Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91524.t1 | XP_003621181.1 | 100 | 89 | 0 | 0 | 1 | 89 | 1 | 89 | 3.10E-42 | 180.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91524.t1 | P40590 | 98.9 | 89 | 1 | 0 | 1 | 89 | 1 | 89 | 6.3e-44 | 177.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91524.t1 | Q2HVS3 | 100.0 | 89 | 0 | 0 | 1 | 89 | 1 | 89 | 2.2e-42 | 180.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene91524 | 0.808052 | 3.74E-50 | -1.69E-46 |
| MS.gene049166 | MS.gene91524 | 0.810047 | 1.40E-50 | -1.69E-46 |
| MS.gene04917 | MS.gene91524 | 0.807876 | 4.08E-50 | -1.69E-46 |
| MS.gene049208 | MS.gene91524 | 0.803636 | 3.17E-49 | -1.69E-46 |
| MS.gene04984 | MS.gene91524 | 0.803818 | 2.91E-49 | -1.69E-46 |
| MS.gene049857 | MS.gene91524 | 0.800504 | 1.40E-48 | -1.69E-46 |
| MS.gene049887 | MS.gene91524 | 0.828923 | 6.86E-55 | -1.69E-46 |
| MS.gene050114 | MS.gene91524 | 0.851006 | 1.18E-60 | -1.69E-46 |
| MS.gene050277 | MS.gene91524 | 0.817235 | 3.66E-52 | -1.69E-46 |
| MS.gene050317 | MS.gene91524 | 0.847107 | 1.43E-59 | -1.69E-46 |
| MS.gene050320 | MS.gene91524 | 0.84983 | 2.51E-60 | -1.69E-46 |
| MS.gene050838 | MS.gene91524 | 0.878014 | 3.95E-69 | -1.69E-46 |
| MS.gene050992 | MS.gene91524 | 0.80935 | 1.98E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene91524 | 0.812003 | 5.28E-51 | -1.69E-46 |
| MS.gene051063 | MS.gene91524 | 0.837259 | 5.78E-57 | -1.69E-46 |
| MS.gene051233 | MS.gene91524 | 0.801266 | 9.76E-49 | -1.69E-46 |
| MS.gene051245 | MS.gene91524 | 0.828232 | 1.01E-54 | -1.69E-46 |
| MS.gene051451 | MS.gene91524 | 0.806214 | 9.17E-50 | -1.69E-46 |
| MS.gene051687 | MS.gene91524 | 0.806289 | 8.84E-50 | -1.69E-46 |
| MS.gene051746 | MS.gene91524 | 0.867763 | 1.08E-65 | -1.69E-46 |
| MS.gene051748 | MS.gene91524 | 0.874884 | 4.76E-68 | -1.69E-46 |
| MS.gene051756 | MS.gene91524 | 0.862404 | 5.19E-64 | -1.69E-46 |
| MS.gene051757 | MS.gene91524 | 0.821784 | 3.36E-53 | -1.69E-46 |
| MS.gene051850 | MS.gene91524 | 0.859841 | 3.13E-63 | -1.69E-46 |
| MS.gene051903 | MS.gene91524 | 0.853961 | 1.69E-61 | -1.69E-46 |
| MS.gene052202 | MS.gene91524 | 0.807248 | 5.55E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene91524 | 0.824099 | 9.69E-54 | -1.69E-46 |
| MS.gene052947 | MS.gene91524 | 0.824996 | 5.96E-54 | -1.69E-46 |
| MS.gene053058 | MS.gene91524 | 0.820423 | 6.91E-53 | -1.69E-46 |
| MS.gene053109 | MS.gene91524 | 0.875868 | 2.19E-68 | -1.69E-46 |
| MS.gene053167 | MS.gene91524 | 0.801736 | 7.82E-49 | -1.69E-46 |
| MS.gene053381 | MS.gene91524 | 0.845266 | 4.52E-59 | -1.69E-46 |
| MS.gene05380 | MS.gene91524 | 0.800674 | 1.29E-48 | -1.69E-46 |
| MS.gene053952 | MS.gene91524 | 0.855482 | 6.12E-62 | -1.69E-46 |
| MS.gene055174 | MS.gene91524 | 0.807485 | 4.94E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene91524 | 0.829151 | 6.04E-55 | -1.69E-46 |
| MS.gene055313 | MS.gene91524 | 0.801964 | 7.02E-49 | -1.69E-46 |
| MS.gene055314 | MS.gene91524 | 0.811882 | 5.61E-51 | -1.69E-46 |
| MS.gene055424 | MS.gene91524 | 0.839295 | 1.73E-57 | -1.69E-46 |
| MS.gene055441 | MS.gene91524 | 0.800025 | 1.75E-48 | -1.69E-46 |
| MS.gene055780 | MS.gene91524 | 0.805712 | 1.17E-49 | -1.69E-46 |
| MS.gene056075 | MS.gene91524 | 0.811494 | 6.81E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene91524 | 0.810777 | 9.74E-51 | -1.69E-46 |
| MS.gene056432 | MS.gene91524 | 0.84226 | 2.88E-58 | -1.69E-46 |
| MS.gene056580 | MS.gene91524 | 0.801798 | 7.60E-49 | -1.69E-46 |
| MS.gene056631 | MS.gene91524 | 0.803922 | 2.77E-49 | -1.69E-46 |
| MS.gene056752 | MS.gene91524 | 0.841072 | 5.93E-58 | -1.69E-46 |
| MS.gene056787 | MS.gene91524 | 0.805718 | 1.17E-49 | -1.69E-46 |
| MS.gene056992 | MS.gene91524 | 0.816464 | 5.46E-52 | -1.69E-46 |
| MS.gene057057 | MS.gene91524 | 0.844205 | 8.73E-59 | -1.69E-46 |
| MS.gene057094 | MS.gene91524 | 0.908299 | 1.99E-81 | -1.69E-46 |
| MS.gene057234 | MS.gene91524 | 0.851569 | 8.15E-61 | -1.69E-46 |
| MS.gene057452 | MS.gene91524 | -0.810239 | 1.27E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene91524 | 0.823091 | 1.67E-53 | -1.69E-46 |
| MS.gene058055 | MS.gene91524 | 0.819442 | 1.16E-52 | -1.69E-46 |
| MS.gene05809 | MS.gene91524 | 0.815109 | 1.09E-51 | -1.69E-46 |
| MS.gene058238 | MS.gene91524 | 0.827085 | 1.90E-54 | -1.69E-46 |
| MS.gene058639 | MS.gene91524 | 0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene058646 | MS.gene91524 | 0.803755 | 3.00E-49 | -1.69E-46 |
| MS.gene058654 | MS.gene91524 | 0.827973 | 1.16E-54 | -1.69E-46 |
| MS.gene058758 | MS.gene91524 | 0.831582 | 1.54E-55 | -1.69E-46 |
| MS.gene05880 | MS.gene91524 | 0.80166 | 8.11E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene91524 | 0.845704 | 3.44E-59 | -1.69E-46 |
| MS.gene059171 | MS.gene91524 | 0.857942 | 1.16E-62 | -1.69E-46 |
| MS.gene059726 | MS.gene91524 | 0.804747 | 1.86E-49 | -1.69E-46 |
| MS.gene059898 | MS.gene91524 | 0.802862 | 4.59E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene91524 | 0.868093 | 8.43E-66 | -1.69E-46 |
| MS.gene06010 | MS.gene91524 | 0.819268 | 1.27E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene91524 | 0.835538 | 1.58E-56 | -1.69E-46 |
| MS.gene060463 | MS.gene91524 | 0.855849 | 4.78E-62 | -1.69E-46 |
| MS.gene060465 | MS.gene91524 | 0.864736 | 9.81E-65 | -1.69E-46 |
| MS.gene060702 | MS.gene91524 | 0.83638 | 9.68E-57 | -1.69E-46 |
| MS.gene060763 | MS.gene91524 | 0.828289 | 9.76E-55 | -1.69E-46 |
| MS.gene060869 | MS.gene91524 | 0.837986 | 3.76E-57 | -1.69E-46 |
| MS.gene060870 | MS.gene91524 | 0.815258 | 1.01E-51 | -1.69E-46 |
| MS.gene061145 | MS.gene91524 | 0.846261 | 2.43E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91524.t1 | MTR_5g040570 | 100.000 | 89 | 0 | 0 | 1 | 89 | 1 | 89 | 8.62e-61 | 181 |
| MS.gene91524.t1 | MTR_7g010150 | 100.000 | 89 | 0 | 0 | 1 | 89 | 1 | 89 | 1.06e-60 | 181 |
| MS.gene91524.t1 | MTR_8g467460 | 100.000 | 89 | 0 | 0 | 1 | 89 | 1 | 89 | 1.70e-60 | 180 |
| MS.gene91524.t1 | MTR_7g011050 | 66.292 | 89 | 14 | 1 | 1 | 89 | 1 | 73 | 6.19e-34 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91524.t1 | AT1G26880 | 93.258 | 89 | 6 | 0 | 1 | 89 | 1 | 89 | 9.60e-57 | 171 |
| MS.gene91524.t1 | AT1G69620 | 93.258 | 89 | 6 | 0 | 1 | 89 | 1 | 89 | 2.05e-56 | 170 |
| MS.gene91524.t1 | AT1G26880 | 93.258 | 89 | 6 | 0 | 1 | 89 | 1 | 89 | 4.54e-56 | 168 |
| MS.gene91524.t1 | AT3G28900 | 89.888 | 89 | 9 | 0 | 1 | 89 | 1 | 89 | 4.72e-54 | 164 |
Find 30 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAACCGCCGCACTGTTAAC+AGG | 0.305052 | 7.1:+85279814 | MS.gene91524:CDS |
| TGGATCCTCTTTCCAGTAAC+AGG | 0.314412 | 7.1:-85278551 | None:intergenic |
| GGACCTAAGTGTCCTGTTAC+TGG | 0.331250 | 7.1:+85278539 | MS.gene91524:CDS |
| CGCACTGTTAACAGGGCTTA+TGG | 0.356563 | 7.1:+85279822 | MS.gene91524:CDS |
| AACACGATGCTGGTTGGATT+TGG | 0.389836 | 7.1:-85278317 | None:intergenic |
| TTAACAGTGCGGCGGTTCCT+AGG | 0.468395 | 7.1:-85279810 | None:intergenic |
| CCTTTCCCTAACAGCTCCTC+CGG | 0.470814 | 7.1:-85279856 | None:intergenic |
| TTTATCCGGAGGAGCTGTTA+GGG | 0.501294 | 7.1:+85279851 | MS.gene91524:CDS |
| TTTCCAGTAACAGGACACTT+AGG | 0.509665 | 7.1:-85278542 | None:intergenic |
| ACGATGCTGGTTGGATTTGG+TGG | 0.532546 | 7.1:-85278314 | None:intergenic |
| CATCGTGTTGTTAAGACACC+TGG | 0.536949 | 7.1:+85278331 | MS.gene91524:CDS |
| AGTGTCCTGTTACTGGAAAG+AGG | 0.543803 | 7.1:+85278546 | MS.gene91524:CDS |
| CTTAACAACACGATGCTGGT+TGG | 0.545517 | 7.1:-85278323 | None:intergenic |
| GTTACTGGAAAGAGGATCCA+AGG | 0.571456 | 7.1:+85278554 | MS.gene91524:CDS |
| ACAACTAAGAAGAGAGCTAG+TGG | 0.577057 | 7.1:+85278518 | MS.gene91524:CDS |
| GTGTCTTAACAACACGATGC+TGG | 0.578379 | 7.1:-85278327 | None:intergenic |
| TGGCATAGCTGTGTCTCCTA+CGG | 0.580308 | 7.1:-85278294 | None:intergenic |
| CCGGAGGAGCTGTTAGGGAA+AGG | 0.595594 | 7.1:+85279856 | MS.gene91524:CDS |
| GAACCGCCGCACTGTTAACA+GGG | 0.611783 | 7.1:+85279815 | MS.gene91524:CDS |
| CTAGACCTCTTGTATTCAGT+AGG | 0.617053 | 7.1:-85279783 | None:intergenic |
| TTACTGGAAAGAGGATCCAA+GGG | 0.629653 | 7.1:+85278555 | MS.gene91524:CDS |
| TGAGACCTACTGAATACAAG+AGG | 0.631121 | 7.1:+85279778 | MS.gene91524:CDS |
| ACAAGAGGTCTAGATTGCCT+AGG | 0.636078 | 7.1:+85279793 | MS.gene91524:CDS |
| TATTCAGTAGGTCTCAAGTG+TGG | 0.667813 | 7.1:-85279771 | None:intergenic |
| AAGCCCTGTTAACAGTGCGG+CGG | 0.691394 | 7.1:-85279818 | None:intergenic |
| ACTGTTAACAGGGCTTATGG+AGG | 0.693206 | 7.1:+85279825 | MS.gene91524:CDS |
| TTCAGAGACTCACATACCGT+AGG | 0.721913 | 7.1:+85278278 | MS.gene91524:CDS |
| CATAAGCCCTGTTAACAGTG+CGG | 0.730145 | 7.1:-85279821 | None:intergenic |
| TACTGGAAAGAGGATCCAAG+GGG | 0.738216 | 7.1:+85278556 | MS.gene91524:CDS |
| GTATGTGAGTCTCTGAACCA+TGG | 0.739024 | 7.1:-85278272 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAAAATCAATTATTTG+TGG | + | chr7.1:85278842-85278861 | MS.gene91524:intron | 10.0% |
| !! | ATTTGAAAATTGAAAATATT+AGG | - | chr7.1:85278926-85278945 | None:intergenic | 10.0% |
| !!! | TTTTTTAGAAATTAATATGT+TGG | + | chr7.1:85278600-85278619 | MS.gene91524:intron | 10.0% |
| !! | TAACAAATCTTCAATAAAAA+TGG | - | chr7.1:85279256-85279275 | None:intergenic | 15.0% |
| !! | TTTGCAATTATTAATGTTAA+TGG | + | chr7.1:85278807-85278826 | MS.gene91524:intron | 15.0% |
| !!! | TTTGATTAATTTGTGAAAAT+GGG | + | chr7.1:85278460-85278479 | MS.gene91524:intron | 15.0% |
| !!! | TTTTGATTAATTTGTGAAAA+TGG | + | chr7.1:85278459-85278478 | MS.gene91524:intron | 15.0% |
| !! | GAATGAAAATTAAAAGTAGT+AGG | - | chr7.1:85279630-85279649 | None:intergenic | 20.0% |
| !!! | TTAATACTACAATTTTGTGA+GGG | - | chr7.1:85279416-85279435 | None:intergenic | 20.0% |
| !!! | TTAATATGTTGGTTATACAT+AGG | + | chr7.1:85278611-85278630 | MS.gene91524:intron | 20.0% |
| !!! | TTTAATACTACAATTTTGTG+AGG | - | chr7.1:85279417-85279436 | None:intergenic | 20.0% |
| ! | AAACTATCTCTTCTGTAATA+GGG | - | chr7.1:85279114-85279133 | None:intergenic | 25.0% |
| ! | AATGTTCTTACTTCAATGTT+GGG | + | chr7.1:85278876-85278895 | MS.gene91524:intron | 25.0% |
| ! | AGATACCCTTTCTAAATTAT+TGG | + | chr7.1:85279436-85279455 | MS.gene91524:intron | 25.0% |
| ! | AGTCACCAATAATTTAGAAA+GGG | - | chr7.1:85279444-85279463 | None:intergenic | 25.0% |
| ! | ATCTATCATGTTTCAAACAT+AGG | - | chr7.1:85279280-85279299 | None:intergenic | 25.0% |
| ! | GAAAATTAAAAGTAGTAGGT+AGG | - | chr7.1:85279626-85279645 | None:intergenic | 25.0% |
| ! | GACTTGTATTATTCATCAAT+TGG | + | chr7.1:85278727-85278746 | MS.gene91524:intron | 25.0% |
| ! | GATATATGTGAGTTTATGAT+AGG | + | chr7.1:85278705-85278724 | MS.gene91524:intron | 25.0% |
| ! | GCATCATTGAAATTATACAA+TGG | - | chr7.1:85279529-85279548 | None:intergenic | 25.0% |
| ! | TGTAAAATAGGTGGAATATT+AGG | + | chr7.1:85278772-85278791 | MS.gene91524:intron | 25.0% |
| ! | TTATCATATTTGTTCTGTTC+TGG | + | chr7.1:85279732-85279751 | MS.gene91524:intron | 25.0% |
| ! | TTGAATTCATCTATGTTAGT+TGG | - | chr7.1:85278956-85278975 | None:intergenic | 25.0% |
| ! | TTGTCTGTGTTATGTAAAAT+AGG | + | chr7.1:85278760-85278779 | MS.gene91524:intron | 25.0% |
| AAGTGTCAAGATTATATGCA+GGG | - | chr7.1:85279602-85279621 | None:intergenic | 30.0% | |
| CAAACTATCTCTTCTGTAAT+AGG | - | chr7.1:85279115-85279134 | None:intergenic | 30.0% | |
| CAACACAATATTCAATCAGA+TGG | - | chr7.1:85279084-85279103 | None:intergenic | 30.0% | |
| CAGTCACCAATAATTTAGAA+AGG | - | chr7.1:85279445-85279464 | None:intergenic | 30.0% | |
| GAATGTTCTTACTTCAATGT+TGG | + | chr7.1:85278875-85278894 | MS.gene91524:intron | 30.0% | |
| TCTGTGTTATGTAAAATAGG+TGG | + | chr7.1:85278763-85278782 | MS.gene91524:intron | 30.0% | |
| ! | AAAATTGATGATAGCGTCAA+AGG | - | chr7.1:85279326-85279345 | None:intergenic | 30.0% |
| ! | AAAGTGTCAAGATTATATGC+AGG | - | chr7.1:85279603-85279622 | None:intergenic | 30.0% |
| !!! | AAATGGGTTTGTGTTGTTTT+AGG | + | chr7.1:85278476-85278495 | MS.gene91524:intron | 30.0% |
| CAATTCTACAACATTGTGGA+AGG | + | chr7.1:85279548-85279567 | MS.gene91524:intron | 35.0% | |
| GATGCAATTCTACAACATTG+TGG | + | chr7.1:85279544-85279563 | MS.gene91524:intron | 35.0% | |
| TCATATAGATTCATACCCCT+TGG | - | chr7.1:85278574-85278593 | None:intergenic | 35.0% | |
| TGACAAAGAAGAACATTACC+AGG | - | chr7.1:85278352-85278371 | None:intergenic | 35.0% | |
| TTTGTTTGTACATGATGCTG+TGG | + | chr7.1:85278669-85278688 | MS.gene91524:intron | 35.0% | |
| ! | CAATTTTGTGAGGGACAATA+AGG | - | chr7.1:85279407-85279426 | None:intergenic | 35.0% |
| !!! | TGTTGTTTTAGGTGGAAAGT+TGG | + | chr7.1:85278487-85278506 | MS.gene91524:intron | 35.0% |
| AAACTTAGACGCTGTGTGAT+AGG | - | chr7.1:85279503-85279522 | None:intergenic | 40.0% | |
| ACAACTAAGAAGAGAGCTAG+TGG | + | chr7.1:85278518-85278537 | MS.gene91524:CDS | 40.0% | |
| ATAGCGTCAAAGGTCATAGT+TGG | - | chr7.1:85279316-85279335 | None:intergenic | 40.0% | |
| CTAGACCTCTTGTATTCAGT+AGG | - | chr7.1:85279786-85279805 | None:intergenic | 40.0% | |
| CTTCACAAACACAGCTGAAT+TGG | - | chr7.1:85279197-85279216 | None:intergenic | 40.0% | |
| TATTCAGTAGGTCTCAAGTG+TGG | - | chr7.1:85279774-85279793 | None:intergenic | 40.0% | |
| TGAGACCTACTGAATACAAG+AGG | + | chr7.1:85279778-85279797 | MS.gene91524:CDS | 40.0% | |
| TTACTGGAAAGAGGATCCAA+GGG | + | chr7.1:85278555-85278574 | MS.gene91524:CDS | 40.0% | |
| TTTCCAGTAACAGGACACTT+AGG | - | chr7.1:85278545-85278564 | None:intergenic | 40.0% | |
| TTTGTGAGGGACAATAAGGA+CGG | - | chr7.1:85279403-85279422 | None:intergenic | 40.0% | |
| !!! | GCTTATGGAGGTGTTTTATC+CGG | + | chr7.1:85279837-85279856 | MS.gene91524:CDS | 40.0% |
| !!! | TCATTGCTTTTTCTCCCTGA+TGG | + | chr7.1:85279657-85279676 | MS.gene91524:intron | 40.0% |
| !!! | TGGGTTTGTGTTGTTTTAGG+TGG | + | chr7.1:85278479-85278498 | MS.gene91524:intron | 40.0% |
| ACAAGAGGTCTAGATTGCCT+AGG | + | chr7.1:85279793-85279812 | MS.gene91524:CDS | 45.0% | |
| ACTGTTAACAGGGCTTATGG+AGG | + | chr7.1:85279825-85279844 | MS.gene91524:CDS | 45.0% | |
| AGTGCATGTCATGACCATCA+GGG | - | chr7.1:85279674-85279693 | None:intergenic | 45.0% | |
| AGTGTCCTGTTACTGGAAAG+AGG | + | chr7.1:85278546-85278565 | MS.gene91524:CDS | 45.0% | |
| CATAAGCCCTGTTAACAGTG+CGG | - | chr7.1:85279824-85279843 | None:intergenic | 45.0% | |
| CTTAACAACACGATGCTGGT+TGG | - | chr7.1:85278326-85278345 | None:intergenic | 45.0% | |
| GTGTCTTAACAACACGATGC+TGG | - | chr7.1:85278330-85278349 | None:intergenic | 45.0% | |
| GTTACTGGAAAGAGGATCCA+AGG | + | chr7.1:85278554-85278573 | MS.gene91524:CDS | 45.0% | |
| TACTGGAAAGAGGATCCAAG+GGG | + | chr7.1:85278556-85278575 | MS.gene91524:CDS | 45.0% | |
| TGGATCCTCTTTCCAGTAAC+AGG | - | chr7.1:85278554-85278573 | None:intergenic | 45.0% | |
| TTCAGAGACTCACATACCGT+AGG | + | chr7.1:85278278-85278297 | MS.gene91524:CDS | 45.0% | |
| TTTATCCGGAGGAGCTGTTA+GGG | + | chr7.1:85279851-85279870 | MS.gene91524:CDS | 45.0% | |
| ! | AACACGATGCTGGTTGGATT+TGG | - | chr7.1:85278320-85278339 | None:intergenic | 45.0% |
| ! | CATCGTGTTGTTAAGACACC+TGG | + | chr7.1:85278331-85278350 | MS.gene91524:CDS | 45.0% |
| ! | TTTTATCCGGAGGAGCTGTT+AGG | + | chr7.1:85279850-85279869 | MS.gene91524:CDS | 45.0% |
| !!! | TATGGAGGTGTTTTATCCGG+AGG | + | chr7.1:85279840-85279859 | MS.gene91524:CDS | 45.0% |
| CGCACTGTTAACAGGGCTTA+TGG | + | chr7.1:85279822-85279841 | MS.gene91524:CDS | 50.0% | |
| GAGTGCATGTCATGACCATC+AGG | - | chr7.1:85279675-85279694 | None:intergenic | 50.0% | |
| GGACCTAAGTGTCCTGTTAC+TGG | + | chr7.1:85278539-85278558 | MS.gene91524:CDS | 50.0% | |
| GTCTCAAGTGTGGAATCTGC+AGG | - | chr7.1:85279764-85279783 | None:intergenic | 50.0% | |
| TGGCATAGCTGTGTCTCCTA+CGG | - | chr7.1:85278297-85278316 | None:intergenic | 50.0% | |
| ! | ACGATGCTGGTTGGATTTGG+TGG | - | chr7.1:85278317-85278336 | None:intergenic | 50.0% |
| AAGCCCTGTTAACAGTGCGG+CGG | - | chr7.1:85279821-85279840 | None:intergenic | 55.0% | |
| GAACCGCCGCACTGTTAACA+GGG | + | chr7.1:85279815-85279834 | MS.gene91524:CDS | 55.0% | |
| TTAACAGTGCGGCGGTTCCT+AGG | - | chr7.1:85279813-85279832 | None:intergenic | 55.0% | |
| GGAACCGCCGCACTGTTAAC+AGG | + | chr7.1:85279814-85279833 | MS.gene91524:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 85278274 | 85279877 | 85278274 | ID=MS.gene91524 |
| chr7.1 | mRNA | 85278274 | 85279877 | 85278274 | ID=MS.gene91524.t1;Parent=MS.gene91524 |
| chr7.1 | exon | 85278274 | 85278352 | 85278274 | ID=MS.gene91524.t1.exon1;Parent=MS.gene91524.t1 |
| chr7.1 | CDS | 85278274 | 85278352 | 85278274 | ID=cds.MS.gene91524.t1;Parent=MS.gene91524.t1 |
| chr7.1 | exon | 85278498 | 85278577 | 85278498 | ID=MS.gene91524.t1.exon2;Parent=MS.gene91524.t1 |
| chr7.1 | CDS | 85278498 | 85278577 | 85278498 | ID=cds.MS.gene91524.t1;Parent=MS.gene91524.t1 |
| chr7.1 | exon | 85279768 | 85279877 | 85279768 | ID=MS.gene91524.t1.exon3;Parent=MS.gene91524.t1 |
| chr7.1 | CDS | 85279768 | 85279877 | 85279768 | ID=cds.MS.gene91524.t1;Parent=MS.gene91524.t1 |
| Gene Sequence |
| Protein sequence |
