AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61100.t1 MTR_4g063600 99.422 346 1 1 1 346 1 345 0.0 708
MS.gene61100.t1 MTR_4g063600 98.555 346 1 2 1 346 1 342 0.0 696
MS.gene61100.t1 MTR_2g096660 90.000 350 30 1 1 345 1 350 0.0 655
MS.gene61100.t1 MTR_4g120030 72.964 307 77 2 34 340 112 412 2.40e-165 468
MS.gene61100.t1 MTR_1g088480 71.293 317 85 2 30 346 115 425 7.10e-165 467
MS.gene61100.t1 MTR_1g067530 62.941 340 93 2 33 340 112 450 1.78e-150 432
MS.gene61100.t1 MTR_1g107455 29.060 351 191 13 33 329 19 365 9.57e-28 112
MS.gene61100.t1 MTR_4g056100 27.954 347 200 12 33 329 19 365 2.13e-27 111
MS.gene61100.t1 MTR_2g073240 28.939 311 198 10 35 329 21 324 9.43e-27 111
MS.gene61100.t1 MTR_7g115080 28.025 314 200 10 33 331 29 331 1.18e-26 108
MS.gene61100.t1 MTR_7g115080 28.025 314 200 10 33 331 63 365 1.54e-26 109
MS.gene61100.t1 MTR_7g115080 28.205 312 198 10 33 329 42 342 1.58e-26 108
MS.gene61100.t1 MTR_0034s0060 28.296 311 200 10 35 329 139 442 5.55e-26 109
MS.gene61100.t1 MTR_1g080950 27.832 309 208 9 33 331 28 331 7.40e-25 103
MS.gene61100.t1 MTR_1g080950 27.832 309 208 9 33 331 64 367 1.26e-24 103
MS.gene61100.t1 MTR_1g009600 27.273 319 209 10 35 337 7 318 2.07e-24 104
MS.gene61100.t1 MTR_4g056100 28.522 291 171 10 33 286 19 309 8.21e-24 100
MS.gene61100.t1 MTR_1g108530 26.647 334 203 11 33 329 19 347 2.22e-23 99.8
MS.gene61100.t1 MTR_4g056100 28.736 261 153 8 33 260 19 279 7.20e-22 94.4
MS.gene61100.t1 MTR_5g011940 27.273 330 202 12 31 329 88 410 1.99e-21 95.1
MS.gene61100.t1 MTR_4g129820 26.807 332 203 13 30 329 92 415 2.56e-19 89.0
MS.gene61100.t1 MTR_3g084090 25.460 326 205 11 35 329 101 419 7.06e-19 87.8
MS.gene61100.t1 MTR_8g089180 25.501 349 220 11 15 329 53 395 1.89e-18 86.3
MS.gene61100.t1 MTR_8g089180 25.501 349 220 11 15 329 53 395 1.89e-18 86.3
MS.gene61100.t1 MTR_4g102270 26.048 334 201 13 31 329 91 413 7.28e-18 84.7
MS.gene61100.t1 MTR_0354s0040 25.893 336 201 14 30 329 79 402 1.53e-17 83.6
MS.gene61100.t1 MTR_2g032100 24.638 345 207 13 15 319 53 384 1.53e-17 83.6
MS.gene61100.t1 MTR_8g099535 28.182 330 199 13 31 327 2 326 1.98e-17 82.4
MS.gene61100.t1 MTR_4g024600 24.471 331 212 11 30 329 98 421 5.16e-17 82.0
MS.gene61100.t1 MTR_4g134490 27.434 339 198 17 29 327 19 349 4.84e-15 75.9
MS.gene61100.t1 MTR_8g096880 25.000 332 209 14 31 327 4 330 9.08e-14 72.0
MS.gene61100.t1 MTR_8g096880 24.923 325 204 14 31 320 4 323 7.03e-13 68.9
MS.gene61100.t1 MTR_5g009170 25.893 336 209 13 26 327 40 369 2.63e-12 67.8
MS.gene61100.t1 MTR_2g041340 27.778 216 133 7 33 232 19 227 2.67e-12 65.9
MS.gene61100.t1 MTR_7g108490 24.138 319 209 10 26 329 6 306 4.00e-12 66.6
MS.gene61100.t1 MTR_7g108490 24.138 319 209 10 26 329 7 307 4.34e-12 66.6
MS.gene61100.t1 MTR_2g032100 26.761 213 124 9 15 208 53 252 3.72e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61100.t1 AT3G46440 89.971 339 34 0 6 344 2 340 0.0 626
MS.gene61100.t1 AT3G46440 89.971 339 34 0 6 344 2 340 0.0 626
MS.gene61100.t1 AT2G28760 88.696 345 37 1 1 345 32 374 0.0 625
MS.gene61100.t1 AT2G28760 88.696 345 37 1 1 345 1 343 0.0 624
MS.gene61100.t1 AT2G28760 88.696 345 37 1 1 345 1 343 0.0 624
MS.gene61100.t1 AT2G28760 88.696 345 37 1 1 345 1 343 0.0 624
MS.gene61100.t1 AT5G59290 87.647 340 42 0 5 344 17 356 0.0 619
MS.gene61100.t1 AT5G59290 87.647 340 42 0 5 344 2 341 0.0 617
MS.gene61100.t1 AT5G59290 91.054 313 28 0 32 344 22 334 0.0 603
MS.gene61100.t1 AT5G59290 91.026 312 28 0 33 344 1 312 0.0 601
MS.gene61100.t1 AT2G47650 72.611 314 85 1 33 346 121 433 3.35e-169 478
MS.gene61100.t1 AT3G62830 71.924 317 88 1 30 346 116 431 1.44e-168 477
MS.gene61100.t1 AT3G62830 71.924 317 88 1 30 346 116 431 1.44e-168 477
MS.gene61100.t1 AT2G47650 71.250 320 85 2 33 346 121 439 2.20e-166 472
MS.gene61100.t1 AT3G53520 71.061 311 89 1 30 340 117 426 1.12e-164 467
MS.gene61100.t1 AT3G53520 70.740 311 88 2 30 340 117 424 5.99e-162 460
MS.gene61100.t1 AT3G53520 64.583 336 91 3 30 340 117 449 4.40e-154 441
MS.gene61100.t1 AT3G53520 74.775 222 55 1 30 251 117 337 5.42e-121 353
MS.gene61100.t1 AT1G08200 29.107 347 196 12 33 329 18 364 3.49e-30 119
MS.gene61100.t1 AT2G27860 28.818 347 197 12 33 329 18 364 3.42e-29 116
MS.gene61100.t1 AT1G78570 28.754 313 196 10 35 329 9 312 2.39e-26 110
MS.gene61100.t1 AT3G14790 28.435 313 197 10 35 329 12 315 8.03e-26 108
MS.gene61100.t1 AT3G14790 28.435 313 197 10 35 329 9 312 8.07e-26 108
MS.gene61100.t1 AT1G53500 27.476 313 200 10 35 329 11 314 1.72e-25 107
MS.gene61100.t1 AT5G28840 28.065 310 208 9 32 331 27 331 3.52e-25 105
MS.gene61100.t1 AT5G28840 28.065 310 208 9 32 331 27 331 3.52e-25 105
MS.gene61100.t1 AT2G28755 70.175 57 17 0 249 305 4 60 6.23e-22 88.2
MS.gene61100.t1 AT4G20460 24.496 347 222 10 17 329 54 394 6.52e-19 87.4
MS.gene61100.t1 AT2G45310 25.071 351 217 12 14 329 78 417 9.36e-19 87.4
MS.gene61100.t1 AT5G44480 24.556 338 202 11 25 322 63 387 3.30e-18 85.5
MS.gene61100.t1 AT5G44480 24.556 338 202 11 25 322 63 387 3.30e-18 85.5
MS.gene61100.t1 AT5G44480 24.556 338 202 11 25 322 63 387 3.30e-18 85.5
MS.gene61100.t1 AT5G44480 24.556 338 202 11 25 322 87 411 3.81e-18 85.5
MS.gene61100.t1 AT3G23820 25.210 357 204 13 10 329 102 432 5.28e-17 82.0
MS.gene61100.t1 AT4G00110 24.545 330 203 12 35 329 93 411 1.26e-16 80.9
MS.gene61100.t1 AT1G30620 25.143 350 220 11 15 329 53 395 1.54e-16 80.5
MS.gene61100.t1 AT1G30620 25.143 350 220 11 15 329 53 395 1.54e-16 80.5
MS.gene61100.t1 AT1G30620 25.143 350 220 11 15 329 53 395 1.54e-16 80.5
MS.gene61100.t1 AT1G30620 25.143 350 220 11 15 329 53 395 1.54e-16 80.5
MS.gene61100.t1 AT1G02000 23.881 335 209 12 30 329 89 412 1.90e-16 80.5
MS.gene61100.t1 AT1G30620 25.429 350 219 11 15 329 52 394 2.73e-16 79.7
MS.gene61100.t1 AT4G12250 25.602 332 207 13 30 329 93 416 5.94e-16 79.0
MS.gene61100.t1 AT4G23920 27.607 326 198 12 35 327 5 325 1.15e-15 77.4
MS.gene61100.t1 AT4G30440 23.780 328 212 10 33 329 88 408 6.31e-14 72.8
MS.gene61100.t1 AT1G73250 24.684 316 210 7 26 329 10 309 1.24e-13 71.2
MS.gene61100.t1 AT4G10960 26.380 326 202 12 35 327 6 326 2.31e-13 70.9
MS.gene61100.t1 AT1G64440 26.426 333 193 13 35 327 5 325 1.98e-11 64.7
MS.gene61100.t1 AT1G17890 23.899 318 210 9 26 329 5 304 2.71e-11 64.3
MS.gene61100.t1 AT1G17890 23.899 318 210 9 26 329 5 304 2.71e-11 64.3
MS.gene61100.t1 AT1G17890 23.899 318 210 9 26 329 13 312 3.38e-11 63.9

Find 101 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCGTTTCTCCAAGTTCTTTC+AGG 0.199352 4.4:+42483858 MS.gene61100:CDS
ACATTGCCCCAATAGCTTTC+AGG 0.235265 4.4:-42485950 None:intergenic
AAACTGCGAGTTTGCGTTCC+TGG 0.265729 4.4:-42486640 None:intergenic
TCCTTTGCTTTGGTTATGTC+TGG 0.301398 4.4:-42487242 None:intergenic
GGATTATATTTGTAGAAAAT+AGG 0.307972 4.4:-42485423 None:intergenic
TTTAATGTCCCTTAGGTTGA+TGG 0.310321 4.4:+42486762 MS.gene61100:intron
ACATCAACTTCAGAGGTATA+TGG 0.326566 4.4:+42485905 MS.gene61100:CDS
ACTATCTTTATCTCCACATT+TGG 0.333705 4.4:-42487185 None:intergenic
TCCCCAACCTGAAAGCTATT+GGG 0.342073 4.4:+42485943 MS.gene61100:CDS
CCTGGGTTGCCAAGATTGAT+TGG 0.357256 4.4:-42486819 None:intergenic
GCAAGAATCTTCAACACATA+TGG 0.358114 4.4:+42486426 MS.gene61100:CDS
GCCCCAATAGCTTTCAGGTT+GGG 0.358874 4.4:-42485945 None:intergenic
TTTCTCTGTCTTGGATCATC+AGG 0.361145 4.4:-42487218 None:intergenic
TGGGGCAATGTTAACCCTAT+TGG 0.365765 4.4:+42485962 MS.gene61100:CDS
AACATGAGAATCTTGGTTAC+TGG 0.366684 4.4:+42484791 MS.gene61100:CDS
GCCAAGCAATTCCTTTGCTT+TGG 0.366826 4.4:-42487252 None:intergenic
ATCCCCAACCTGAAAGCTAT+TGG 0.371953 4.4:+42485942 MS.gene61100:CDS
CTTTGATGTTTGATTATCAT+AGG 0.378515 4.4:+42486269 MS.gene61100:CDS
TCACCTTGTCGATAGATTGA+TGG 0.379182 4.4:+42484835 MS.gene61100:CDS
CCTTCACTCAGCTTGACCTT+TGG 0.382651 4.4:-42487281 None:intergenic
CATCAACTTCAGAGGTATAT+GGG 0.387261 4.4:+42485906 MS.gene61100:CDS
CCCCAATAGCTTTCAGGTTG+GGG 0.394432 4.4:-42485944 None:intergenic
TTCAGGTGAATTCACGATGA+TGG 0.402808 4.4:+42486920 MS.gene61100:intron
GTTGCTGATAACTTCTTCAC+TGG 0.405680 4.4:+42485044 MS.gene61100:CDS
GGAGATTTCCGTTTGAGGCT+TGG 0.416400 4.4:+42487320 MS.gene61100:CDS
ATCTTGGTTACTGGAGGAGC+TGG 0.420013 4.4:+42484800 MS.gene61100:CDS
TTGGCACTCTGAACATGCTT+GGG 0.428559 4.4:+42485748 MS.gene61100:CDS
TATCATAGGCAACATGGAAT+AGG 0.430209 4.4:+42486283 MS.gene61100:CDS
AAGCAAAGGAATTGCTTGGC+TGG 0.433406 4.4:+42487255 MS.gene61100:CDS
TTGAGTTACCTGAAAGAACT+TGG 0.433833 4.4:-42483866 None:intergenic
TCAGAGGTCTTTGCAATGGC+AGG 0.439922 4.4:+42483775 None:intergenic
ATTGGCACTCTGAACATGCT+TGG 0.441893 4.4:+42485747 MS.gene61100:CDS
TGACGGATAAGTTCAAATCT+TGG 0.447891 4.4:-42485101 None:intergenic
AGGAGGCTGCTTAGCTGTTG+TGG 0.458824 4.4:-42483821 None:intergenic
GATAAAAGAACGTACCAATA+GGG 0.459006 4.4:-42485976 None:intergenic
GAGTTTGCGTTCCTGGCGCT+TGG 0.464935 4.4:-42486633 None:intergenic
GACACTGGTCCAATCAATCT+TGG 0.466228 4.4:+42486810 MS.gene61100:CDS
TGGAAGGAGATTTCCGTTTG+AGG 0.468564 4.4:+42487315 MS.gene61100:CDS
ATAGTCTAACATGAGAATCT+TGG 0.477476 4.4:+42484784 MS.gene61100:intron
TCCTTGACTGTCCAAGCGCC+AGG 0.479424 4.4:+42486622 MS.gene61100:CDS
TTGTAGAAAATAGGAGATGC+GGG 0.480312 4.4:-42485414 None:intergenic
CTTGGGCTTGCAAAGAGAGT+TGG 0.480768 4.4:+42485765 MS.gene61100:CDS
CGCAGGGGAGATGGCAAAGG+AGG 0.489358 4.4:-42483838 None:intergenic
GAGTGAAGGTCTTCCTCTCA+TGG 0.489967 4.4:+42487295 MS.gene61100:CDS
TGATGGCCTTATCCGTCTCA+TGG 0.493071 4.4:+42486779 MS.gene61100:CDS
ACAATAAAGACAAATGTGAT+TGG 0.494499 4.4:+42485729 MS.gene61100:CDS
ATGGCAGGGAATTCTTCTAA+TGG 0.497671 4.4:+42483790 MS.gene61100:CDS
AGCAAAGGAATTGCTTGGCT+GGG 0.500005 4.4:+42487256 MS.gene61100:CDS
ATCCTCCCATGAGACGGATA+AGG 0.500920 4.4:-42486785 None:intergenic
AAACGCAGGGGAGATGGCAA+AGG 0.502480 4.4:-42483841 None:intergenic
AAATGTGGAGATAAAGATAG+TGG 0.505212 4.4:+42487187 MS.gene61100:CDS
TGTCAACTCCAAGCCTCAAA+CGG 0.507833 4.4:-42487328 None:intergenic
TTGGAGAAACGCAGGGGAGA+TGG 0.512183 4.4:-42483847 None:intergenic
CAAGAATCTTCAACACATAT+GGG 0.513301 4.4:+42486427 MS.gene61100:CDS
AGACATTATCATACCTTCAC+AGG 0.514773 4.4:-42485444 None:intergenic
TGCCCCAATAGCTTTCAGGT+TGG 0.536093 4.4:-42485946 None:intergenic
CCTCGCATGAATATCGATGA+TGG 0.536367 4.4:+42486450 MS.gene61100:CDS
TCCTGGCGCTTGGACAGTCA+AGG 0.536722 4.4:-42486623 None:intergenic
ACCAAAGCAAAGGAATTGCT+TGG 0.538585 4.4:+42487251 MS.gene61100:CDS
CACTGAGACTTTGATGATTG+AGG 0.539187 4.4:+42485365 MS.gene61100:CDS
ATAATCAAACATCAAAGTCT+CGG 0.547377 4.4:-42486263 None:intergenic
TCAGGTTGGGGATGCTCAAG+AGG 0.553589 4.4:-42485932 None:intergenic
AGATTTGAACTTATCCGTCA+TGG 0.559399 4.4:+42485104 MS.gene61100:CDS
GATGGAAAATGAAAAGAATG+AGG 0.564416 4.4:+42484853 MS.gene61100:CDS
CAGAGGTCTTTGCAATGGCA+GGG 0.566681 4.4:+42483776 None:intergenic
CGGAAATCTCCTTCCATGAG+AGG 0.568379 4.4:-42487308 None:intergenic
GATGGCCTTATCCGTCTCAT+GGG 0.568978 4.4:+42486780 MS.gene61100:CDS
CTACAAATATAATCCTGTGA+AGG 0.580364 4.4:+42485431 MS.gene61100:CDS
CCCCAACCTGAAAGCTATTG+GGG 0.582436 4.4:+42485944 MS.gene61100:CDS
GAAAGAACTTGGAGAAACGC+AGG 0.583091 4.4:-42483855 None:intergenic
TTTGCTTACATCAACTTCAG+AGG 0.585158 4.4:+42485898 MS.gene61100:CDS
GAAGGTCTTCCTCTCATGGA+AGG 0.592285 4.4:+42487299 MS.gene61100:CDS
GTTCGTAGCTGCTATGACGA+GGG 0.592450 4.4:+42486229 MS.gene61100:CDS
GCAGCTTATTAATCCAAATG+TGG 0.592641 4.4:+42487172 MS.gene61100:intron
GGCCTTATCCGTCTCATGGG+AGG 0.595699 4.4:+42486783 MS.gene61100:CDS
TAACTTCTTCACTGGATCGA+AGG 0.596587 4.4:+42485052 MS.gene61100:CDS
ATTGCTTGGCTGGGAACCAA+AGG 0.597155 4.4:+42487265 MS.gene61100:CDS
TTTGATTATCATAGGCAACA+TGG 0.598463 4.4:+42486277 MS.gene61100:CDS
GAGATGCGGGGCATGCGAGA+TGG 0.598472 4.4:-42485401 None:intergenic
CCAATCAATCTTGGCAACCC+AGG 0.598660 4.4:+42486819 MS.gene61100:CDS
CCAAAGGTCAAGCTGAGTGA+AGG 0.601047 4.4:+42487281 MS.gene61100:CDS
ACCAGACATAACCAAAGCAA+AGG 0.602664 4.4:+42487241 MS.gene61100:CDS
TTTGTAGAAAATAGGAGATG+CGG 0.604591 4.4:-42485415 None:intergenic
AGTTCGTAGCTGCTATGACG+AGG 0.615229 4.4:+42486228 MS.gene61100:CDS
TTGCAAAGAGAGTTGGAGCA+AGG 0.617224 4.4:+42485772 MS.gene61100:CDS
TTTCTGCTATGTCTCTGACC+TGG 0.618172 4.4:+42486660 MS.gene61100:CDS
AAAGAACTTGGAGAAACGCA+GGG 0.625919 4.4:-42483854 None:intergenic
TGTCTGATCCTCCCATGAGA+CGG 0.626861 4.4:-42486791 None:intergenic
ATCAACTTCAGAGGTATATG+GGG 0.630585 4.4:+42485907 MS.gene61100:CDS
TGAGACTTTGATGATTGAGG+TGG 0.635484 4.4:+42485368 MS.gene61100:CDS
ATGAGAATCTTGGTTACTGG+AGG 0.635776 4.4:+42484794 MS.gene61100:CDS
ACTTGCTGAGACAGTGAAGG+AGG 0.645692 4.4:+42486944 MS.gene61100:CDS
TTCGTAGCTGCTATGACGAG+GGG 0.651810 4.4:+42486230 MS.gene61100:CDS
CTCATGGGAGGATCAGACAC+TGG 0.654323 4.4:+42486795 MS.gene61100:CDS
TTTCCATCAATCTATCGACA+AGG 0.663439 4.4:-42484838 None:intergenic
CTATGACGAGGGGAAACGTG+TGG 0.668216 4.4:+42486240 MS.gene61100:CDS
CCATCATCGATATTCATGCG+AGG 0.684477 4.4:-42486450 None:intergenic
GGAACTTGCTGAGACAGTGA+AGG 0.698005 4.4:+42486941 MS.gene61100:CDS
TGTAGAAAATAGGAGATGCG+GGG 0.699354 4.4:-42485413 None:intergenic
AAGAACTTGGAGAAACGCAG+GGG 0.748466 4.4:-42483853 None:intergenic
ACTTCATTGCTCAAGCACTG+CGG 0.763614 4.4:+42486487 MS.gene61100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATAACAATTCAAAA+AGG - chr4.4:42486872-42486891 None:intergenic 10.0%
!! AAAAAAAAACAAAGATTGAA+CGG - chr4.4:42486695-42486714 None:intergenic 15.0%
!! AATTATAAAATTTATTCCCA+AGG - chr4.4:42485810-42485829 None:intergenic 15.0%
!! GTAAACATATTAAATAAGAA+AGG - chr4.4:42486092-42486111 None:intergenic 15.0%
!! TTATAAAAAAGATTCATTCA+AGG - chr4.4:42484348-42484367 None:intergenic 15.0%
!! AAAAAAAACAAAGATTGAAC+GGG - chr4.4:42486694-42486713 None:intergenic 20.0%
!! AAACTTACTGATGTTAAATA+TGG + chr4.4:42487009-42487028 MS.gene61100:intron 20.0%
!! ACAAAATAACTAACTTAACA+CGG - chr4.4:42483989-42484008 None:intergenic 20.0%
!! ATAATATACTCGTAAGTATT+TGG - chr4.4:42485237-42485256 None:intergenic 20.0%
!! ATAATTGAGAAAAGATCATA+TGG + chr4.4:42484383-42484402 MS.gene61100:intron 20.0%
!! ATGTTAGTTCATTCTTATAA+TGG - chr4.4:42484747-42484766 None:intergenic 20.0%
!! GGATTATATTTGTAGAAAAT+AGG - chr4.4:42485426-42485445 None:intergenic 20.0%
!! TTATTACATGATTATGAATG+AGG + chr4.4:42484721-42484740 MS.gene61100:intron 20.0%
!!! AACTTAATTTTGTTCATAAC+AGG + chr4.4:42486205-42486224 MS.gene61100:intron 20.0%
!!! ATCTTTAAAAATCATAGCAA+CGG - chr4.4:42486044-42486063 None:intergenic 20.0%
!!! CATCTATTTTATCGAATTTA+GGG - chr4.4:42484966-42484985 None:intergenic 20.0%
!!! TGTTTTTAGATTAGCTAAAT+GGG - chr4.4:42484456-42484475 None:intergenic 20.0%
!!! TTAGTTCTTATTTTATTGAC+AGG + chr4.4:42485873-42485892 MS.gene61100:intron 20.0%
! AAAAAAAACTACGAAAACCA+CGG - chr4.4:42484012-42484031 None:intergenic 25.0%
! ACAATAAAGACAAATGTGAT+TGG + chr4.4:42485729-42485748 MS.gene61100:CDS 25.0%
! AGATAGTTGAATTGAAAAAG+TGG - chr4.4:42485138-42485157 None:intergenic 25.0%
! ATAATCAAACATCAAAGTCT+CGG - chr4.4:42486266-42486285 None:intergenic 25.0%
! CAATTGTAAAAATCTAACCT+GGG - chr4.4:42486839-42486858 None:intergenic 25.0%
! CTTTGATGTTTGATTATCAT+AGG + chr4.4:42486269-42486288 MS.gene61100:CDS 25.0%
! GGATATAATTTCATTTCAGA+AGG - chr4.4:42486023-42486042 None:intergenic 25.0%
! GTGTAAACAAAACAATGAAA+CGG - chr4.4:42486983-42487002 None:intergenic 25.0%
! TAATATCAACATCTTGAATC+AGG + chr4.4:42485016-42485035 MS.gene61100:intron 25.0%
! TCAATGATCGAAATTGATAA+CGG + chr4.4:42484581-42484600 MS.gene61100:intron 25.0%
! TCAATTGTAAAAATCTAACC+TGG - chr4.4:42486840-42486859 None:intergenic 25.0%
! TTAAATAAGAAAGGTCTTCA+AGG - chr4.4:42486083-42486102 None:intergenic 25.0%
! TTATAATTTCAGCTTCTACA+TGG + chr4.4:42485822-42485841 MS.gene61100:intron 25.0%
! TTCTCATTGAATTATACTAG+TGG + chr4.4:42486721-42486740 MS.gene61100:intron 25.0%
! TTTAACATCCATTCATTACA+CGG + chr4.4:42485537-42485556 MS.gene61100:intron 25.0%
!! AAGGTTAGAAATTTTTCCTT+GGG + chr4.4:42485791-42485810 MS.gene61100:intron 25.0%
!! GCATCTATTTTATCGAATTT+AGG - chr4.4:42484967-42484986 None:intergenic 25.0%
!! TCTTCAATTTGAAGTTTAGT+AGG + chr4.4:42484152-42484171 MS.gene61100:intron 25.0%
!! TGTTATCTGAAACTAAACTT+GGG + chr4.4:42487117-42487136 MS.gene61100:intron 25.0%
!!! AATCTTTTTTATAAGTCTCG+AGG + chr4.4:42484354-42484373 MS.gene61100:intron 25.0%
!!! AGAGCATTGATTTAGAAATA+GGG - chr4.4:42486546-42486565 None:intergenic 25.0%
!!! ATCTTTTTTATAAGTCTCGA+GGG + chr4.4:42484355-42484374 MS.gene61100:intron 25.0%
!!! CTGTTTTTAGATTAGCTAAA+TGG - chr4.4:42484457-42484476 None:intergenic 25.0%
!!! CTTAGTTCTGTTTTTCTTTA+TGG + chr4.4:42485846-42485865 MS.gene61100:intron 25.0%
!!! TAGAGCATTGATTTAGAAAT+AGG - chr4.4:42486547-42486566 None:intergenic 25.0%
!!! TATGTATTTTAATGTCCCTT+AGG + chr4.4:42486755-42486774 MS.gene61100:intron 25.0%
AAATGTGGAGATAAAGATAG+TGG + chr4.4:42487187-42487206 MS.gene61100:CDS 30.0%
ACACATTAGATAATCTCTCA+AGG - chr4.4:42485688-42485707 None:intergenic 30.0%
ACTATCTTTATCTCCACATT+TGG - chr4.4:42487188-42487207 None:intergenic 30.0%
ACTCAACCATTCATTTAGAT+TGG - chr4.4:42484510-42484529 None:intergenic 30.0%
AGATAAAAGAACGTACCAAT+AGG - chr4.4:42485980-42485999 None:intergenic 30.0%
ATAGTCTAACATGAGAATCT+TGG + chr4.4:42484784-42484803 MS.gene61100:intron 30.0%
ATGTTTACTTGCCAAGTAAA+CGG - chr4.4:42485489-42485508 None:intergenic 30.0%
ATTTCAGAAGGTCAATAAAC+AGG - chr4.4:42486011-42486030 None:intergenic 30.0%
CAAGAATCTTCAACACATAT+GGG + chr4.4:42486427-42486446 MS.gene61100:CDS 30.0%
CAGTTACCAATCTAAATGAA+TGG + chr4.4:42484501-42484520 MS.gene61100:intron 30.0%
CATTCAAGGATATAACAATG+AGG - chr4.4:42484334-42484353 None:intergenic 30.0%
CTACAAATATAATCCTGTGA+AGG + chr4.4:42485431-42485450 MS.gene61100:CDS 30.0%
CTTCAAGGTTTATTTAGTAC+AGG - chr4.4:42486068-42486087 None:intergenic 30.0%
GAAAAGACAGTTAGTTAAAC+TGG - chr4.4:42486570-42486589 None:intergenic 30.0%
GAAAAGATCATATGGATGTT+TGG + chr4.4:42484391-42484410 MS.gene61100:intron 30.0%
GAGAGATTATCTAATGTGTA+AGG + chr4.4:42485689-42485708 MS.gene61100:intron 30.0%
GATAAAAGAACGTACCAATA+GGG - chr4.4:42485979-42485998 None:intergenic 30.0%
GATGGAAAATGAAAAGAATG+AGG + chr4.4:42484853-42484872 MS.gene61100:CDS 30.0%
TAATCTAAAAACAGATTCCC+TGG + chr4.4:42484463-42484482 MS.gene61100:intron 30.0%
TCAATTTCAGAGGATAGATA+AGG - chr4.4:42484629-42484648 None:intergenic 30.0%
TTACAAAGCAAAACTTCTAC+AGG - chr4.4:42486365-42486384 None:intergenic 30.0%
TTGGAGATGTACTAAACAAA+TGG - chr4.4:42485218-42485237 None:intergenic 30.0%
TTTGATTATCATAGGCAACA+TGG + chr4.4:42486277-42486296 MS.gene61100:CDS 30.0%
TTTGTAGAAAATAGGAGATG+CGG - chr4.4:42485418-42485437 None:intergenic 30.0%
! CAAGGTTAGAAATTTTTCCT+TGG + chr4.4:42485790-42485809 MS.gene61100:intron 30.0%
! CTGTTATCTGAAACTAAACT+TGG + chr4.4:42487116-42487135 MS.gene61100:intron 30.0%
!! AAGTGGATTTTATACCATGA+CGG - chr4.4:42485121-42485140 None:intergenic 30.0%
!! CTTAACACGGTTTTATATCA+CGG - chr4.4:42483976-42483995 None:intergenic 30.0%
!! TAAGTTAGTTATTTTGTCCG+TGG + chr4.4:42483992-42484011 MS.gene61100:intron 30.0%
!! TGTTGTTCTCATTTGTTTTC+TGG + chr4.4:42483933-42483952 MS.gene61100:intron 30.0%
!!! TCTTTTTTATAAGTCTCGAG+GGG + chr4.4:42484356-42484375 MS.gene61100:intron 30.0%
AACATGAGAATCTTGGTTAC+TGG + chr4.4:42484791-42484810 MS.gene61100:CDS 35.0%
AACATGGAATAGGTAATTCC+TGG + chr4.4:42486293-42486312 MS.gene61100:intron 35.0%
AGAAGGTCAATAAACAGGTT+GGG - chr4.4:42486006-42486025 None:intergenic 35.0%
AGACATTATCATACCTTCAC+AGG - chr4.4:42485447-42485466 None:intergenic 35.0%
AGATTTGAACTTATCCGTCA+TGG + chr4.4:42485104-42485123 MS.gene61100:CDS 35.0%
ATTCAAATCAGTGTGTGACT+CGG + chr4.4:42485268-42485287 MS.gene61100:intron 35.0%
CTTTAATCAGACCGTTTACT+TGG + chr4.4:42485475-42485494 MS.gene61100:intron 35.0%
GACAACCTCAAAAAATGGAT+TGG + chr4.4:42485074-42485093 MS.gene61100:CDS 35.0%
GCAAGAATCTTCAACACATA+TGG + chr4.4:42486426-42486445 MS.gene61100:CDS 35.0%
GCAGCTTATTAATCCAAATG+TGG + chr4.4:42487172-42487191 MS.gene61100:intron 35.0%
TATCATAGGCAACATGGAAT+AGG + chr4.4:42486283-42486302 MS.gene61100:CDS 35.0%
TTGAGTTACCTGAAAGAACT+TGG - chr4.4:42483869-42483888 None:intergenic 35.0%
TTGTAGAAAATAGGAGATGC+GGG - chr4.4:42485417-42485436 None:intergenic 35.0%
TTTCCATCAATCTATCGACA+AGG - chr4.4:42484841-42484860 None:intergenic 35.0%
TTTGCTTACATCAACTTCAG+AGG + chr4.4:42485898-42485917 MS.gene61100:CDS 35.0%
! ACATCAACTTCAGAGGTATA+TGG + chr4.4:42485905-42485924 MS.gene61100:CDS 35.0%
! ATCAACTTCAGAGGTATATG+GGG + chr4.4:42485907-42485926 MS.gene61100:CDS 35.0%
! CATCAACTTCAGAGGTATAT+GGG + chr4.4:42485906-42485925 MS.gene61100:CDS 35.0%
! GTCTTTTCTAACGTAACCAT+TGG + chr4.4:42486582-42486601 MS.gene61100:intron 35.0%
! TACTGAGTTACACACTGATT+TGG - chr4.4:42485311-42485330 None:intergenic 35.0%
! TAGACATTTTTGTGAACCAG+AGG - chr4.4:42484655-42484674 None:intergenic 35.0%
! TGACGGATAAGTTCAAATCT+TGG - chr4.4:42485104-42485123 None:intergenic 35.0%
! TTCGATCATTGATTGCAGAT+CGG - chr4.4:42484573-42484592 None:intergenic 35.0%
!! TAACCATTGGTGTGTTTTAG+TGG + chr4.4:42486595-42486614 MS.gene61100:intron 35.0%
!! TTTAATGTCCCTTAGGTTGA+TGG + chr4.4:42486762-42486781 MS.gene61100:intron 35.0%
!!! CTTTTTTATAAGTCTCGAGG+GGG + chr4.4:42484357-42484376 MS.gene61100:intron 35.0%
!!! GATGACCAATCCATTTTTTG+AGG - chr4.4:42485082-42485101 None:intergenic 35.0%
AAAGAACTTGGAGAAACGCA+GGG - chr4.4:42483857-42483876 None:intergenic 40.0%
ACCAAAGCAAAGGAATTGCT+TGG + chr4.4:42487251-42487270 MS.gene61100:CDS 40.0%
ACCAGACATAACCAAAGCAA+AGG + chr4.4:42487241-42487260 MS.gene61100:CDS 40.0%
AGAATGTAGCGTTATGCATG+TGG - chr4.4:42485602-42485621 None:intergenic 40.0%
AGTCTCAGTGACATCTACAA+AGG - chr4.4:42485355-42485374 None:intergenic 40.0%
ATATCTGCTGCATCACTCAT+TGG + chr4.4:42485640-42485659 MS.gene61100:intron 40.0%
ATGAGAATCTTGGTTACTGG+AGG + chr4.4:42484794-42484813 MS.gene61100:CDS 40.0%
ATGGCAGGGAATTCTTCTAA+TGG + chr4.4:42483790-42483809 MS.gene61100:CDS 40.0%
ATTAAGAGGAACAGAAGACC+AGG - chr4.4:42486314-42486333 None:intergenic 40.0%
ATTGAACGGGACATATTACC+AGG - chr4.4:42486681-42486700 None:intergenic 40.0%
CAGAAGGTCAATAAACAGGT+TGG - chr4.4:42486007-42486026 None:intergenic 40.0%
CATCGTGAATTCACCTGAAA+AGG - chr4.4:42486919-42486938 None:intergenic 40.0%
CATTACACGGTCACTGAAAT+TGG + chr4.4:42485550-42485569 MS.gene61100:intron 40.0%
CGAAGGACAACCTCAAAAAA+TGG + chr4.4:42485069-42485088 MS.gene61100:CDS 40.0%
CGGCATGGTAATAGTAATAC+CGG + chr4.4:42484601-42484620 MS.gene61100:intron 40.0%
GAATGTAGCGTTATGCATGT+GGG - chr4.4:42485601-42485620 None:intergenic 40.0%
GGAGAACATAGCAGAAGAAA+AGG - chr4.4:42486525-42486544 None:intergenic 40.0%
GTCTCAGTGACATCTACAAA+GGG - chr4.4:42485354-42485373 None:intergenic 40.0%
GTTGCTGATAACTTCTTCAC+TGG + chr4.4:42485044-42485063 MS.gene61100:CDS 40.0%
TAACTTCTTCACTGGATCGA+AGG + chr4.4:42485052-42485071 MS.gene61100:CDS 40.0%
TATACCATACAGAGAACGAG+AGG - chr4.4:42486339-42486358 None:intergenic 40.0%
TCACCACTAAAACACACCAA+TGG - chr4.4:42486601-42486620 None:intergenic 40.0%
TCACCTTGTCGATAGATTGA+TGG + chr4.4:42484835-42484854 MS.gene61100:CDS 40.0%
TCAGAGGATAGATAAGGATC+CGG - chr4.4:42484623-42484642 None:intergenic 40.0%
TCCTTTGCTTTGGTTATGTC+TGG - chr4.4:42487245-42487264 None:intergenic 40.0%
TCTATATCGCTATTGCGTAG+CGG + chr4.4:42487033-42487052 MS.gene61100:intron 40.0%
TGTAGAAAATAGGAGATGCG+GGG - chr4.4:42485416-42485435 None:intergenic 40.0%
TGTAGCAAGTAGCACAAACA+CGG + chr4.4:42484037-42484056 MS.gene61100:intron 40.0%
TTCAGGTGAATTCACGATGA+TGG + chr4.4:42486920-42486939 MS.gene61100:intron 40.0%
TTCAGTGACCGTGTAATGAA+TGG - chr4.4:42485548-42485567 None:intergenic 40.0%
TTTCTCTGTCTTGGATCATC+AGG - chr4.4:42487221-42487240 None:intergenic 40.0%
! CACTGAGACTTTGATGATTG+AGG + chr4.4:42485365-42485384 MS.gene61100:CDS 40.0%
! GTGTTGACAATTGCAAATCG+TGG - chr4.4:42487080-42487099 None:intergenic 40.0%
! TGAGACTTTGATGATTGAGG+TGG + chr4.4:42485368-42485387 MS.gene61100:CDS 40.0%
! TGCAACACGTATTTCTGCAT+TGG - chr4.4:42486409-42486428 None:intergenic 40.0%
! TTGAGTCTCTTTGCCTTTTC+AGG + chr4.4:42486903-42486922 MS.gene61100:intron 40.0%
!! CCAGAGGTATTCAATTTCAG+AGG - chr4.4:42484639-42484658 None:intergenic 40.0%
!! CCTCTGAAATTGAATACCTC+TGG + chr4.4:42484636-42484655 MS.gene61100:intron 40.0%
!! GATCGAAATTGATAACGGCA+TGG + chr4.4:42484586-42484605 MS.gene61100:intron 40.0%
!!! ATGTCTGGTTTTCTCTGTCT+TGG - chr4.4:42487230-42487249 None:intergenic 40.0%
AAGAACTTGGAGAAACGCAG+GGG - chr4.4:42483856-42483875 None:intergenic 45.0%
AAGCAAAGGAATTGCTTGGC+TGG + chr4.4:42487255-42487274 MS.gene61100:CDS 45.0%
AAGTGACTGTGTAGTCACGT+GGG + chr4.4:42484101-42484120 MS.gene61100:intron 45.0%
ACATTGCCCCAATAGCTTTC+AGG - chr4.4:42485953-42485972 None:intergenic 45.0%
AGCAAAGGAATTGCTTGGCT+GGG + chr4.4:42487256-42487275 MS.gene61100:CDS 45.0%
ATCCCCAACCTGAAAGCTAT+TGG + chr4.4:42485942-42485961 MS.gene61100:CDS 45.0%
ATCTCCTCTCGTTCTCTGTA+TGG + chr4.4:42486332-42486351 MS.gene61100:intron 45.0%
ATTGGCACTCTGAACATGCT+TGG + chr4.4:42485747-42485766 MS.gene61100:CDS 45.0%
CCATCATCGATATTCATGCG+AGG - chr4.4:42486453-42486472 None:intergenic 45.0%
CCTCGCATGAATATCGATGA+TGG + chr4.4:42486450-42486469 MS.gene61100:CDS 45.0%
GAAAGAACTTGGAGAAACGC+AGG - chr4.4:42483858-42483877 None:intergenic 45.0%
GACACTGGTCCAATCAATCT+TGG + chr4.4:42486810-42486829 MS.gene61100:CDS 45.0%
GAGAACGAGAGGAGATTAAG+AGG - chr4.4:42486328-42486347 None:intergenic 45.0%
GCCAAGCAATTCCTTTGCTT+TGG - chr4.4:42487255-42487274 None:intergenic 45.0%
GCGTTTCTCCAAGTTCTTTC+AGG + chr4.4:42483858-42483877 MS.gene61100:CDS 45.0%
GGATAAGGCCATCAACCTAA+GGG - chr4.4:42486773-42486792 None:intergenic 45.0%
TCCCCAACCTGAAAGCTATT+GGG + chr4.4:42485943-42485962 MS.gene61100:CDS 45.0%
TGGAAGGAGATTTCCGTTTG+AGG + chr4.4:42487315-42487334 MS.gene61100:CDS 45.0%
TGGGGCAATGTTAACCCTAT+TGG + chr4.4:42485962-42485981 MS.gene61100:CDS 45.0%
TGTCAACTCCAAGCCTCAAA+CGG - chr4.4:42487331-42487350 None:intergenic 45.0%
TTGCAAAGAGAGTTGGAGCA+AGG + chr4.4:42485772-42485791 MS.gene61100:CDS 45.0%
TTGGCACTCTGAACATGCTT+GGG + chr4.4:42485748-42485767 MS.gene61100:CDS 45.0%
TTTCTGCTATGTCTCTGACC+TGG + chr4.4:42486660-42486679 MS.gene61100:CDS 45.0%
! ACTTCATTGCTCAAGCACTG+CGG + chr4.4:42486487-42486506 MS.gene61100:CDS 45.0%
!!! ACTGGAGGAGCTGGTTTTAT+TGG + chr4.4:42484809-42484828 MS.gene61100:CDS 45.0%
AAACTGCGAGTTTGCGTTCC+TGG - chr4.4:42486643-42486662 None:intergenic 50.0%
AGTTCGTAGCTGCTATGACG+AGG + chr4.4:42486228-42486247 MS.gene61100:CDS 50.0%
ATCCTCCCATGAGACGGATA+AGG - chr4.4:42486788-42486807 None:intergenic 50.0%
ATCTTGGTTACTGGAGGAGC+TGG + chr4.4:42484800-42484819 MS.gene61100:CDS 50.0%
ATTGCTTGGCTGGGAACCAA+AGG + chr4.4:42487265-42487284 MS.gene61100:CDS 50.0%
CCAAAGGTCAAGCTGAGTGA+AGG + chr4.4:42487281-42487300 MS.gene61100:CDS 50.0%
CCAATCAATCTTGGCAACCC+AGG + chr4.4:42486819-42486838 MS.gene61100:CDS 50.0%
CCCCAACCTGAAAGCTATTG+GGG + chr4.4:42485944-42485963 MS.gene61100:CDS 50.0%
CCTGGGTTGCCAAGATTGAT+TGG - chr4.4:42486822-42486841 None:intergenic 50.0%
CCTTCACTCAGCTTGACCTT+TGG - chr4.4:42487284-42487303 None:intergenic 50.0%
CGGAAATCTCCTTCCATGAG+AGG - chr4.4:42487311-42487330 None:intergenic 50.0%
CGGATAAGGCCATCAACCTA+AGG - chr4.4:42486774-42486793 None:intergenic 50.0%
CTTGGGCTTGCAAAGAGAGT+TGG + chr4.4:42485765-42485784 MS.gene61100:CDS 50.0%
GAAGGTCTTCCTCTCATGGA+AGG + chr4.4:42487299-42487318 MS.gene61100:CDS 50.0%
GAAGTGACTGTGTAGTCACG+TGG + chr4.4:42484100-42484119 MS.gene61100:intron 50.0%
GAGTGAAGGTCTTCCTCTCA+TGG + chr4.4:42487295-42487314 MS.gene61100:CDS 50.0%
GTTCGTAGCTGCTATGACGA+GGG + chr4.4:42486229-42486248 MS.gene61100:CDS 50.0%
TGCGTGACACAGTTACTCCA+GGG - chr4.4:42484483-42484502 None:intergenic 50.0%
TGTCTGATCCTCCCATGAGA+CGG - chr4.4:42486794-42486813 None:intergenic 50.0%
TTCGTAGCTGCTATGACGAG+GGG + chr4.4:42486230-42486249 MS.gene61100:CDS 50.0%
! ACTTGCTGAGACAGTGAAGG+AGG + chr4.4:42486944-42486963 MS.gene61100:CDS 50.0%
! GGAGATTTCCGTTTGAGGCT+TGG + chr4.4:42487320-42487339 MS.gene61100:CDS 50.0%
! TGCCCCAATAGCTTTCAGGT+TGG - chr4.4:42485949-42485968 None:intergenic 50.0%
!! CCCCAATAGCTTTCAGGTTG+GGG - chr4.4:42485947-42485966 None:intergenic 50.0%
!! GATGGCCTTATCCGTCTCAT+GGG + chr4.4:42486780-42486799 MS.gene61100:CDS 50.0%
!! GCCCCAATAGCTTTCAGGTT+GGG - chr4.4:42485948-42485967 None:intergenic 50.0%
!! GGAACTTGCTGAGACAGTGA+AGG + chr4.4:42486941-42486960 MS.gene61100:CDS 50.0%
!! TGATGGCCTTATCCGTCTCA+TGG + chr4.4:42486779-42486798 MS.gene61100:CDS 50.0%
AAACGCAGGGGAGATGGCAA+AGG - chr4.4:42483844-42483863 None:intergenic 55.0%
AGGAGGCTGCTTAGCTGTTG+TGG - chr4.4:42483824-42483843 None:intergenic 55.0%
CTATGACGAGGGGAAACGTG+TGG + chr4.4:42486240-42486259 MS.gene61100:CDS 55.0%
CTCATGGGAGGATCAGACAC+TGG + chr4.4:42486795-42486814 MS.gene61100:CDS 55.0%
CTGCGTGACACAGTTACTCC+AGG - chr4.4:42484484-42484503 None:intergenic 55.0%
GACTGTGTAGTCACGTGGGT+CGG + chr4.4:42484105-42484124 MS.gene61100:intron 55.0%
GCTGAGACAGTGAAGGAGGT+CGG + chr4.4:42486948-42486967 MS.gene61100:intron 55.0%
TTGGAGAAACGCAGGGGAGA+TGG - chr4.4:42483850-42483869 None:intergenic 55.0%
! GAGGTCGTAGCAAGCTCTGA+TGG - chr4.4:42484315-42484334 None:intergenic 55.0%
!! TCAGGTTGGGGATGCTCAAG+AGG - chr4.4:42485935-42485954 None:intergenic 55.0%
GAGTTTGCGTTCCTGGCGCT+TGG - chr4.4:42486636-42486655 None:intergenic 60.0%
GTAGTCACGTGGGTCGGTGT+CGG + chr4.4:42484111-42484130 MS.gene61100:intron 60.0%
TCCTGGCGCTTGGACAGTCA+AGG - chr4.4:42486626-42486645 None:intergenic 60.0%
TCCTTGACTGTCCAAGCGCC+AGG + chr4.4:42486622-42486641 MS.gene61100:CDS 60.0%
! GGCCTTATCCGTCTCATGGG+AGG + chr4.4:42486783-42486802 MS.gene61100:CDS 60.0%
CGCAGGGGAGATGGCAAAGG+AGG - chr4.4:42483841-42483860 None:intergenic 65.0%
GAGATGCGGGGCATGCGAGA+TGG - chr4.4:42485404-42485423 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 42483790 42487361 42483790 ID=MS.gene61100
chr4.4 mRNA 42483790 42487361 42483790 ID=MS.gene61100.t1;Parent=MS.gene61100
chr4.4 exon 42483790 42483879 42483790 ID=MS.gene61100.t1.exon1;Parent=MS.gene61100.t1
chr4.4 CDS 42483790 42483879 42483790 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
chr4.4 exon 42484788 42484874 42484788 ID=MS.gene61100.t1.exon2;Parent=MS.gene61100.t1
chr4.4 CDS 42484788 42484874 42484788 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
chr4.4 exon 42485038 42485125 42485038 ID=MS.gene61100.t1.exon3;Parent=MS.gene61100.t1
chr4.4 CDS 42485038 42485125 42485038 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
chr4.4 exon 42485361 42485452 42485361 ID=MS.gene61100.t1.exon4;Parent=MS.gene61100.t1
chr4.4 CDS 42485361 42485452 42485361 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
chr4.4 exon 42485729 42485793 42485729 ID=MS.gene61100.t1.exon5;Parent=MS.gene61100.t1
chr4.4 CDS 42485729 42485793 42485729 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
chr4.4 exon 42485895 42485983 42485895 ID=MS.gene61100.t1.exon6;Parent=MS.gene61100.t1
chr4.4 CDS 42485895 42485983 42485895 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
chr4.4 exon 42486227 42486304 42486227 ID=MS.gene61100.t1.exon7;Parent=MS.gene61100.t1
chr4.4 CDS 42486227 42486304 42486227 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
chr4.4 exon 42486415 42486508 42486415 ID=MS.gene61100.t1.exon8;Parent=MS.gene61100.t1
chr4.4 CDS 42486415 42486508 42486415 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
chr4.4 exon 42486615 42486681 42486615 ID=MS.gene61100.t1.exon9;Parent=MS.gene61100.t1
chr4.4 CDS 42486615 42486681 42486615 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
chr4.4 exon 42486777 42486840 42486777 ID=MS.gene61100.t1.exon10;Parent=MS.gene61100.t1
chr4.4 CDS 42486777 42486840 42486777 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
chr4.4 exon 42486925 42486965 42486925 ID=MS.gene61100.t1.exon11;Parent=MS.gene61100.t1
chr4.4 CDS 42486925 42486965 42486925 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
chr4.4 exon 42487176 42487361 42487176 ID=MS.gene61100.t1.exon12;Parent=MS.gene61100.t1
chr4.4 CDS 42487176 42487361 42487176 ID=cds.MS.gene61100.t1;Parent=MS.gene61100.t1
Gene Sequence

>MS.gene61100

ATGGCAGGGAATTCTTCTAATGGTGATCAATCCACAACAGCTAAGCAGCCTCCTTTGCCATCTCCCCTGCGTTTCTCCAAGTTCTTTCAGGTAACTCAATTCTTGTGTTTTTTTTTTTTTAATCAGAAATTTTCTTGCGACATTGTTGTTCTCATTTGTTTTCTGGATCAATCTGATATAAAACCGTGATATAAAACCGTGTTAAGTTAGTTATTTTGTCCGTGGTTTTCGTAGTTTTTTTTTTATTTGTAGCAAGTAGCACAAACACGGACACTGAACATGTAGATATTGATAATATTTTGAGAAAATTGAAGTGACTGTGTAGTCACGTGGGTCGGTGTCGGACACTAGACAATGACATATCTTCAATTTGAAGTTTAGTAGGTGCTACATAAGCTTCAATTTTTTATTTTTTGTATTTGTTGAATGTGATGATCATAATAAATACAACGAATAACTTAGCATTGTTTATGACTTTGTTCTTCTGTACTTGCATATCAGTGTAAACTTGAGAACATTGAACCATCAGAGCTTGCTACGACCTCATTGTTATATCCTTGAATGAATCTTTTTTATAAGTCTCGAGGGGGATGATAATTGAGAAAAGATCATATGGATGTTTGGTGTTTTTTTTTCAACTGATGAGTTAAACTCAAAGTTTTTCCCATTTAGCTAATCTAAAAACAGATTCCCTGGAGTAACTGTGTCACGCAGTTACCAATCTAAATGAATGGTTGAGTTTGTTTAAAATAGAGTTAGTGAATGTGTAATATGAGTCATCCGATCTGCAATCAATGATCGAAATTGATAACGGCATGGTAATAGTAATACCGGATCCTTATCTATCCTCTGAAATTGAATACCTCTGGTTCACAAAAATGTCTATGTGAAAATAGATGCATTTTATATGATATCATTGTTTGTTGAAATTTTATTACATGATTATGAATGAGGCCATTATAAGAATGAACTAACATTTTGTTCATTCTTGACAATAGTCTAACATGAGAATCTTGGTTACTGGAGGAGCTGGTTTTATTGGTTCTCACCTTGTCGATAGATTGATGGAAAATGAAAAGAATGAGGTCAGCTCGTTTTTCTTTTTGTTAATATTGTTGAAGTTATCATATTGTTTTTTCTACTGATTTTATGCTTCTTACGTAACATTATCAGCCCTAAATTCGATAAAATAGATGCATAATACAGCATGATCTTATCAACTTCATTAATATCAACATCTTGAATCAGGTCATTGTTGCTGATAACTTCTTCACTGGATCGAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAACTTATCCGTCATGGTATAAAATCCACTTTTTCAATTCAACTATCTTTGCGTAAAACTCTTGTGTTCATGTATCACATCGAACATTAATTTATTTATTTCGTTCCATTTGTTTAGTACATCTCCAAATACTTACGAGTATATTATGTTCAGCTTGCATTCAAATCAGTGTGTGACTCGGTAATGCTGATGAATTTGCCAAATCAGTGTGTAACTCAGTAATGCTGATGAATTTTCTGATCCCTTTGTAGATGTCACTGAGACTTTGATGATTGAGGTGGATCAGATCTACCATCTCGCATGCCCCGCATCTCCTATTTTCTACAAATATAATCCTGTGAAGGTATGATAATGTCTTATTTTGTCTTTAATCAGACCGTTTACTTGGCAAGTAAACATAGTCGTATCAACAATTGAAGAATTTACTTTTAACATCCATTCATTACACGGTCACTGAAATTGGCTGCTTCATATGAAAGAGCATAGAACCCACATGCATAACGCTACATTCTGCATTCTGCAGTATGTTTATATCTGCTGCATCACTCATTGGAATTTCTCTTTTTTCTAATGATCCTTGAGAGATTATCTAATGTGTAAGGAAATAATATTTATACAGACAATAAAGACAAATGTGATTGGCACTCTGAACATGCTTGGGCTTGCAAAGAGAGTTGGAGCAAGGTTAGAAATTTTTCCTTGGGAATAAATTTTATAATTTCAGCTTCTACATGGTCTTAGTTCTGTTTTTCTTTATGGAGTCTTAGTTCTTATTTTATTGACAGGATTTTGCTTACATCAACTTCAGAGGTATATGGGGATCCTCTTGAGCATCCCCAACCTGAAAGCTATTGGGGCAATGTTAACCCTATTGGTACGTTCTTTTATCTCATCCCAACCTGTTTATTGACCTTCTGAAATGAAATTATATCCGTTGCTATGATTTTTAAAGATACCTGTACTAAATAAACCTTGAAGACCTTTCTTATTTAATATGTTTACAGTATAATATAATTAACTTATTGTTTGATTATTCTTTCTCATGACAATAGTTATTCACTTAAGAAGCTAATATGAAAATGTAGCTTAACGAAGAACTTAATTTTGTTCATAACAGGAGTTCGTAGCTGCTATGACGAGGGGAAACGTGTGGCCGAGACTTTGATGTTTGATTATCATAGGCAACATGGAATAGGTAATTCCTGGTCTTCTGTTCCTCTTAATCTCCTCTCGTTCTCTGTATGGTATATAGCCTGTAGAAGTTTTGCTTTGTAATTTAAGAAGCTAATATCTTTTCCAATGCAGAAATACGTGTTGCAAGAATCTTCAACACATATGGGCCTCGCATGAATATCGATGATGGACGTGTTGTCAGCAACTTCATTGCTCAAGCACTGCGGTAATTAAACTTACCTTTTCTTCTGCTATGTTCTCCCTATTTCTAAATCAATGCTCTACCAGTTTAACTAACTGTCTTTTCTAACGTAACCATTGGTGTGTTTTAGTGGTGAATCCTTGACTGTCCAAGCGCCAGGAACGCAAACTCGCAGTTTCTGCTATGTCTCTGACCTGGTAATATGTCCCGTTCAATCTTTGTTTTTTTTTCTTTTTTTCTCATTGAATTATACTAGTGGTATGCTGATTTTATGTATTTTAATGTCCCTTAGGTTGATGGCCTTATCCGTCTCATGGGAGGATCAGACACTGGTCCAATCAATCTTGGCAACCCAGGTTAGATTTTTACAATTGATTTTCTTTGCCTTTTTGAATTGTTATATTTTTTATTTAATTGCTTGAGTCTCTTTGCCTTTTCAGGTGAATTCACGATGATGGAACTTGCTGAGACAGTGAAGGAGGTCGGTTCTTTTATCCGTTTCATTGTTTTGTTTACACACTTGTAAACTTACTGATGTTAAATATGGCTCTATATCGCTATTGCGTAGCGGTATACGAACAAACTGATGTTTCCACGATTTGCAATTGTCAACACAATTACAAGCAGTTAACTGTTATCTGAAACTAAACTTGGGAGATAATTTTGAATTAATGTTTTGTTTGATTTGCAGCTTATTAATCCAAATGTGGAGATAAAGATAGTGGAGAATACTCCTGATGATCCAAGACAGAGAAAACCAGACATAACCAAAGCAAAGGAATTGCTTGGCTGGGAACCAAAGGTCAAGCTGAGTGAAGGTCTTCCTCTCATGGAAGGAGATTTCCGTTTGAGGCTTGGAGTTGACAAGAAAGAATAA
Protein sequence

>MS.gene61100.t1

MAGNSSNGDQSTTAKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLKKWIGHPRFELIRHDVTETLMIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQAPGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMMELAETVKELINPNVEIKIVENTPDDPRQRKPDITKAKELLGWEPKVKLSEGLPLMEGDFRLRLGVDKKE