 35.0%
TGGAGCAGAAACTATATCAT+CGG + chr2.1:43356997-43357016 None:intergenic 35.0%
TGGTACCTTACTGAAAAGTT+TGG + chr2.1:43352258-43352277 None:intergenic 35.0%
TGTTATTCTCATTAGCCAAC+TGG + chr2.1:43356782-43356801 None:intergenic 35.0%
TGTTGGCATTGCAGTATAAT+GGG - chr2.1:43353095-43353114 MS.gene75884:CDS 35.0%
TTATCTTGATTCCGTAAGCT+AGG - chr2.1:43352878-43352897 MS.gene75884:CDS 35.0%
TTCTGATGTTTCGACTCATA+AGG - chr2.1:43353228-43353247 MS.gene75884:intron 35.0%
TTGAAAAGTGGCTTACACTA+AGG + chr2.1:43354610-43354629 None:intergenic 35.0%
TTGCTTTCACTTTCCGATTT+GGG + chr2.1:43356186-43356205 None:intergenic 35.0%
TTTCAATCCAAAACTCTTGG+AGG + chr2.1:43354218-43354237 None:intergenic 35.0%
TTTGCCATAACTAGCTGATA+AGG - chr2.1:43355543-43355562 MS.gene75884:intron 35.0%
! AAAAACAAAGCAGCTTTGAC+AGG - chr2.1:43355418-43355437 MS.gene75884:intron 35.0%
! AAAACAAAGCAGCTTTGACA+GGG - chr2.1:43355419-43355438 MS.gene75884:intron 35.0%
! AAAGGGATTTAGAATCAGCA+AGG + chr2.1:43352235-43352254 None:intergenic 35.0%
! ACTGAACCAGAACATGATTT+TGG - chr2.1:43356285-43356304 MS.gene75884:intron 35.0%
! CAGTCCTTTTATCGCAAAAA+AGG - chr2.1:43355117-43355136 MS.gene75884:intron 35.0%
! CATTAGTTTCCCAGAACAAA+CGG - chr2.1:43356833-43356852 MS.gene75884:intron 35.0%
! CCTTTCCAAACTTTTCAGTA+AGG - chr2.1:43352250-43352269 MS.gene75884:CDS 35.0%
! CTGAACCAGAACATGATTTT+GGG - chr2.1:43356286-43356305 MS.gene75884:intron 35.0%
! GAACAGTTTTCGAATGTCAT+CGG + chr2.1:43352141-43352160 None:intergenic 35.0%
! GGAATGATTAGGGTTTTCTA+GGG - chr2.1:43353645-43353664 MS.gene75884:intron 35.0%
! TCAACGATTTTCTCAACTAC+TGG + chr2.1:43357017-43357036 None:intergenic 35.0%
! TCATAAGGAGGATTTGGTAA+AGG - chr2.1:43353243-43353262 MS.gene75884:intron 35.0%
! TCTATCACTCTTGTATTGGT+AGG + chr2.1:43356594-43356613 None:intergenic 35.0%
! TGAACCAGAACATGATTTTG+GGG - chr2.1:43356287-43356306 MS.gene75884:intron 35.0%
! TGGAATGATTAGGGTTTTCT+AGG - chr2.1:43353644-43353663 MS.gene75884:intron 35.0%
! TGGTTTACGATAGAGCATTA+TGG + chr2.1:43353974-43353993 None:intergenic 35.0%
! TGTATTGGTAGGTTGAGATT+CGG + chr2.1:43356541-43356560 None:intergenic 35.0%
! TGTGCATTTTTGTGATTGTG+AGG - chr2.1:43355087-43355106 MS.gene75884:intron 35.0%
!! AAATCATGTTCTGGTTCAGT+AGG + chr2.1:43356285-43356304 None:intergenic 35.0%
!! ACAAGTGGATTGAAGGATAT+TGG - chr2.1:43353690-43353709 MS.gene75884:intron 35.0%
!! CAAGTGGATTGAAGGATATT+GGG - chr2.1:43353691-43353710 MS.gene75884:intron 35.0%
!! CATGATCCTTTCAAGTTCTT+GGG + chr2.1:43355446-43355465 None:intergenic 35.0%
!! GAGAATTTTTGAGAGAGCTA+TGG - chr2.1:43352780-43352799 MS.gene75884:CDS 35.0%
!! GCCTTATTTGAGTTTATCTG+CGG - chr2.1:43352432-43352451 MS.gene75884:CDS 35.0%
AAAATGCAGACCCTTCTAGA+TGG - chr2.1:43356240-43356259 MS.gene75884:intron 40.0%
AAACACCTACGAGACTGTTT+GGG - chr2.1:43352459-43352478 MS.gene75884:CDS 40.0%
AAACTTCGGCAATATGAGAG+AGG + chr2.1:43356391-43356410 None:intergenic 40.0%
AAAGAAATCTTGGACCCAGT+TGG - chr2.1:43356764-43356783 MS.gene75884:intron 40.0%
AAAGCTAAAGCTGCTGTTAG+TGG - chr2.1:43357125-43357144 MS.gene75884:CDS 40.0%
AAATGCAGACCCTTCTAGAT+GGG - chr2.1:43356241-43356260 MS.gene75884:intron 40.0%
AACCCATTGAAGCGCAAAAA+AGG - chr2.1:43356118-43356137 MS.gene75884:CDS 40.0%
AAGTTATGCTGAGTTTCAGC+AGG + chr2.1:43356705-43356724 None:intergenic 40.0%
ACATGTTAAGGAACCCAATG+TGG + chr2.1:43354872-43354891 None:intergenic 40.0%
ACGAATTATTGTGTAGCGCT+AGG - chr2.1:43354353-43354372 MS.gene75884:intron 40.0%
ACGATCAAGGTAATGCTCTT+TGG + chr2.1:43353158-43353177 None:intergenic 40.0%
ACTATCCATAACTGTGATCG+TGG + chr2.1:43353597-43353616 None:intergenic 40.0%
AGAATATTCGTCGGAGGATT+AGG - chr2.1:43352101-43352120 MS.gene75884:CDS 40.0%
AGAGCAGTGAGAATATTCGT+CGG - chr2.1:43352092-43352111 MS.gene75884:CDS 40.0%
ATAAGGATGCAGTTAGCAAG+AGG + chr2.1:43354508-43354527 None:intergenic 40.0%
ATATTGAGAGGCTTTGCATC+TGG + chr2.1:43353298-43353317 None:intergenic 40.0%
ATCGGAAAGTGAAAGCAATG+GGG - chr2.1:43356188-43356207 MS.gene75884:intron 40.0%
CATGGTGGCAAAAGAAATCT+TGG - chr2.1:43356754-43356773 MS.gene75884:intron 40.0%
CCAAGAAAGGATTTCCACAT+TGG - chr2.1:43354855-43354874 MS.gene75884:intron 40.0%
CCAAGAACTTGAAAGGATCA+TGG - chr2.1:43355444-43355463 MS.gene75884:intron 40.0%
CCAATGTGGAAATCCTTTCT+TGG + chr2.1:43354858-43354877 None:intergenic 40.0%
CTATGAATGGGGAAACTGAA+AGG - chr2.1:43355149-43355168 MS.gene75884:intron 40.0%
GAAGATCAGCAAAACTCTCA+TGG - chr2.1:43356420-43356439 MS.gene75884:intron 40.0%
GTAGATAGTGCAACAGATGA+TGG - chr2.1:43355352-43355371 MS.gene75884:intron 40.0%
GTTAAATCCATACCCTTCAG+TGG - chr2.1:43355013-43355032 MS.gene75884:intron 40.0%
GTTCTTTAGCCGTTTGTTCT+GGG + chr2.1:43356845-43356864 None:intergenic 40.0%
GTTTAGCTAGGTTATTCAGC+TGG - chr2.1:43355638-43355657 MS.gene75884:intron 40.0%
GTTTCTAACACCAAGCATCT+TGG - chr2.1:43355274-43355293 MS.gene75884:intron 40.0%
TAAACACCTACGAGACTGTT+TGG - chr2.1:43352458-43352477 MS.gene75884:CDS 40.0%
TAACACTTAACAAAGGGCTG+TGG + chr2.1:43355994-43356013 None:intergenic 40.0%
TCTTCATCGTTCAAGACACT+TGG + chr2.1:43354679-43354698 None:intergenic 40.0%
TGAAAGGATCATGGAAAGTC+AGG - chr2.1:43355453-43355472 MS.gene75884:intron 40.0%
TGATGTTTCGACTCATAAGG+AGG - chr2.1:43353231-43353250 MS.gene75884:intron 40.0%
TGCCACATATCAAGGTGTAT+AGG + chr2.1:43354334-43354353 None:intergenic 40.0%
TGCTAACTGCATCCTTATTC+AGG - chr2.1:43354510-43354529 MS.gene75884:intron 40.0%
TGCTACAAATATACCTGTGC+AGG - chr2.1:43354991-43355010 MS.gene75884:intron 40.0%
TTCGACTCATAAGGAGGATT+TGG - chr2.1:43353237-43353256 MS.gene75884:intron 40.0%
TTCTTCTATCACCTGTGCAT+TGG + chr2.1:43356640-43356659 None:intergenic 40.0%
! ACTTTTGTAGGTTCGCTTTC+TGG + chr2.1:43356504-43356523 None:intergenic 40.0%
! ATCGGGTGGAAGAATGATTT+TGG - chr2.1:43353624-43353643 MS.gene75884:intron 40.0%
! CATTTTACTCTTGCCTACAG+GGG + chr2.1:43356226-43356245 None:intergenic 40.0%
! CTTTTGTAGGTTCGCTTTCT+GGG + chr2.1:43356503-43356522 None:intergenic 40.0%
! GCATTTTACTCTTGCCTACA+GGG + chr2.1:43356227-43356246 None:intergenic 40.0%
! TCTACAAAGCGTCTTGCATT+AGG + chr2.1:43353274-43353293 None:intergenic 40.0%
! TGATGAGATAGGTTTGGTCA+AGG - chr2.1:43353458-43353477 MS.gene75884:intron 40.0%
! TGCATTTTACTCTTGCCTAC+AGG + chr2.1:43356228-43356247 None:intergenic 40.0%
!! ACACCTGTGCCAGTTATTTT+TGG + chr2.1:43356732-43356751 None:intergenic 40.0%
!! AGAGAACTTGTTGGTAAAGG+AGG - chr2.1:43356348-43356367 MS.gene75884:intron 40.0%
!! ATGATTAGGGTTTTCTAGGG+TGG - chr2.1:43353648-43353667 MS.gene75884:intron 40.0%
!! CCATGATCCTTTCAAGTTCT+TGG + chr2.1:43355447-43355466 None:intergenic 40.0%
!! CTTCTGAGACCATGAAACTT+TGG + chr2.1:43356319-43356338 None:intergenic 40.0%
!! GGCTCTTCTATCACTTTTGT+AGG + chr2.1:43356516-43356535 None:intergenic 40.0%
!! GTAGAGAACAAGTGGATTGA+AGG - chr2.1:43353683-43353702 MS.gene75884:intron 40.0%
!! GTGCTGATTCTTTGAAAGAG+TGG - chr2.1:43357099-43357118 MS.gene75884:CDS 40.0%
!! TATAATGGGTGTGTGTGGAA+AGG - chr2.1:43353109-43353128 MS.gene75884:CDS 40.0%
!! TGGAGAGAACTTGTTGGTAA+AGG - chr2.1:43356345-43356364 MS.gene75884:intron 40.0%
!! TGTTCTGGGAAACTAATGTC+AGG + chr2.1:43356831-43356850 None:intergenic 40.0%
!! TTGTTGTTTGCTGAAGTCCA+TGG + chr2.1:43353897-43353916 None:intergenic 40.0%
!!! CTCCTTTTTTGCGCTTCAAT+GGG + chr2.1:43356123-43356142 None:intergenic 40.0%
ACATTTGCAGATCGTTCCCT+TGG + chr2.1:43357047-43357066 None:intergenic 45.0%
ACCATTATGCTTGCACTCAC+TGG + chr2.1:43356889-43356908 None:intergenic 45.0%
ATGAGTGGGGAAGCAGAAAT+TGG - chr2.1:43355184-43355203 MS.gene75884:intron 45.0%
ATTGATGGAACTGTCACGGA+TGG - chr2.1:43356924-43356943 MS.gene75884:intron 45.0%
CTCGAAACCATTCGTACCAA+AGG - chr2.1:43352185-43352204 MS.gene75884:CDS 45.0%
GACTCCCCAAAATCATGTTC+TGG + chr2.1:43356294-43356313 None:intergenic 45.0%
GCACCAAAAATAACTGGCAC+AGG - chr2.1:43356726-43356745 MS.gene75884:intron 45.0%
GGAAGGGAGGTAGTAAATTC+AGG - chr2.1:43355504-43355523 MS.gene75884:intron 45.0%
GGGAGGTAGTAAATTCAGGT+TGG - chr2.1:43355508-43355527 MS.gene75884:intron 45.0%
GGTATGGATTTAACCTGCAC+AGG + chr2.1:43355007-43355026 None:intergenic 45.0%
GGTTCTTTAGCCGTTTGTTC+TGG + chr2.1:43356846-43356865 None:intergenic 45.0%
GTGCTTCTTTCCAAGATGCT+TGG + chr2.1:43355287-43355306 None:intergenic 45.0%
TAACTGGCACAGGTGTTTCA+TGG - chr2.1:43356736-43356755 MS.gene75884:intron 45.0%
TAAGGCCACGATCACAGTTA+TGG - chr2.1:43353589-43353608 MS.gene75884:intron 45.0%
TCACAAAAATGCACAGGGAG+AGG + chr2.1:43355082-43355101 None:intergenic 45.0%
TCACGGATGGCTTCAACTTA+GGG - chr2.1:43356937-43356956 MS.gene75884:intron 45.0%
TCAGACTGAAGATCTGAAGG+TGG + chr2.1:43354029-43354048 None:intergenic 45.0%
TCCAGTGAGTGCAAGCATAA+TGG - chr2.1:43356885-43356904 MS.gene75884:intron 45.0%
TCGAATGTCATCGGTGGTTA+CGG + chr2.1:43352132-43352151 None:intergenic 45.0%
TCTTCGTGGAGAGAACTTGT+TGG - chr2.1:43356339-43356358 MS.gene75884:intron 45.0%
TGAGTCGAAACATCAGAAGC+TGG + chr2.1:43353226-43353245 None:intergenic 45.0%
TGCTTACCAGTTCCACTGAA+GGG + chr2.1:43355028-43355047 None:intergenic 45.0%
TGGGAATAGTTTGAGGGTGA+GGG - chr2.1:43353710-43353729 MS.gene75884:intron 45.0%
TGTCAGGCAAAAGCTGTGAA+AGG + chr2.1:43356815-43356834 None:intergenic 45.0%
TTAAGGGTTTAGGCCCTCTT+TGG + chr2.1:43353030-43353049 None:intergenic 45.0%
TTGGGAATAGTTTGAGGGTG+AGG - chr2.1:43353709-43353728 MS.gene75884:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr2.1:43353925-43353944 MS.gene75884:CDS 45.0%
! ACATGTGAGGGCACATGTTA+AGG + chr2.1:43354884-43354903 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr2.1:43353924-43353943 MS.gene75884:CDS 45.0%
! CAGTTTTCGAATGTCATCGG+TGG + chr2.1:43352138-43352157 None:intergenic 45.0%
! GGCGTAGAGTCACTTTACTA+TGG + chr2.1:43354307-43354326 None:intergenic 45.0%
! TCTATCACCTGTGCATTGGT+AGG + chr2.1:43356636-43356655 None:intergenic 45.0%
! TGATCGTGGCCTTAATGTCA+AGG + chr2.1:43353583-43353602 None:intergenic 45.0%
!! CTTTTGATTCACTCGAGTCG+CGG + chr2.1:43354278-43354297 None:intergenic 45.0%
!! TGCAGTATAATGGGTGTGTG+TGG - chr2.1:43353104-43353123 MS.gene75884:CDS 45.0%
!!! GCTCCTTTTTTGCGCTTCAA+TGG + chr2.1:43356124-43356143 None:intergenic 45.0%
AAACGAATTTGCGGTGAGCG+TGG - chr2.1:43353993-43354012 MS.gene75884:CDS 50.0%
AATGGGTGTGTGTGGAAAGG+TGG - chr2.1:43353112-43353131 MS.gene75884:CDS 50.0%
ACCAGTTCCACTGAAGGGTA+TGG + chr2.1:43355023-43355042 None:intergenic 50.0%
ACGCTCACCGCAAATTCGTT+TGG + chr2.1:43353994-43354013 None:intergenic 50.0%
ACTGCGACCTTTGGTACGAA+TGG + chr2.1:43352195-43352214 None:intergenic 50.0%
AGATCCCAGCCCATCTAGAA+GGG + chr2.1:43356253-43356272 None:intergenic 50.0%
AGTGGGGAAGCAGAAATTGG+TGG - chr2.1:43355187-43355206 MS.gene75884:intron 50.0%
ATCTCTGCCTACCAATGCAC+AGG - chr2.1:43356626-43356645 MS.gene75884:intron 50.0%
ATGCTTGCACTCACTGGAAC+CGG + chr2.1:43356883-43356902 None:intergenic 50.0%
CACGGATGGCTTCAACTTAG+GGG - chr2.1:43356938-43356957 MS.gene75884:intron 50.0%
CAGGGACCCAAGAACTTGAA+AGG - chr2.1:43355437-43355456 MS.gene75884:intron 50.0%
CATGGTCTCAGAAGTCTTCG+TGG - chr2.1:43356325-43356344 MS.gene75884:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr2.1:43353926-43353945 None:intergenic 50.0%
CCAGAACATAGTGAGCATGC+TGG - chr2.1:43356969-43356988 MS.gene75884:intron 50.0%
CCAGCATGCTCACTATGTTC+TGG + chr2.1:43356972-43356991 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr2.1:43353929-43353948 MS.gene75884:CDS 50.0%
GAACCGGCAGGGTACAAAAT+GGG + chr2.1:43356867-43356886 None:intergenic 50.0%
GAGCAAGAGCGATTCTAGCA+AGG - chr2.1:43356140-43356159 MS.gene75884:intron 50.0%
GCAGTGAGAATATTCGTCGG+AGG - chr2.1:43352095-43352114 MS.gene75884:CDS 50.0%
GCGTCAGACTGAAGATCTGA+AGG + chr2.1:43354032-43354051 None:intergenic 50.0%
GGATAGTAGTTGTGATCGGG+TGG - chr2.1:43353610-43353629 MS.gene75884:intron 50.0%
GGGAGTCTGCCAAAGTTTCA+TGG - chr2.1:43356307-43356326 MS.gene75884:intron 50.0%
GTCACGGATGGCTTCAACTT+AGG - chr2.1:43356936-43356955 MS.gene75884:intron 50.0%
GTCGAAACATCAGAAGCTGG+TGG + chr2.1:43353223-43353242 None:intergenic 50.0%
GTGCTTACCAGTTCCACTGA+AGG + chr2.1:43355029-43355048 None:intergenic 50.0%
TCCATACCCTTCAGTGGAAC+TGG - chr2.1:43355019-43355038 MS.gene75884:intron 50.0%
TCTCTCCCAAACAGTCTCGT+AGG + chr2.1:43352467-43352486 None:intergenic 50.0%
TTGGTAGGCAGAGATTCAGC+AGG + chr2.1:43356621-43356640 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr2.1:43353923-43353942 MS.gene75884:CDS 50.0%
! GAACCCATTTTGTACCCTGC+CGG - chr2.1:43356861-43356880 MS.gene75884:intron 50.0%
! TGGTGGTCCTCCAAGAGTTT+TGG - chr2.1:43354208-43354227 MS.gene75884:CDS 50.0%
! TTGGTAGGTTGAGATTCGGC+AGG + chr2.1:43356537-43356556 None:intergenic 50.0%
! TTGGTAGGTTGAGCTTCAGC+AGG + chr2.1:43356579-43356598 None:intergenic 50.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr2.1:43353937-43353956 MS.gene75884:CDS 55.0%
AGTTTGAGGGTGAGGGAGTG+TGG - chr2.1:43353717-43353736 MS.gene75884:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr2.1:43353938-43353957 None:intergenic 55.0%
CAGATCCCAGCCCATCTAGA+AGG + chr2.1:43356254-43356273 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr2.1:43353931-43353950 None:intergenic 55.0%
CGTTACGGGGATAGCTCAGT+CGG + chr2.1:43354059-43354078 None:intergenic 55.0%
CTGGCACAGGTGTTTCATGG+TGG - chr2.1:43356739-43356758 MS.gene75884:intron 55.0%
GGAACCGGCAGGGTACAAAA+TGG + chr2.1:43356868-43356887 None:intergenic 55.0%
GTAAGCGAGACTGCGACCTT+TGG + chr2.1:43352204-43352223 None:intergenic 55.0%
GTTACGGGGATAGCTCAGTC+GGG + chr2.1:43354058-43354077 None:intergenic 55.0%
GTTGCGTCTAGTACCCCTGT+AGG - chr2.1:43356210-43356229 MS.gene75884:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr2.1:43353937-43353956 None:intergenic 55.0%
! CAGACCCTTCTAGATGGGCT+GGG - chr2.1:43356246-43356265 MS.gene75884:intron 55.0%
!! CTTCTAGATGGGCTGGGATC+TGG - chr2.1:43356252-43356271 MS.gene75884:intron 55.0%
GCAGACCCTTCTAGATGGGC+TGG - chr2.1:43356245-43356264 MS.gene75884:intron 60.0%
TGCACTCACTGGAACCGGCA+GGG + chr2.1:43356878-43356897 None:intergenic 60.0%
TTGCACTCACTGGAACCGGC+AGG + chr2.1:43356879-43356898 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 43352068 43357181 43352068 ID=MS.gene75884
chr2.1 mRNA 43352068 43357181 43352068 ID=MS.gene75884.t1;Parent=MS.gene75884
chr2.1 exon 43356978 43357181 43356978 ID=MS.gene75884.t1.exon1;Parent=MS.gene75884.t1
chr2.1 CDS 43356978 43357181 43356978 ID=cds.MS.gene75884.t1;Parent=MS.gene75884.t1
chr2.1 exon 43355910 43356140 43355910 ID=MS.gene75884.t1.exon2;Parent=MS.gene75884.t1
chr2.1 CDS 43355910 43356140 43355910 ID=cds.MS.gene75884.t1;Parent=MS.gene75884.t1
chr2.1 exon 43353775 43354236 43353775 ID=MS.gene75884.t1.exon3;Parent=MS.gene75884.t1
chr2.1 CDS 43353775 43354236 43353775 ID=cds.MS.gene75884.t1;Parent=MS.gene75884.t1
chr2.1 exon 43352068 43353165 43352068 ID=MS.gene75884.t1.exon4;Parent=MS.gene75884.t1
chr2.1 CDS 43352068 43353165 43352068 ID=cds.MS.gene75884.t1;Parent=MS.gene75884.t1
Gene Sequence

>MS.gene75884

ATGGAGGAAGAAGAAAGCGAGAAGAGAGCAGTGAGAATATTCGTCGGAGGATTAGGCGAAGCCGTAACCACCGATGACATTCGAAAACTGTTCGAATCATTGGGTAGCGTTCAATCACTCGAAACCATTCGTACCAAAGGTCGCAGTCTCGCTTACCTTGATTTCCTTGCTGATTCTAAATCCCTTTCCAAACTTTTCAGTAAGGTACCAATCTTTCTCACTTCACTTAATCACTACAATTATGTTTTTCATTGTTCAATTAACTTTTATAAACTATAGAAGTAAGTAGTTATGATTAAAGTCGAATATTTTATTGATACAGACGATTTTGATTGATTGATTGACAATGAAAAAAGCTTGAATTGCCTTATTTGAGTTTATCTGCGGACTTAAACACCTACGAGACTGTTTGGGAGAGACTATGTTTCAGCTTGTTTTCATAAGCTCTTTAGGTCAACTAGTTAAAACAACAGCTTATAGGTTAGTATATGAAAACAATTTCAATTAATCACTTCCGTCACATTTTTATTATTTTATTTAAATTTTGATACATGTGACTTTAGAAGTTGGTATTATTAAAGTTAATTTTTTTTAATGAATGACGATTTTGATTGATTGGCTGTGTAAAAAATCTTTGTTTTAACAATGTATACGAATTAAGACTCAGTTTGGATAGACTTATTTGAACTTATCTACTCACATAAACACTTAAGAGAATTTTTGAGAGAGCTATGGAAACACCTTATGCTGTTTTGACAATGTATATGAATTAAGAGTCAGTTTGGATTGACTTATATGCATAAGCTGTTTTTATCTTGATTCCGTAAGCTAGGAAAACTTATGAAAACAAATAAATTGAATGAAAGCAATTTAACTACATTTTATCTTTCACTATAGAAATAGCTTATGCATAAGTTTTTATAGCTTATGGTATGTAAGCATTTAGTTAAGTTGTTTATCCAAAGAGGGCCTAAACCCTTAAATTAATTCTATTTTCTTCGTATATTATTTTTAAAAGTAATGATTATGTTGGCATTGCAGTATAATGGGTGTGTGTGGAAAGGTGGAAAGCTGAAACTTGAAAAGGCCAAAGAGCATTACCTTGATCGTTTGAAAAAAGAATGGGAAGAAGATGCAATTCTTAGTATTGAACCACCAGCTTCTGATGTTTCGACTCATAAGGAGGATTTGGTAAAGGAAAAGCCTAATGCAAGACGCTTTGTAGATCCAGATGCAAAGCCTCTCAATATTTACTTCCCAAGATTAAGAACGGTTCGTTACCATTATAACCTGTTTACTCATTTATTTATTTTAGTATGTTCTATTATATGATTTATTGTTTTTGCTATTTGTGGAAAAGTCTATGGCAGATTGCTCTTCTTTTATATTGTGATGAGATAGGTTTGGTCAAGGTTTAAATAGAAGTTGTGTTGCGATTCTTGATATATTGCAGGTATTTGCGGTTAAATATCAATGATACGGTCACAATTTTGATTTCTTAGACATCAAAAGCCTTGACATTAAGGCCACGATCACAGTTATGGATAGTAGTTGTGATCGGGTGGAAGAATGATTTTGGAATGATTAGGGTTTTCTAGGGTGGACTGAAAATAGTGTAGAGAACAAGTGGATTGAAGGATATTGGGAATAGTTTGAGGGTGAGGGAGTGTGGTATCGTAGCAATCATAGTAGAACCGAGAATTATGGTTAGATAACATAGGTTGAGTTGAACGATATATGTTAGAGTTAACCTTGATTTTGATTAAGTTAACACTGCATATGGACATTGAAGAATGTACACAAAATTTAGAAAATAGGAAAGGAAACCATGGACTTCAGCAAACAACAACAACTACCAAGCCTTATCCCACTAAGTGGGGTCGGCTACATGGATCAAATTTAACCATAATGCTCTATCGTAAACCAAACGAATTTGCGGTGAGCGTGGATCAAACACGCCACCTTCAGATCTTCAGTCTGACGCTCTCCCGACTGAGCTATCCCCGTAACGAATAACAAAATAAATTTACTTAATCTGAAGGGGTCTGATTGCATTGCATAATATAATCAGGTAAGTAGAAATTTATTGCAATATAGTAAAACTAAAAACCATGATTGAAAGCACTACATCTGTTTTAATTGGTGGTCCTCCAAGAGTTTTGGATTGAAAACATGATCCAGTAATGATTGATACTCTCTAGTCTCTACCGCGACTCGAGTGAATCAAAAGTTAAAACCATAGTAAAGTGACTCTACGCCAAAACCTATACACCTTGATATGTGGCACGAATTATTGTGTAGCGCTAGGAATATTATATAAGTAAGACATTCATATCTTGATTATTTATGTGAAATCAGTAGTCAGTATATAATCATTATATTAGCCCAGAATGTAGGGAGATATTTGACCTTTAAGGCTTTTCTTGTAACTAAAGCTCCTCTTGCTAACTGCATCCTTATTCAGGAAATGTAACTAATACTACCTCTATCCCTAAATCTTTTGACCTCTTTCCCTTAATTTGTTGAGAAAAAAATTGTCCCTTAGTGTAAGCCACTTTTCAAATGACATTATACATTTTTTTTTTTTCAAATACCCTTAATTAATCAACCAAGTGTCTTGAACGATGAAGAGTCAAAATTGATTACAAAAGTCTATTTAGGAGCATTTATACACAAAAGGGACACATTAAATATTCCATCTACTTCTCTTAATATACTAGTATGAAAATTGTAGTGTTTGTGAAAAGGGACAGATGTAGTAATTGAAGTAGATTAAATGCACTATTTCCAAGAAAGGATTTCCACATTGGGTTCCTTAACATGTGCCCTCACATGTTAGCATTTCCATTGTTTAATTATACAGATTTTATGTTTGCTTCTGCATAAATATTTCATTACTAAATCAACTGACTCAAATTTTGCATGCTACAAATATACCTGTGCAGGTTAAATCCATACCCTTCAGTGGAACTGGTAAGCACAAATACAGTTTCCAGAATATTAAAGTTGGTCCTCTCCCTGTGCATTTTTGTGATTGTGAGGAACATTGCAGTCCTTTTATCGCAAAAAAGGATAAGTTATCTATGAATGGGGAAACTGAAAGGGAAAAGTTATCTATGAGTGGGGAAGCAGAAATTGGTGGAATAAATGATGAAGAAATTAACATAATGAATGCTGTGATGAACAAGCTTCTTGAAAAAGAAAAGGTTTCTAACACCAAGCATCTTGGAAAGAAGCACGATTCTTTTGAATCTCTCAGTGTTATTCATTCTAATGAATGTGAAGTAGATAGTGCAACAGATGATGGTGATGATGATGATGATGATCTCATAACCAACATTGCAACAAAGAAAAACAAAGCAGCTTTGACAGGGACCCAAGAACTTGAAAGGATCATGGAAAGTCAGGTTAGTTTCGTATCATTTATTTTTTATTTGGAAGGGAGGTAGTAAATTCAGGTTGGTTTTTGGGTTTGTTTGCCATAACTAGCTGATAAGGTAGTTTTTTTTCTCTCTTTTTTTTTTTTTATAAAAGCTGAAAGTTGAGAAACTAATTTTTTGTTAAAAAGCTGTTTAGCTAGGTTATTCAGCTGGAAGTATTAAGTAAATTTAACTGTTGAACTATTAGATAAATGTAAATTGATAAAATACATCTATATAATTTTTTTATACAAAATCCTAGTTTTGTTTTGTATACAAAAATACATGTTCAAATAAATATAGTTTTAGGCTTTTCAGTTAACTTTAACATCTTTTTCTTCTAACTTTACTTCGAGCAGCTCCTTAAAAAACACAACGAACTAGTGAGATATTTTTGTTTATCAAATATCTCTATATTGTTTAAACAAGTTTCTAAGCCAATCAAATAAGCTCTAAACGTTTGCTATAAAAATGTATGAAGTAGCTGAAATGACTAGTCAAACGCCACAGCCCTTTGTTAAGTGTTAGTGTCAGATTACTTTTATCAAAGAATAGGTAAGCTATTCAATCTATGTAACTGTGATTTTTGGTCTTCAGGAATGGTCCAATAAAACAAATATTGCGGAGGAGGAACCCATTGAAGCGCAAAAAAGGAGCAAGAGCGATTCTAGCAAGGTTAAGAAGAGAAAATCACTTCCCAAATCGGAAAGTGAAAGCAATGGGGTTGCGTCTAGTACCCCTGTAGGCAAGAGTAAAATGCAGACCCTTCTAGATGGGCTGGGATCTGGTGCAAAGCCTACTGAACCAGAACATGATTTTGGGGAGTCTGCCAAAGTTTCATGGTCTCAGAAGTCTTCGTGGAGAGAACTTGTTGGTAAAGGAGGCAATGCTTCATTCAGTGCCTCTCTCATATTGCCGAAGTTTGATACTGCTGAAGATCAGCAAAACTCTCATGGTTCTTACACTTCCTCTTCTACAAACGATGAAACTGAAGACATGGAAAGCGATGAATACCCAGAAAGCGAACCTACAAAAGTGATAGAAGAGCCTGCCGAATCTCAACCTACCAATACACAAATGATCAAAGAACACGCTGAAGCTCAACCTACCAATACAAGAGTGATAGAAGAGCCTGCTGAATCTCTGCCTACCAATGCACAGGTGATAGAAGAACCTGCTGAAGCTCAACCTACCAATAAACAAGTGATAACTGAACCTGCTGAAACTCAGCATAACTTAGCACCAAAAATAACTGGCACAGGTGTTTCATGGTGGCAAAAGAAATCTTGGACCCAGTTGGCTAATGAGAATAACAGTCCATTTAGCCTTTCACAGCTTTTGCCTGACATTAGTTTCCCAGAACAAACGGCTAAAGAACCCATTTTGTACCCTGCCGGTTCCAGTGAGTGCAAGCATAATGGTGCTGATAAGAATACTATTGATGGAACTGTCACGGATGGCTTCAACTTAGGGGAGATTGTACCAGAACATAGTGAGCATGCTGGTACCGATGATATAGTTTCTGCTCCAGTAGTTGAGAAAATCGTTGAAACAAGTCCAAGGGAACGATCTGCAAATGTTGAAATAGGAGAAACTTGCTCATTTATGAGAAGTGCTGATTCTTTGAAAGAGTGGAAAAAAGCTAAAGCTGCTGTTAGTGGATCGCTCAAAAGAAAACGCAGTGAGAAGAAGTAA

Protein sequence

>MS.gene75884.t1

MEEEESEKRAVRIFVGGLGEAVTTDDIRKLFESLGSVQSLETIRTKGRSLAYLDFLADSKSLSKLFSKYNGCVWKGGKLKLEKAKEHYLDRLKKEWEEDAILSIEPPASDVSTHKEDLVKEKPNARRFVDPDAKPLNIYFPRLRTVKSIPFSGTGKHKYSFQNIKVGPLPVHFCDCEEHCSPFIAKKDKLSMNGETEREKLSMSGEAEIGGINDEEINIMNAVMNKLLEKEKVSNTKHLGKKHDSFESLSVIHSNECEVDSATDDGDDDDDDLITNIATKKNKAALTGTQELERIMESQEWSNKTNIAEEEPIEAQKRSKSDSSKVKKRKSLPKSESESNGVASSTPVGKSKMQTLLDGLGSGAKPTEPEHDFGESAKVSWSQKSSWRELVGKGGNASFSASLILPKFDTAEDQQNSHGSYTSSSTNDETEDMESDEYPESEPTKVIEEPAESQPTNTQMIKEHAEAQPTNTRVIEEPAESLPTNAQVIEEPAEAQPTNKQVITEPAETQHNLAPKITGTGVSWWQKKSWTQLANENNSPFSLSQLLPDISFPEQTAKEPILYPAGSSECKHNGADKNTIDGTVTDGFNLGEIVPEHSEHAGTDDIVSAPVVEKIVETSPRERSANVEIGETCSFMRSADSLKEWKKAKAAVSGSLKRKRSEKK